View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4512_low_2 (Length: 579)

Name: NF4512_low_2
Description: NF4512
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4512_low_2
NF4512_low_2
[»] chr1 (50 HSPs)
chr1 (286-568)||(9830492-9830775)
chr1 (19-140)||(9830902-9831023)
chr1 (404-468)||(51589819-51589883)
chr1 (404-511)||(17452686-17452789)
chr1 (404-477)||(4112547-4112620)
chr1 (258-319)||(10913933-10913994)
chr1 (404-514)||(17452835-17452941)
chr1 (258-319)||(33619059-33619120)
chr1 (404-514)||(35772235-35772341)
chr1 (258-319)||(37172411-37172472)
chr1 (404-514)||(42586446-42586551)
chr1 (258-319)||(43191819-43191880)
chr1 (258-319)||(50096292-50096353)
chr1 (404-460)||(25145492-25145548)
chr1 (404-513)||(40079124-40079229)
chr1 (417-510)||(52961557-52961646)
chr1 (394-514)||(2859389-2859505)
chr1 (404-520)||(4113013-4113124)
chr1 (407-515)||(31181523-31181627)
chr1 (258-319)||(33716-33777)
chr1 (258-319)||(14602169-14602230)
chr1 (258-319)||(20061961-20062022)
chr1 (258-319)||(26244708-26244769)
chr1 (404-457)||(27413371-27413424)
chr1 (394-459)||(27413604-27413669)
chr1 (258-319)||(50624925-50624986)
chr1 (407-468)||(51589005-51589066)
chr1 (404-514)||(38733353-38733459)
chr1 (404-468)||(51589239-51589303)
chr1 (418-461)||(5953497-5953540)
chr1 (488-519)||(17468310-17468341)
chr1 (485-519)||(21626423-21626457)
chr1 (407-514)||(25137313-25137416)
chr1 (261-319)||(28031809-28031867)
chr1 (415-468)||(3170014-3170067)
chr1 (407-468)||(5953206-5953267)
chr1 (223-256)||(9830786-9830819)
chr1 (258-319)||(39288317-39288378)
chr1 (404-457)||(40316057-40316110)
chr1 (258-319)||(42154909-42154970)
chr1 (258-319)||(47829121-47829182)
chr1 (408-456)||(2859638-2859686)
chr1 (404-460)||(3169787-3169843)
chr1 (404-468)||(9499259-9499322)
chr1 (263-319)||(29584557-29584613)
chr1 (404-460)||(31432237-31432293)
chr1 (404-444)||(31496378-31496418)
chr1 (404-460)||(33156754-33156810)
chr1 (404-460)||(35772050-35772106)
chr1 (404-460)||(52907405-52907461)
[»] chr7 (47 HSPs)
chr7 (404-519)||(11211686-11211796)
chr7 (258-319)||(19476553-19476614)
chr7 (408-459)||(42985134-42985185)
chr7 (408-458)||(26028972-26029022)
chr7 (404-514)||(36277233-36277339)
chr7 (258-319)||(42517026-42517087)
chr7 (404-514)||(48661562-48661668)
chr7 (408-460)||(23796034-23796086)
chr7 (260-319)||(34487303-34487362)
chr7 (407-514)||(1596799-1596902)
chr7 (395-477)||(22574840-22574921)
chr7 (261-319)||(23177209-23177267)
chr7 (258-319)||(24519-24580)
chr7 (408-514)||(3038095-3038197)
chr7 (404-514)||(17202150-17202256)
chr7 (258-319)||(19157852-19157913)
chr7 (258-319)||(20757251-20757312)
chr7 (407-514)||(21054963-21055066)
chr7 (404-477)||(25620140-25620213)
chr7 (404-514)||(29469576-29469682)
chr7 (258-319)||(31579594-31579655)
chr7 (258-319)||(40729222-40729283)
chr7 (407-468)||(40746278-40746339)
chr7 (404-477)||(48243068-48243141)
chr7 (259-319)||(22364816-22364875)
chr7 (407-455)||(24432148-24432196)
chr7 (404-460)||(34027414-34027470)
chr7 (404-459)||(6782883-6782938)
chr7 (404-459)||(36206070-36206125)
chr7 (404-458)||(4506955-4507009)
chr7 (407-514)||(21861265-21861368)
chr7 (407-477)||(21861533-21861603)
chr7 (407-514)||(47710414-47710517)
chr7 (407-514)||(47722070-47722173)
chr7 (407-460)||(21822064-21822117)
chr7 (258-319)||(22954503-22954564)
chr7 (404-514)||(29469811-29469917)
chr7 (404-514)||(33996318-33996424)
chr7 (258-319)||(34595482-34595543)
chr7 (407-456)||(40991754-40991803)
chr7 (408-477)||(48243448-48243517)
chr7 (404-460)||(2544454-2544510)
chr7 (404-460)||(4886350-4886406)
chr7 (404-468)||(10903098-10903162)
chr7 (416-456)||(21311415-21311455)
chr7 (404-460)||(31257038-31257094)
chr7 (417-477)||(31485679-31485739)
[»] chr6 (39 HSPs)
chr6 (395-514)||(9705225-9705340)
chr6 (404-514)||(12329951-12330057)
chr6 (404-460)||(21690743-21690799)
chr6 (395-514)||(6054374-6054489)
chr6 (258-319)||(3484943-3485004)
chr6 (404-514)||(4868584-4868690)
chr6 (258-319)||(5404729-5404790)
chr6 (404-514)||(6542950-6543056)
chr6 (404-514)||(12330298-12330403)
chr6 (404-514)||(25065101-25065207)
chr6 (261-319)||(28853647-28853705)
chr6 (407-514)||(33494510-33494613)
chr6 (404-477)||(4868820-4868893)
chr6 (258-319)||(8926346-8926407)
chr6 (404-477)||(12330186-12330259)
chr6 (262-319)||(17238197-17238254)
chr6 (258-319)||(19661512-19661573)
chr6 (258-319)||(29819545-29819606)
chr6 (404-519)||(30256779-30256889)
chr6 (258-319)||(30609029-30609090)
chr6 (263-319)||(4601117-4601173)
chr6 (405-514)||(6237715-6237815)
chr6 (404-460)||(8026410-8026466)
chr6 (404-460)||(8026625-8026681)
chr6 (247-319)||(16525341-16525413)
chr6 (415-477)||(4906810-4906872)
chr6 (407-514)||(13353172-13353275)
chr6 (261-319)||(31717337-31717395)
chr6 (407-514)||(33796297-33796400)
chr6 (258-319)||(5923986-5924047)
chr6 (404-460)||(7915872-7915926)
chr6 (258-319)||(8936603-8936664)
chr6 (411-460)||(20830771-20830820)
chr6 (258-315)||(33783564-33783621)
chr6 (417-477)||(5648692-5648752)
chr6 (404-460)||(11721926-11721982)
chr6 (417-514)||(17147680-17147773)
chr6 (404-468)||(20373584-20373647)
chr6 (404-460)||(30256599-30256655)
[»] chr3 (41 HSPs)
chr3 (404-514)||(54368487-54368593)
chr3 (404-519)||(45138978-45139089)
chr3 (258-319)||(16056507-16056568)
chr3 (247-319)||(46962745-46962817)
chr3 (404-514)||(20327621-20327727)
chr3 (258-319)||(26582775-26582836)
chr3 (258-319)||(27934610-27934671)
chr3 (258-319)||(32315539-32315600)
chr3 (404-514)||(35038201-35038307)
chr3 (258-319)||(52835704-52835765)
chr3 (395-519)||(45138800-45138920)
chr3 (261-319)||(33162483-33162541)
chr3 (407-514)||(38791460-38791563)
chr3 (258-319)||(14545999-14546060)
chr3 (404-514)||(16926956-16927062)
chr3 (404-514)||(20303071-20303177)
chr3 (407-513)||(22729072-22729174)
chr3 (258-319)||(29838457-29838518)
chr3 (258-319)||(49500002-49500063)
chr3 (258-319)||(50645631-50645692)
chr3 (404-460)||(1723083-1723139)
chr3 (404-460)||(11589806-11589862)
chr3 (404-460)||(31317249-31317305)
chr3 (405-514)||(35038436-35038541)
chr3 (258-318)||(49121875-49121935)
chr3 (404-459)||(24866219-24866274)
chr3 (417-460)||(45828040-45828083)
chr3 (260-319)||(55092368-55092427)
chr3 (394-460)||(34610582-34610648)
chr3 (407-456)||(13741111-13741160)
chr3 (404-514)||(16239562-16239668)
chr3 (408-514)||(20327860-20327962)
chr3 (258-319)||(38807697-38807758)
chr3 (262-319)||(42093558-42093615)
chr3 (404-477)||(54567896-54567969)
chr3 (404-460)||(4155345-4155401)
chr3 (404-456)||(6487340-6487392)
chr3 (247-319)||(7029533-7029605)
chr3 (404-464)||(33205482-33205542)
chr3 (404-460)||(50052546-50052602)
chr3 (415-520)||(50930667-50930768)
[»] chr5 (47 HSPs)
chr5 (247-319)||(7133273-7133345)
chr5 (407-514)||(24346511-24346614)
chr5 (404-520)||(1564574-1564686)
chr5 (394-514)||(41666754-41666870)
chr5 (408-519)||(15438843-15438950)
chr5 (407-514)||(24269881-24269983)
chr5 (404-519)||(28510057-28510168)
chr5 (258-319)||(6497351-6497412)
chr5 (258-319)||(10461508-10461569)
chr5 (258-319)||(22394287-22394348)
chr5 (404-514)||(24346744-24346850)
chr5 (404-514)||(41667000-41667106)
chr5 (404-468)||(27133000-27133064)
chr5 (404-447)||(9187320-9187363)
chr5 (407-514)||(17352445-17352547)
chr5 (258-319)||(14868832-14868893)
chr5 (258-319)||(18786144-18786205)
chr5 (258-319)||(24491006-24491067)
chr5 (404-477)||(24531603-24531676)
chr5 (258-319)||(41137300-41137361)
chr5 (407-519)||(7369690-7369798)
chr5 (408-468)||(17015890-17015950)
chr5 (404-460)||(19522341-19522397)
chr5 (404-460)||(25258101-25258157)
chr5 (404-460)||(25258308-25258364)
chr5 (404-460)||(25321891-25321947)
chr5 (404-460)||(25322098-25322154)
chr5 (417-468)||(38731623-38731674)
chr5 (415-477)||(6413444-6413506)
chr5 (408-514)||(8081124-8081227)
chr5 (407-514)||(9368801-9368904)
chr5 (407-514)||(18333475-18333578)
chr5 (407-457)||(38731848-38731898)
chr5 (258-319)||(3598572-3598633)
chr5 (258-319)||(4122740-4122801)
chr5 (258-319)||(5933288-5933349)
chr5 (258-319)||(6542422-6542483)
chr5 (404-457)||(20225065-20225118)
chr5 (404-477)||(21306891-21306964)
chr5 (404-477)||(21314729-21314802)
chr5 (408-477)||(24528544-24528613)
chr5 (258-315)||(29991261-29991318)
chr5 (404-461)||(43117902-43117959)
chr5 (404-460)||(8098338-8098394)
chr5 (404-460)||(19522108-19522164)
chr5 (404-456)||(24487652-24487704)
chr5 (404-460)||(33337462-33337518)
[»] scaffold0766 (1 HSPs)
scaffold0766 (394-514)||(6245-6361)
[»] chr8 (51 HSPs)
chr8 (417-520)||(38447447-38447546)
chr8 (404-517)||(22638186-22638295)
chr8 (258-319)||(3272879-3272940)
chr8 (258-319)||(13154398-13154459)
chr8 (404-514)||(15042677-15042783)
chr8 (404-514)||(17469789-17469895)
chr8 (404-514)||(17477036-17477142)
chr8 (258-319)||(24332421-24332482)
chr8 (408-514)||(24532432-24532534)
chr8 (258-319)||(26479457-26479518)
chr8 (258-319)||(31403076-31403137)
chr8 (404-514)||(39052936-39053042)
chr8 (404-514)||(39743500-39743606)
chr8 (404-460)||(20702818-20702874)
chr8 (394-514)||(39960162-39960279)
chr8 (394-514)||(10449971-10450087)
chr8 (408-519)||(8716080-8716187)
chr8 (404-458)||(34843140-34843194)
chr8 (400-457)||(4828092-4828149)
chr8 (407-513)||(5590378-5590480)
chr8 (407-460)||(18939307-18939360)
chr8 (404-514)||(19256593-19256699)
chr8 (258-319)||(27993440-27993501)
chr8 (258-319)||(28050742-28050803)
chr8 (404-514)||(28069364-28069470)
chr8 (404-457)||(29005888-29005941)
chr8 (261-318)||(31186535-31186592)
chr8 (258-319)||(31685829-31685890)
chr8 (404-461)||(42846612-42846669)
chr8 (404-460)||(24075313-24075369)
chr8 (487-519)||(30201610-30201642)
chr8 (407-519)||(4828259-4828367)
chr8 (404-517)||(37001194-37001303)
chr8 (407-514)||(11232204-11232307)
chr8 (407-460)||(3157569-3157622)
chr8 (258-319)||(6891937-6891998)
chr8 (258-319)||(6943816-6943877)
chr8 (487-520)||(8466810-8466843)
chr8 (404-477)||(12688076-12688149)
chr8 (404-514)||(19256827-19256933)
chr8 (404-477)||(20301265-20301338)
chr8 (404-477)||(21087897-21087970)
chr8 (395-460)||(27205181-27205246)
chr8 (490-519)||(29907815-29907844)
chr8 (404-477)||(35682788-35682861)
chr8 (258-318)||(9180204-9180264)
chr8 (404-456)||(10614946-10614998)
chr8 (404-460)||(10884086-10884141)
chr8 (404-452)||(15686047-15686095)
chr8 (404-460)||(27204985-27205041)
chr8 (404-460)||(27205083-27205139)
[»] chr4 (52 HSPs)
chr4 (416-519)||(44118878-44118977)
chr4 (404-514)||(35788630-35788736)
chr4 (395-514)||(35788865-35788980)
chr4 (258-319)||(989238-989299)
chr4 (258-319)||(11021832-11021893)
chr4 (258-319)||(17107591-17107652)
chr4 (258-319)||(22487379-22487440)
chr4 (404-514)||(22827509-22827615)
chr4 (258-319)||(46481076-46481137)
chr4 (404-460)||(9685653-9685709)
chr4 (404-460)||(12005476-12005532)
chr4 (258-318)||(13683163-13683223)
chr4 (394-514)||(22845444-22845560)
chr4 (258-317)||(46081539-46081598)
chr4 (407-514)||(39902573-39902676)
chr4 (415-519)||(53698993-53699093)
chr4 (258-319)||(5721111-5721172)
chr4 (404-514)||(6218410-6218516)
chr4 (258-319)||(13493047-13493108)
chr4 (258-319)||(16491806-16491867)
chr4 (258-319)||(16959927-16959988)
chr4 (258-319)||(17865135-17865196)
chr4 (404-514)||(21498766-21498872)
chr4 (404-514)||(28245533-28245639)
chr4 (258-319)||(37815500-37815561)
chr4 (258-319)||(39385324-39385385)
chr4 (258-319)||(43750106-43750167)
chr4 (404-514)||(50543574-50543680)
chr4 (404-460)||(1518185-1518241)
chr4 (404-460)||(22231315-22231371)
chr4 (421-519)||(27464272-27464366)
chr4 (404-460)||(53559297-53559353)
chr4 (260-319)||(12792735-12792794)
chr4 (260-319)||(20045963-20046022)
chr4 (418-477)||(35796763-35796822)
chr4 (407-477)||(400575-400645)
chr4 (406-460)||(5398221-5398275)
chr4 (395-477)||(22863478-22863560)
chr4 (261-315)||(26314642-26314696)
chr4 (481-519)||(28208414-28208452)
chr4 (261-319)||(32592906-32592964)
chr4 (404-457)||(9685422-9685475)
chr4 (404-514)||(21498325-21498431)
chr4 (432-514)||(27634116-27634194)
chr4 (407-460)||(53828533-53828586)
chr4 (404-460)||(5846167-5846223)
chr4 (417-477)||(11036766-11036826)
chr4 (404-460)||(14783194-14783250)
chr4 (408-452)||(30529937-30529981)
chr4 (404-460)||(35819135-35819191)
chr4 (417-514)||(37836051-37836144)
chr4 (404-460)||(50543337-50543393)
[»] chr2 (40 HSPs)
chr2 (258-319)||(17457881-17457942)
chr2 (258-319)||(18369176-18369237)
chr2 (394-514)||(16419473-16419589)
chr2 (394-514)||(40379206-40379322)
chr2 (258-319)||(3371461-3371522)
chr2 (258-319)||(12806708-12806769)
chr2 (404-514)||(40379451-40379557)
chr2 (258-319)||(41594114-41594175)
chr2 (258-319)||(42705111-42705172)
chr2 (404-460)||(2324495-2324551)
chr2 (247-319)||(7877487-7877559)
chr2 (404-468)||(17854936-17855000)
chr2 (407-455)||(27897513-27897561)
chr2 (259-319)||(37609119-37609179)
chr2 (261-319)||(13572633-13572691)
chr2 (261-319)||(30432758-30432816)
chr2 (258-319)||(4171684-4171745)
chr2 (404-514)||(5711446-5711552)
chr2 (258-319)||(14379276-14379337)
chr2 (258-319)||(19204751-19204812)
chr2 (258-319)||(29683333-29683394)
chr2 (432-514)||(33606089-33606167)
chr2 (258-315)||(33940844-33940901)
chr2 (404-460)||(2324261-2324317)
chr2 (247-319)||(2395305-2395377)
chr2 (262-318)||(6880137-6880193)
chr2 (404-460)||(15124555-15124611)
chr2 (404-468)||(29718341-29718405)
chr2 (488-519)||(10523219-10523250)
chr2 (404-516)||(14927071-14927179)
chr2 (261-319)||(6164061-6164119)
chr2 (415-477)||(16533551-16533613)
chr2 (419-514)||(17719371-17719462)
chr2 (261-319)||(28921355-28921413)
chr2 (404-457)||(19191617-19191670)
chr2 (404-514)||(28407800-28407906)
chr2 (404-514)||(32884078-32884184)
chr2 (432-514)||(37812533-37812611)
chr2 (404-460)||(37769950-37770006)
chr2 (417-457)||(40149023-40149063)
[»] scaffold0167 (1 HSPs)
scaffold0167 (258-319)||(4550-4611)
[»] scaffold0103 (1 HSPs)
scaffold0103 (258-319)||(43440-43501)
[»] scaffold0006 (1 HSPs)
scaffold0006 (259-319)||(212575-212635)
[»] scaffold0692 (1 HSPs)
scaffold0692 (404-514)||(5761-5867)
[»] scaffold0137 (1 HSPs)
scaffold0137 (258-319)||(36928-36989)
[»] scaffold0334 (1 HSPs)
scaffold0334 (408-460)||(4440-4492)
[»] scaffold0519 (1 HSPs)
scaffold0519 (407-514)||(2122-2225)
[»] scaffold0126 (1 HSPs)
scaffold0126 (261-319)||(36157-36215)
[»] scaffold0170 (1 HSPs)
scaffold0170 (258-319)||(8705-8766)
[»] scaffold0092 (1 HSPs)
scaffold0092 (404-477)||(5659-5732)
[»] scaffold0047 (1 HSPs)
scaffold0047 (407-460)||(12668-12721)
[»] scaffold0021 (1 HSPs)
scaffold0021 (258-319)||(118187-118247)
[»] scaffold0005 (1 HSPs)
scaffold0005 (404-460)||(56480-56536)


Alignment Details
Target: chr1 (Bit Score: 240; Significance: 1e-132; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 286 - 568
Target Start/End: Complemental strand, 9830775 - 9830492
Alignment:
Q  286 ttgagggagtgaaatcaagtattctacatattacttatttaattggaccaaattacaattcgaatagattttgcgtagacgaaaacaaaaagtggtatat 385  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||    
T  9830775 ttgagggagtgaaatcaagtattctacatattacttatttaattggaccaaattgcaattcgaatagattttggatagaccaaaacaaaaagtggtatat 9830676  T
Q  386 ctgtcacgactctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt-ttatgtt 484  Q
     ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9830675 ttgtcacgactctgagagatcgtgattgaatctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattgttatgtt 9830576  T
Q  485 aggccatctcttatccgatgtgggactctttaacagcagcaaaagacatttttaaaccttactagtaatacagacatttttcat 568  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  9830575 aggccatctcttatccgatgtgggactctttaacagcaacaaaagacatttttaaaccttactagtaatacagacatttgtcat 9830492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 9831023 - 9830902
Alignment:
Q  19 ttacactgttaaatacaataaagattaaagatcatgtccagaactgtatataagtttggcttagttgttgtgatggattagtaggtttaaatatgtcttt 118  Q
    ||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||| |||| || ||||||||||||||||    
T  9831023 ttacattgttaaatacaataaagattaaagatcatgtccagaattttatataagtttggcttagttgctgtgatgaattactaagtttaaatatgtcttt 9830924  T
Q  119 ttaagtcaatacaaatatgcca 140  Q
    ||||||| ||||||||||||||    
T  9830923 ttaagtcgatacaaatatgcca 9830902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 404 - 468
Target Start/End: Complemental strand, 51589883 - 51589819
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 468  Q
    |||||||||| | ||||||||||| || |||||||||||||||| ||||||||||||| ||||||    
T  51589883 atcgtggttgggcctaacacaaccccacaaaatcggcttgtgaggtgaggattgccctcacttat 51589819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 404 - 511
Target Start/End: Original strand, 17452686 - 17452789
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||||||| ||||||| |||    
T  17452686 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaatacat----tgtcaggccatgtcttatctgat 17452781  T
Q  504 gtgggact 511  Q
    ||||||||    
T  17452782 gtgggact 17452789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 477
Target Start/End: Original strand, 4112547 - 4112620
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 477  Q
    |||||||||| | ||||||||| | ||||||||||||||||||| ||| |||||||| ||||||| || |||||    
T  4112547 atcgtggttgtgcctaacacaatcccataaaatcggcttgtgaggtgatgattgcccctacttataaacacatt 4112620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 10913933 - 10913994
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  10913933 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 10913994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 514
Target Start/End: Original strand, 17452835 - 17452941
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||  | ||||||||||| || |||| ||||||||||| ||| ||||||||  |||||| || ||||    ||| ||||||| |||||||||||    
T  17452835 atcgtggttaggcctaacacaaccccacaaaaccggcttgtgaggtgaagattgcccccacttataaatacat----tgtcaggccatgtcttatccgat 17452930  T
Q  504 gtgggactctt 514  Q
    |||||||||||    
T  17452931 gtgggactctt 17452941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 33619120 - 33619059
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  33619120 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 33619059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 514
Target Start/End: Complemental strand, 35772341 - 35772235
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||| | ||||||||||| || |||| |||||| |||| | ||||||||||  |||||| || |||||    || |||||||||| ||||||||    
T  35772341 atcgtggttgggcctaacacaaccccacaaaaccggcttctgaggtaaggattgcccccacttataaacacatt----gtcaggccatctcctatccgat 35772246  T
