View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4513_high_3 (Length: 647)

Name: NF4513_high_3
Description: NF4513
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4513_high_3
NF4513_high_3
[»] chr4 (22 HSPs)
chr4 (357-642)||(8176161-8176446)
chr4 (358-642)||(10218922-10219206)
chr4 (357-632)||(40899633-40899918)
chr4 (357-630)||(48996330-48996613)
chr4 (357-642)||(30193529-30193824)
chr4 (436-642)||(6333555-6333761)
chr4 (357-642)||(31301638-31301923)
chr4 (357-642)||(32136931-32137229)
chr4 (436-642)||(40806458-40806661)
chr4 (436-642)||(23937160-23937366)
chr4 (386-642)||(52344947-52345212)
chr4 (436-642)||(43630790-43630978)
chr4 (404-518)||(52345214-52345328)
chr4 (357-448)||(26477742-26477833)
chr4 (508-612)||(29639724-29639828)
chr4 (357-448)||(29640014-29640105)
chr4 (357-448)||(50570571-50570662)
chr4 (357-448)||(29643320-29643411)
chr4 (357-448)||(42558102-42558193)
chr4 (357-447)||(5261404-5261494)
chr4 (357-448)||(36078703-36078794)
chr4 (150-191)||(23675743-23675784)
[»] chr7 (30 HSPs)
chr7 (357-642)||(22366689-22366974)
chr7 (357-631)||(32823846-32824120)
chr7 (357-628)||(10069816-10070087)
chr7 (359-627)||(31876197-31876470)
chr7 (357-591)||(42910230-42910469)
chr7 (357-630)||(36921105-36921385)
chr7 (358-631)||(31982221-31982480)
chr7 (357-632)||(43429417-43429702)
chr7 (358-642)||(13852547-13852839)
chr7 (436-642)||(24360931-24361137)
chr7 (452-631)||(48675362-48675541)
chr7 (357-553)||(27054276-27054483)
chr7 (357-642)||(47903473-47903753)
chr7 (365-544)||(18672777-18672966)
chr7 (357-561)||(5932944-5933152)
chr7 (357-503)||(36509024-36509166)
chr7 (357-458)||(11205991-11206092)
chr7 (357-448)||(3211755-3211846)
chr7 (357-448)||(47070047-47070138)
chr7 (359-448)||(12117979-12118068)
chr7 (357-448)||(8768279-8768370)
chr7 (357-448)||(10672198-10672289)
chr7 (547-642)||(36508929-36509024)
chr7 (579-642)||(18672975-18673038)
chr7 (400-448)||(47204113-47204161)
chr7 (357-407)||(1335884-1335934)
chr7 (579-642)||(5932883-5932946)
chr7 (595-632)||(27054549-27054586)
chr7 (357-393)||(24360844-24360880)
chr7 (357-389)||(45898104-45898136)
[»] chr3 (20 HSPs)
chr3 (359-632)||(6003944-6004227)
chr3 (376-642)||(50562159-50562425)
chr3 (358-632)||(35531712-35531991)
chr3 (358-642)||(21586402-21586690)
chr3 (376-630)||(32880547-32880816)
chr3 (500-642)||(27641870-27642012)
chr3 (18-181)||(27641464-27641625)
chr3 (440-642)||(33002756-33002958)
chr3 (424-632)||(39098187-39098390)
chr3 (482-642)||(43030666-43030825)
chr3 (357-493)||(48032690-48032836)
chr3 (357-448)||(10369630-10369721)
chr3 (214-290)||(27641628-27641704)
chr3 (357-448)||(4669206-4669297)
chr3 (357-460)||(27641771-27641879)
chr3 (357-448)||(35401783-35401874)
chr3 (357-448)||(51149281-51149372)
chr3 (357-444)||(33361336-33361423)
chr3 (376-448)||(34794943-34795015)
chr3 (375-448)||(43030855-43030923)
[»] chr2 (15 HSPs)
chr2 (357-642)||(11376125-11376415)
chr2 (357-642)||(44979324-44979619)
chr2 (357-638)||(25297805-25298096)
chr2 (357-642)||(19936674-19936964)
chr2 (359-642)||(34910547-34910841)
chr2 (376-642)||(44035548-44035824)
chr2 (357-642)||(17916413-17916704)
chr2 (357-560)||(18360121-18360334)
chr2 (508-642)||(20420438-20420572)
chr2 (357-448)||(9811759-9811850)
chr2 (357-448)||(16579009-16579100)
chr2 (357-448)||(20420797-20420888)
chr2 (357-448)||(36412910-36413001)
chr2 (579-642)||(18357509-18357572)
chr2 (376-448)||(42785098-42785170)
[»] chr1 (19 HSPs)
chr1 (357-642)||(51251979-51252264)
chr1 (357-642)||(33910325-33910620)
chr1 (360-642)||(39256187-39256479)
chr1 (358-642)||(16529041-16529335)
chr1 (357-632)||(44918790-44919060)
chr1 (358-642)||(45692035-45692324)
chr1 (357-642)||(24910602-24910897)
chr1 (376-642)||(32954318-32954589)
chr1 (376-642)||(33474680-33474956)
chr1 (482-642)||(1160701-1160861)
chr1 (500-632)||(29389281-29389413)
chr1 (366-553)||(11899367-11899564)
chr1 (370-511)||(6722384-6722529)
chr1 (376-474)||(29390096-29390194)
chr1 (376-448)||(8211659-8211731)
chr1 (358-439)||(1160583-1160663)
chr1 (376-448)||(5154965-5155037)
chr1 (357-448)||(29707695-29707781)
chr1 (376-448)||(20494114-20494186)
[»] chr6 (11 HSPs)
chr6 (357-642)||(35039487-35039782)
chr6 (386-630)||(33550574-33550828)
chr6 (359-642)||(25137383-25137675)
chr6 (436-642)||(13801615-13801821)
chr6 (436-642)||(15859967-15860172)
chr6 (376-631)||(10591099-10591353)
chr6 (357-630)||(10390589-10390858)
chr6 (357-448)||(12270925-12271016)
chr6 (357-448)||(5866631-5866722)
chr6 (357-448)||(10493940-10494031)
chr6 (357-390)||(13801531-13801564)
[»] chr5 (33 HSPs)
chr5 (357-631)||(2226432-2226716)
chr5 (357-642)||(12680624-12680919)
chr5 (357-642)||(32520774-32521064)
chr5 (359-642)||(36103162-36103455)
chr5 (360-642)||(9161221-9161511)
chr5 (357-642)||(38433924-38434219)
chr5 (357-628)||(12165492-12165773)
chr5 (376-642)||(332849-333127)
chr5 (357-632)||(30265347-30265626)
chr5 (358-642)||(17084436-17084719)
chr5 (462-628)||(35893238-35893405)
chr5 (357-525)||(36176438-36176616)
chr5 (357-561)||(10174382-10174588)
chr5 (485-642)||(23780972-23781124)
chr5 (485-642)||(23867925-23868077)
chr5 (357-632)||(36176669-36176934)
chr5 (450-632)||(42544902-42545086)
chr5 (508-642)||(38334674-38334808)
chr5 (495-631)||(9988586-9988722)
chr5 (358-457)||(42545815-42545914)
chr5 (357-449)||(38334364-38334456)
chr5 (357-448)||(666881-666972)
chr5 (357-448)||(11917824-11917915)
chr5 (357-448)||(15068845-15068936)
chr5 (357-448)||(27885696-27885787)
chr5 (357-448)||(30002367-30002458)
chr5 (357-448)||(701586-701677)
chr5 (357-448)||(8409355-8409446)
chr5 (357-459)||(35359454-35359551)
chr5 (357-420)||(23781175-23781238)
chr5 (357-420)||(23868128-23868191)
chr5 (595-642)||(35893200-35893247)
chr5 (357-412)||(35893493-35893548)
[»] chr8 (15 HSPs)
chr8 (357-630)||(14549478-14549757)
chr8 (357-642)||(18169581-18169870)
chr8 (357-642)||(18633147-18633436)
chr8 (357-642)||(30392319-30392613)
chr8 (357-642)||(36827341-36827636)
chr8 (357-631)||(3682169-3682447)
chr8 (358-631)||(36909898-36910165)
chr8 (436-642)||(10661387-10661593)
chr8 (357-629)||(33068844-33069121)
chr8 (360-496)||(44673109-44673255)
