View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4510_low_2 (Length: 573)

Name: NF4510_low_2
Description: NF4510
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4510_low_2
NF4510_low_2
[»] chr4 (18 HSPs)
chr4 (1-554)||(32442392-32442933)
chr4 (1-83)||(27631875-27631957)
chr4 (1-96)||(41412708-41412804)
chr4 (1-72)||(34973438-34973509)
chr4 (5-76)||(55052201-55052272)
chr4 (1-83)||(6228323-6228405)
chr4 (1-45)||(49397589-49397633)
chr4 (1-76)||(31581963-31582038)
chr4 (1-79)||(17932650-17932727)
chr4 (15-83)||(23524376-23524444)
chr4 (1-76)||(25490897-25490972)
chr4 (1-76)||(25751962-25752037)
chr4 (1-51)||(2505568-2505618)
chr4 (5-51)||(38536762-38536808)
chr4 (1-75)||(40704510-40704584)
chr4 (1-51)||(46439823-46439873)
chr4 (5-66)||(29823166-29823227)
chr4 (3-51)||(48318623-48318671)
[»] chr3 (13 HSPs)
chr3 (1-98)||(8657694-8657792)
chr3 (1-157)||(2358049-2358203)
chr3 (1-83)||(3938756-3938838)
chr3 (5-98)||(47302577-47302671)
chr3 (1-76)||(46622317-46622392)
chr3 (1-76)||(52777787-52777862)
chr3 (1-66)||(39150351-39150416)
chr3 (1-80)||(500689-500768)
chr3 (1-76)||(38977262-38977337)
chr3 (1-51)||(35142647-35142697)
chr3 (116-154)||(43472713-43472751)
chr3 (4-50)||(47739477-47739523)
chr3 (5-66)||(26053262-26053323)
[»] chr2 (9 HSPs)
chr2 (1-98)||(36948611-36948709)
chr2 (4-76)||(16749956-16750028)
chr2 (1-76)||(32187392-32187467)
chr2 (1-76)||(44465262-44465337)
chr2 (1-51)||(8450866-8450916)
chr2 (1-51)||(33451995-33452045)
chr2 (116-154)||(36949211-36949249)
chr2 (1-51)||(41854433-41854483)
chr2 (1-66)||(45153423-45153488)
[»] chr1 (17 HSPs)
chr1 (1-83)||(32542783-32542865)
chr1 (1-83)||(23443302-23443384)
chr1 (1-83)||(33610909-33610991)
chr1 (5-83)||(44937797-44937875)
chr1 (1-96)||(49786851-49786947)
chr1 (1-79)||(7011784-7011862)
chr1 (1-49)||(34006836-34006884)
chr1 (1-51)||(45046402-45046452)
chr1 (1-51)||(52744395-52744445)
chr1 (1-98)||(45567394-45567491)
chr1 (5-76)||(17000886-17000957)
chr1 (1-76)||(32817321-32817396)
chr1 (5-76)||(34162303-34162374)
chr1 (5-76)||(40907444-40907515)
chr1 (116-153)||(18583815-18583852)
chr1 (1-49)||(667229-667277)
chr1 (116-152)||(49786969-49787005)
[»] chr8 (14 HSPs)
chr8 (1-83)||(21004888-21004970)
chr8 (1-83)||(31519394-31519476)
chr8 (1-76)||(14163563-14163638)
chr8 (1-76)||(42280414-42280489)
chr8 (1-75)||(8884966-8885040)
chr8 (1-75)||(9074100-9074174)
chr8 (1-66)||(3095260-3095325)
chr8 (116-152)||(41530519-41530555)
chr8 (1-76)||(11698641-11698716)
chr8 (1-75)||(11697833-11697907)
chr8 (1-51)||(34853887-34853937)
chr8 (5-51)||(34854275-34854321)
chr8 (1-51)||(40995229-40995279)
chr8 (116-153)||(31520151-31520188)
[»] chr7 (14 HSPs)
chr7 (1-83)||(47203056-47203138)
chr7 (1-96)||(8155467-8155563)
chr7 (1-77)||(18951379-18951455)
chr7 (1-83)||(3304253-3304335)
chr7 (1-83)||(31643616-31643698)
chr7 (1-79)||(42925149-42925227)
chr7 (30-79)||(33573563-33573612)
chr7 (1-49)||(24689877-24689925)
chr7 (1-76)||(3936554-3936629)
chr7 (1-76)||(9152354-9152429)
chr7 (1-64)||(36468075-36468138)
chr7 (1-76)||(42864616-42864691)
chr7 (1-62)||(24041718-24041779)
chr7 (4-76)||(37517777-37517849)
[»] chr6 (8 HSPs)
chr6 (1-83)||(32044791-32044873)
chr6 (1-76)||(4507818-4507893)
chr6 (1-51)||(5639672-5639722)
chr6 (1-47)||(3716836-3716882)
chr6 (1-66)||(13096735-13096800)
chr6 (1-65)||(7416354-7416418)
chr6 (1-76)||(7423479-7423554)
chr6 (5-51)||(1945115-1945161)
[»] chr5 (11 HSPs)
chr5 (1-76)||(38030773-38030848)
chr5 (1-79)||(31928636-31928714)
chr5 (1-73)||(26189833-26189905)
chr5 (5-76)||(4064309-4064380)
chr5 (5-76)||(6157900-6157971)
chr5 (1-76)||(33488143-33488218)
chr5 (5-75)||(12464620-12464690)
chr5 (1-79)||(20892145-20892223)
chr5 (1-66)||(29863092-29863157)
chr5 (1-66)||(37183311-37183376)
chr5 (4-76)||(31220852-31220924)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-79)||(173872-173950)
[»] scaffold0137 (1 HSPs)
scaffold0137 (1-76)||(9016-9091)
[»] scaffold0027 (1 HSPs)
scaffold0027 (1-79)||(141507-141585)


Alignment Details
Target: chr4 (Bit Score: 407; Significance: 0; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 407; E-Value: 0
Query Start/End: Original strand, 1 - 554
Target Start/End: Original strand, 32442392 - 32442933
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccgaaaacctaaagacatttttgaagg 100  Q
    ||||||| |||||||||| |||| |||  |||||||||||| ||||||||| || |||||||||||||||||| |||||||||||| ||||| ||| |      
T  32442392 atggctggttatacataagaattgtccagattataaaattcgaaatagtaaacatgattccggattatgaaattcgaaaacctaaatacattcttgga-- 32442489  T
Q  101 nnnnnnnnncgcagggcgcgagaatcctatagggtgagaaaaataatactcttttatttttccatttgtaatagtttttcaaaatataaataaaagctaa 200  Q
             ||||| ||||||  ||||||||||  | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  32442490 ----aaaaacgcagtgcgcga--atcctataggtag-gaaaaataatactcttttatttttccgtttgtaatagtttttcaaaatataaataaaagctaa 32442582  T
Q  201 aaacgcattttcaatccaattattatcaccgttatctatctactccacactacaacaacaatggagggagccttacttcccctctcttcaccttcaactt 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||    
