View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4512_low_43 (Length: 245)
Name: NF4512_low_43
Description: NF4512
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4512_low_43 |
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Alignment Details
Target: chr7 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 36424545 - 36424314
Alignment:
| Q |
1 |
ccaaatgaatatggtttacaatgggatcaggaggttcagatagtaaatatctactaggctccgtaatggcattcctagcgaggtaatgggcgaccgaata |
100 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |
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| T |
36424545 |
ccaaatgaatttggtttacaatgggatcaggaggttcagatagtaaatatctactaggctccgaaatggcattcctagcaaggtaatgggcgaccgaata |
36424446 |
T |
|
| Q |
101 |
acctcttcttcctacaagaagaaatttgcttttcacacatctatgatttgctctctggcatcctaaactgacgaaaattctccggcgggggttaacttat |
200 |
Q |
| |
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|||||||| |||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||| ||| ||||| ||||||||||| |
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| T |
36424445 |
acctcttcatcctacaagaagaaatttgcctttcacacatctatgattttctctttggcatcctaaactgacgaaaatactctggcggcggttaacttat |
36424346 |
T |
|
| Q |
201 |
gtttggagaacctttaagtcggttaagtgtct |
232 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
36424345 |
gtttggagaacctttaagtcggttaagtgtct |
36424314 |
T |
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