Q  504 gtgggactctt 514  Q
    |||||||||||    
T  35772245 gtgggactctt 35772235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 37172472 - 37172411
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  37172472 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 37172411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 514
Target Start/End: Original strand, 42586446 - 42586551
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||| | ||||||||||| || ||||| |||||||||| ||||||||||||  ||||||  | ||||    ||| |||||||||||||||||||    
T  42586446 atcgtggttgggcctaacacaaccccacaaaattggcttgtgaggtgaggattgccc-cacttatatacacat----tgtcaggccatctcttatccgat 42586540  T
Q  504 gtgggactctt 514  Q
    ||| |||||||    
T  42586541 gtgagactctt 42586551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 43191880 - 43191819
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  43191880 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 43191819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 50096292 - 50096353
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  50096292 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 50096353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 460
Target Start/End: Original strand, 25145492 - 25145548
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||| |||||||||||||||| |||| || |||||||| ||||||||||||    
T  25145492 atcgtggttgggtctaacacaacctcacaaaaccgacttgtgaggtgaggattgccc 25145548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 513
Target Start/End: Complemental strand, 40079229 - 40079124
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||| |||||| ||||||||    
T  40079229 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggtcatctcctatccgat 40079134  T
Q  504 gtgggactct 513  Q
    || |||||||    
T  40079133 gtaggactct 40079124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 417 - 510
Target Start/End: Complemental strand, 52961646 - 52961557
Alignment:
Q  417 ctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggac 510  Q
    ||||||||||| ||||||| |||||| |||| ||||||||||||| |||||| || ||||    ||| || ||||||| |||||||||||||||    
T  52961646 ctaacacaaccccataaaaccggcttttgaggtgaggattgccctcacttataaacacat----tgtcagaccatctcctatccgatgtgggac 52961557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 394 - 514
Target Start/End: Original strand, 2859389 - 2859505
Alignment:
Q  394 actctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatct 493  Q
    ||||| ||| || ||||||| | |||||||||||||| | || ||||||||||| | ||||||||||  |||||| || ||||    ||| ||||||||     
T  2859389 actcttagaaatggtggttgggcctaacacaacctcacagaaccggcttgtgaggtaaggattgcccccacttataaacacat----tgtcaggccatca 2859484  T
Q  494 cttatccgatgtgggactctt 514  Q
    | |||||||||||||||||||    
T  2859485 cctatccgatgtgggactctt 2859505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 404 - 520
Target Start/End: Original strand, 4113013 - 4113124
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||||||| ||  |||||||    
T  4113013 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcccatccgat 4113108  T
Q  504 gtgggactctttaacag 520  Q
    |||||||| ||||||||    
T  4113109 gtgggact-tttaacag 4113124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 407 - 515
Target Start/End: Original strand, 31181523 - 31181627
Alignment:
Q  407 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 506  Q
    ||||||| | ||||||||||| ||||||| | ||||||||| ||||||||||||  |||||| || |||| |    | |||||||||||||||| |||||    
T  31181523 gtggttgggcctaacacaaccccataaaaccagcttgtgaggtgaggattgcccccacttataaacacatgt----tcaggccatctcttatccaatgtg 31181618  T
Q  507 ggactcttt 515  Q
    | |||||||    
T  31181619 gaactcttt 31181627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 33716 - 33777
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| ||  |||||||||| | ||||||| |||||||||||||||    
T  33716 ccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattac 33777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 14602169 - 14602230
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| ||||||| |||||||    
T  14602169 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctaaatattac 14602230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 20062022 - 20061961
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| |||||||||||  | ||||||||||| | ||||||| |||||||||||||||    
T  20062022 ccctataatattcattttagtcatcattttgagggactaaaatcaaatattctacatattac 20061961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 26244708 - 26244769
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||||| | |||| || |||||||||||||||    
T  26244708 ccctataatattcattttagtcctcattttgagggactaaaattaaatattctacatattac 26244769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 457
Target Start/End: Complemental strand, 27413424 - 27413371
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattg 457  Q
    ||||||||||   |||||||||||||| |||||||||||||||| |||||||||    
T  27413424 atcgtggttggacctaacacaacctcacaaaatcggcttgtgaggtgaggattg 27413371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 394 - 459
Target Start/End: Complemental strand, 27413669 - 27413604
Alignment:
Q  394 actctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcc 459  Q
    ||||| ||| ||| |||||||| ||||||||||||||||||| ||  ||||||| |||||||||||    
T  27413669 actcttagaaatcatggttgagcctaacacaacctcataaaaccgatttgtgaggtgaggattgcc 27413604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 50624925 - 50624986
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    |||| |||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  50624925 ccctgtaatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 50624986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 407 - 468
Target Start/End: Complemental strand, 51589066 - 51589005
Alignment:
Q  407 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 468  Q
    ||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||| ||||||    
T  51589066 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccctcacttat 51589005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 514
Target Start/End: Complemental strand, 38733459 - 38733353
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    ||||| |||| | |||||||||||||| |||| |||| | |||| ||||||||||||| ||||||  |||||| |  ||| || ||||| | ||||||||    
T  38733459 atcgttgttgggcctaacacaacctcacaaaaccggcctatgaggtgaggattgccctcacttat--aaacatat--tgtcagaccatcacatatccgat 38733364  T
Q  504 gtgggactctt 514  Q
    |||||||||||    
T  38733363 gtgggactctt 38733353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 468
Target Start/End: Complemental strand, 51589303 - 51589239
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 468  Q
    |||||||||  | ||||||||||| || |||| ||||||||||| ||||||||||||| ||||||    
T  51589303 atcgtggttaggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccctcacttat 51589239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 461
Target Start/End: Original strand, 5953497 - 5953540
Alignment:
Q  418 taacacaacctcataaaatcggcttgtgagctgaggattgccct 461  Q
    ||||||||||||| |||||||||| ||||| |||||||||||||    
T  5953497 taacacaacctcacaaaatcggctcgtgaggtgaggattgccct 5953540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 488 - 519
Target Start/End: Complemental strand, 17468341 - 17468310
Alignment:
Q  488 ccatctcttatccgatgtgggactctttaaca 519  Q
    ||||||||||||||||||||||||||||||||    
T  17468341 ccatctcttatccgatgtgggactctttaaca 17468310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 485 - 519
Target Start/End: Original strand, 21626423 - 21626457
Alignment:
Q  485 aggccatctcttatccgatgtgggactctttaaca 519  Q
    ||||||||||||||| |||||||||||||||||||    
T  21626423 aggccatctcttatctgatgtgggactctttaaca 21626457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 407 - 514
Target Start/End: Original strand, 25137313 - 25137416
Alignment:
Q  407 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 506  Q
    ||||||| | ||||||||||| || |||| |||||| |||| |||||||||||| ||||||| || | ||    ||| |||||| ||| || ||||||||    
T  25137313 gtggttgggcctaacacaaccccacaaaaccggcttatgaggtgaggattgcccatacttataaacaaat----tgtcaggccaactcctaaccgatgtg 25137408  T
Q  507 ggactctt 514  Q
    ||||||||    
T  25137409 ggactctt 25137416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 319
Target Start/End: Original strand, 28031809 - 28031867
Alignment:
Q  261 tataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    |||||| ||||||||||| || ||||||| ||| | ||||||| |||||||||||||||    
T  28031809 tataatattcattttagtcctcattttgaaggactaaaatcaaatattctacatattac 28031867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 468
Target Start/End: Complemental strand, 3170067 - 3170014
Alignment:
Q  415 gtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 468  Q
    ||||||||||||| || |||| ||||||||||| | ||||||||||| ||||||    
T  3170067 gtctaacacaaccccacaaaaccggcttgtgaggtaaggattgccctcacttat 3170014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 468
Target Start/End: Original strand, 5953206 - 5953267
Alignment:
Q  407 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 468  Q
    ||||||||| |||||||||||| | ||||||| ||||||||  |||||||| ||| ||||||    
T  5953206 gtggttgagcctaacacaaccttacaaaatcgacttgtgaggagaggattgtcctcacttat 5953267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 256
Target Start/End: Complemental strand, 9830819 - 9830786
Alignment:
Q  223 aagtccctgctaaatttgttaattttgaaattta 256  Q
    |||||||||||||||||||||||||||| |||||    
T  9830819 aagtccctgctaaatttgttaattttgatattta 9830786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 39288378 - 39288317
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| ||  |||||||||| | ||||||| |||||||| ||||||    
T  39288378 ccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacctattac 39288317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 457
Target Start/End: Original strand, 40316057 - 40316110
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattg 457  Q
    ||||||||||  ||||||||||||||| |||| |||||| |||| |||||||||    
T  40316057 atcgtggttggatctaacacaacctcacaaaaccggcttatgaggtgaggattg 40316110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 42154909 - 42154970
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| ||  |||||||||| | ||||||| ||||||| |||||||    
T  42154909 ccctataatattcattttagtcctcgttttgagggattaaaatcaaatattctaaatattac 42154970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 47829121 - 47829182
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||  | | ||||||| |||||||||||||||    
T  47829121 ccctataatattcattttagtcctcattttgagaaactaaaatcaaatattctacatattac 47829182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 408 - 456
Target Start/End: Original strand, 2859638 - 2859686
Alignment:
Q  408 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggatt 456  Q
    |||||| | |||||||||||||| |||| ||||||||||| ||||||||    
T  2859638 tggttggggctaacacaacctcacaaaaccggcttgtgaggtgaggatt 2859686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 3169843 - 3169787
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||| ||||||||    
T  3169843 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaagattgccc 3169787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 468
Target Start/End: Complemental strand, 9499322 - 9499259
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 468  Q
    |||||||||||||| ||||||||| || |||| ||| ||||||| ||| |||||||| |||||||    
T  9499322 atcgtggttgagtcgaacacaaccccacaaaaccgg-ttgtgaggtgaagattgcccctacttat 9499259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 263 - 319
Target Start/End: Original strand, 29584557 - 29584613
Alignment:
Q  263 taatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    |||| ||||||||||| ||||||||||||||   ||||| | |||||||||||||||    
T  29584557 taatattcattttagtccttattttgagggacacaaatcgaatattctacatattac 29584613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 460
Target Start/End: Original strand, 31432237 - 31432293
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||| | ||| ||||||| || |||| ||||||||||| ||||||||||||    
T  31432237 atcgtggttgggcctagcacaaccccacaaaaccggcttgtgaggtgaggattgccc 31432293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 444
Target Start/End: Original strand, 31496378 - 31496418
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgt 444  Q
    |||||| ||||||||||||||||| ||||||| ||||||||    
T  31496378 atcgtgattgagtctaacacaaccccataaaaccggcttgt 31496418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 33156810 - 33156754
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||| | ||||||||||| || |||| ||| ||||||| ||||||||||||    
T  33156810 atcgtggttgggcctaacacaaccccacaaaaccggtttgtgagatgaggattgccc 33156754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 35772106 - 35772050
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||| | ||||||||||| || |||| ||||||| ||| ||||||||||||    
T  35772106 atcgtggttgggcctaacacaaccccacaaaaccggcttgcgaggtgaggattgccc 35772050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 52907461 - 52907405
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||| |||| |||||||| || |||| | ||||||||| ||||||||||||    
T  52907461 atcgtggttgggtcttacacaaccccacaaaaccagcttgtgaggtgaggattgccc 52907405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 1e-17; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 404 - 519
Target Start/End: Original strand, 11211686 - 11211796
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||| | | ||||||||| || |||| ||||||||||| ||||||||||||  |||||| || |||||    |||||||||||||||||||||     
T  11211686 atcgtggttgggcccaacacaaccccacaaaaccggcttgtgaggtgaggattgcccc-acttataaagacatt----gttaggccatctcttatccgac 11211780  T
Q  504 gtgggactctttaaca 519  Q
    ||||||||||||||||    
T  11211781 gtgggactctttaaca 11211796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 19476553 - 19476614
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| |||||||||||||| ||||||||||| | ||||||| |||||||||||||||    
T  19476553 ccctataatattcattttagtactcattttgagggactaaaatcaaatattctacatattac 19476614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 408 - 459
Target Start/End: Original strand, 42985134 - 42985185
Alignment:
Q  408 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcc 459  Q
    ||||||||||||||||||||||| ||||||| |||||||| |||||||||||    
T  42985134 tggttgagtctaacacaacctcacaaaatcgacttgtgaggtgaggattgcc 42985185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 408 - 458
Target Start/End: Original strand, 26028972 - 26029022
Alignment:
Q  408 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgc 458  Q
    |||||| |||||||||||||||| |||||||||||||||| ||||||||||    
T  26028972 tggttgggtctaacacaacctcacaaaatcggcttgtgaggtgaggattgc 26029022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 514
Target Start/End: Original strand, 36277233 - 36277339
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||| | ||||||||||| || ||||||| |||||||| ||||||||||||  |||||| || ||||    ||| ||||||| |||| ||||||    
T  36277233 atcgtggttgggactaacacaaccccacaaaatcgacttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcttgtccgat 36277328  T
Q  504 gtgggactctt 514  Q
    ||| |||||||    
T  36277329 gtgagactctt 36277339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 42517026 - 42517087
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  42517026 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 42517087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 514
Target Start/End: Original strand, 48661562 - 48661668
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||| ||||||||||| |||| |||| ||||||||||| ||||||||||||  || ||| || ||||    ||| ||| |||||| |||| |||    
T  48661562 atcgtggttgggtctaacacaatctcacaaaaccggcttgtgaggtgaggattgcccccacctataaatacat----tgtcaggtcatctcctatctgat 48661657  T
Q  504 gtgggactctt 514  Q
    |||||||||||    
T  48661658 gtgggactctt 48661668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 408 - 460
Target Start/End: Original strand, 23796034 - 23796086
Alignment:
Q  408 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||| |||||||| || ||||||||||||||||||| ||||||||||||    
T  23796034 tggttgagcctaacacatccccataaaatcggcttgtgaggtgaggattgccc 23796086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 260 - 319
Target Start/End: Original strand, 34487303 - 34487362
Alignment:
Q  260 ctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  34487303 ctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 34487362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 407 - 514
Target Start/End: Complemental strand, 1596902 - 1596799
Alignment:
Q  407 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 506  Q
    ||||||| | |||||||||||  | |||| |||||||| || ||||||||||||  |||||| |||||||    ||||||||||| || | |||||||||    
T  1596902 gtggttgggcctaacacaaccctacaaaaccggcttgtaaggtgaggattgcccccacttataaaaacat----tgttaggccatgtcctgtccgatgtg 1596807  T
Q  507 ggactctt 514  Q
    ||||||||    
T  1596806 ggactctt 1596799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 477
Target Start/End: Complemental strand, 22574921 - 22574840
Alignment:
Q  395 ctctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 477  Q
    |||| ||| |||||||||| | ||||||||| |||| |||  ||||||||||| ||||||||||||| |||||| ||||||||    
T  22574921 ctcttagaaatcgtggttgggcctaacacaaactcacaaatacggcttgtgaggtgaggattgccctcacttat-aaaacatt 22574840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 319
Target Start/End: Original strand, 23177209 - 23177267
Alignment:
Q  261 tataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    |||||| ||||||||||| |||||||| ||||| | ||||||| |||||||||||||||    
T  23177209 tataatattcattttagtccttattttaagggattaaaatcaaatattctacatattac 23177267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 24580 - 24519
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| ||  |||||||||| | ||||||| |||||||||||||||    
T  24580 ccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattac 24519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 408 - 514
Target Start/End: Original strand, 3038095 - 3038197
Alignment:
Q  408 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgg 507  Q
    |||||| | ||||||||||| || |||| ||||||||||  ||||||||||||  |||||| || ||||    |||||| | ||||||||| ||||||||    