T  32442583 aaacgcattttcaatccaattattatcaccgttatctatctactccacactacaa---caatggagggagccttacttcccctctcttcaccttcaactt 32442679  T
Q  301 cttcttccaaactcaaccaccgcttttgcttcccctcttcactactaaaccaccaccgttactctcacttccccaaattccttcccaaacccaaaattaa 400  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  32442680 cttcttccaaactcaaccaccgcttttgcttcccctcttcactactaaacaaccaccgttactctcacttccccaaattccttcccaaacccaaaattaa 32442779  T
Q  401 cacagttacttcatcaccgttatctcttaaatgctctctccgtggttccactttagcactcgacaaagacgaaacttctgtctcagaaataacagatacc 500  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  32442780 cacagttacttcatcaccgttatctcttaaatgctctctccgtggttccactttagcactcgacaaagacgaaacttctgtctcagaaataacagacacc 32442879  T
Q  501 tctccaatttctctgcctaaactcgataaaaccggccggttttgtagtcctaga 554  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32442880 tcttcaatttctctgcctaaactcgataaaaccggccggttttgtagtcctaga 32442933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 27631957 - 27631875
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccgaaaacct 83  Q
    |||||||||||||||||| |||| |||| |||||||||| | ||||||||| || ||||||||||||||||||| | ||||||    
T  27631957 atggctgattatacataagaattgtccggattataaaatccgaaatagtaaacatgattccggattatgaaatctggaaacct 27631875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 41412804 - 41412708
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccgaaaacctaaaga-catttttg 96  Q
    |||||||||||||||||| |||| |||| |||||||||| | ||||||||| || |||| | ||||||||||||| ||||||| |||| ||||||||    
T  41412804 atggctgattatacataagaattgtccggattataaaatccgaaatagtaaacatgatttcagattatgaaatccaaaaacctcaagagcatttttg 41412708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 34973438 - 34973509
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaa 72  Q
    |||||||||||||||||| |||| |||| |||||||||| | ||||||||| || |||||||||||||||||    
T  34973438 atggctgattatacataagaattgtccggattataaaatccgaaatagtaaacatgattccggattatgaaa 34973509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 55052272 - 55052201
Alignment:
Q  5 ctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccg 76  Q
    |||||||||||||| ||||||||| |||||||||| ||||||||||| || || |||||||| | |||||||    
T  55052272 ctgattatacataagaattatccggattataaaatccaaaatagtaaacatgaatccggattttaaaatccg 55052201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 6228405 - 6228323
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccgaaaacct 83  Q
    |||||||||||||||||| |||| |||| |||||||||| | | ||||||| || ||||  ||||||||||||||| ||||||    
T  6228405 atggctgattatacataagaattgtccggattataaaatccgagatagtaaacatgattatggattatgaaatccggaaacct 6228323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 49397589 - 49397633
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaa 45  Q
    |||||||||||||||||||||||||||||||||| |||| |||||    
T  49397589 atggctgattatacataaaaattatccgaattatgaaatccaaaa 49397633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 31582038 - 31581963
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccg 76  Q
    |||||||||||||||||| |||| |||| |||||||||| | ||||||||| || || |||||||| | |||||||    
T  31582038 atggctgattatacataagaattttccggattataaaatccgaaatagtaaacatgaatccggattttaaaatccg 31581963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 17932727 - 17932650
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccgaaa 79  Q
    |||||||||||||||||| |||| |||| |||||||||| | ||||||||| || || |||||||| | ||||||||||    
T  17932727 atggctgattatacataagaattgtccggattataaaatccgaaatagtaaacatgaatccggatt-ttaaatccgaaa 17932650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 23524376 - 23524444
Alignment:
Q  15 ataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccgaaaacct 83  Q
    ||||| ||| ||||||||||||||| | ||||||||| || ||||||||||||| ||||| | ||||||    
T  23524376 ataaagattgtccgaattataaaatccgaaatagtaaacatgattccggattataaaatctggaaacct 23524444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 25490972 - 25490897
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccg 76  Q
    |||||||||||||||||| |||| | || |||||||||| | ||||||||| || || |||||||| | |||||||    
T  25490972 atggctgattatacataagaattgttcggattataaaatccgaaatagtaaacatgaatccggattttaaaatccg 25490897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 25752037 - 25751962
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccg 76  Q
    |||||||||||||||||| |||| | || |||||||||| |||||| |||| || || |||||||| | |||||||    
T  25752037 atggctgattatacataagaattgttcggattataaaatccaaaattgtaaacatgaatccggattttaaaatccg 25751962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 2505618 - 2505568
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaa 51  Q
    |||||||||||||||||| |||||| || |||||||||| | |||||||||    
T  2505618 atggctgattatacataagaattattcggattataaaatccgaaatagtaa 2505568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 38536762 - 38536808
Alignment:
Q  5 ctgattatacataaaaattatccgaattataaaattcaaaatagtaa 51  Q
    |||||||||||||| ||||||||  |||||||||| |||||||||||    
T  38536762 ctgattatacataagaattatccagattataaaatccaaaatagtaa 38536808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 40704510 - 40704584