chr8 (362-539)||(6200490-6200677)
chr8 (357-448)||(5802505-5802596)
chr8 (357-448)||(3006186-3006272)
chr8 (578-642)||(44673010-44673074)
chr8 (380-443)||(10661596-10661658)
[»] scaffold0059 (2 HSPs)
scaffold0059 (362-642)||(69089-69379)
scaffold0059 (362-556)||(77195-77399)
[»] scaffold0013 (2 HSPs)
scaffold0013 (357-642)||(106273-106569)
scaffold0013 (436-642)||(128880-129087)
[»] scaffold0029 (2 HSPs)
scaffold0029 (357-642)||(40123-40418)
scaffold0029 (357-608)||(47319-47580)
[»] scaffold0308 (1 HSPs)
scaffold0308 (357-448)||(5466-5557)


Alignment Details
Target: chr4 (Bit Score: 194; Significance: 1e-105; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 357 - 642
Target Start/End: Original strand, 8176161 - 8176446
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaactgcaagaa 456  Q
    ||||||||||||||||||| ||| |||| ||||||||| ||| |||  |||||||| | ||||||| ||||||||||||||||||||||||| |||||||    
T  8176161 cgcacttggttcggatgaactcgaatgacttttgcactgaaccgcgtcgttcggttcgatttgcggtttgcatctcagcaaccaaaccaaaccgcaagaa 8176260  T
Q  457 taatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcgattct 556  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  8176261 taatgaagattacttaaacatgtactagcccaattacatagcccaaaaataatctcttttgattcgatttttccattgttgcaccatcaggttcgatcct 8176360  T
Q  557 aattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    ||||||| |||| |||||||| |||||||||||| |||||||| |||| ||||||||||||||||||||||||||| |||| ||||    
T  8176361 aattcctttccatctcttttaattcattttcagttatgaatttttttctttttcttcccaataatttgtttcatgcttatgtttct 8176446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 358 - 642
Target Start/End: Complemental strand, 10219206 - 10218922
Alignment:
Q  358 gcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaactgcaagaat 457  Q
    |||||||||||| ||||| |||||||| |||| |||| ||| ||||||||||||||||||||||| ||||||||||   |||||||||||| ||||||||    
T  10219206 gcacttggttcgaatgaactcggatgacttttacactgaaccgcgcggttcggtttggtttgcggtttgcatctcaagtaccaaaccaaaccgcaagaat 10219107  T
Q  458 aatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcgattcta 557  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||    
T  10219106 aatgaatattacttaaacatgtactagcccaattacatagctcaagaataatctcatttgattagatttttccattgttgcaccatctggttcgattcta 10219007  T
Q  558 attcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    |||||| |||| |||||| | ||||||||||||||||||||| |||| ||| |||| |||||||||||||||||| |||| ||||    
T  10219006 attcctttccatctctttcaattcattttcagtgatgaatttgtttcttttacttctcaataatttgtttcatgcttatgtttct 10218922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 357 - 632
Target Start/End: Original strand, 40899633 - 40899918
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaacc----------aaaccaa 446  Q
    |||||||||||||||||||||||||||| |||||| || ||| |||||||| |||| ||||||||| ||||||||||||||||          |||||||    
T  40899633 cgcacttggttcggatgaattcggatgacttttgcgctgaaccgcgcggtttggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaa 40899732  T
Q  447 actgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcag 546  Q
    || ||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||     
T  40899733 accgcaagaataatgaatgttacttaaacatgtaatagcccaattacatagcccaaggataatctcttttgattcgatttttccattgttgcaccatcaa 40899832  T
Q  547 gttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgc 632  Q
     ||| |||||||||||| |||| |||||| | ||||||| |||||||||||||||||||||| ||| ||||||||||| |||||||    
T  40899833 attcaattctaattcctttccatctctttaaattcatttccagtgatgaatttatttcctttacttaccaataatttgattcatgc 40899918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 357 - 630
Target Start/End: Complemental strand, 48996613 - 48996330
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaacc----------aaaccaa 446  Q
    |||||||||||||||| ||||||||||| ||||||| | ||| ||||||||||||||| ||||||| ||||||||||||||||          |||||||    
T  48996613 cgcacttggttcggatcaattcggatgacttttgcaatgaaccgcgcggttcggtttgatttgcggtttgcatctcagcaaccgaaccaaaccaaaccaa 48996514  T
Q  447 actgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcag 546  Q
    || ||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||     
T  48996513 accgcaagaataatgaatattacttaaacatgtactagcctaattacatagcctaagaataatctcttttgattcgattttttcattgttgcaccatcaa 48996414  T
Q  547 gttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcat 630  Q
     |||||||||||||||| ||||||||||| | || |||||||||||| ||||| |||| |||||||| ||||||||||||||||    
T  48996413 attcgattctaattcctttccacctctttcaatttattttcagtgataaatttgtttcattttcttctcaataatttgtttcat 48996330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 357 - 642
Target Start/End: Original strand, 30193529 - 30193824
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaact------- 449  Q
    ||||| || |||||||||||||| |||| ||||||| | ||| | |||||||||||  |||||| | |||||||||||||||| ||||||||            
T  30193529 cgcacatgattcggatgaattcgtatgacttttgcaatgaaccgtgcggttcggttcagtttgcagtttgcatctcagcaaccgaaccaaaccaaaccat 30193628  T
Q  450 ---gcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcag 546  Q
       ||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  30193629 accgcaagaataatgaatattacttaaatatgtattatcccaattacatagctcaagaataatttcttttgattcgatttttccattgttgcaccatcag 30193728  T
Q  547 gttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    |||||||| |||||||| |||| |||||| | ||||||| ||||||||||||| |||||||| ||||||||||||||||||||||| |||| ||||    
T  30193729 gttcgattttaattcctttccatctctttcaattcatttacagtgatgaatttgtttcctttacttcccaataatttgtttcatgcttatgtttct 30193824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 436 - 642
Target Start/End: Complemental strand, 6333761 - 6333555
Alignment:
Q  436 aaccaaaccaaactgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgt 535  Q
    |||||||| |||| ||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||| ||    
T  6333761 aaccaaactaaaccgcaagaataatgaatattacttaaatatgtactagcccaattacatagctcaagaataatctcttttgattcaatttttccatcgt 6333662  T
Q  536 tgcaccatcaggttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgccta 635  Q
    |||||||||||||||||||||||||| | |||| |||||| | ||||||| ||||||||||||| |||||||| ||||||||||||||||||||||| ||    
