View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4512_low_10 (Length: 449)
Name: NF4512_low_10
Description: NF4512
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4512_low_10 |
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Alignment Details
Target: chr6 (Bit Score: 171; Significance: 1e-91; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 21144770 - 21144596
Alignment:
| Q |
1 |
tgtatcctcatcaaaatccaagaactcaccaaattggtctccaatctgcttgaaagcctcttcatcccagacatgaactggtaaacttaggattttaatc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21144770 |
tgtatcctcatcaaaatccaagaactcaccaaattggtctccaatctgcttgaaagcctcttcatcccagacatgaactggtaaacttaggattttaatc |
21144671 |
T |
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| Q |
101 |
caaacagttattttgctggccactaagcttggattccattccttcatctccctaaaatgagaatcccaccaaaat |
175 |
Q |
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||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21144670 |
caaacagttcttttgctggccactaagcttggattccattccttcatctccctaaaatgagaatcccaccaaaat |
21144596 |
T |
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