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatcc 75  Q
    |||||||||||||||||| | ||  ||| |||||||||| ||||||||||| || || |||||||| | ||||||    
T  40704510 atggctgattatacataagagttgcccggattataaaatccaaaatagtaaacatgaatccggattttaaaatcc 40704584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 46439873 - 46439823
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaa 51  Q
    |||||||||||||||||| |||| |||| |||||||||||  |||||||||    
T  46439873 atggctgattatacataagaattttccggattataaaatttgaaatagtaa 46439823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 29823166 - 29823227
Alignment:
Q  5 ctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggatt 66  Q
    ||||||||||||||  ||| |||| |||||||||| ||||||||||| || || ||||||||    
T  29823166 ctgattatacataaggattgtccggattataaaatccaaaatagtaaacatgaatccggatt 29823227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 48318671 - 48318623
Alignment:
Q  3 ggctgattatacataaaaattatccgaattataaaattcaaaatagtaa 51  Q
    |||||||||||||||| |||| |||| |||||||||| | |||||||||    
T  48318671 ggctgattatacataagaattgtccggattataaaatccgaaatagtaa 48318623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 2e-22; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 8657694 - 8657792
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccgaaaacct-aaagacatttttgaa 98  Q
    |||||||||||||||| | |||| |||| |||||||||| ||||||||||| || ||||||||||||||||||||| |||||| || ||||||||||||    
T  8657694 atggctgattatacatgagaattgtccggattataaaatccaaaatagtaaacatgattccggattatgaaatccggaaacctcaaggacatttttgaa 8657792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 2358203 - 2358049
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccgaaaacct-aaagacatttttgaag 99  Q
    |||||||||||||||||| |||| |||| |||||||||| | ||||||||| || ||||||||||||||||||||| |||||| || | |||||||| |     
T  2358203 atggctgattatacataagaattgtccggattataaaatccgaaatagtaaacatgattccggattatgaaatccggaaacctcaagggcatttttgga- 2358105  T
Q  100 gnnnnnnnnncgcagg---gcgcgagaatcctatagggtgagaaaaataatactcttttat 157  Q
              ||||||   ||||||||||||||||||||| ||||||||||||||||||||    
T  2358104 -----aaaaacgcaggggcgcgcgagaatcctatagggtgggaaaaataatactcttttat 2358049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 3938756 - 3938838
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccgaaaacct 83  Q
    |||||||||||||||||| |||| |||| |||||||||| | ||||||||| || ||||||||||||||||||||| ||||||    
T  3938756 atggctgattatacataagaattgtccggattataaaatccgaaatagtaaacatgattccggattatgaaatccggaaacct 3938838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 47302577 - 47302671
Alignment:
Q  5 ctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccgaaaacctaaag-acatttttgaa 98  Q
    ||||||||| |||| |||| |||| |||||||||||| ||||||||| || |||||| |||||||||||| | |||||| ||| |||||||||||    
T  47302577 ctgattatatataagaattgtccggattataaaattcgaaatagtaaacatgattccagattatgaaatctggaaacctcaagaacatttttgaa 47302671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 46622392 - 46622317
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccg 76  Q
    |||||||||||||||||| |||| ||||||||||||||| | ||||||||| || || |||||||| | |||||||    
T  46622392 atggctgattatacataagaattgtccgaattataaaatccgaaatagtaaacatgaatccggattttaaaatccg 46622317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 52777787 - 52777862
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccg 76  Q
    |||||||||||||||||| |||| ||||||||||||||| | ||||||||| || || || ||||| | |||||||    
T  52777787 atggctgattatacataagaattgtccgaattataaaatccgaaatagtaaacatgaatctggattttaaaatccg 52777862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 39150351 - 39150416
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggatt 66  Q
    |||| ||||||||||||| |||| |||| |||||||||| ||||||||||| || || ||||||||    
T  39150351 atggatgattatacataagaattgtccggattataaaatccaaaatagtaaacatgaatccggatt 39150416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 500768 - 500689
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccgaaaa 80  Q
    |||||||||||||||||| |||| |||  |||||||||| | ||||||||| ||  | |||||||| | |||||||||||    
T  500768 atggctgattatacataagaattgtccagattataaaatccgaaatagtaaacatcaatccggattttaaaatccgaaaa 500689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 38977337 - 38977262
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccg 76  Q
    |||| ||||||||||||| |||| |||| |||||||||| ||||||| ||| || || |||||||| | |||||||    
T  38977337 atggttgattatacataagaattgtccggattataaaatccaaaatattaaacatgaatccggattttaaaatccg 38977262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 35142647 - 35142697
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaa 51  Q
    |||||||||||| ||||| |||| ||||||||||||||| | |||||||||    
T  35142647 atggctgattatgcataagaattgtccgaattataaaatccgaaatagtaa 35142697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 43472751 - 43472713
Alignment:
Q  116 gcgcgagaatcctatagggtgagaaaaataatactcttt 154  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  43472751 gcgcgagaatcctatagggtgggaaaagtaatactcttt 43472713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 47739523 - 47739477