T  6333661 tgcaccatcaggttcgattctaattcatttccatctctttcaattcatttccagtgatgaatttgtttcctttacttcccaataatttgtttcatgctta 6333562  T
Q  636 tgcttct 642  Q
    || ||||    
T  6333561 tgtttct 6333555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 357 - 642
Target Start/End: Complemental strand, 31301923 - 31301638
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaactgcaagaa 456  Q
    |||||||||||||||||||||| ||||| |||| |||| |||  |  ||||| ||| ||||||||| |||||||||||||||| |||||||| |||||||    
T  31301923 cgcacttggttcggatgaattcagatgactttt-cactgaaccacatggttcagttcggtttgcggtttgcatctcagcaaccgaaccaaaccgcaagaa 31301825  T
Q  457 taatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttg-attcgatttttccattgttgcaccatcaggttcgattc 555  Q
    |||| |||||||||||||| |||||||||||||||||||| | |||||||||| | ||||  |||||| |||| ||||||||||||||||| ||||||||    
T  31301824 taatcaatattacttaaacttgtattagcccaattacataactcaagaataattttttttttattcgactttttcattgttgcaccatcagtttcgattc 31301725  T
Q  556 taattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    |||||| | |||| ||| || | ||||||| ||||||||||||| |||||||||||| ||||||||||||||||||| |||| ||||    
T  31301724 taattcatttccatctccttcaattcatttccagtgatgaatttgtttccttttctttccaataatttgtttcatgcttatgtttct 31301638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 357 - 642
Target Start/End: Complemental strand, 32137229 - 32136931
Alignment:
Q  357 cgcacttggttcggatgaatt---cggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaacc----------aaac 443  Q
    |||||||| ||||||||||||   | ||||| ||||||| | ||| | ||||||||||||||||||||| ||||||||||||||||          ||||    
T  32137229 cgcacttgattcggatgaatttttcagatgacttttgcaatgaaccgtgcggttcggtttggtttgcggtttgcatctcagcaaccgaaccaaatcaaac 32137130  T
Q  444 caaactgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccat 543  Q
    |||||  ||||||| |||||||||||||||||||||| |||||||||||||||||  ||||||||| |||||| ||||||||||| ||||||||||||||    
T  32137129 caaaccacaagaatgatgaatattacttaaacatgtactagcccaattacatagcttaagaataatttctttttattcgattttttcattgttgcaccat 32137030  T
Q  544 caggttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    ||||||||||| |||||||| |||| |||||| | |||||||  |||||||||||| |||||||| ||||||||| ||||||||||||| |||| ||||    
T  32137029 caggttcgattttaattcctttccatctctttcaattcatttcaagtgatgaatttgtttcctttacttcccaatcatttgtttcatgcttatgtttct 32136931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 436 - 642
Target Start/End: Original strand, 40806458 - 40806661
Alignment:
Q  436 aaccaaaccaaactgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgt 535  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||| |||| |||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  40806458 aaccaaaccaaaccgcaagaataatgaatattacttaaatatgtactagctcaattacatagctcaagaataatctcttttgattcgattttttcattgt 40806557  T
Q  536 tgcaccatcaggttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgccta 635  Q
    ||   || |||||||||||||||||||| |||| |||||| | ||||||| || |||| ||||| |||||||| ||| ||||||||||||||||||| ||    
T  40806558 tg---caacaggttcgattctaattcctttccatctctttcaattcatttccaatgataaatttgtttcctttactttccaataatttgtttcatgctta 40806654  T
Q  636 tgcttct 642  Q
    || ||||    
T  40806655 tgtttct 40806661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 436 - 642
Target Start/End: Original strand, 23937160 - 23937366
Alignment:
Q  436 aaccaaaccaaactgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgt 535  Q
    |||||||| |||| ||||||||||| |||||||||||||||| || ||| ||||||||||| | |||||||||||||||| |||| ||||||||||||||    
T  23937160 aaccaaactaaaccgcaagaataataaatattacttaaacatatactagtccaattacataactcaagaataatctctttagatttgatttttccattgt 23937259  T
Q  536 tgcaccatcaggttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgccta 635  Q
    |||||||||| |||| |||||||||||| |||| |||||| | |||||||  |||||||||||| |||| |||  |||||||||||||||||||||| ||    
T  23937260 tgcaccatcatgttctattctaattcctttccatctctttcaattcatttctagtgatgaatttgtttcatttatttcccaataatttgtttcatgctta 23937359  T
Q  636 tgcttct 642  Q
    || ||||    
T  23937360 tgtttct 23937366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 386 - 642
Target Start/End: Complemental strand, 52345212 - 52344947
Alignment:
Q  386 ttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaacc----------aaaccaaactgcaagaataatgaatattacttaaac 475  Q
    ||||||||| ||| || |||||||||| ||||||||| ||||||||||||||||          ||||||||| ||||||||||||||||||||||||||    
T  52345212 ttttgcactgaaccgcacggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaagaataatgaatattacttaaac 52345113  T
Q  476 atgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcgattctaattcctctccacctcttt 575  Q
    ||||| ||| || ||| |||||| |||||||| || ||||||||| |||||||||||| ||||| |||||||||||||||||| |  | |||| ||||||    
T  52345112 atgtactagtccgattgcatagctcaagaatagtcgcttttgatttgatttttccattattgca-catcaggttcgattctaacttatttccaactcttt 52345014  T
Q  576 tatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
     | ||||| |||| |||||||||| |||||||| ||| ||||||||||||||||||| |||| ||||    
T  52345013 caattcatattcactgatgaatttgtttcctttactttccaataatttgtttcatgcttatgtttct 52344947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 436 - 642
Target Start/End: Complemental strand, 43630978 - 43630790
Alignment:
Q  436 aaccaaaccaaactgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgt 535  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||| |||||||| |||||||| |||||||                  |||| ||||||    
T  43630978 aaccaaaccaaaccgcaagaataatgaatattacttaaaaatgtaatagcccaactacatagctcaagaat------------------tttttcattgt 43630897  T
Q  536 tgcaccatcaggttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgccta 635  Q
    |||||||| | ||||||||||||||||| |||| |||||| | ||||||| ||||||||||||| |||||||| ||||||||||||||||||||||| ||    
T  43630896 tgcaccattaagttcgattctaattcctttccatctctttcaattcatttgcagtgatgaatttgtttcctttacttcccaataatttgtttcatgctta 43630797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 404 - 518
Target Start/End: Complemental strand, 52345328 - 52345214
Alignment:
Q  404 ggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaactgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaag 503  Q
