View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4512_low_49 (Length: 238)
Name: NF4512_low_49
Description: NF4512
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4512_low_49 |
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Alignment Details
Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 2883576 - 2883779
Alignment:
| Q |
1 |
taattaagtggtatttaaattatgaactacttcttcatacataattgaagttatatcctctcatgttaaactactcttcatacataatttaagttatgaa |
100 |
Q |
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| T |
2883576 |
taattaagtggtatttaagttatgaactacttcttcatacataattgaagttatatcctctcatgttaaactattcttcatacataatttaagttatgaa |
2883675 |
T |
|
| Q |
101 |
ctattcttcacacatagttaagtgctatttaatttatgaacgattcttcttaattaagcggtcttactaagaggtaacttaagtgacctttcacatacac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |
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| T |
2883676 |
ctattcttcacacatagttaagtgctatttaatttatgaacgattcttcttaattaagcggtcttactaaaaggtaacttaagtgacctttcacttacac |
2883775 |
T |
|
| Q |
201 |
atca |
204 |
Q |
| |
|
|||| |
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| T |
2883776 |
atca |
2883779 |
T |
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