Alignment:
Q  4 gctgattatacataaaaattatccgaattataaaattcaaaatagta 50  Q
    ||||||||||||||| |||| |||| |||||||||| ||||||||||    
T  47739523 gctgattatacataagaattgtccggattataaaatccaaaatagta 47739477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 26053323 - 26053262
Alignment:
Q  5 ctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggatt 66  Q
    ||||||||| |||| |||| |||| |||||||||||| ||||||||| || || ||||||||    
T  26053323 ctgattataaataagaattgtccggattataaaattcgaaatagtaaacatgaatccggatt 26053262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 2e-22; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 36948709 - 36948611
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccgaaaacct-aaagacatttttgaa 98  Q
    |||||||||||||||||| |||| |||| |||||||||| | ||||||||| || |||||||||||||||||| ||||||||| || ||||||||||||    
T  36948709 atggctgattatacataagaattgtccggattataaaatccgaaatagtaaacatgattccggattatgaaattcgaaaacctcaaggacatttttgaa 36948611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 16750028 - 16749956
Alignment:
Q  4 gctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccg 76  Q
    ||||||||||||||| |||| |||| |||||||||||||||||||||| || || |||||||| | |||||||    
T  16750028 gctgattatacataagaattgtccggattataaaattcaaaatagtaaacatgaatccggattttaaaatccg 16749956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 32187467 - 32187392
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccg 76  Q
    |||||||||||||||||| |||| |||||||||||||||  |||||||||| || || |||||||| | |||||||    
T  32187467 atggctgattatacataagaattgtccgaattataaaatctaaaatagtaaacatgaatccggattttaaaatccg 32187392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 44465337 - 44465262
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccg 76  Q
    |||||||||||||||||| |||| |||| |||||||||||| ||||||||| || || |||| ||| | |||||||    
T  44465337 atggctgattatacataagaattgtccggattataaaattcgaaatagtaaacatgaatccgaattttaaaatccg 44465262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 8450866 - 8450916
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaa 51  Q
    |||||||||||||||||| |||| || |||||||||||| |||||||||||    
T  8450866 atggctgattatacataagaattgtctgaattataaaatccaaaatagtaa 8450916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 33452045 - 33451995
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaa 51  Q
    |||||||||||||||||| |||| |||| |||||||||| | |||||||||    
T  33452045 atggctgattatacataagaattgtccggattataaaatccgaaatagtaa 33451995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 36949211 - 36949249
Alignment:
Q  116 gcgcgagaatcctatagggtgagaaaaataatactcttt 154  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  36949211 gcgcgagaatcctatagggtgggaaaagtaatactcttt 36949249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 41854483 - 41854433
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaa 51  Q
    |||||||||||||||||| |||| ||||| ||||||||| | |||||||||    
T  41854483 atggctgattatacataagaattgtccgagttataaaatccgaaatagtaa 41854433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 45153488 - 45153423
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggatt 66  Q
    |||||||||||||||||| |||| | || |||||||||| |||||||| || || || ||||||||    
T  45153488 atggctgattatacataagaattgttcggattataaaatccaaaatagcaaacatgaatccggatt 45153423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 2e-22; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 32542783 - 32542865
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccgaaaacct 83  Q
    |||||||||||||||||| |||| |||| |||||||||| ||||||||||| || ||||||||||||||||||||| ||||||    
T  32542783 atggctgattatacataagaattgtccggattataaaatccaaaatagtaaacatgattccggattatgaaatccggaaacct 32542865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 23443302 - 23443384
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccgaaaacct 83  Q
    |||||||||||||||||| |||| |||| |||||||||| | ||||||||| || ||||| ||||||||||||||||||||||    
T  23443302 atggctgattatacataagaattgtccggattataaaatccgaaatagtaaacatgattctggattatgaaatccgaaaacct 23443384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 33610991 - 33610909
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccgaaaacct 83  Q
    |||||||||||||||||| |||| ||||||||||||||||| ||||||||| || |||| ||||||||||||| || ||||||    
T  33610991 atggctgattatacataagaattgtccgaattataaaattcgaaatagtaaacatgatttcggattatgaaattcggaaacct 33610909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 44937875 - 44937797
Alignment:
Q  5 ctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccgaaaacct 83  Q
    |||||||||||||| |||| |||| |||||||||| | ||||||||| || ||||||||||||||||||||||||||||    
T  44937875 ctgattatacataagaattgtccggattataaaatccgaaatagtaaacatgattccggattatgaaatccgaaaacct 44937797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 49786851 - 49786947
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccgaaaacct-aaagacatttttg 96  Q
    |||||||| ||||||| | |||| |||| |||||||||| | ||||||||| || ||||||||||||||||||||| |||||| || ||||||||||    