    ||||||||| |||||| || |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||| ||||    
T  52345328 ggttcggttcggtttgtggtttgcatctcagcaaccgaaccaaaccgcaagaataatgaatattacttaaacatgtactagcccaattgcatagctcaag 52345229  T
Q  504 aataatctcttttga 518  Q
    |||| || |||||||    
T  52345228 aatagtcgcttttga 52345214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 357 - 448
Target Start/End: Original strand, 26477742 - 26477833
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaac 448  Q
    |||||||||||||||||||||||||||| ||||| ||||||| | ||||||||||||||||||||| |||||||||||||||| ||||||||    
T  26477742 cgcacttggttcggatgaattcggatgacttttgtactaaaccgtgcggttcggtttggtttgcggtttgcatctcagcaaccgaaccaaac 26477833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 508 - 612
Target Start/End: Complemental strand, 29639828 - 29639724
Alignment:
Q  508 atctcttttgattcgatttttccattgttgcaccatcaggttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttcctt 607  Q
    ||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||| |||| ||| || | ||||||| || |||||||||| |||| ||    
T  29639828 atctcctttaattcgatttttccattgttgcatcatcaggttcgattctaattcctttccatctccttcaattcatttccaatgatgaatttgtttcatt 29639729  T
Q  608 ttctt 612  Q
    |||||    
T  29639728 ttctt 29639724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 357 - 448
Target Start/End: Complemental strand, 29640105 - 29640014
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaac 448  Q
    |||||||||||||||||| ||||||||| ||||  ||| ||| ||||||||||||| ||||||||| |||||||||||||||| ||||||||    
T  29640105 cgcacttggttcggatgagttcggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaac 29640014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 357 - 448
Target Start/End: Original strand, 50570571 - 50570662
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaac 448  Q
    |||||||||||||||||| ||||||||| ||||  ||| ||| ||||||||||||| ||||||||| |||||||||||||||| ||||||||    
T  50570571 cgcacttggttcggatgagttcggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaac 50570662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 357 - 448
Target Start/End: Original strand, 29643320 - 29643411
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaac 448  Q
    |||| ||||||||||||| ||||||||| ||||  ||| ||| ||||||||||||| |||||| ||||||||||||||||||| ||||||||    
T  29643320 cgcatttggttcggatgagttcggatgacttttaaactgaaccgcgcggttcggttcggtttgtggcttgcatctcagcaaccgaaccaaac 29643411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 357 - 448
Target Start/End: Complemental strand, 42558193 - 42558102
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaac 448  Q
    |||||||||||||||||| ||||||||| ||||  ||| ||| | ||||||||||| ||||||||| |||||||||||||||| ||||||||    
T  42558193 cgcacttggttcggatgagttcggatgacttttagactgaaccgtgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaac 42558102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 357 - 447
Target Start/End: Original strand, 5261404 - 5261494
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaa 447  Q
    |||||||| ||||||||||||| ||||| ||||||||| ||| ||||||||||||| ||||||||| ||||||||||| || | |||||||    
T  5261404 cgcacttgattcggatgaattcagatgacttttgcactgaaccgcgcggttcggttcggtttgcggtttgcatctcagaaatcgaaccaaa 5261494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 357 - 448
Target Start/End: Complemental strand, 36078794 - 36078703
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaac 448  Q
    |||||||||||||||||| ||||||||| ||||  ||| ||| |||||||||||||  |||||| | |||||||||||||||| ||||||||    
T  36078794 cgcacttggttcggatgagttcggatgacttttagactgaaccgcgcggttcggttcagtttgcagtttgcatctcagcaaccgaaccaaac 36078703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 23675743 - 23675784
Alignment:
Q  150 ctttgttttttaagttatttttacttctaaagtattgatgat 191  Q
    |||||||||||||||||| ||||||| |||| ||||||||||    
T  23675743 ctttgttttttaagttatgtttacttttaaactattgatgat 23675784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 186; Significance: 1e-100; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 357 - 642
Target Start/End: Complemental strand, 22366974 - 22366689
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaactgcaagaa 456  Q
    |||||||||||| ||||||||||||||| ||||||||||||| | ||| || |||| ||||||||| |||||||| |||||||||||||||| |||||||    
T  22366974 cgcacttggttcagatgaattcggatgacttttgcactaaaccgtgcgatttggttcggtttgcggtttgcatcttagcaaccaaaccaaaccgcaagaa 22366875  T
Q  457 taatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcgattct 556  Q
    |||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||    
T  22366874 taatgaatattactcaaacatgtactagcccaattacatagctcaagaataatctctttcaattcggtttttccattgttgcaccatcaggttcgattct 22366775  T
Q  557 aattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    ||||||| |||| |||||| | ||||||| ||||||||||||| |||||||| ||||||||||||||||||||||| |||| ||||    
T  22366774 aattcctttccatctctttcaattcatttccagtgatgaatttgtttcctttacttcccaataatttgtttcatgcttatgtttct 22366689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 175; E-Value: 7e-94
Query Start/End: Original strand, 357 - 631
Target Start/End: Complemental strand, 32824120 - 32823846
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaactgcaagaa 456  Q
    ||||||||||| |||||||||||||||  ||||||||| ||| || |||||||||| ||||||||| ||||||||||||||||||||||||| ||| |||    
T  32824120 cgcacttggtttggatgaattcggatggcttttgcactgaaccgcacggttcggttcggtttgcggtttgcatctcagcaaccaaaccaaaccgcatgaa 32824021  T
Q  457 taatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcgattct 556  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  32824020 taatgaatattacttaaacatgtactagcccaattacatagctcaagaataatctcctttgattcgatttttccattgttgcaccatcaggttcgattct 32823921  T
Q  557 aattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatg 631  Q
    ||||||| |||| || ||| | |||||| ||| |||||||||| |||| ||| ||| ||||||||||| ||||||    
T  32823920 aattcctttccatctatttcaattcattctcactgatgaatttgtttcatttactttccaataatttgcttcatg 32823846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 357 - 628
Target Start/End: Complemental strand, 10070087 - 10069816
