View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4510_low_24 (Length: 247)
Name: NF4510_low_24
Description: NF4510
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4510_low_24 |
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Alignment Details
Target: chr6 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 1491609 - 1491847
Alignment:
| Q |
1 |
tagcatacaattattttattttctcgaattattacacgagtgtttgtaccctttataaatacaatgtgattatgtgatacatcaactgtgtcatgaatca |
100 |
Q |
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| T |
1491609 |
tagcatacaattattttattttctcgaattattacacgagtgtttgtaccctttataaatacaatgtgattatgtgatacatcaactgtgtcatgaatca |
1491708 |
T |
|
| Q |
101 |
aaatccaaaaaactgttttagaaagc---catcatgccaacattgttaatgttctagactatgcatacataacctttttgtttggctaagttcattgact |
197 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1491709 |
aaatccaaaaaactgttttagaaagccaacatcatgccaacattgttaatgttctagactatgcatacataacctttttgtttggctaagttcattgact |
1491808 |
T |
|
| Q |
198 |
acatgttctccattttgtgtgtgaaatactgatgatgat |
236 |
Q |
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|||| ||||||||||||||||||||| |||||||||||| |
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| T |
1491809 |
acattttctccattttgtgtgtgaaacactgatgatgat |
1491847 |
T |
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