T  49786851 atggctgactatacattagaattgtccggattataaaatccgaaatagtaaacatgattccggattatgaaatccggaaacctcaaggacatttttg 49786947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 7011784 - 7011862
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccgaaa 79  Q
    |||||||||||||||||| |||| |||| |||||||||| | ||||||||| || || |||||||| | ||||||||||    
T  7011784 atggctgattatacataagaattgtccggattataaaatccgaaatagtaaacatgaatccggattttaaaatccgaaa 7011862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 34006836 - 34006884
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagt 49  Q
    |||||||||||||||||||||||||||| |||||||||| | |||||||    
T  34006836 atggctgattatacataaaaattatccggattataaaatccgaaatagt 34006884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 45046452 - 45046402
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaa 51  Q
    ||||||||||||||||||||||| |||| |||||||||||  |||||||||    
T  45046452 atggctgattatacataaaaattgtccggattataaaatttgaaatagtaa 45046402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 52744445 - 52744395
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaa 51  Q
    |||||||||||||||||| |||| |||| |||||||||||| |||||||||    
T  52744445 atggctgattatacataagaattgtccggattataaaattcgaaatagtaa 52744395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 45567491 - 45567394
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccgaaaacctaaagacatttttgaa 98  Q
    ||||||||||| |||||| |||| |||| |||||||||| ||||||||||| || || | |||||| | ||||||| |  |  |||||||||||||||    
T  45567491 atggctgattacacataagaattgtccggattataaaatccaaaatagtaaacatgaattcggattttaaaatccggatgcacaaagacatttttgaa 45567394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 17000886 - 17000957
Alignment:
Q  5 ctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccg 76  Q
    |||||||||||||| |||| |||| |||||||||| | ||||||||| || || |||||||| | |||||||    
T  17000886 ctgattatacataagaattgtccggattataaaatccgaaatagtaaacatgaatccggattttaaaatccg 17000957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 32817396 - 32817321
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccg 76  Q
    |||||||||||||||||| |||| |||| |||||||||| | ||||||||| || || ||| |||| | |||||||    
T  32817396 atggctgattatacataagaattgtccggattataaaatccgaaatagtaaacatgaatccagattttaaaatccg 32817321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 34162374 - 34162303
Alignment:
Q  5 ctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccg 76  Q
    |||||||||||||| |||| |||| |||||||||| | ||||||||| || || |||||||| | |||||||    
T  34162374 ctgattatacataataattgtccggattataaaatccgaaatagtaaacatgaatccggattttaaaatccg 34162303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 40907515 - 40907444
Alignment:
Q  5 ctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccg 76  Q
    ||||||||||||||||||| |||| ||||||||||   ||||||||| || || |||||||| | |||||||    
T  40907515 ctgattatacataaaaattgtccggattataaaatctgaaatagtaaacatgaatccggattttaaaatccg 40907444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 18583815 - 18583852
Alignment:
Q  116 gcgcgagaatcctatagggtgagaaaaataatactctt 153  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  18583815 gcgcgagaatcctatagggtgggaaaagtaatactctt 18583852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 667229 - 667277
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagt 49  Q
    |||||| ||||||||||| |||| ||||||||||||||| | |||||||    
T  667229 atggctaattatacataagaattgtccgaattataaaatccgaaatagt 667277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 116 - 152
Target Start/End: Original strand, 49786969 - 49787005
Alignment:
Q  116 gcgcgagaatcctatagggtgagaaaaataatactct 152  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  49786969 gcgcgagaatcctatagggtgggaaaagtaatactct 49787005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 6e-20; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 21004888 - 21004970
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccgaaaacct 83  Q
    |||| ||||||||||||| |||| |||| |||||||||||| ||||||||| || |||||||||||||||||| |||||||||    
T  21004888 atggttgattatacataagaattgtccggattataaaattcgaaatagtaaacaagattccggattatgaaattcgaaaacct 21004970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 31519476 - 31519394
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccgaaaacct 83  Q
    ||||||||||||  |||| |||| ||||||||||||||| | ||||||||| || ||||||||||||||||||||| ||||||    
T  31519476 atggctgattatttataagaattgtccgaattataaaatccgaaatagtaaacatgattccggattatgaaatccggaaacct 31519394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 14163638 - 14163563
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccg 76  Q
    |||||| ||||||||||| |||| ||||||||||||||||| ||||||||| || || |||||||| | |||||||    
T  14163638 atggctaattatacataagaattgtccgaattataaaattcgaaatagtaaacatgaatccggattttaaaatccg 14163563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 42280489 - 42280414
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccg 76  Q
    |||||||||||||||||| |||| |||| |||||||||| ||||||||||| || || |||||||| | |||||||    