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaactgcaagaa 456  Q
    |||||||||||||||||||||||||||| ||||||||| ||| || | |||| ||| ||||||||  ||||||||||||||||||||||||| |||||||    
T  10070087 cgcacttggttcggatgaattcggatgacttttgcactgaaccgcacagttcagttcggtttgcgatttgcatctcagcaaccaaaccaaaccgcaagaa 10069988  T
Q  457 taatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcgattct 556  Q
    |||| |||||||||||||| ||||   |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||    
T  10069987 taatcaatattacttaaacttgtaccggcccaattacatagcccaagaataatcttttttgatttgatttttccattgttgcaccatcaggtttgattct 10069888  T
Q  557 aattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttc 628  Q
    ||||||| |||| ||| || | ||||||| || |||||||||| ||||||||||||||||||||||||||||    
T  10069887 aattcctttccatctccttcaattcatttccaatgatgaatttgtttccttttcttcccaataatttgtttc 10069816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 359 - 627
Target Start/End: Original strand, 31876197 - 31876470
Alignment:
Q  359 cacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaacc-----aaaccaaactgcaa 453  Q
    |||||| ||||||||||||||||||| ||||||| | ||| | |||||||| |||||||||||| ||||||||||||||||     ||||||||| ||||    
T  31876197 cacttgattcggatgaattcggatgacttttgcaatgaaccgtgcggttcgatttggtttgcggtttgcatctcagcaaccaaaccaaaccaaaccgcaa 31876296  T
Q  454 gaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcgat 553  Q
     |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  31876297 aaataatgaatattacttaaacatgtactagcccagttacatagctcaagaataatctcttttaattcgatttttccattgttgcaccatcagattcgat 31876396  T
Q  554 tctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgttt 627  Q
    |||||||| | |||| |||||||| ||||||| ||||||||| ||| |||||||| ||||| ||||||||||||    
T  31876397 tctaattcttttccatctcttttaattcatttccagtgatgactttgtttcctttacttccaaataatttgttt 31876470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 357 - 591
Target Start/End: Original strand, 42910230 - 42910469
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaacc-----aaaccaaactgc 451  Q
    |||||||||||||||||||||||||||| ||||||||| ||| | ||||||||||| ||||||||| ||||||||||||||||     ||||||||| ||    
T  42910230 cgcacttggttcggatgaattcggatgacttttgcactgaaccgtgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccgc 42910329  T
Q  452 aagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcg 551  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||    
T  42910330 aagaataatgaatattacttaaacatgtactagcccaattacatagctcaagaataatctcttttgatttgatttttccattgttgcaccatcaggtccg 42910429  T
Q  552 attctaattcctctccacctcttttatttcattttcagtg 591  Q
    |||||||||||| |||| |||||| | ||||||| |||||    
T  42910430 attctaattcctttccatctctttcaattcatttccagtg 42910469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 357 - 630
Target Start/End: Original strand, 36921105 - 36921385
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaacc-----aaaccaaactgc 451  Q
    |||||||||||||||||||||||||| | ||||||| | |||  |||||||||||||||||||| | ||||||||||||||||     ||||||||| ||    
T  36921105 cgcacttggttcggatgaattcggattacttttgcattgaaccacgcggttcggtttggtttgcagtttgcatctcagcaaccgaaccaaaccaaaccgc 36921204  T
Q  452 aagaataatgaatattacttaaacatgtattagccc--aattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggtt 549  Q
    ||||||||||||||||||||||||||||| || |||  ||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  36921205 aagaataatgaatattacttaaacatgtactaacccccaattacatagctcaagaataatcgcttttgattcgattttttcattgttgcaccatcaggtt 36921304  T
Q  550 cgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcat 630  Q
    |||||||||||| | |||| |||||| | |||||||||| |||| ||||| |||| ||| |||||||||||||||||||||    
T  36921305 cgattctaattcttttccatctctttcaattcattttcaatgataaatttgtttcttttacttcccaataatttgtttcat 36921385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 358 - 631
Target Start/End: Original strand, 31982221 - 31982480
Alignment:
Q  358 gcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaactgcaagaat 457  Q
    ||||||| ||||||||||||| ||||| ||||||||| |||||||||||| |||||| ||||||| |||||||| |||||||||||||||| |||| |||    
T  31982221 gcacttgattcggatgaattcagatgacttttgcactgaactgcgcggtttggtttgatttgcggtttgcatcttagcaaccaaaccaaaccgcaaaaat 31982320  T
Q  458 aatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcgattcta 557  Q
    ||| |||||||||||||  ||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||    
T  31982321 aatcaatattacttaaatttgtaccagcccaattacatagcccaagaataatctcttttgatttgatttttccattgttgcaccatcaaattcgattcta 31982420  T
Q  558 attcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatg 631  Q
    ||||||              |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  31982421 attcct--------------tttcattttcagtgatgaatttgtttccttttcttcccaataatttgtttcatg 31982480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 357 - 632
Target Start/End: Complemental strand, 43429702 - 43429417
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaacc----------aaaccaa 446  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||  ||||||||| ||||||||| ||||||||||||||||          |||||||    
T  43429702 cgcacttggttcggatgaattcggatgacttttgcactaaaccgcatggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaa 43429603  T
Q  447 actgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcag 546  Q
    || ||||||||||||| |||||||||||| |||| | | ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  43429602 accgcaagaataatgactattacttaaacgtgtactcgtccaattacatagctcaagaaaaatctcttttgattcgatttttccattgttgcaccatcag 43429503  T
Q  547 gttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgc 632  Q
    |||| |||||||||||| |||| ||||||   ||||||| || |||||||||| |||||||| ||| ||||||||| |||||||||    
T  43429502 gttcaattctaattcctttccatctctttcgattcatttccaatgatgaatttgtttcctttactttccaataattagtttcatgc 43429417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 358 - 642
Target Start/End: Complemental strand, 13852839 - 13852547
Alignment:
Q  358 gcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaac----------caaaccaaa 447  Q
    ||||||||||||||||||||||||||| ||||||||| ||| | | |||||||||  |||||||| |||||||||||||||          |||||||||    
