View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4512_high_26 (Length: 303)
Name: NF4512_high_26
Description: NF4512
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4512_high_26 |
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Alignment Details
Target: chr2 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 55981 - 55684
Alignment:
| Q |
1 |
taagttgaggttcttggacaaggcttgtgtccaagaggccgggaacaacacaaagggaagcccgtggagattgtgtagtgttgcacaagttgaacaagca |
100 |
Q |
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| T |
55981 |
taagttgaggttcttggacaaggcttgtgtccaagaggccgggaacaacacaaaggaaagcccgtggagattgtgtagtgttgcacaagttgaacaagca |
55882 |
T |
|
| Q |
101 |
aagatattactttcggttattccaatttttgcatgcactataattttcaacactatcttagcacaacttcaaacattctcggtccagcaaggaagtgcca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
55881 |
aagatattactttcggttattccaatttttgcatgcactataattttcaacactatcttagcacaacttcaaacattctcggtccagcaaggaagtgcca |
55782 |
T |
|
| Q |
201 |
tggacacacatgtcacaaaatcatttcatatccctccagcatcacttcagtcaattccttacatttttctcatcgttgtagtccctccctatgctact |
298 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |
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| T |
55781 |
tggacacacatgtcacaaaatcatttcatatccctccagcatcacttcagtcaattccttacatttttctcatcgttgtagtccctctctatgatact |
55684 |
T |
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