T  3038095 tggttgggcctaacacaaccccacaaaaccggcttgtgacgtgaggattgcccccacttataaacacat----tgttagacaatctcttattcgatgtgg 3038190  T
Q  508 gactctt 514  Q
    |||||||    
T  3038191 gactctt 3038197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 514
Target Start/End: Complemental strand, 17202256 - 17202150
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| |||| |||||||  |||||| || | ||    ||| |||||| |||||| |||||    
T  17202256 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgagatgagaattgcccccacttataaacaaat----tgtcaggccaactcttaaccgat 17202161  T
Q  504 gtgggactctt 514  Q
    |||||||||||    
T  17202160 gtgggactctt 17202150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 19157852 - 19157913
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    |||| |||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  19157852 ccctgtaatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 19157913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 20757251 - 20757312
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    |||| |||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  20757251 ccctgtaatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 20757312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 407 - 514
Target Start/End: Original strand, 21054963 - 21055066
Alignment:
Q  407 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 506  Q
    ||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  ||||||  |||||| |  ||| |||||||| | |||||||| ||    
T  21054963 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttat--aaacatat--tgtcaggccatcacctatccgatatg 21055058  T
Q  507 ggactctt 514  Q
    ||||||||    
T  21055059 ggactctt 21055066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 477
Target Start/End: Complemental strand, 25620213 - 25620140
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 477  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || |||||    
T  25620213 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacatt 25620140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 514
Target Start/End: Complemental strand, 29469682 - 29469576
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||| | ||||||||||| || |||| |||||||| || ||||||||||||  |||||| || ||||    ||| ||||||| || | ||||||    
T  29469682 atcgtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctgtccgat 29469587  T
Q  504 gtgggactctt 514  Q
    |||||||||||    
T  29469586 gtgggactctt 29469576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 31579655 - 31579594
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||| | | ||||||| |||||||||||||||    
T  31579655 ccctataatattcattttagtcctcattttgaggtactaaaatcaaatattctacatattac 31579594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 40729222 - 40729283
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||||| | |||| || |||||||||||||||    
T  40729222 ccctataatattcattttagttctcattttgagggactaaaattaaatattctacatattac 40729283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 407 - 468
Target Start/End: Complemental strand, 40746339 - 40746278
Alignment:
Q  407 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 468  Q
    ||||||| | ||||||||||| || ||||||||||| |||| ||||||||||||| ||||||    
T  40746339 gtggttgggcctaacacaaccccacaaaatcggcttatgaggtgaggattgccctcacttat 40746278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 477
Target Start/End: Original strand, 48243068 - 48243141
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 477  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || |||||    
T  48243068 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacatt 48243141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 22364875 - 22364816
Alignment:
Q  259 cctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    |||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  22364875 cctataatattcattttagtcct-attttgagggactaaaatcaaatattctacatattac 22364816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 407 - 455
Target Start/End: Complemental strand, 24432196 - 24432148
Alignment:
Q  407 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggat 455  Q
    |||||||||||||| ||||||||| |||||| ||||||||| |||||||    
T  24432196 gtggttgagtctaatacaacctcacaaaatcagcttgtgagatgaggat 24432148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 34027470 - 34027414
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  34027470 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 34027414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 459
Target Start/End: Complemental strand, 6782938 - 6782883
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcc 459  Q
    |||||||||||| ||||||||||| || |||| |||||||| || |||||||||||    
T  6782938 atcgtggttgagcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcc 6782883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 459
Target Start/End: Original strand, 36206070 - 36206125
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcc 459  Q
    |||||||||||| |||| |||||| ||||||| ||||||||||| ||| |||||||    
T  36206070 atcgtggttgagcctaatacaaccccataaaaccggcttgtgaggtgaagattgcc 36206125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 458
Target Start/End: Complemental strand, 4507009 - 4506955
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgc 458  Q
    ||||| |||| ||||||||||||| ||||||| || |||||||| ||||||||||    
T  4507009 atcgtagttgggtctaacacaaccccataaaaccgacttgtgaggtgaggattgc 4506955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 407 - 514
Target Start/End: Complemental strand, 21861368 - 21861265
Alignment:
Q  407 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 506  Q
    ||||||| | ||||||||| | || |||| |||||||| || ||||||||||||| |||||| || ||||    ||| ||||||| || | |||||||||    
T  21861368 gtggttgggcctaacacaatcccacaaaaccggcttgtaaggtgaggattgccctcacttataaacacat----tgtcaggccatgtcctgtccgatgtg 21861273  T
Q  507 ggactctt 514  Q
    ||||||||    
T  21861272 ggactctt 21861265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 407 - 477
Target Start/End: Complemental strand, 21861603 - 21861533
Alignment:
Q  407 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 477  Q
    ||||||| | ||||||||||| || ||||||||||||| || ||||||||||||  |||||| || |||||    
T  21861603 gtggttgggcctaacacaaccccacaaaatcggcttgtaaggtgaggattgcccccacttataaacacatt 21861533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 407 - 514
Target Start/End: Complemental strand, 47710517 - 47710414
Alignment:
Q  407 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 506  Q
    ||||||| | ||||||||||| || ||||  |||||||||| ||||||||||||  |||||| || ||||    ||| |||||||| | |||||||||||    
T  47710517 gtggttgggcctaacacaaccccacaaaactggcttgtgaggtgaggattgcccccacttataaacacat----tgtaaggccatcacctatccgatgtg 47710422  T
Q  507 ggactctt 514  Q
     |||||||    
T  47710421 agactctt 47710414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 407 - 514
Target Start/End: Complemental strand, 47722173 - 47722070
Alignment:
Q  407 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 506  Q
    ||||||| | ||||||||||| || ||||  |||||||||| ||||||||||||  |||||| || ||||    ||| |||||||| | |||||||||||    
T  47722173 gtggttgggcctaacacaaccccacaaaactggcttgtgaggtgaggattgcccccacttataaacacat----tgtaaggccatcacctatccgatgtg 47722078  T
Q  507 ggactctt 514  Q
     |||||||    
T  47722077 agactctt 47722070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 460
Target Start/End: Complemental strand, 21822117 - 21822064
Alignment:
Q  407 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    ||||||| ||||||||||| | || |||||| ||||||||| ||||||||||||    
T  21822117 gtggttgggtctaacacaaacccacaaaatctgcttgtgagatgaggattgccc 21822064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 22954564 - 22954503
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||| | || ||||||||||| |  |||||| |||||||||||||||    
T  22954564 ccctataatattcattttaatcctcattttgagggactagaatcaaatattctacatattac 22954503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 514
Target Start/End: Complemental strand, 29469917 - 29469811
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||| | ||||||||||  || |||| |||||||| || ||||||||||||  |||||| || ||||    ||| ||||||| || | ||||||    
T  29469917 atcgtggttgggcctaacacaactccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctgtccgat 29469822  T
Q  504 gtgggactctt 514  Q
    |||||||||||    
T  29469821 gtgggactctt 29469811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 514
Target Start/End: Original strand, 33996318 - 33996424
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||| | ||||||||||  || |||| || |||||||| ||| ||||||||  |||||| || ||||| |    |||||||| || ||||||||    
T  33996318 atcgtggttgggcctaacacaactccacaaaaccgacttgtgaggtgaagattgcccccacttataaatacattat----taggccatgtcctatccgat 33996413  T
Q  504 gtgggactctt 514  Q
    |||||||||||    
T  33996414 gtgggactctt 33996424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 34595543 - 34595482
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||| ||| || ||||||||||| | || |||| |||||||||||||||    
T  34595543 ccctataatattcatttcagtcctcattttgagggactaaattcaaatattctacatattac 34595482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 456
Target Start/End: Original strand, 40991754 - 40991803
Alignment:
Q  407 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggatt 456  Q
    |||||||||||||||||||||||| |||| | | ||||||| ||||||||    
T  40991754 gtggttgagtctaacacaacctcacaaaaccagattgtgagatgaggatt 40991803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 477
Target Start/End: Original strand, 48243448 - 48243517
Alignment:
Q  408 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 477  Q
    |||||| ||||||||||||| || |||| |||||||| || ||||||||||||  |||||| || |||||    
T  48243448 tggttgggtctaacacaaccccacaaaaccggcttgtaagatgaggattgcccccacttataaacacatt 48243517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 460
Target Start/End: Original strand, 2544454 - 2544510
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||| | ||||||||||| || |||| || |||||||| ||||||||||||    
T  2544454 atcgtggttgggcctaacacaaccccacaaaaccgacttgtgaggtgaggattgccc 2544510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 4886406 - 4886350
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||| | |||||||||||||   ||| ||||||||||| ||||||||||||    
T  4886406 atcgtggttgggcctaacacaacctcgccaaaccggcttgtgaggtgaggattgccc 4886350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 468
Target Start/End: Complemental strand, 10903162 - 10903098
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 468  Q
    |||||||||| | ||||||||||  || |||| ||||||||||| |||||||| ||| |||||||    
T  10903162 atcgtggttggggctaacacaactccacaaaaccggcttgtgaggtgaggattacccctacttat 10903098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 456
Target Start/End: Original strand, 21311415 - 21311455
Alignment:
Q  416 tctaacacaacctcataaaatcggcttgtgagctgaggatt 456  Q
    |||||||||||||||||||||||  ||||||| ||||||||    
T  21311415 tctaacacaacctcataaaatcgatttgtgagatgaggatt 21311455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 460
Target Start/End: Original strand, 31257038 - 31257094
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||||||||||||||||| || ||||  || ||||||| ||| ||||||||    
T  31257038 atcgtggttgagtctaacacaaccccacaaaactggtttgtgaggtgaagattgccc 31257094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 417 - 477
Target Start/End: Original strand, 31485679 - 31485739
Alignment:
Q  417 ctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 477  Q
    |||||||||| ||| |||| |||||||| || ||||||||||||  |||||| ||||||||    
T  31485679 ctaacacaacttcacaaaaccggcttgtcaggtgaggattgcccccacttataaaaacatt 31485739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 395 - 514
Target Start/End: Complemental strand, 9705340 - 9705225
Alignment:
Q  395 ctctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctc 494  Q
    |||| ||| |||||||||| ||||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||||| ||||| ||    
T  9705340 ctcttagaaatcgtggttgggtctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgttaagccatgtc 9705245  T
Q  495 ttatccgatgtgggactctt 514  Q
     |||||||||||||||||||    
T  9705244 ctatccgatgtgggactctt 9705225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 404 - 514
Target Start/End: Original strand, 12329951 - 12330057
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||| | |||||||||||||| |||||| ||||||||| ||||||||||||  |||||| || ||||    |||||   ||| |||||||||||    
T  12329951 atcgtggttgggcctaacacaacctcacaaaatcagcttgtgaggtgaggattgcccccacttataaacacat----tgttatatcatatcttatccgat 12330046  T
Q  504 gtgggactctt 514  Q
    |||||||||||    
T  12330047 gtgggactctt 12330057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 21690799 - 21690743
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||||| ||||||||||| || |||||||||||||||| ||||||||||||    
T  21690799 atcgtggttgagcctaacacaaccccacaaaatcggcttgtgaggtgaggattgccc 21690743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 395 - 514
Target Start/End: Complemental strand, 6054489 - 6054374
Alignment:
Q  395 ctctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctc 494  Q
    |||| ||| |||||||||| |||||||||||||  | |||||||| ||||||| ||||||||||||  |||||| || || |    ||| || |||||||    
T  6054489 ctcttagaaatcgtggttgggtctaacacaaccctacaaaatcggtttgtgaggtgaggattgcccccacttataaatacct----tgtcagaccatctc 6054394  T
Q  495 ttatccgatgtgggactctt 514  Q
    ||||||||||| ||||||||    
T  6054393 ttatccgatgttggactctt 6054374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 3484943 - 3485004
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  3484943 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 3485004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 514
Target Start/End: Original strand, 4868584 - 4868690
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||||||| || | ||||||    
T  4868584 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctgtccgat 4868679  T
Q  504 gtgggactctt 514  Q
    |||||||||||    
T  4868680 gtgggactctt 4868690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 5404729 - 5404790
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  5404729 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 5404790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 514
Target Start/End: Original strand, 6542950 - 6543056
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||| ||||||||||||| || |||| |||||| |||| ||| ||||||||  |||||| || ||||    ||| || ||||||||||||||||    
T  6542950 atcgtggttgggtctaacacaaccccacaaaaccggcttctgaggtgatgattgcccccacttataaacacat----tgtcagaccatctcttatccgat 6543045  T
Q  504 gtgggactctt 514  Q
    |||| ||||||    
T  6543046 gtggaactctt 6543056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 514
Target Start/End: Original strand, 12330298 - 12330403
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||| | |||||||||||||| |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| || |||| || ||||||||    
T  12330298 atcgtggttgggcctaacacaacctcacaaaaccggcttgtgagatgaggattgccc-cacttataaacacat----tgtcagaccatgtcctatccgat 12330392  T
Q  504 gtgggactctt 514  Q
    |||||||||||    
T  12330393 gtgggactctt 12330403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 514
Target Start/End: Original strand, 25065101 - 25065207
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    ||||| |||| | ||||||||||| || |||| ||||||||||| |||||||||||| |||||||  |||||| |  ||| || |||| || ||||||||    
T  25065101 atcgtagttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccctacttat--aaacatat--tgtcagaccatgtcctatccgat 25065196  T
Q  504 gtgggactctt 514  Q
    |||||||||||    
T  25065197 gtgggactctt 25065207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 319
Target Start/End: Original strand, 28853647 - 28853705
Alignment:
Q  261 tataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    |||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  28853647 tataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 28853705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 407 - 514
Target Start/End: Complemental strand, 33494613 - 33494510
Alignment:
Q  407 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 506  Q
    ||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || | ||||    | | |||||||| |||||||||||    
T  33494613 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacatattt----tcaagccatctcctatccgatgtg 33494518  T
Q  507 ggactctt 514  Q
    ||||||||    
T  33494517 ggactctt 33494510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 477
Target Start/End: Original strand, 4868820 - 4868893
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 477  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || |||||    
T  4868820 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacatt 4868893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 8926346 - 8926407
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || |||||||| || | ||||||| |||||||||||||||    
T  8926346 ccctataatattcattttagtcctcattttgagagactaaaatcaaatattctacatattac 8926407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 477
Target Start/End: Original strand, 12330186 - 12330259
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 477  Q
    |||||||||| | |||||||||||||| |||| ||||||||||| ||||| ||||||  |||||| || |||||    
T  12330186 atcgtggttgggcctaacacaacctcacaaaaccggcttgtgaggtgagggttgcccccacttataaacacatt 12330259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 262 - 319
Target Start/End: Original strand, 17238197 - 17238254
Alignment:
Q  262 ataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  17238197 ataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 17238254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 19661573 - 19661512
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| |||||||||||  | ||||||||||| | ||||||| |||||||||||||||    
T  19661573 ccctataatattcattttagtcttcattttgagggactaaaatcaaatattctacatattac 19661512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 29819545 - 29819606
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||||| | |||| || |||||||||||||||    
T  29819545 ccctataatattcattttagtcctcattttgagggactaaaattaaatattctacatattac 29819606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 519