T  13852839 gcacttggttcggatgaattcggatgacttttgcactgaaccgagtggttcggttctgtttgcggtttgcatctcagcaactgaaccaaaccaaaccaaa 13852740  T
Q  448 ctgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcagg 547  Q
    ||||||||||||||||||||| ||||| ||||| || | |||||||||||| ||||||||||||||||||||||||||||| |||||||  |||||||||    
T  13852739 ctgcaagaataatgaatattatttaaatatgtactaactcaattacatagctcaagaataatctcttttgattcgattttttcattgtt--accatcagg 13852642  T
Q  548 ttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    ||||||| |||||||| |||| |||||| | ||||||| ||||||||||||| |||||||| ||| ||||||||||||||||||| |||| ||||    
T  13852641 ttcgattataattcctttccatctctttcaattcatttacagtgatgaatttgtttcctttactttccaataatttgtttcatgcttatgtttct 13852547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 436 - 642
Target Start/End: Original strand, 24360931 - 24361137
Alignment:
Q  436 aaccaaaccaaactgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgt 535  Q
    ||||||||||||| ||||||||||||| ||||||||||| ||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||    
T  24360931 aaccaaaccaaaccgcaagaataatgactattacttaaatatgtactagcccaattacatagctcaagaataatcccttttgattcgattttttcattgt 24361030  T
Q  536 tgcaccatcaggttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgccta 635  Q
    |||||||||| |||| |||||||||||| ||||  ||||| | ||||||| ||||||||||||| |||||||| ||||||||||||||||||||||| ||    
T  24361031 tgcaccatcaagttcaattctaattcctttccatttctttcaattcatttccagtgatgaatttgtttcctttacttcccaataatttgtttcatgctta 24361130  T
Q  636 tgcttct 642  Q
    || ||||    
T  24361131 tgtttct 24361137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 452 - 631
Target Start/End: Complemental strand, 48675541 - 48675362
Alignment:
Q  452 aagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcg 551  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||  || ||||| |||||||| || |||| ||||||||||||||||||||||| |    
T  48675541 aagaataataaatattacttaaacatgtattagcctaattacatagctaaaaaataacctcttttggtttgattattccattgttgcaccatcaggtttg 48675442  T
Q  552 attctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatg 631  Q
    |||||||||| | |||| |||||| | ||||||||||||||||||||| |||||||| ||||| ||||||||||||||||    
T  48675441 attctaattcatttccatctctttgaattcattttcagtgatgaatttgtttcctttacttcctaataatttgtttcatg 48675362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 357 - 553
Target Start/End: Original strand, 27054276 - 27054483
Alignment:
Q  357 cgcacttggtt-cggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaa----------ccaaacca 445  Q
    ||||||||||| ||||||||||| ||||| ||||||||||||| | ||| || |||||||||||||| |||||| |||||||          ||||||||    
T  27054276 cgcacttggtttcggatgaattcagatgacttttgcactaaaccgtgcgatttggtttggtttgcggtttgcatatcagcaatcgaaccaaaccaaacca 27054375  T
Q  446 aactgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatca 545  Q
    |||  |||||||||||||||||||||||| ||||| ||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||    
T  27054376 aaccacaagaataatgaatattacttaaatatgtactagcccaattacataactcaagaataatctcttttgattcgattttttcattgttgcaccatca 27054475  T
Q  546 ggttcgat 553  Q
     |||||||    
T  27054476 tgttcgat 27054483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 357 - 642
Target Start/End: Complemental strand, 47903753 - 47903473
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaacc----------aa 446  Q
    |||||||||||||||||||||||||||| ||||||||| ||| |||| ||||| || ||||||||| |||||||||||||||| ||||          ||    
T  47903753 cgcacttggttcggatgaattcggatgacttttgcactgaaccgcgcagttcgtttcggtttgcggtttgcatctcagcaaccgaaccaaaacaacccaa 47903654  T
Q  447 actgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcag 546  Q
    ||  ||||||||||||||| ||               ||| ||||||||||| |||||||| | | ||| |||||||||||| |||||||||||||||||    
T  47903653 accacaagaataatgaatacta---------------gccaaattacatagctcaagaatactatttttcgattcgattttttcattgttgcaccatcag 47903569  T
Q  547 gttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    |||||||| |||||| | ||||  ||||| | ||||||| ||||||||||||| ||||||||  |||||||||||||||||||||| |||| ||||    
T  47903568 gttcgattataattcatttccatatctttcaattcatttccagtgatgaatttgtttcctttatttcccaataatttgtttcatgcttatgtttct 47903473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 365 - 544
Target Start/End: Original strand, 18672777 - 18672966
Alignment:
Q  365 gttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaacc----------aaaccaaactgcaag 454  Q
    |||| ||||||||||||||||||||||| |  || |||| |||||||| |||||| || ||||||||||||||||          ||||||||| ||||     
T  18672777 gttcagatgaattcggatgatttttgcattggaccgcgcagttcggttcggtttgtggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaat 18672876  T
Q  455 aataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatc 544  Q
    |||||| |||||||||||||| |||| ||||||||||||||||| || |||||||||||||||||| |||||||| ||||||||||||||    
T  18672877 aataatcaatattacttaaacttgtactagcccaattacatagcacaggaataatctcttttgattagatttttctattgttgcaccatc 18672966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 357 - 561
Target Start/End: Complemental strand, 5933152 - 5932944
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtt-----tgcggcttgcatctcagcaaccaaaccaaactgc 451  Q
    |||||||||||||||| ||||| ||||| ||||||||| ||| ||||||||||||| ||||     ||||| ||| |||||||||||| ||||||||       
T  5933152 cgcacttggttcggataaattcagatgacttttgcactgaaccgcgcggttcggttcggttcggtttgcggtttgtatctcagcaaccgaaccaaaccaa 5933053  T
Q  452 aagaa----taatgaatatt-acttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcag 546  Q
    |  ||    ||| ||||| | ||||||||||||| ||||||||||||||||| ||||||||||||||     ||||||||||||||||||||||||||||    
T  5933052 accaaatcgtaa-gaataatgacttaaacatgtactagcccaattacatagctcaagaataatctct-----ttcgatttttccattgttgcaccatcag 5932959  T
Q  547 gttcgattctaattc 561  Q
     || |||||||||||    
T  5932958 atttgattctaattc 5932944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 357 - 503
Target Start/End: Complemental strand, 36509166 - 36509024
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaactgcaagaa 456  Q
    ||||||||||||||||||||||  |||| ||||||| | ||| | ||||||||||||||||||||| |||    ||||||| | |||||||| |||||||    