T  42280489 atggctgattatacataagaattgtccggattataaaatccaaaatagtaaacaagaatccggattttaaaatccg 42280414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 8885040 - 8884966
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatcc 75  Q
    |||||||||||||||||| |||| |||| |||||||||| | ||||||||| || || |||||||| | ||||||    
T  8885040 atggctgattatacataagaattgtccggattataaaatccgaaatagtaaacatgaatccggattttaaaatcc 8884966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 9074100 - 9074174
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatcc 75  Q
    |||||||||||||||||| |||| |||| |||||||||| | ||||||||| || || |||||||| | ||||||    
T  9074100 atggctgattatacataagaattgtccggattataaaatccgaaatagtaaacatgaatccggattttaaaatcc 9074174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 3095260 - 3095325
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggatt 66  Q
    |||||||||||||||||| |||| |||| |||||||||| | ||||||||| || || ||||||||    
T  3095260 atggctgattatacataagaattgtccggattataaaatccgaaatagtaaacatgaatccggatt 3095325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 116 - 152
Target Start/End: Complemental strand, 41530555 - 41530519
Alignment:
Q  116 gcgcgagaatcctatagggtgagaaaaataatactct 152  Q
    ||||||||||||||||||||||||||| |||||||||    
T  41530555 gcgcgagaatcctatagggtgagaaaagtaatactct 41530519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 11698641 - 11698716
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccg 76  Q
    |||||||||||||||||| || |||||| |||||||||| | ||||||||| || || |||| ||| | |||||||    
T  11698641 atggctgattatacataagaactatccggattataaaatccgaaatagtaaacatgaatccgaattttaaaatccg 11698716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 11697907 - 11697833
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatcc 75  Q
    |||||||||||||||||| || | |||| |||||||||| | ||||||||| || || |||||||| | ||||||    
T  11697907 atggctgattatacataagaactgtccggattataaaatccgaaatagtaaacatgaatccggattttaaaatcc 11697833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 34853887 - 34853937
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaa 51  Q
    ||||||| |||||||||| |||| |||| |||||||||| |||||||||||    
T  34853887 atggctggttatacataagaattgtccggattataaaatccaaaatagtaa 34853937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 34854275 - 34854321
Alignment:
Q  5 ctgattatacataaaaattatccgaattataaaattcaaaatagtaa 51  Q
    |||||||||||||| |||| |||| |||||||||| |||||||||||    
T  34854275 ctgattatacataagaattgtccggattataaaatccaaaatagtaa 34854321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 40995229 - 40995279
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaa 51  Q
    ||||||||||| |||||| |||| ||||||||||||||| | |||||||||    
T  40995229 atggctgattacacataagaattgtccgaattataaaatccgaaatagtaa 40995279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 31520151 - 31520188
Alignment:
Q  116 gcgcgagaatcctatagggtgagaaaaataatactctt 153  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  31520151 gcgcgagaatcctatagggtgggaaaagtaatactctt 31520188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 6e-20; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 47203056 - 47203138
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccgaaaacct 83  Q
    |||||||||||||||||| |||| |||| |||||||||| | ||||||||| || ||||||||||||||||||||| ||||||    
T  47203056 atggctgattatacataagaattgtccggattataaaatccgaaatagtaaacatgattccggattatgaaatccggaaacct 47203138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 8155467 - 8155563
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccgaaaacct-aaagacatttttg 96  Q
    ||||||||||||||||||  ||| |||| |||||||||| ||||||||||| || ||||| ||||||||||||||| |||||| || ||||||||||    
T  8155467 atggctgattatacataagtattgtccggattataaaatccaaaatagtaaacatgattctggattatgaaatccggaaacctcaaggacatttttg 8155563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 18951455 - 18951379
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccga 77  Q
    |||||||||||||||||| |||| |||| |||||||||| | ||||||||| || ||||||||||||||||||||||    
T  18951455 atggctgattatacataagaattgtccggattataaaatccgaaatagtaaacatgattccggattatgaaatccga 18951379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 3304335 - 3304253
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccgaaaacct 83  Q
    |||||||||||||||||| ||||||||| |||||||||| | ||||| ||| || ||||| |||||||||||||| |||||||    
T  3304335 atggctgattatacataagaattatccggattataaaatccgaaataataaacatgattctggattatgaaatccaaaaacct 3304253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 31643616 - 31643698
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccgaaaacct 83  Q
    |||| ||||||||||||| |||| |||| |||||||||| | ||||||||| || ||||||||||||||||| ||| ||||||    
T  31643616 atggttgattatacataagaattgtccggattataaaatccgaaatagtaaacatgattccggattatgaaagccggaaacct 31643698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 42925227 - 42925149
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccgaaa 79  Q
    |||||||||||||||||| |||| |||| |||||||||| ||||||||||| || || |||||||| | ||||||||||    