Target Start/End: Complemental strand, 30256889 - 30256779
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  ||||||  |||||| |  ||| ||| |||| | ||||||||    
T  30256889 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc-cacttat--aaacatat--tgtcaggtcatcacctatccgat 30256795  T
Q  504 gtgggactctttaaca 519  Q
    ||||||||||| ||||    
T  30256794 gtgggactcttaaaca 30256779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 30609090 - 30609029
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| ||  |||||||||| | ||||||| |||||||||||||||    
T  30609090 ccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattac 30609029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 263 - 319
Target Start/End: Original strand, 4601117 - 4601173
Alignment:
Q  263 taatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    |||| |||||||||||  ||||||||||||| | ||||||| |||||||||||||||    
T  4601117 taatattcattttagtctttattttgagggactaaaatcaaatattctacatattac 4601173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 405 - 514
Target Start/End: Original strand, 6237715 - 6237815
Alignment:
Q  405 tcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatg 504  Q
    ||||| ||||||||||||||||||||      ||||||||||| ||||||||||||| |||||| || ||||    ||| ||||| || ||||||| |||    
T  6237715 tcgtgattgagtctaacacaacctcac-----cggcttgtgaggtgaggattgccctcacttataaatacat----tgtcaggccttcacttatccaatg 6237805  T
Q  505 tgggactctt 514  Q
    ||||||||||    
T  6237806 tgggactctt 6237815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 8026466 - 8026410
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  8026466 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 8026410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 8026681 - 8026625
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  8026681 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 8026625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 247 - 319
Target Start/End: Original strand, 16525341 - 16525413
Alignment:
Q  247 ttgaaatttaaccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    |||||||| | | |||||||  |||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  16525341 ttgaaattgatctctataatactcattttagtcctcattttgagggactaaaatcaaatattctacatattac 16525413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 415 - 477
Target Start/End: Complemental strand, 4906872 - 4906810
Alignment:
Q  415 gtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 477  Q
    ||||||||||| | |||||||  |||||||||| ||||||||||||| |||||| || |||||    
T  4906872 gtctaacacaatcccataaaactggcttgtgagatgaggattgccctcacttataaacacatt 4906810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 407 - 514
Target Start/End: Complemental strand, 13353275 - 13353172
Alignment:
Q  407 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 506  Q
    ||||||| | ||||||||||| || |||| |||||||| || ||||||||||||  |||||| || ||||    ||| ||||||| || | |||||||||    
T  13353275 gtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctgtccgatgtg 13353180  T
Q  507 ggactctt 514  Q
    ||||||||    
T  13353179 ggactctt 13353172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 319
Target Start/End: Original strand, 31717337 - 31717395
Alignment:
Q  261 tataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    |||||| ||||||||||| || ||||||||||| | ||| ||| |||||||||||||||    
T  31717337 tataatattcattttagtcctcattttgagggactaaaaacaaatattctacatattac 31717395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 407 - 514
Target Start/End: Complemental strand, 33796400 - 33796297
Alignment:
Q  407 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 506  Q
    ||||||| | ||||||||||| || |||| |||||||| || ||||||||||||  |||||| || ||||    ||| ||||||| || | |||||||||    
T  33796400 gtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctgtccgatgtg 33796305  T
Q  507 ggactctt 514  Q
    ||||||||    
T  33796304 ggactctt 33796297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 5923986 - 5924047
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||| ||| ||||||||||| ||  |||||||||| | ||||||| |||||||||||||||    
T  5923986 ccctagaatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattac 5924047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 7915926 - 7915872
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||| ||||||||  ||| || |||||||||||||||| ||||||||||||    
T  7915926 atcgtggttgggtctaaca--accccacaaaatcggcttgtgaggtgaggattgccc 7915872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 8936603 - 8936664
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| ||  ||||||| || | ||||||| |||||||||||||||    
T  8936603 ccctataatattcattttagtcctcgttttgagagactaaaatcaaatattctacatattac 8936664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 460
Target Start/End: Complemental strand, 20830820 - 20830771
Alignment:
Q  411 ttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||||||||||||| |||||| | ||||||| ||| ||||||||    
T  20830820 ttgagtctaacacaacctcacaaaatcagtttgtgaggtgatgattgccc 20830771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 315
Target Start/End: Complemental strand, 33783621 - 33783564
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 315  Q
    ||||||||| ||| ||||||| || ||||||||||| | ||||||| |||||||||||    
T  33783621 ccctataatattctttttagtcctcattttgagggactaaaatcaaatattctacata 33783564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 417 - 477
Target Start/End: Original strand, 5648692 - 5648752
Alignment:
Q  417 ctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 477  Q
    |||||||||||||| |||| ||||||||||| ||| ||||| ||||| |||| || |||||    
T  5648692 ctaacacaacctcacaaaaccggcttgtgaggtgatgattgtccttaattataaacacatt 5648752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 11721982 - 11721926
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||| | ||||||||||| || |||| |||||| |||| ||||||||||||    
T  11721982 atcgtggttgggcctaacacaaccccacaaaaccggcttatgaggtgaggattgccc 11721926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 417 - 514
Target Start/End: Original strand, 17147680 - 17147773
Alignment:
Q  417 ctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactctt 514  Q
    |||||| |||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||| ||| || |||||||||||||||||||    
T  17147680 ctaacataaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaatacat----tgtcaggtcatgtcctatccgatgtgggactctt 17147773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 468
Target Start/End: Complemental strand, 20373647 - 20373584
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 468  Q
    |||||||||| | ||||||||||| || ||||| |||||||||| ||||||||||| | ||||||    
T  20373647 atcgtggttgggcctaacacaaccccacaaaat-ggcttgtgaggtgaggattgccatcacttat 20373584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 30256655 - 30256599
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||| | ||||||||||| || |||| ||| ||||||| ||||||||||||    
T  30256655 atcgtggttgggcctaacacaaccccacaaaaccggtttgtgagttgaggattgccc 30256599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 6e-17; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 404 - 514
Target Start/End: Complemental strand, 54368593 - 54368487
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||| ||||||||||||| ||||||| ||||||||||| ||||||||||||  |||||| || |||||||     |||||||||  |||| |||    
T  54368593 atcgtggttgggtctaacacaaccccataaaaccggcttgtgaggtgaggattgcccccacttataaacacattttc----aggccatcttctatcggat 54368498  T
Q  504 gtgggactctt 514  Q
    |||||||||||    
T  54368497 gtgggactctt 54368487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 404 - 519
Target Start/End: Original strand, 45138978 - 45139089
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||| |||| |||||||| || |||| ||||||||||| ||||||||||||  |||||| || || |    ||| ||||||||||||||| |||    
T  45138978 atcgtggttgggtcttacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttattaacacgt----tgtcaggccatctcttatcagat 45139073  T
Q  504 gtgggactctttaaca 519  Q
    |||||||| |||||||    
T  45139074 gtgggactatttaaca 45139089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 16056507 - 16056568
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| |||||||||||||| | ||||||| |||||||||||||||    
T  16056507 ccctataatattcattttagtccttattttgagggactaaaatcaaatattctacatattac 16056568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 247 - 319
Target Start/End: Complemental strand, 46962817 - 46962745
Alignment:
Q  247 ttgaaatttaaccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    |||||||| | ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  46962817 ttgaaattgatccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 46962745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 514
Target Start/End: Original strand, 20327621 - 20327727
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||||||| || ||||||||    
T  20327621 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaatacat----tgtcaggccatgtcctatccgat 20327716  T
Q  504 gtgggactctt 514  Q
    |||||| ||||    
T  20327717 gtgggattctt 20327727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 26582836 - 26582775
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  26582836 ccctataatattcattttagtcctcattttgagggattaaaatcaaatattctacatattac 26582775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 27934610 - 27934671
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  27934610 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 27934671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 32315600 - 32315539
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  32315600 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 32315539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 514
Target Start/End: Original strand, 35038201 - 35038307
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| |||||||| |||  |||||| || ||||    ||| |||||||| | ||||||||    
T  35038201 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatttcccccacttataaacacat----tgtcaggccatcacctatccgat 35038296  T
Q  504 gtgggactctt 514  Q
    |||||||||||    
T  35038297 gtgggactctt 35038307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 52835704 - 52835765
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  52835704 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 52835765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 519
Target Start/End: Original strand, 45138800 - 45138920
Alignment:
Q  395 ctctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctc 494  Q
    |||| ||| |||||||||| |||| | |||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||  || |||||||    
T  45138800 ctctaagaaatcgtggttgggtctcatacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgccagaccatctc 45138895  T
Q  495 ttatccgatgtgggactctttaaca 519  Q
    ||||||||||||||||  |||||||    
T  45138896 ttatccgatgtgggacaatttaaca 45138920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 33162541 - 33162483
Alignment:
Q  261 tataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    |||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  33162541 tataatattcattttagtcctcattttgagggattaaaatcaaatattctacatattac 33162483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 407 - 514
Target Start/End: Original strand, 38791460 - 38791563
Alignment:
Q  407 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 506  Q
    ||||||| | ||||||||||| || |||||||  ||||||| ||||||||| ||| |||||| || ||||    ||| || ||||||| |||||||||||    
T  38791460 gtggttgggcctaacacaaccccacaaaatcgatttgtgaggtgaggattgtcctcacttataaatacat----tgtcagaccatctcctatccgatgtg 38791555  T
Q  507 ggactctt 514  Q
    ||||||||    
T  38791556 ggactctt 38791563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 14546060 - 14545999
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| || ||||||||||||    
T  14546060 ccctataatattcattttagttctcattttgagggactaaaatcaaatactctacatattac 14545999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 514
Target Start/End: Original strand, 16926956 - 16927062
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    ||||||||||||  |||||||||| || |||| ||||||||||| |||||||| |||  |||||| || ||||    ||| ||||||| |  ||||||||    
T  16926956 atcgtggttgagcttaacacaaccccacaaaaccggcttgtgagatgaggattacccccacttataaacacat----tgtcaggccatgttctatccgat 16927051  T
Q  504 gtgggactctt 514  Q
    |||||||||||    
T  16927052 gtgggactctt 16927062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 514
Target Start/End: Original strand, 20303071 - 20303177
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||||| ||||||||| | || |||| ||| ||||||| ||||||||||||  |||||| || ||||    ||| ||||||| || ||||||||    
T  20303071 atcgtggttgagcctaacacaatcccacaaaaccggtttgtgaggtgaggattgcccccacttataaatacat----tgtcaggccatgtcatatccgat 20303166  T
Q  504 gtgggactctt 514  Q
    |||||| ||||    
T  20303167 gtgggattctt 20303177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 407 - 513
Target Start/End: Complemental strand, 22729174 - 22729072
Alignment:
Q  407 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 506  Q
    ||||||| | |||||||||||||| |||| ||||||||||  ||||||||||||  |||| | || ||||    ||| || ||||||| |||||||||||    
T  22729174 gtggttgggcctaacacaacctcacaaaaccggcttgtgaagtgaggattgcccccacttgtaaacacat----tgtcagaccatctcctatccgatgtg 22729079  T
Q  507 ggactct 513  Q
    |||||||    
T  22729078 ggactct 22729072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 29838518 - 29838457
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| ||  |||||||||| | ||||||| |||||||||||||||    
T  29838518 ccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattac 29838457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 49500002 - 49500063
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| ||  |||||||||| | ||||||| |||||||||||||||    
T  49500002 ccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattac 49500063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 50645631 - 50645692
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| ||  |||||||||| | ||||||| |||||||||||||||    
T  50645631 ccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattac 50645692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 460
Target Start/End: Original strand, 1723083 - 1723139
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  1723083 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 1723139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 11589862 - 11589806
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  11589862 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 11589806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 31317305 - 31317249
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||||| ||||||||| | || |||| ||||||||||| ||||||||||||    
T  31317305 atcgtggttgagcctaacacaatcccacaaaaccggcttgtgaggtgaggattgccc 31317249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 405 - 514
Target Start/End: Original strand, 35038436 - 35038541
Alignment:
Q  405 tcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatg 504  Q
    ||||||||| | ||||||||||| || |||| | |||||| || ||||||||||||  |||||| || ||||    ||| |||||||| | |||||||||    
T  35038436 tcgtggttgggcctaacacaaccccacaaaaccagcttgtcaggtgaggattgcccccacttataaacacat----tgtcaggccatcacctatccgatg 35038531  T
Q  505 tgggactctt 514  Q
    ||||||||||    
T  35038532 tgggactctt 35038541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 258 - 318
Target Start/End: Original strand, 49121875 - 49121935
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatatta 318  Q
    ||||||||| |||| |||||| || ||||||||||| | ||||||| ||||||||||||||    
T  49121875 ccctataatattcactttagtcctcattttgagggactaaaatcaaatattctacatatta 49121935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 459
Target Start/End: Complemental strand, 24866274 - 24866219
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcc 459  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| |||||||||||    
T  24866274 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcc 24866219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 460
Target Start/End: Complemental strand, 45828083 - 45828040
Alignment:
Q  417 ctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||||||| |||| ||||||||||| ||||||||||||    
T  45828083 ctaacacaacctcacaaaaccggcttgtgaggtgaggattgccc 45828040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 319
Target Start/End: Original strand, 55092368 - 55092427
Alignment:
Q  260 ctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||| ||||||||||| || ||||||||||| | ||||||| ||||||| |||||||    
T  55092368 ctataatattcattttagtcctcattttgagggactaaaatcaaatattctatatattac 55092427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 394 - 460
Target Start/End: Complemental strand, 34610648 - 34610582
Alignment:
Q  394 actctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    ||||| ||| || ||||||| ||||||||||||| || |||| || |||||||| ||||||||||||    
T  34610648 actcttagaaattgtggttgggtctaacacaaccccacaaaaccgacttgtgaggtgaggattgccc 34610582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 456
Target Start/End: Original strand, 13741111 - 13741160
Alignment:
Q  407 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggatt 456  Q
    ||||||| ||||||||||||| || |||| ||||||||||| ||||||||    
T  13741111 gtggttgggtctaacacaaccccaaaaaaccggcttgtgaggtgaggatt 13741160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 514
Target Start/End: Complemental strand, 16239668 - 16239562
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||| | ||||||||| | || |||| ||||||||||| ||||| ||||||  |||||| || ||||    ||| ||||||| || ||||||||    
T  16239668 atcgtggttgggcctaacacaatcccacaaaaccggcttgtgaggtgaggtttgcccccacttataaacacat----tgtcaggccatgtcctatccgat 16239573  T
Q  504 gtgggactctt 514  Q
    ||| |||||||    
T  16239572 gtgagactctt 16239562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 514
Target Start/End: Original strand, 20327860 - 20327962
Alignment:
Q  408 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgg 507  Q
    |||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || | ||    ||| |||||| ||| || |||||||||    
T  20327860 tggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaat----tgtcaggccaactcctaaccgatgtgg 20327955  T