T  36509166 cgcacttggttcggatgaattcatatgacttttgcattgaaccgtgcggttcggtttggtttgcggtttg----tcagcaatcgaaccaaaccgcaagaa 36509071  T
Q  457 taatgaatattacttaaacatgtattagcccaattacatagcccaag 503  Q
    |||| |||||||||||||  ||||  |||||||||||||||||||||    
T  36509070 taatcaatattacttaaatttgtacgagcccaattacatagcccaag 36509024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 357 - 458
Target Start/End: Original strand, 11205991 - 11206092
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaactgcaagaa 456  Q
    |||||||||||||||||| ||||||||| ||||  ||| ||| ||||||||||||| ||||||||| |||||||||||||||| |||||||| |||| ||    
T  11205991 cgcacttggttcggatgagttcggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaccgcaaaaa 11206090  T
Q  457 ta 458  Q
    ||    
T  11206091 ta 11206092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 357 - 448
Target Start/End: Original strand, 3211755 - 3211846
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaac 448  Q
    |||||||||||||||||| ||||||||| ||||  ||| ||| ||||||||||||| ||||||||| |||||||||||||||| ||||||||    
T  3211755 cgcacttggttcggatgagttcggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaac 3211846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 357 - 448
Target Start/End: Complemental strand, 47070138 - 47070047
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaac 448  Q
    |||||||||||||||||| ||||||||| ||||  ||| ||| ||||||||||||| ||||||||| |||||||||||||||| ||||||||    
T  47070138 cgcacttggttcggatgagttcggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaac 47070047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 359 - 448
Target Start/End: Complemental strand, 12118068 - 12117979
Alignment:
Q  359 cacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaac 448  Q
    |||||||||||||||| ||||||||| ||||  ||| ||| ||||||||||||| ||||||||  |||||||||||||||||||||||||    
T  12118068 cacttggttcggatgagttcggatgacttttagactgaaccgcgcggttcggttcggtttgcgatttgcatctcagcaaccaaaccaaac 12117979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 357 - 448
Target Start/End: Original strand, 8768279 - 8768370
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaac 448  Q
    |||||||||||||||||| ||||||||| ||||  ||| ||| ||||||||||||| |||||| || |||||||||||||||| ||||||||    
T  8768279 cgcacttggttcggatgagttcggatgacttttagactgaaccgcgcggttcggttcggtttgtggtttgcatctcagcaaccgaaccaaac 8768370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 357 - 448
Target Start/End: Complemental strand, 10672289 - 10672198
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaac 448  Q
    |||||||||||||||||| ||||||||| ||||  ||| ||| | ||||||||||| ||||||||| |||||||||||||||| ||||||||    
T  10672289 cgcacttggttcggatgagttcggatgacttttagactgaaccgtgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaac 10672198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 547 - 642
Target Start/End: Complemental strand, 36509024 - 36508929
Alignment:
Q  547 gttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    ||||||||||| || || |||| ||| || | || |||||| ||||||||||| ||||||||||| ||||||||||||||||| || |||||||||    
T  36509024 gttcgattctatttgctttccatctccttcaattaattttcggtgatgaatttgtttccttttctccccaataatttgtttcaggcttatgcttct 36508929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 579 - 642
Target Start/End: Original strand, 18672975 - 18673038
Alignment:
Q  579 ttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    ||||||| || |||||||||| |||||||||||||| ||||||||||||||||| |||| ||||    
T  18672975 ttcatttccattgatgaatttgtttccttttcttccaaataatttgtttcatgcttatgtttct 18673038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 400 - 448
Target Start/End: Original strand, 47204113 - 47204161
Alignment:
Q  400 gcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaac 448  Q
    ||||||||||||| ||||||||| |||||||||||||||| ||||||||    
T  47204113 gcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaac 47204161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 357 - 407
Target Start/End: Complemental strand, 1335934 - 1335884
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggtt 407  Q
    ||||||||||| |||||||||| ||||| ||||||||||||| ||||||||    
T  1335934 cgcacttggtttggatgaattcagatgacttttgcactaaaccgcgcggtt 1335884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 579 - 642
Target Start/End: Complemental strand, 5932946 - 5932883
Alignment:
Q  579 ttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    ||||||||||||||||||||| |||||||| ||| | |||||||| |||| ||| |||| ||||    
T  5932946 ttcattttcagtgatgaatttgtttcctttactttctaataatttatttcttgcttatgtttct 5932883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 595 - 632
Target Start/End: Original strand, 27054549 - 27054586
Alignment:
Q  595 aatttatttccttttcttcccaataatttgtttcatgc 632  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  27054549 aatttgtttcctttacttcccaataatttgtttcatgc 27054586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 357 - 393
Target Start/End: Original strand, 24360844 - 24360880
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcac 393  Q
    ||||||||||| |||||||||||||||| ||||||||    
T  24360844 cgcacttggtttggatgaattcggatgacttttgcac 24360880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 357 - 389
Target Start/End: Original strand, 45898104 - 45898136
Alignment:
Q  357 cgcacttggttcggatgaattcggatgattttt 389  Q
    ||||||||||||||||||||||||||| |||||    
T  45898104 cgcacttggttcggatgaattcggatgcttttt 45898136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 359 - 632
Target Start/End: Original strand, 6003944 - 6004227
Alignment:
Q  359 cacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagc----------aaccaaaccaaac 448  Q
    |||||||||||||||||||||||||| ||||||||| ||| ||| |||| |||| ||||||||| ||||||||||||          |||||||||||||    
T  6003944 cacttggttcggatgaattcggatgacttttgcactgaaccgcgaggtttggttcggtttgcggtttgcatctcagctaccgaaccaaaccaaaccaaac 6004043  T
Q  449 tgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggt 548  Q
     ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6004044 cgcaagaataatgaatgttacttaaacatgtactagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggt 6004143  T