T  42925227 atggctgattatacataagaattgtccggattataaaatccaaaatagtaaacatgaatccggattttaaaatccgaaa 42925149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 33573612 - 33573563
Alignment:
Q  30 attataaaattcaaaatagtaaccacgattccggattatgaaatccgaaa 79  Q
    |||||||||| ||||||||||| || ||||||||||||||||||||||||    
T  33573612 attataaaatccaaaatagtaaacatgattccggattatgaaatccgaaa 33573563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 24689925 - 24689877
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagt 49  Q
    |||||||||||||||||| |||| |||| |||||||||||| |||||||    
T  24689925 atggctgattatacataagaattgtccggattataaaattcgaaatagt 24689877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 3936554 - 3936629
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccg 76  Q
    |||||||||||||||||| |||| |||| ||||||||||  |||||||||| || || ||| |||| | |||||||    
T  3936554 atggctgattatacataagaattgtccggattataaaatctaaaatagtaaacatgaatccagattttaaaatccg 3936629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 9152354 - 9152429
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccg 76  Q
    |||||||||||||||||| |||| |||| |||||||||| | ||||||||| || || | |||||| | |||||||    
T  9152354 atggctgattatacataagaattgtccggattataaaatccgaaatagtaaacatgaattcggattttaaaatccg 9152429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 36468138 - 36468075
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccgga 64  Q
    |||| ||||||||||||| |||| |||| |||||||||| ||||||||||| || || ||||||    
T  36468138 atggttgattatacataagaattgtccggattataaaatccaaaatagtaaacatgaatccgga 36468075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 42864691 - 42864616
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccg 76  Q
    |||||||| ||||| ||| |||| |||| |||||||||| ||||||||||| || || |||||||| | |||||||    
T  42864691 atggctgaatatacttaagaattgtccggattataaaatccaaaatagtaaacatgaatccggattttaaaatccg 42864616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 24041779 - 24041718
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccg 62  Q
    |||||||||||||||||| |||| || | |||||||||| | ||||||||| || |||||||    
T  24041779 atggctgattatacataagaattgtcaggattataaaatccgaaatagtaaacatgattccg 24041718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 37517849 - 37517777
Alignment:
Q  4 gctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccg 76  Q
    ||||||||||||||| |||| |||  |||||||||| | ||||||||| || || |||||||| | |||||||    
T  37517849 gctgattatacataagaattgtccagattataaaatccgaaatagtaaacatgaatccggattttaaaatccg 37517777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 6e-20; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 32044791 - 32044873
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccgaaaacct 83  Q
    |||||||||||||||||| |||| |||| |||||||||| | ||||||||| || |||||| |||||||||||||||||||||    
T  32044791 atggctgattatacataagaattgtccggattataaaatccgaaatagtaaacatgattccagattatgaaatccgaaaacct 32044873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 4507893 - 4507818
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccg 76  Q
    |||||||||||||||||| |||| |||| |||||||||||| ||||||||| || || |||||||| | |||||||    
T  4507893 atggctgattatacataagaattgtccggattataaaattcgaaatagtaaacatgaatccggattttaaaatccg 4507818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 5639672 - 5639722
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaa 51  Q
    ||||||||||||||||||||||| ||||||||||||||| | |||||||||    
T  5639672 atggctgattatacataaaaattgtccgaattataaaatccgaaatagtaa 5639722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 3716882 - 3716836
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaata 47  Q
    |||||||||||||||||| |||| ||||||||||||||||| |||||    
T  3716882 atggctgattatacataagaattgtccgaattataaaattcgaaata 3716836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 13096735 - 13096800
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggatt 66  Q
    |||||||||||||||||| ||||||||| ||||||||||   ||||||||| || || ||||||||    
T  13096735 atggctgattatacataagaattatccggattataaaatctgaaatagtaaacatgaatccggatt 13096800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 7416354 - 7416418
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggat 65  Q
    ||||||||||||||||||||||| |||| ||||||||||   ||||||||| || || |||||||    
T  7416354 atggctgattatacataaaaattgtccggattataaaatctgaaatagtaaacatgaatccggat 7416418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 7423479 - 7423554
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccg 76  Q
    |||| ||||||||||||| |||| |||| |||||||||| | ||||||||| || || |||||||| | |||||||    
T  7423479 atggttgattatacataagaattgtccggattataaaatccgaaatagtaaacatgaatccggattttaaaatccg 7423554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 1945161 - 1945115
Alignment:
Q  5 ctgattatacataaaaattatccgaattataaaattcaaaatagtaa 51  Q
    |||||||||||||| |||| ||||||||||||||| | |||||||||    
T  1945161 ctgattatacataagaattttccgaattataaaatccgaaatagtaa 1945115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 9e-16; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 38030848 - 38030773
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccg 76  Q