Q  508 gactctt 514  Q
    |||||||    
T  20327956 gactctt 20327962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 38807697 - 38807758
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || |||||||||||   ||||||| |||| ||||||||||    
T  38807697 ccctataatattcattttagtcctcattttgagggacaaaaatcaaatattttacatattac 38807758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 319
Target Start/End: Complemental strand, 42093615 - 42093558
Alignment:
Q  262 ataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||| ||||||||||| || ||||||||||| | ||||||| |||||||| ||||||    
T  42093615 ataatattcattttagtcctcattttgagggactaaaatcaaatattctacgtattac 42093558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 477
Target Start/End: Complemental strand, 54567969 - 54567896
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 477  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| |||||||| |||  |||||| || |||||    
T  54567969 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatttcccccacttataaacacatt 54567896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 4155401 - 4155345
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||| | ||||||||||| || |||| |||||| |||| ||||||||||||    
T  4155401 atcgtggttgggcctaacacaaccccacaaaaccggcttttgaggtgaggattgccc 4155345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 456
Target Start/End: Original strand, 6487340 - 6487392
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggatt 456  Q
    |||||||||| | |||| |||||| ||||||| ||||||||||| ||||||||    
T  6487340 atcgtggttgggcctaaaacaaccccataaaaccggcttgtgaggtgaggatt 6487392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 247 - 319
Target Start/End: Original strand, 7029533 - 7029605
Alignment:
Q  247 ttgaaatttaaccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    |||||||| | ||||||||| |||| |||||| || ||||||||  | | ||||||| |||||||||||||||    
T  7029533 ttgaaattgatccctataatattcaatttagtcctcattttgagaaattaaaatcaaatattctacatattac 7029605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 464
Target Start/End: Complemental strand, 33205542 - 33205482
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttac 464  Q
    |||||||||| | ||||||||||| |  ||||  |||||||||| ||||||||||||||||    
T  33205542 atcgtggttgggcctaacacaaccccgcaaaactggcttgtgaggtgaggattgcccttac 33205482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 460
Target Start/End: Original strand, 50052546 - 50052602
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||| | ||||||||||| || |||| ||||||||||  ||||||||||||    
T  50052546 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaagtgaggattgccc 50052602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 520
Target Start/End: Complemental strand, 50930768 - 50930667
Alignment:
Q  415 gtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactctt 514  Q
    |||| |||||||| || |||| ||  ||||||| ||||||||||||  |||||| || |||| |||    ||||||||| ||||| ||||||||| ||||    
T  50930768 gtcttacacaaccccacaaaaccgttttgtgaggtgaggattgcccccacttataaacacatgtta----aggccatcttttatcagatgtgggagtctt 50930673  T
Q  515 taacag 520  Q
    ||||||    
T  50930672 taacag 50930667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 247 - 319
Target Start/End: Original strand, 7133273 - 7133345
Alignment:
Q  247 ttgaaatttaaccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    |||||||| | ||||||||| ||||||||||| || ||||||||||||| ||||||| |||||||||||||||    
T  7133273 ttgaaattgatccctataatattcattttagtcctcattttgagggagtaaaatcaaatattctacatattac 7133345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 407 - 514
Target Start/End: Original strand, 24346511 - 24346614
Alignment:
Q  407 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 506  Q
    ||||||||| ||||||||||| ||||||| ||||||||||| |||||||| |||  |||||| || ||||    ||| ||||||| || |||||||||||    
T  24346511 gtggttgagcctaacacaaccccataaaaccggcttgtgaggtgaggattacccccacttataaacacat----tgtcaggccatgtcctatccgatgtg 24346606  T
Q  507 ggactctt 514  Q
    ||||||||    
T  24346607 ggactctt 24346614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 404 - 520
Target Start/End: Original strand, 1564574 - 1564686
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||||| ||||||||||| || ||||  | |||||||  ||||||||||||  |||||| |  |||||    || || ||||||||||||||||    
T  1564574 atcgtggttgagcctaacacaaccccacaaaactgtcttgtgatgtgaggattgcccccacttataatcacatt----gtcagaccatctcttatccgat 1564669  T
Q  504 gtgggactctttaacag 520  Q
    |||||||||||||||||    
T  1564670 gtgggactctttaacag 1564686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 394 - 514
Target Start/End: Original strand, 41666754 - 41666870
Alignment:
Q  394 actctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatct 493  Q
    ||||| ||| |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||||||| |    
T  41666754 actcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatgt 41666849  T
Q  494 cttatccgatgtgggactctt 514  Q
    | | |||||||||||||||||    
T  41666850 cctgtccgatgtgggactctt 41666870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 408 - 519
Target Start/End: Complemental strand, 15438950 - 15438843
Alignment:
Q  408 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgg 507  Q
    ||||||||||||||||||||  | |||||||||||||||| ||||||||||||  |||||| || ||||    | | || ||||||| |||||||||||     
T  15438950 tggttgagtctaacacaaccctagaaaatcggcttgtgaggtgaggattgcccccacttataaacacat----tatcagaccatctcatatccgatgtga 15438855  T
Q  508 gactctttaaca 519  Q
     |||||||||||    
T  15438854 aactctttaaca 15438843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 407 - 514
Target Start/End: Original strand, 24269881 - 24269983
Alignment:
Q  407 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 506  Q
    ||||||||| ||||||||||| ||||||| ||||||||||| |||||||| |||  |||||| || ||||    ||| ||||||| || |||||||||||    
T  24269881 gtggttgagcctaacacaaccccataaaaccggcttgtgaggtgaggattaccc-cacttataaacacat----tgtcaggccatgtcctatccgatgtg 24269975  T
Q  507 ggactctt 514  Q
    ||||||||    
T  24269976 ggactctt 24269983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 404 - 519
Target Start/End: Complemental strand, 28510168 - 28510057
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||| | ||||||||||| || |||| |||||| |||| ||||||||||| | |||||| || ||||    ||| ||| ||||||||||| |||    
T  28510168 atcgtggttgggcctaacacaaccccacaaaaccggcttatgagatgaggattgccttcacttataaacacat----tgtcaggtcatctcttatctgat 28510073  T
Q  504 gtgggactctttaaca 519  Q
    || |||||||||||||    
T  28510072 gttggactctttaaca 28510057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 6497351 - 6497412
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  6497351 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 6497412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 10461569 - 10461508
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  10461569 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 10461508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 22394348 - 22394287
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  22394348 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 22394287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 514
Target Start/End: Original strand, 24346744 - 24346850
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||| ||||||||||||| || |||| ||||||||||| |||| ||| |||  |||||| || ||||    ||| ||||||| |||||| ||||    
T  24346744 atcgtggttgggtctaacacaaccccacaaaaccggcttgtgaggtgagtattacccccacttataaatacat----tgtcaggccatgtcttattcgat 24346839  T
Q  504 gtgggactctt 514  Q
    |||||||||||    
T  24346840 gtgggactctt 24346850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 514
Target Start/End: Original strand, 41667000 - 41667106
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||||||| || | ||||||    
T  41667000 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctgtccgat 41667095  T
Q  504 gtgggactctt 514  Q
    |||||||||||    
T  41667096 gtgggactctt 41667106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 468
Target Start/End: Original strand, 27133000 - 27133064
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 468  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||| ||||||    
T  27133000 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccctcacttat 27133064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 404 - 447
Target Start/End: Complemental strand, 9187363 - 9187320
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgag 447  Q
    |||||||||||||||||||||||| || ||||||||||||||||    
T  9187363 atcgtggttgagtctaacacaaccccacaaaatcggcttgtgag 9187320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 407 - 514
Target Start/End: Original strand, 17352445 - 17352547
Alignment:
Q  407 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 506  Q
    ||||||||| ||||| |||||||| |||| ||||||||||| ||| ||||||||  |||||| || ||||    ||| ||| |||||||||| |||||||    
T  17352445 gtggttgagcctaacgcaacctcacaaaaccggcttgtgaggtgatgattgcccccacttataaacacat----tgtcaggtcatctcttat-cgatgtg 17352539  T
Q  507 ggactctt 514  Q
    ||||||||    
T  17352540 ggactctt 17352547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 14868832 - 14868893
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| || |||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  14868832 ccctataatatttattttagtcctcattttgagggactaaaatcaaatattctacatattac 14868893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 18786205 - 18786144
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| ||||| |||||||||    
T  18786205 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattcgacatattac 18786144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 24491067 - 24491006
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| ||||||||| |||||    
T  24491067 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacacattac 24491006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 477
Target Start/End: Complemental strand, 24531676 - 24531603
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 477  Q
    |||||||||| |  |||||||||| || |||||||||||||||| ||||||||||||  |||||| || |||||    
T  24531676 atcgtggttgggcataacacaaccccacaaaatcggcttgtgaggtgaggattgcccccacttataaacacatt 24531603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 41137300 - 41137361
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || |||||| |||| | ||||||| |||||||||||||||    
T  41137300 ccctataatattcattttagtcctcattttgggggactaaaatcaaatattctacatattac 41137361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 407 - 519
Target Start/End: Complemental strand, 7369798 - 7369690
Alignment:
Q  407 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgtt-aggccatctcttatccgatgt 505  Q
    ||||||| | ||||||||||| || |||| ||||||||||| |||||| |||||  ||||||  ||||| ||   ||| | |||||||||||||| ||||    
T  7369798 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggactgcccccacttat--aaacactt---gttcatgccatctcttatccaatgt 7369704  T
Q  506 gggactctttaaca 519  Q
    ||||||||||||||    
T  7369703 gggactctttaaca 7369690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 468
Target Start/End: Original strand, 17015890 - 17015950
Alignment:
Q  408 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 468  Q
    |||||| | ||||||||||| || |||||||||||||||| |||| |||||||| ||||||    
T  17015890 tggttgggcctaacacaaccccacaaaatcggcttgtgaggtgagaattgccctcacttat 17015950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 19522397 - 19522341
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||| ||||||||||||| || |||||||||||||||| |||  |||||||    
T  19522397 atcgtggttgtgtctaacacaaccccacaaaatcggcttgtgaggtgattattgccc 19522341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 460
Target Start/End: Original strand, 25258101 - 25258157
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  25258101 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 25258157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 460
Target Start/End: Original strand, 25258308 - 25258364
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    ||||||||||||| |||||||||| || |||| || |||||||| ||||||||||||    
T  25258308 atcgtggttgagtttaacacaaccccacaaaaccgacttgtgaggtgaggattgccc 25258364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 460
Target Start/End: Original strand, 25321891 - 25321947
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  25321891 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 25321947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 460
Target Start/End: Original strand, 25322098 - 25322154
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    ||||||||||||| |||||||||| || |||| || |||||||| ||||||||||||    
T  25322098 atcgtggttgagtttaacacaaccccacaaaaccgacttgtgaggtgaggattgccc 25322154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 468
Target Start/End: Original strand, 38731623 - 38731674
Alignment:
Q  417 ctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 468  Q
    ||||||||||||||||||||||||||||||| ||  |||||| || ||||||    
T  38731623 ctaacacaacctcataaaatcggcttgtgaggtggtgattgctctcacttat 38731674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 415 - 477
Target Start/End: Original strand, 6413444 - 6413506
Alignment:
Q  415 gtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 477  Q
    ||||||||||||| || ||||||||||| |||| ||||||||||||  |||||| || |||||    
T  6413444 gtctaacacaaccccacaaaatcggcttatgaggtgaggattgcccccacttataaacacatt 6413506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 408 - 514
Target Start/End: Original strand, 8081124 - 8081227
Alignment:
Q  408 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattg-cccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 506  Q
    |||||| | ||||||||||| || |||| ||||||||||| ||||||||| |||  |||||| || ||||    ||| ||||||| || |||||||||||    
T  8081124 tggttgggcctaacacaaccccacaaaaccggcttgtgagatgaggattgccccccacttataaacacat----tgtcaggccatgtcctatccgatgtg 8081219  T
Q  507 ggactctt 514  Q
    ||||||||    
T  8081220 ggactctt 8081227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 407 - 514
Target Start/End: Complemental strand, 9368904 - 9368801
Alignment:
Q  407 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 506  Q
    ||||||| | ||||||||||| || | |||||||||||||  |||| |||||||  |||||| || |||||    || | |||||||| |||||||||||    
T  9368904 gtggttgggcctaacacaaccccacataatcggcttgtgaagtgagaattgcccccacttataaacacatt----gtcatgccatctcctatccgatgtg 9368809  T
Q  507 ggactctt 514  Q
    ||||||||    
T  9368808 ggactctt 9368801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 407 - 514
Target Start/End: Original strand, 18333475 - 18333578
Alignment:
Q  407 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 506  Q
    ||||||| | ||||||||||| || |||| ||||||||||| |||||||| |||  |||||| || ||||    ||| || ||||||| |||||||||||    
T  18333475 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattacccccacttataaacacat----tgtcagaccatctcctatccgatgtg 18333570  T
Q  507 ggactctt 514  Q
    ||| ||||    
T  18333571 ggattctt 18333578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 407 - 457
Target Start/End: Original strand, 38731848 - 38731898
Alignment:
Q  407 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattg 457  Q
    ||||||| | |||||||||||||| ||||||| |||||||| |||||||||    
T  38731848 gtggttgtgcctaacacaacctcacaaaatcgacttgtgaggtgaggattg 38731898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 3598572 - 3598633
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||| ||||||| || ||||||||||| | ||||||| |||||||| ||||||    
T  3598572 ccctataatattctttttagtcctcattttgagggactaaaatcaaatattctacgtattac 3598633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 4122801 - 4122740
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||| ||||  | ||||||| |||||||||||||||    
T  4122801 ccctataatattcattttagtcctcatttttagggtctaaaatcaaatattctacatattac 4122740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 5933349 - 5933288
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || |||||||  || | ||||||| |||||||||||||||    
T  5933349 ccctataatattcattttagtcctcattttgaatgactaaaatcaaatattctacatattac 5933288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 6542483 - 6542422
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||| | || ||||||| ||| | ||||||| |||||||||||||||    
T  6542483 ccctataatattcattttaatcctcattttgaaggactaaaatcaaatattctacatattac 6542422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 457
Target Start/End: Complemental strand, 20225118 - 20225065
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattg 457  Q
    |||||||||||  ||||||||||| || ||||||| |||||||| |||||||||    
T  20225118 atcgtggttgaacctaacacaaccccacaaaatcgacttgtgaggtgaggattg 20225065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 477
Target Start/End: Complemental strand, 21306964 - 21306891
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 477  Q
    |||||||||| ||||||||||| | || || | ||||||||||| ||||||||||||  |||||| || |||||    
T  21306964 atcgtggttgggtctaacacaatcccacaataccggcttgtgaggtgaggattgcccccacttataaatacatt 21306891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 477
Target Start/End: Complemental strand, 21314802 - 21314729
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 477  Q
    |||||||||| ||||||||||| | || || | ||||||||||| ||||||||||||  |||||| || |||||    
T  21314802 atcgtggttgggtctaacacaatcccacaataccggcttgtgaggtgaggattgcccccacttataaatacatt 21314729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 477
Target Start/End: Complemental strand, 24528613 - 24528544
Alignment:
Q  408 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 477  Q
    |||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || |||||    
T  24528613 tggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacatt 24528544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 315
Target Start/End: Original strand, 29991261 - 29991318
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 315  Q
    ||||||||| ||||||||||| || ||||| ||||| | ||||||| |||||||||||    
T  29991261 ccctataatattcattttagtcctcattttaagggactaaaatcaaatattctacata 29991318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 461
Target Start/End: Complemental strand, 43117959 - 43117902
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccct 461  Q
    ||||| |||| | |||||||||||  |||||| ||||||||||| |||||||||||||    
T  43117959 atcgttgttgggcctaacacaaccctataaaaccggcttgtgagatgaggattgccct 43117902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 8098394 - 8098338
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||| |  |||||||||| || |||| ||||||||||| ||||||||||||    
T  8098394 atcgtggttgggcttaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 8098338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 19522164 - 19522108
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||| ||| || |||||| || |||| ||||||||||| ||||||||||||    
T  19522164 atcgtggttgggtcaaatacaaccccacaaaaccggcttgtgaggtgaggattgccc 19522108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 456
Target Start/End: Original strand, 24487652 - 24487704
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggatt 456  Q
    |||||||||| |  ||||||||||||| |||| ||||||||||| ||||||||    
T  24487652 atcgtggttgggcttaacacaacctcacaaaaccggcttgtgaggtgaggatt 24487704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 460
Target Start/End: Original strand, 33337462 - 33337518
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||||  ||||||||||| || |||| ||| ||||||| ||||||||||||    
T  33337462 atcgtggttgaacctaacacaaccccacaaaaccggtttgtgagatgaggattgccc 33337518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0766 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 394 - 514
Target Start/End: Complemental strand, 6361 - 6245
Alignment:
Q  394 actctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatct 493  Q
    ||||| ||| |||||||||| | ||||||||||| || |||||||||||||||| ||||||||||||  |||||| || ||||    ||| || | ||||    
T  6361 actctaagaaatcgtggttgggcctaacacaaccccacaaaatcggcttgtgaggtgaggattgcccccacttataaacacat----tgtcagactatct 6266  T
Q  494 cttatccgatgtgggactctt 514  Q
    |||||| ||||||||||||||    
T  6265 cttatctgatgtgggactctt 6245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 417 - 520
Target Start/End: Original strand, 38447447 - 38447546
Alignment:
Q  417 ctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactcttta 516  Q
    ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||||||||||||||||| ||||||| ||||||    
T  38447447 ctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatctcttatccgttgtgggattcttta 38447542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 404 - 517
Target Start/End: Original strand, 22638186 - 22638295
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||| |  |||||||||| || |||| ||||||||| | |||||||||||| |||||||  ||||| ||  ||  |||||||||||||||||||    
T  22638186 atcgtggttgggcttaacacaaccccacaaaaccggcttgtgtggtgaggattgcccctacttat--aaacactt--tgacaggccatctcttatccgat 22638281  T
Q  504 gtgggactctttaa 517  Q
    ||| ||||||||||    
T  22638282 gtgagactctttaa 22638295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 3272879 - 3272940
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  3272879 ccctataatattcattttagtcctcattttgagggattaaaatcaaatattctacatattac 3272940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 13154398 - 13154459
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  13154398 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 13154459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 514
Target Start/End: Original strand, 15042677 - 15042783
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||||| ||||||||||| || |||||||| ||| ||| ||| ||||||||  |||||| || ||||    ||| ||||||| || ||||||||    
T  15042677 atcgtggttgagcctaacacaaccccacaaaatcggtttgcgaggtgatgattgcccccacttataaacacat----tgtcaggccatgtcgtatccgat 15042772  T
Q  504 gtgggactctt 514  Q
    |||||||||||    
T  15042773 gtgggactctt 15042783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 514
Target Start/End: Complemental strand, 17469895 - 17469789
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||||| ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || | ||    ||| |||||| ||| || |||||    
T  17469895 atcgtggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaat----tgtcaggccaactcctaaccgat 17469800  T
Q  504 gtgggactctt 514  Q
    |||||||||||    
T  17469799 gtgggactctt 17469789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 514
Target Start/End: Complemental strand, 17477142 - 17477036
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||||| ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || | ||    ||| |||||| ||| || |||||    
T  17477142 atcgtggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaat----tgtcaggccaactcctaaccgat 17477047  T
Q  504 gtgggactctt 514  Q
    |||||||||||    
T  17477046 gtgggactctt 17477036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 24332421 - 24332482
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  24332421 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 24332482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 408 - 514
Target Start/End: Original strand, 24532432 - 24532534
Alignment:
Q  408 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgg 507  Q
    |||||| | ||||||||||| || |||| ||||||||||| ||| ||||||||  |||||| || ||||    ||| |||||||||| ||||||||||||    
T  24532432 tggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattgcccccacttataaacacat----tgtcaggccatctcctatccgatgtgg 24532527  T
Q  508 gactctt 514  Q
    |||||||    
T  24532528 gactctt 24532534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 26479518 - 26479457
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  26479518 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 26479457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 31403137 - 31403076
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  31403137 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 31403076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 514
Target Start/End: Original strand, 39052936 - 39053042
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    ||||| |||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| |||||||| | ||||||||    
T  39052936 atcgttgttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatcacctatccgat 39053031  T
Q  504 gtgggactctt 514  Q
    |||||||||||    
T  39053032 gtgggactctt 39053042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 514
Target Start/End: Complemental strand, 39743606 - 39743500
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||| | ||||||||||| || |||||||||||||||| ||||||||||||  |||||| || | ||    ||| |||||| ||| || |||||    
T  39743606 atcgtggttgggcctaacacaaccccacaaaatcggcttgtgaggtgaggattgccccaacttataaacaaat----tgtcaggccaactcctaaccgat 39743511  T
Q  504 gtgggactctt 514  Q
    |||||||||||    
T  39743510 gtgggactctt 39743500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 20702874 - 20702818
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||| |||||||||||||||||||| |||| |||||| |||| ||||||||||||    
T  20702874 atcgtgattgagtctaacacaacctcacaaaaccggcttatgagatgaggattgccc 20702818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 394 - 514
Target Start/End: Complemental strand, 39960279 - 39960162
Alignment:
Q  394 actctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattg-cccttacttatcaaaacattttatgttaggccatc 492  Q
    ||||| ||| |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||| |||  |||||| || | ||||    | ||||||||    
T  39960279 actcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccccccacttataaacaaattt----tcaggccatc 39960184  T
Q  493 tcttatccgatgtgggactctt 514  Q
    || |||||||||||||||||||    
T  39960183 tcctatccgatgtgggactctt 39960162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 394 - 514
Target Start/End: Complemental strand, 10450087 - 10449971
Alignment:
Q  394 actctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatct 493  Q
    ||||| ||| |||||||||||| |||||||||||  | |||| |||||| |||| ||||||||||||  |||||| || ||||    ||| ||||||| |    
T  10450087 actcttagaaatcgtggttgagcctaacacaaccctacaaaaccggcttctgaggtgaggattgcccacacttataaacacat----tgtcaggccatgt 10449992  T
Q  494 cttatccgatgtgggactctt 514  Q
    | ||||||||||| |||||||    
T  10449991 cctatccgatgtgagactctt 10449971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 519
Target Start/End: Complemental strand, 8716187 - 8716080
Alignment:
Q  408 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgg 507  Q
    |||||| ||||||||||||| || ||||||||||| |||| ||||||||||| | |||| | || ||||    ||| || |||||||||||||||| ||     
T  8716187 tggttgggtctaacacaaccccacaaaatcggcttatgaggtgaggattgccttcacttttaaacacat----tgtgagaccatctcttatccgatatga 8716092  T
Q  508 gactctttaaca 519  Q
    || |||||||||    
T  8716091 gattctttaaca 8716080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 458
Target Start/End: Complemental strand, 34843194 - 34843140
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgc 458  Q
    ||||||||| |||||||||||||| || |||| ||||||||||| ||||||||||    
T  34843194 atcgtggttcagtctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 34843140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 400 - 457
Target Start/End: Complemental strand, 4828149 - 4828092
Alignment:
Q  400 agagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattg 457  Q
    |||||||||||||| | ||||||||||| || |||| ||||||||||| |||||||||    
T  4828149 agagatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattg 4828092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 407 - 513
Target Start/End: Original strand, 5590378 - 5590480
Alignment:
Q  407 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 506  Q
    ||||||| | |||||||||||||| |||| ||||||||||  ||||||||||||  |||| | || ||||    ||| || ||||||| |||||||||||    
T  5590378 gtggttgggcctaacacaacctcacaaaaccggcttgtgaagtgaggattgcccccacttgtaaacacat----tgtcagaccatctcctatccgatgtg 5590473  T
Q  507 ggactct 513  Q
    |||||||    
T  5590474 ggactct 5590480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 407 - 460
Target Start/End: Original strand, 18939307 - 18939360
Alignment:
Q  407 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    ||||||| | |||||||||||||| |||||| ||||||||| ||||||||||||    
T  18939307 gtggttgggcctaacacaacctcacaaaatcagcttgtgaggtgaggattgccc 18939360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 514
Target Start/End: Original strand, 19256593 - 19256699
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || | ||    ||| |||||| ||| || |||||    
T  19256593 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaat----tgtcaggccaactcctaaccgat 19256688  T
Q  504 gtgggactctt 514  Q
    |||||||||||    
T  19256689 gtgggactctt 19256699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 27993501 - 27993440
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| || |||||||| |||||||||||||| | ||||||| |||||||||| ||||    
T  27993501 ccctataatatttattttagttcttattttgagggactaaaatcaaatattctacatgttac 27993440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 28050803 - 28050742
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| || |||||||| |||||||||||||| | ||||||| |||||||||| ||||    
T  28050803 ccctataatatttattttagttcttattttgagggactaaaatcaaatattctacatgttac 28050742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 514
Target Start/End: Original strand, 28069364 - 28069470
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    ||||||||||  |||||||||||  || |||||| | ||||||| ||||||||||||  |||||| || ||||    ||| ||||||| || ||||||||    
T  28069364 atcgtggttggatctaacacaactccacaaaatcagtttgtgaggtgaggattgcccccacttataaatacat----tgtcaggccatgtcatatccgat 28069459  T
Q  504 gtgggactctt 514  Q
    |||||||||||    
T  28069460 gtgggactctt 28069470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 457
Target Start/End: Complemental strand, 29005941 - 29005888
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattg 457  Q
    |||||||||| |||||||||||||||||||| ||||||| |||  |||||||||    
T  29005941 atcgtggttgggtctaacacaacctcataaattcggcttatgaagtgaggattg 29005888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 31186535 - 31186592
Alignment:
Q  261 tataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatatta 318  Q
    |||||| ||||||||||| || ||||||||||| | ||||||| ||||||||||||||    
T  31186535 tataatattcattttagtcctcattttgagggactaaaatcaaatattctacatatta 31186592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 31685829 - 31685890
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| ||  |||||||||| | ||||||| |||||||||||||||    
T  31685829 ccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattac 31685890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 461
Target Start/End: Original strand, 42846612 - 42846669
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccct 461  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| |||||||||||||    
T  42846612 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccct 42846669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 460
Target Start/End: Original strand, 24075313 - 24075369
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  24075313 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 24075369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 487 - 519
Target Start/End: Original strand, 30201610 - 30201642
Alignment:
Q  487 gccatctcttatccgatgtgggactctttaaca 519  Q
    |||||||||||||||||||||||||||||||||    
T  30201610 gccatctcttatccgatgtgggactctttaaca 30201642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 519
Target Start/End: Complemental strand, 4828367 - 4828259
Alignment:
Q  407 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 506  Q
    ||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || | ||    ||| | |||| ||| || ||||||||    
T  4828367 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaat----tgtcatgccaactcctaaccgatgtg 4828272  T
Q  507 ggactctttaaca 519  Q
    |||||||||||||    
T  4828271 ggactctttaaca 4828259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 517
Target Start/End: Complemental strand, 37001303 - 37001194
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||| | ||||||||||  || |||| ||||||||||| ||||||||||||  || |||  ||||| ||  ||| |||||||||||  | ||||    
T  37001303 atcgtggttgggcctaacacaactccacaaaaccggcttgtgaggtgaggattgcccccacctat--aaacactt--tgtgaggccatctctcgttcgat 37001208  T
Q  504 gtgggactctttaa 517  Q
    ||||||||||||||    
T  37001207 gtgggactctttaa 37001194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 407 - 514
Target Start/End: Original strand, 11232204 - 11232307
Alignment:
Q  407 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 506  Q
    ||||||| | ||||||||||| || |||| |||||||| || ||||||||||||  |||||| || ||||    ||| ||||||| || | |||||||||    
T  11232204 gtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctgtccgatgtg 11232299  T
Q  507 ggactctt 514  Q
    ||||||||    
T  11232300 ggactctt 11232307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 460
Target Start/End: Original strand, 3157569 - 3157622
Alignment:
Q  407 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    ||||||||| ||||||||||| || ||||  |||||||||| ||||||||||||    
T  3157569 gtggttgagcctaacacaaccccacaaaactggcttgtgaggtgaggattgccc 3157622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 6891937 - 6891998
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| || |||||||| || ||||||||||| | |||| || |||||||||||||||    
T  6891937 ccctataatatttattttagtcctcattttgagggactaaaattaaatattctacatattac 6891998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 6943816 - 6943877
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||| ||| | ||||||| ||||||| |||||||    
T  6943816 ccctataatattcattttagtcctcattttgaaggactaaaatcaaatattctatatattac 6943877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 520
Target Start/End: Original strand, 8466810 - 8466843
Alignment:
Q  487 gccatctcttatccgatgtgggactctttaacag 520  Q
    |||||||||||||||||||| |||||||||||||    
T  8466810 gccatctcttatccgatgtgagactctttaacag 8466843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 477
Target Start/End: Complemental strand, 12688149 - 12688076
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 477  Q
    |||||| |||||||||||| |||  || |||| ||||||||||| || |||||||||| |||||| || |||||    
T  12688149 atcgtgtttgagtctaacataactccacaaaaccggcttgtgaggtggggattgccctcacttataaacacatt 12688076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 514
Target Start/End: Original strand, 19256827 - 19256933
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||| | ||||||||||| || |||| | ||||||||| ||||||||||||  |||||| || | ||    ||| |||||| ||| || |||||    
T  19256827 atcgtggttgggcctaacacaaccccacaaaacctgcttgtgaggtgaggattgcccccacttataaacaaat----tgtcaggccaactcctaaccgat 19256922  T
Q  504 gtgggactctt 514  Q
    |||||||||||    
T  19256923 gtgggactctt 19256933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 477
Target Start/End: Complemental strand, 20301338 - 20301265
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 477  Q
    |||||||||| | |||||||||||||| ||||  |||||||||| | ||||||||||  |||||| || |||||    
T  20301338 atcgtggttgggcctaacacaacctcacaaaacgggcttgtgaggttaggattgcccccacttataaacacatt 20301265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 477
Target Start/End: Complemental strand, 21087970 - 21087897
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 477  Q
    |||||||||| | |||||||||||||| ||||  |||||||||| | ||||||||||  |||||| || |||||    
T  21087970 atcgtggttgggcctaacacaacctcacaaaacgggcttgtgaggttaggattgcccccacttataaacacatt 21087897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 460
Target Start/End: Complemental strand, 27205246 - 27205181
Alignment:
Q  395 ctctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||| ||| |||||||||| | ||||||||||| || |||| |||||| |||| ||||||||||||    
T  27205246 ctcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttatgaggtgaggattgccc 27205181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 519
Target Start/End: Original strand, 29907815 - 29907844
Alignment:
Q  490 atctcttatccgatgtgggactctttaaca 519  Q
    ||||||||||||||||||||||||||||||    
T  29907815 atctcttatccgatgtgggactctttaaca 29907844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 477
Target Start/End: Original strand, 35682788 - 35682861
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 477  Q
    |||||||||| | ||||||||||| || |||| ||||||| ||| ||||||||||||  |||||| || |||||    