    |||||||||||||||||| |||| |||| ||||||||||   ||||||||| ||| ||||||||||||||||||||    
T  38030848 atggctgattatacataagaattgtccggattataaaatctgaaatagtaaacaccattccggattatgaaatccg 38030773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 31928714 - 31928636
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccgaaa 79  Q
    |||||||||||||||||| |||| |||| |||||||||| | ||||||||| || || |||||||| | ||||||||||    
T  31928714 atggctgattatacataagaattgtccggattataaaatcctaaatagtaaacatgaatccggattttaaaatccgaaa 31928636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 26189905 - 26189833
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaat 73  Q
    ||||||||||| |||||| |||| |||||||||||||||   ||||||||| || |||| |||||||||||||    
T  26189905 atggctgattaaacataagaattgtccgaattataaaatctgaaatagtaaacatgatttcggattatgaaat 26189833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 4064380 - 4064309
Alignment:
Q  5 ctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccg 76  Q
    |||||||||||||| |||| |||| |||||||||| ||||||||||| || || |||||||| | |||||||    
T  4064380 ctgattatacataagaattgtccggattataaaatccaaaatagtaaacatgaatccggattttaaaatccg 4064309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 6157900 - 6157971
Alignment:
Q  5 ctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccg 76  Q
    |||||||||||||| |||| ||||||||||||||| | ||||||||| || || |||||||| | |||||||    
T  6157900 ctgattatacataagaattgtccgaattataaaatccgaaatagtaaacatgaatccggattttaaaatccg 6157971  T

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Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 33488143 - 33488218
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccg 76  Q
    |||||||||||||||||| |||| |||| |||||||||| | ||||||||| || || |||||||| | |||||||    
T  33488143 atggctgattatacataagaattgtccggattataaaatccgaaatagtaaacatgaatccggattttaaaatccg 33488218  T

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Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 12464690 - 12464620
Alignment:
Q  5 ctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatcc 75  Q
    |||||||||||||| |||| ||| ||| ||||||| | ||||||||| || ||||||||||||| ||||||    
T  12464690 ctgattatacataagaattctccaaataataaaatccgaaatagtaaacatgattccggattataaaatcc 12464620  T

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Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 20892145 - 20892223
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccgaaa 79  Q
    |||||||||||||| ||| |||| |||| |||||||||| | ||||||||| || || |||||||| | ||||||||||    
T  20892145 atggctgattatacctaagaattgtccggattataaaatccgaaatagtaaacatgaatccggattttaaaatccgaaa 20892223  T

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Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 29863092 - 29863157
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggatt 66  Q
    |||||||||||||||||| |||| |||| |||||| ||||| ||||||||| || || ||||||||    
T  29863092 atggctgattatacataagaattgtccggattatataattcgaaatagtaaacatgaatccggatt 29863157  T

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Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 37183376 - 37183311
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggatt 66  Q
    |||||||||||||||||| |||| |||| |||||||||| | ||||||||| || || ||||||||    
T  37183376 atggctgattatacataagaattgtccggattataaaatccgaaatagtaaacatgaatccggatt 37183311  T

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Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 31220924 - 31220852
Alignment:
Q  4 gctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccg 76  Q
    ||||||||||||||| |||| |||| |||||||||| | ||||||||| || || |||| ||| | |||||||    
T  31220924 gctgattatacataagaattgtccggattataaaatccgaaatagtaaacatgaatccgaattttaaaatccg 31220852  T

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Target: scaffold0018 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 173950 - 173872
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccgaaa 79  Q
    |||||||||||||||||| |||| |||| |||||||||| ||||||||||| || || |||||||| | ||||| ||||    
T  173950 atggctgattatacataagaattgtccggattataaaatccaaaatagtaaacatgaatccggattttaaaatctgaaa 173872  T

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Target: scaffold0137 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 9091 - 9016
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccg 76  Q
    |||||||||| ||||||| |||| |||| |||||||||| ||||||||||| || || |||||||| | |||||||    
T  9091 atggctgattttacataagaattgtccggattataaaatccaaaatagtaaacatgaatccggattttaaaatccg 9016  T

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Target: scaffold0027 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 141585 - 141507
Alignment:
Q  1 atggctgattatacataaaaattatccgaattataaaattcaaaatagtaaccacgattccggattatgaaatccgaaa 79  Q
    |||||| ||||||||||| |||| |||| |||||||||| | ||||||||| || || |||| ||| | ||||||||||    
T  141585 atggctaattatacataagaattgtccggattataaaatccgaaatagtaaacatgaatccgaattttaaaatccgaaa 141507  T

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