T  35682788 atcgtggttgggcctaacacaaccccacaaaaccggcttgcgaggtgaggattgcccccacttataaacacatt 35682861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 258 - 318
Target Start/End: Original strand, 9180204 - 9180264
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatatta 318  Q
    ||||||||| ||||||||||| ||  |||||||||| | ||||||| |||||||| |||||    
T  9180204 ccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacgtatta 9180264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 456
Target Start/End: Original strand, 10614946 - 10614998
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggatt 456  Q
    |||||||||||| |||| |||||| || |||||||||||||||| ||| ||||    
T  10614946 atcgtggttgagcctaatacaaccccacaaaatcggcttgtgaggtgaagatt 10614998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 10884141 - 10884086
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  10884141 atcgtggttgggcctaacacaacc-cacaaaaccggcttgtgaggtgaggattgccc 10884086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 452
Target Start/End: Original strand, 15686047 - 15686095
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgag 452  Q
    |||||||||||||||||||||| | || |||| ||||||||||| ||||    
T  15686047 atcgtggttgagtctaacacaatcccacaaaaccggcttgtgaggtgag 15686095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 27205041 - 27204985
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||| | ||||||||||| || |||| |||||| |||| ||||||||||||    
T  27205041 atcgtggttgggcctaacacaaccccacaaaaccggcttatgaggtgaggattgccc 27204985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 27205139 - 27205083
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||| | ||||||||||| || |||| |||||| |||| ||||||||||||    
T  27205139 atcgtggttgggcctaacacaaccccacaaaaccggcttatgaggtgaggattgccc 27205083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 416 - 519
Target Start/End: Original strand, 44118878 - 44118977
Alignment:
Q  416 tctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactcttt 515  Q
    |||||||||||| || ||||  |||||||||| |||||||| |||  |||||| || |||||    || |||||||||||||||||||||||||||||||    
T  44118878 tctaacacaaccccacaaaacgggcttgtgaggtgaggattacccccacttataaacacatt----gtcaggccatctcttatccgatgtgggactcttt 44118973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 404 - 514
Target Start/End: Complemental strand, 35788736 - 35788630
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||| | ||||||||||| ||||||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||||||| || |||| |||    
T  35788736 atcgtggttgggcctaacacaaccccataaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctatctgat 35788641  T
Q  504 gtgggactctt 514  Q
    |||||||||||    
T  35788640 gtgggactctt 35788630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 395 - 514
Target Start/End: Complemental strand, 35788980 - 35788865
Alignment:
Q  395 ctctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctc 494  Q
    |||| ||| |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||||||| |     
T  35788980 ctcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgagatgaggattgcccccacttataaacacat----tgtcaggccatgtt 35788885  T
Q  495 ttatccgatgtgggactctt 514  Q
     |||||||||||||||||||    
T  35788884 ctatccgatgtgggactctt 35788865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 989299 - 989238
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  989299 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 989238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 11021832 - 11021893
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  11021832 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 11021893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 17107591 - 17107652
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  17107591 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 17107652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 22487379 - 22487440
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  22487379 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 22487440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 514
Target Start/End: Complemental strand, 22827615 - 22827509
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||| | |||||||||||  | |||| ||||||||||| ||||||||||||  |||||| || || |    ||| |||||||||| ||||||||    
T  22827615 atcgtggttgggcctaacacaacccgacaaaaccggcttgtgaggtgaggattgcccccacttataaacacgt----tgtcaggccatctcctatccgat 22827520  T
Q  504 gtgggactctt 514  Q
    |||||||||||    
T  22827519 gtgggactctt 22827509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 46481076 - 46481137
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  46481076 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 46481137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 9685709 - 9685653
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||| | ||||||||||| ||||||| ||||||||||| ||||||||||||    
T  9685709 atcgtggttgggcctaacacaaccccataaaaccggcttgtgaggtgaggattgccc 9685653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 460
Target Start/End: Original strand, 12005476 - 12005532
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    ||||| |||| |||||||||||||||| |||| ||||||||||| ||||||||||||    
T  12005476 atcgttgttgggtctaacacaacctcacaaaaccggcttgtgaggtgaggattgccc 12005532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 318
Target Start/End: Original strand, 13683163 - 13683223
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatatta 318  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| ||||||||||||||    
T  13683163 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatatta 13683223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 394 - 514
Target Start/End: Original strand, 22845444 - 22845560
Alignment:
Q  394 actctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatct 493  Q
    ||||| ||| |||||||||| | ||||||||||| || |||| ||||||||||| |||||||| |||  |||||| || ||||    ||| ||||||| |    
T  22845444 actcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattacccccacttataaacacat----tgtcaggccatgt 22845539  T
Q  494 cttatccgatgtgggactctt 514  Q
    | |||| ||||||||||||||    
T  22845540 catatctgatgtgggactctt 22845560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 258 - 317
Target Start/End: Complemental strand, 46081598 - 46081539
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatatt 317  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||    
T  46081598 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatatt 46081539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 407 - 514
Target Start/End: Original strand, 39902573 - 39902676
Alignment:
Q  407 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 506  Q
    ||||||| | ||||||||||| || |||| | ||||||||| ||||||||||||  |||||| || ||||    ||| ||||||| || |||||||||||    
T  39902573 gtggttgggcctaacacaaccccacaaaaccagcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctatccgatgtg 39902668  T
Q  507 ggactctt 514  Q
    ||||||||    
T  39902669 ggactctt 39902676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 519
Target Start/End: Complemental strand, 53699093 - 53698993
Alignment:
Q  415 gtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactctt 514  Q
    ||||||||||||| |||||| |||| ||||||| ||||||||||||  ||||||  |||||| |  ||| ||  |||||||||| || ||||||||||||    
T  53699093 gtctaacacaaccccataaagtcggtttgtgaggtgaggattgcccacacttat--aaacatat--tgtcagatcatctcttattcgttgtgggactctt 53698998  T
Q  515 taaca 519  Q
    |||||    
T  53698997 taaca 53698993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 5721111 - 5721172
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||||| | |||| || |||||||||||||||    
T  5721111 ccctataatattcattttagtcctcattttgagggactaaaataaaatattctacatattac 5721172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 514
Target Start/End: Complemental strand, 6218516 - 6218410
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||||| |||||||||   ||||||| ||||||||||| ||| ||||||||  |||||| || ||||    ||||||| |||||| |||| |||    
T  6218516 atcgtggttgagcctaacacaattccataaaaccggcttgtgaggtgatgattgcccccacttataaacacat----tgttaggtcatctcctatctgat 6218421  T
Q  504 gtgggactctt 514  Q
    ||| |||||||    
T  6218420 gtgagactctt 6218410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 13493108 - 13493047
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||||| |||| |||| || ||||||||||| | ||||||| |||||||||||||||    
T  13493108 ccctataatgtacattgtagtcctcattttgagggactaaaatcaaatattctacatattac 13493047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 16491806 - 16491867
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    |||||| || ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  16491806 ccctatgatattcattttagtcctcattttgagggattaaaatcaaatattctacatattac 16491867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 16959988 - 16959927
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| ||  |||||||||| | ||||||| |||||||||||||||    
T  16959988 ccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattac 16959927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 17865135 - 17865196
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| ||  |||||||||| | ||||||| |||||||||||||||    
T  17865135 ccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattac 17865196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 514
Target Start/End: Complemental strand, 21498872 - 21498766
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || | ||    ||| |||||| ||| || |||||    
T  21498872 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaat----tgtcaggccaactcctaaccgat 21498777  T
Q  504 gtgggactctt 514  Q
    |||||||||||    
T  21498776 gtgggactctt 21498766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 514
Target Start/End: Original strand, 28245533 - 28245639
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    ||||| |||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| |||||||| | ||||||||    
T  28245533 atcgtagttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatcacctatccgat 28245628  T
Q  504 gtgggactctt 514  Q
    ||| |||||||    
T  28245629 gtgagactctt 28245639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 37815500 - 37815561
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||| ||| | ||||||| |||||||||||||||    
T  37815500 ccctataatattcattttagtcctcattttgaaggactaaaatcaaatattctacatattac 37815561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 39385385 - 39385324
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||| ||| | ||||||| |||||||||||||||    
T  39385385 ccctataatattcattttagtcctcattttgaaggactaaaatcaaatattctacatattac 39385324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 43750106 - 43750167
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||||| | |||| || |||||||||||||||    
T  43750106 ccctataatattcattttagtcctcattttgagggactaaaataaaatattctacatattac 43750167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 514
Target Start/End: Original strand, 50543574 - 50543680
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||| | ||||||||||  || |||| ||||||||||| ||||||||||||  ||||||  | ||||    ||| |||||||| | ||||||||    
T  50543574 atcgtggttgggcctaacacaactccacaaaaccggcttgtgaggtgaggattgcccccacttatacacacat----tgtcaggccatcacctatccgat 50543669  T
Q  504 gtgggactctt 514  Q
    |||||||||||    
T  50543670 gtgggactctt 50543680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 1518241 - 1518185
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||  | ||||||||||| || |||| ||||||||||||||||||||||||    
T  1518241 atcgtggttaggcctaacacaaccccacaaaaccggcttgtgagctgaggattgccc 1518185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 460
Target Start/End: Original strand, 22231315 - 22231371
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  22231315 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 22231371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 421 - 519
Target Start/End: Original strand, 27464272 - 27464366
Alignment:
Q  421 cacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactctttaaca 519  Q
    ||||||| || |||| ||||||||||| |||||||||||   ||||||  ||||| |||  || |||  ||||||||||||||||||||||||||||||    
T  27464272 cacaaccccacaaaaccggcttgtgaggtgaggattgcctccacttat--aaacacttt--gtcaggaaatctcttatccgatgtgggactctttaaca 27464366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 460
Target Start/End: Original strand, 53559297 - 53559353
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||| | ||||||||||| || ||||||||||||| || ||||||||||||    
T  53559297 atcgtggttgggcctaacacaaccccacaaaatcggcttgtaaggtgaggattgccc 53559353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 319
Target Start/End: Complemental strand, 12792794 - 12792735
Alignment:
Q  260 ctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||| ||||    
T  12792794 ctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatgttac 12792735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 319
Target Start/End: Original strand, 20045963 - 20046022
Alignment:
Q  260 ctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||| ||||||||||| || ||||||| ||| | ||||||| |||||||||||||||    
T  20045963 ctataatattcattttagtcctcattttgaaggactaaaatcaaatattctacatattac 20046022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 477
Target Start/End: Original strand, 35796763 - 35796822
Alignment:
Q  418 taacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 477  Q
    ||||||||||||| |||| ||||||||||| ||||||||||||  |||||| || |||||    
T  35796763 taacacaacctcacaaaaccggcttgtgaggtgaggattgcccccacttataaacacatt 35796822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 407 - 477
Target Start/End: Original strand, 400575 - 400645
Alignment:
Q  407 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 477  Q
    |||||||||  ||||||||||||| |||| ||||||||||| |||||||| |||  |||||| || |||||    
T  400575 gtggttgagcttaacacaacctcacaaaaccggcttgtgaggtgaggatttcccccacttataaacacatt 400645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 460
Target Start/End: Original strand, 5398221 - 5398275
Alignment:
Q  406 cgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  5398221 cgtggttgggcctaacacaaccccacaaaaccggcttgtgagatgaggattgccc 5398275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 477
Target Start/End: Complemental strand, 22863560 - 22863478
Alignment:
Q  395 ctctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 477  Q
    |||| ||| |||||||||| | ||||||||||| || |||| ||||||||| | ||||||||||||  |||||| || |||||    
T  22863560 ctcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtggggtgaggattgcccccacttataaacacatt 22863478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 315
Target Start/End: Complemental strand, 26314696 - 26314642
Alignment:
Q  261 tataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 315  Q
    |||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  26314696 tataatattcattttagttctcattttgagggactaaaatcaaatattctacata 26314642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 481 - 519
Target Start/End: Original strand, 28208414 - 28208452
Alignment:
Q  481 tgttaggccatctcttatccgatgtgggactctttaaca 519  Q
    |||||| ||||||||||||| ||||||||||||||||||    
T  28208414 tgttagaccatctcttatccaatgtgggactctttaaca 28208452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 32592964 - 32592906
Alignment:
Q  261 tataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    |||||| ||||||||||| || ||||||||||| | ||||||| ||||||| |||||||    
T  32592964 tataatattcattttagtcctcattttgagggactaaaatcaaatattctatatattac 32592906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 457
Target Start/End: Complemental strand, 9685475 - 9685422
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattg 457  Q
    |||||||||| | |||||||||||||| |||| || |||||||| |||||||||    
T  9685475 atcgtggttgggcctaacacaacctcacaaaaccgacttgtgaggtgaggattg 9685422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 514
Target Start/End: Complemental strand, 21498431 - 21498325
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||| | |||||| |||| || |||| ||||||||||| ||||||||||||  |||||| || | ||    ||| |||||| ||| || |||||    
T  21498431 atcgtggttgggcctaacataaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaat----tgtcaggccaactcctaaccgat 21498336  T
Q  504 gtgggactctt 514  Q
    |||||||||||    
T  21498335 gtgggactctt 21498325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 514
Target Start/End: Original strand, 27634116 - 27634194
Alignment:
Q  432 aaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactctt 514  Q
    |||||||| ||||||| ||||||||||||  |||||| || ||||    ||| ||||||| || |||||||||||||||||||    
T  27634116 aaaatcggtttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctatccgatgtgggactctt 27634194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 460
Target Start/End: Original strand, 53828533 - 53828586
Alignment:
Q  407 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    ||||||| | ||||||||||| || ||||||||||| |||| ||||||||||||    
T  53828533 gtggttgggcctaacacaaccccacaaaatcggcttatgaggtgaggattgccc 53828586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 5846223 - 5846167
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||||| ||||| ||||| || |||| |||||| |||| ||||||||||||    
T  5846223 atcgtggttgagcctaacgcaaccccacaaaaccggcttatgaggtgaggattgccc 5846167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 417 - 477
Target Start/End: Original strand, 11036766 - 11036826
Alignment:
Q  417 ctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 477  Q
    ||||||||||| || | |||||||||||||| ||||||||||||  |||||| || |||||    
T  11036766 ctaacacaaccccacacaatcggcttgtgaggtgaggattgcccccacttataaacacatt 11036826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 460
Target Start/End: Original strand, 14783194 - 14783250
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||| ||||||||    
T  14783194 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattgccc 14783250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 408 - 452
Target Start/End: Original strand, 30529937 - 30529981
Alignment:
Q  408 tggttgagtctaacacaacctcataaaatcggcttgtgagctgag 452  Q
    |||||||| ||||||||| ||||||||| ||||||||||| ||||    
T  30529937 tggttgagcctaacacaatctcataaaaccggcttgtgaggtgag 30529981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 460
Target Start/End: Original strand, 35819135 - 35819191
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||| | |||||||||||||| ||||  ||||||||||  |||||||||||    
T  35819135 atcgtggttgggcctaacacaacctcacaaaactggcttgtgaggcgaggattgccc 35819191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 417 - 514
Target Start/End: Complemental strand, 37836144 - 37836051
Alignment:
Q  417 ctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactctt 514  Q
    ||||||||||| || |||| |||||||| ||  |||||||||||  |||||| || |||||    |||||||||| || | |||||||||||||||||    
T  37836144 ctaacacaaccccacaaaaccggcttgtaaggagaggattgcccccacttataaatacatt----gttaggccatgtcctgtccgatgtgggactctt 37836051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 460
Target Start/End: Original strand, 50543337 - 50543393
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||| | ||||||||||| || |||| ||||||||| | ||||||||||||    
T  50543337 atcgtggttgggcctaacacaaccccacaaaaccggcttgtggggtgaggattgccc 50543393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 17457942 - 17457881
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| |||||||||||||| | ||||||| |||||||||||||||    
T  17457942 ccctataatattcattttagtccttattttgagggactaaaatcaaatattctacatattac 17457881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 18369237 - 18369176
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| |||||||||||||| | ||||||| |||||||||||||||    
T  18369237 ccctataatattcattttagtccttattttgagggactaaaatcaaatattctacatattac 18369176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 394 - 514
Target Start/End: Complemental strand, 16419589 - 16419473
Alignment:
Q  394 actctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatct 493  Q
    ||||| ||| |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| || |||| |    
T  16419589 actcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcagaccatgt 16419494  T
Q  494 cttatccgatgtgggactctt 514  Q
    | |||||||||||||||||||    
T  16419493 cctatccgatgtgggactctt 16419473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 394 - 514
Target Start/End: Original strand, 40379206 - 40379322
Alignment:
Q  394 actctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatct 493  Q
    ||||| ||| |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || |||     ||| ||||||||     
T  40379206 actcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaca----ctgtcaggccatca 40379301  T
Q  494 cttatccgatgtgggactctt 514  Q
    | |||||||||||||||||||    
T  40379302 cctatccgatgtgggactctt 40379322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 3371461 - 3371522
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  3371461 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 3371522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 12806708 - 12806769
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  12806708 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 12806769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 514
Target Start/End: Original strand, 40379451 - 40379557
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || |||     ||| |||||||| | ||||||||    
T  40379451 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaca----ctgtcaggccatcacctatccgat 40379546  T
Q  504 gtgggactctt 514  Q
    |||||||||||    
T  40379547 gtgggactctt 40379557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 41594175 - 41594114
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  41594175 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 41594114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 42705111 - 42705172
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  42705111 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 42705172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 2324551 - 2324495
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||||| ||||||||||| || |||| ||||||||||| ||||||||||||    
T  2324551 atcgtggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 2324495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 247 - 319
Target Start/End: Complemental strand, 7877559 - 7877487
Alignment:
Q  247 ttgaaatttaaccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    |||||||| ||||||||||| || |||||||| || ||||||||||| | ||||||| ||||| |||||||||    
T  7877559 ttgaaattgaaccctataatatttattttagtcctcattttgagggactaaaatcaaatattcaacatattac 7877487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 468
Target Start/End: Original strand, 17854936 - 17855000
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 468  Q
    |||||||||| ||||| ||||||| || |||| ||||||||||| ||||||||||||| ||||||    
T  17854936 atcgtggttgggtctagcacaaccccacaaaaccggcttgtgaggtgaggattgccctcacttat 17855000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 407 - 455
Target Start/End: Original strand, 27897513 - 27897561
Alignment:
Q  407 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggat 455  Q
    ||||||||| ||||||||||||||||||| ||||||||||| |||||||    
T  27897513 gtggttgagcctaacacaacctcataaaaccggcttgtgaggtgaggat 27897561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 37609179 - 37609119
Alignment:
Q  259 cctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    |||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  37609179 cctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 37609119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 319
Target Start/End: Original strand, 13572633 - 13572691
Alignment:
Q  261 tataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    |||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  13572633 tataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 13572691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 30432816 - 30432758
Alignment:
Q  261 tataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    |||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  30432816 tataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 30432758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 4171684 - 4171745
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || |||||||| || | ||||||| |||||||||||||||    
T  4171684 ccctataatattcattttagtcctcattttgagagactaaaatcaaatattctacatattac 4171745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 514
Target Start/End: Original strand, 5711446 - 5711552
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||| | ||||||||||| || |||| |||||||| || ||||||||||||  |||||| || ||||    ||| ||||||| || | ||||||    
T  5711446 atcgtggttgggcctaacacaaccccacaaaaccggcttgttaggtgaggattgcccccacttataaacacat----tgtcaggccatttcctttccgat 5711541  T
Q  504 gtgggactctt 514  Q
    |||||||||||    
T  5711542 gtgggactctt 5711552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 14379337 - 14379276
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| ||  |||||||||| | ||||||| |||||||||||||||    
T  14379337 ccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattac 14379276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 19204751 - 19204812
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| |||||| |||| || ||||||||||| | ||||||| |||||||||||||||    
T  19204751 ccctataatattcattctagtcctcattttgagggactaaaatcaaatattctacatattac 19204812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 29683333 - 29683394
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||| ||||||||||    
T  29683333 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattttacatattac 29683394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 432 - 514
Target Start/End: Original strand, 33606089 - 33606167
Alignment:
Q  432 aaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactctt 514  Q
    |||| ||| ||||||| |||||||||||| ||||||| || |||||||     |||||||||| |||||||||||||||||||    
T  33606089 aaaaccggtttgtgaggtgaggattgcccctacttataaacacattttc----aggccatctcctatccgatgtgggactctt 33606167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 315
Target Start/End: Complemental strand, 33940901 - 33940844
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 315  Q
    ||||||||| |||||||||||  ||||||||||||| | ||||||| |||||||||||    
T  33940901 ccctataatattcattttagtctttattttgagggactaaaatcaaatattctacata 33940844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 2324317 - 2324261
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  2324317 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 2324261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 247 - 319
Target Start/End: Original strand, 2395305 - 2395377
Alignment:
Q  247 ttgaaatttaaccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    |||||||| | | ||||||| ||||||||||  || ||||||||||| | ||||||| |||||||||||||||    
T  2395305 ttgaaattgatctctataatattcattttagccctcattttgagggactaaaatcaaatattctacatattac 2395377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 318
Target Start/End: Complemental strand, 6880193 - 6880137
Alignment:
Q  262 ataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatatta 318  Q
    ||||| ||||||||||| || ||||||||||| | ||||||| ||||||||||||||    
T  6880193 ataatattcattttagtcctcattttgagggattaaaatcaaatattctacatatta 6880137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 460
Target Start/End: Original strand, 15124555 - 15124611
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||| ||||||||||||| || ||||||||||| |||| || |||||||||    
T  15124555 atcgtggttgggtctaacacaaccccacaaaatcggcttatgaggtggggattgccc 15124611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 468
Target Start/End: Complemental strand, 29718405 - 29718341
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 468  Q
    |||||||||  | ||||||||||| || |||| ||||||||||| ||||||||||||| ||||||    
T  29718405 atcgtggttaggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccctcacttat 29718341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 488 - 519
Target Start/End: Complemental strand, 10523250 - 10523219
Alignment:
Q  488 ccatctcttatccgatgtgggactctttaaca 519  Q
    ||||||||||||||||||||||||||||||||    
T  10523250 ccatctcttatccgatgtgggactctttaaca 10523219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 516
Target Start/End: Complemental strand, 14927179 - 14927071
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||||| ||||||||||| || |||   | ||| |||| ||||||||||||  |||||| || |||||    || ||| |||||||||||||||    
T  14927179 atcgtggttgagcctaacacaaccacacaaagctgacttatgaggtgaggattgcccccacttataaacacatt----gtcaggtcatctcttatccgat 14927084  T
Q  504 gtgggactcttta 516  Q
    ||| |||||||||    
T  14927083 gtgtgactcttta 14927071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 6164119 - 6164061
Alignment:
Q  261 tataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    |||||| ||||||||||| ||  |||||||||| | ||||||| |||||||||||||||    
T  6164119 tataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattac 6164061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 415 - 477
Target Start/End: Complemental strand, 16533613 - 16533551
Alignment:
Q  415 gtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 477  Q
    |||||||||||||||| |||| ||||||||||  ||||||||||||  |||||| || |||||    
T  16533613 gtctaacacaacctcacaaaaccggcttgtgaagtgaggattgcccccacttataaacacatt 16533551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 419 - 514
Target Start/End: Complemental strand, 17719462 - 17719371
Alignment:
Q  419 aacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactctt 514  Q
    |||||||||  | |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| |||||||| | |||||||||||||||||||    
T  17719462 aacacaacccgacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatcacctatccgatgtgggactctt 17719371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 319
Target Start/End: Original strand, 28921355 - 28921413
Alignment:
Q  261 tataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    |||||| ||||||||||| ||  |||||||||| | ||||||| |||||||||||||||    
T  28921355 tataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattac 28921413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 457
Target Start/End: Original strand, 19191617 - 19191670
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattg 457  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| |||||||||    
T  19191617 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattg 19191670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 514
Target Start/End: Original strand, 28407800 - 28407906
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||| | ||||||||||  || |||| ||||||||||| ||||||||||||  |||||| || | ||    ||||||||||  || || |||||    
T  28407800 atcgtggttgggcctaacacaactccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaat----tgttaggccaattcctaaccgat 28407895  T
Q  504 gtgggactctt 514  Q
    |||||||||||    
T  28407896 gtgggactctt 28407906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 514
Target Start/End: Complemental strand, 32884184 - 32884078
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    ||||| |||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || | ||    ||| |||||| ||| || |||||    
T  32884184 atcgtagttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaat----tgtcaggccaactcctaaccgat 32884089  T
Q  504 gtgggactctt 514  Q
    |||||||||||    
T  32884088 gtgggactctt 32884078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 514
Target Start/End: Original strand, 37812533 - 37812611
Alignment:
Q  432 aaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactctt 514  Q
    ||||||| |||||||| ||||||||||||  |||||| || ||||    ||| ||| ||| ||||||||||||||||||||||    
T  37812533 aaaatcgacttgtgaggtgaggattgcccccacttataaacacat----tgtcaggtcatgtcttatccgatgtgggactctt 37812611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 460
Target Start/End: Original strand, 37769950 - 37770006
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||| ||||||||||||| || |||| |||||| |||| ||| ||||||||    
T  37769950 atcgtggttgggtctaacacaaccccacaaaaccggcttatgaggtgaagattgccc 37770006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 417 - 457
Target Start/End: Original strand, 40149023 - 40149063
Alignment:
Q  417 ctaacacaacctcataaaatcggcttgtgagctgaggattg 457  Q
    ||||||||||| || |||||||||||||||| |||||||||    
T  40149023 ctaacacaaccccacaaaatcggcttgtgaggtgaggattg 40149063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 4611 - 4550
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  4611 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 4550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 43501 - 43440
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  43501 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 43440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 212635 - 212575
Alignment:
Q  259 cctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    |||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  212635 cctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 212575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 514
Target Start/End: Original strand, 5761 - 5867
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 503  Q
    |||||||||| | ||||||||||| |  |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| || | || |||||||||||    
T  5761 atcgtggttgggcctaacacaaccccgcaaaaccggcttgtgagatgaggattgcccccacttataaacacat----tgtcagactatgtcttatccgat 5856  T
Q  504 gtgggactctt 514  Q
    |||||||||||    
T  5857 gtgggactctt 5867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 36989 - 36928
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| ||||||||||| ||  |||||||||| | ||||||| |||||||||||||||    
T  36989 ccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattac 36928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 460
Target Start/End: Original strand, 4440 - 4492
Alignment:
Q  408 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||| ||||||||||| || |||| ||||||||||| ||||||||||||    
T  4440 tggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 4492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 407 - 514
Target Start/End: Complemental strand, 2225 - 2122
Alignment:
Q  407 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 506  Q
    ||||||| | ||||||||||| || |||| |||||||| || ||||||||||||  |||||| || ||||    ||| ||||||| || | |||||||||    
T  2225 gtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctgtccgatgtg 2130  T
Q  507 ggactctt 514  Q
    ||||||||    
T  2129 ggactctt 2122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 36215 - 36157
Alignment:
Q  261 tataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    |||||| ||||||||||| ||  |||||||||| | ||||||| |||||||||||||||    
T  36215 tataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattac 36157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 8766 - 8705
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||| ||| ||||||||| | || ||||||||||| | ||||||| |||||||||||||||    
T  8766 ccctaaaatattcattttaatcctcattttgagggactaaaatcaaatattctacatattac 8705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 477
Target Start/End: Complemental strand, 5732 - 5659
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 477  Q
    |||||||||| ||||||||||||| || |||| |||||||| || |||||||| |||  |||||| || |||||    
T  5732 atcgtggttgggtctaacacaaccccacaaaaccggcttgtaagatgaggattacccccacttataaacacatt 5659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 460
Target Start/End: Complemental strand, 12721 - 12668
Alignment:
Q  407 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    ||||||| | ||||||||||| || ||||||| |||||||| ||||||||||||    
T  12721 gtggttgggcctaacacaaccacacaaaatcgacttgtgaggtgaggattgccc 12668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 118187 - 118247
Alignment:
Q  258 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 319  Q
    ||||||||| || |||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  118187 ccctataatatttattttagtcctcattttgagggact-aaatcaaatattctacatattac 118247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 56536 - 56480
Alignment:
Q  404 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 460  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||| ||||||||    
T  56536 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattgccc 56480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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