Q  549 tcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgc 632  Q
    || |||||||||||| |||| |||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  6004144 tcaattctaattcctttccatctcttttaattcatttccagtgatgaatttgtttccttttcttcccaataatttgtttcatgc 6004227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 376 - 642
Target Start/End: Original strand, 50562159 - 50562425
Alignment:
Q  376 ttcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaactgcaagaataatgaatattacttaaac 475  Q
    ||||||||| |||| |||| ||  | ||| ||||||| | ||||||  |||||||||| |||| |||||||||  |||||||||||||||||||||||||    
T  50562159 ttcggatgacttttacactgaatcgtgcgattcggttcgatttgcgatttgcatctcaacaacaaaaccaaaccccaagaataatgaatattacttaaac 50562258  T
Q  476 atgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcgattctaattcctctccacctcttt 575  Q
    ||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  50562259 atgtactagcccaattacatagctcaagaataatctctttcgattcgatttttccattgttgcaccatcaggttcgattctaattcctttccatctcttt 50562358  T
Q  576 tatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
     | || |||||||||||||||||| |||| ||| ||||| ||||||||||||||||| |||| ||||    
T  50562359 caatttattttcagtgatgaatttgtttcatttacttccaaataatttgtttcatgcttatgtttct 50562425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 358 - 632
Target Start/End: Original strand, 35531712 - 35531991
Alignment:
Q  358 gcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaacc-----aaaccaaactgca 452  Q
    ||||||||||||||||||||| | ||| ||||||||| ||| || |||||| ||| | ||||| | ||||||||||||||||     ||||||||| |||    
T  35531712 gcacttggttcggatgaattcaggtgacttttgcactgaaccgcacggttcagttcgatttgcagtttgcatctcagcaaccgaaccaaaccaaaccgca 35531811  T
Q  453 agaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcga 552  Q
    |||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||  |||| |||||||||||||||||||||||||||| ||||||    
T  35531812 agaataatgaatattacttaaacatgtactagcccaattgcatagctcaagaataatcgttttttattcgatttttccattgttgcaccatcatgttcga 35531911  T
Q  553 ttctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgc 632  Q
    ||||||||||| |||| |||||| | ||||||| |  | |||||| | |||||||| |||||||||||||||||||||||    
T  35531912 ttctaattcctttccatctctttcaattcatttccgtttatgaatgtgtttcctttacttcccaataatttgtttcatgc 35531991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 358 - 642
Target Start/End: Original strand, 21586402 - 21586690
Alignment:
Q  358 gcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaact-------- 449  Q
    |||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||     | | |||||||||||||||| ||||||||             
T  21586402 gcacttggttcggatgaatttggatgacttttgcactaaaccgcgcggttcggtttg-----cagtttgcatctcagcaaccgaaccaaaccaaccaaat 21586496  T
Q  450 -gcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggt 548  Q
     ||||||||||||||||||||||||||||||| ||||| ||||||||||  |||||||||| ||||| ||||||||||||||||||||||||||| ||||    
T  21586497 cgcaagaataatgaatattacttaaacatgtactagccaaattacatagttcaagaataatatctttcgattcgatttttccattgttgcaccatgaggt 21586596  T
Q  549 tcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    ||||||||||||||| |||| |||||| | ||||||| | ||||||||||| ||||||||  ||| || ||||||||||||||| |||| ||||    
T  21586597 tcgattctaattcctttccatctctttcaattcatttccggtgatgaatttgtttcctttatttctcagtaatttgtttcatgcttatgtttct 21586690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 376 - 630
Target Start/End: Complemental strand, 32880816 - 32880547
Alignment:
Q  376 ttcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaacc-----aaaccaaactgcaagaataatgaatattact 470  Q
    ||||||||| ||||||||| ||| |||| |||||||||||||| ||| ||||||||||||||||     ||||||||| ||||||| |||||||||||||    
T  32880816 ttcggatgacttttgcactgaaccgcgcagttcggtttggtttacggtttgcatctcagcaaccgaaccaaaccaaaccgcaagaaaaatgaatattact 32880717  T
Q  471 taaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcgattctaattcctctccacc 570  Q
    |||||||||| ||| ||||||||||||| ||||  |||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||| |||| |    
T  32880716 taaacatgtactagtccaattacatagctcaagtttaatctctttcgatttgatttttccattgttgcaccatcaggtttgattctaattcctttccatc 32880617  T
Q  571 tctttta----------tttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcat 630  Q
    ||||| |           ||||||| ||||||||||||| |||||||| |||||||||||||| ||||||    
T  32880616 tctttcaattcatttccattcatttccagtgatgaatttgtttcctttacttcccaataatttctttcat 32880547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 500 - 642
Target Start/End: Original strand, 27641870 - 27642012
Alignment:
Q  500 caagaataatctcttttgattcgatttttccattgttgcaccatcaggttcgattctaattcctctccacctcttttatttcattttcagtgatgaattt 599  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||| | |||||||||||||||||||||    
T  27641870 caagaataatctcttttgattcgatttttccattgtagcaccatcaggttcgaatctaattcctctccatctctttcaattcattttcagtgatgaattt 27641969  T
Q  600 atttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    ||||||||||||||||||||||||||||||||| |||| ||||    
T  27641970 atttccttttcttcccaataatttgtttcatgcttatgtttct 27642012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 18 - 181
Target Start/End: Original strand, 27641464 - 27641625
Alignment:
Q  18 actttcggccttagtttgtttgtgtctggttgggattgtgtttggctctatgctgcaaaggggactagttttgctgcaaaggggatttgggtttattagt 117  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  27641464 actttcggccttagtttgtttgtgtccggttgggattgtgtttggctctttgctgcaaaggggactagttttgctgcaaagaggatttgggtttattaat 27641563  T
Q  118 tttatttgttgttaaagnnnnnnncatgcaggctttgttttttaagttatttttacttctaaag 181  Q
    |||||||| |||||||        |||| ||||||||||||||||||||||||||||| |||||    
T  27641564 tttatttgatgttaaa--aaaaaacatgtaggctttgttttttaagttatttttacttttaaag 27641625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 440 - 642
Target Start/End: Complemental strand, 33002958 - 33002756
Alignment:
Q  440 aaaccaaactgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgca 539  Q
    ||||||||| |||||||||||||||||| |||||| |||||  || ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  33002958 aaaccaaaccgcaagaataatgaatatttcttaaatatgtaccagtccaattacatagctcaataataatctcttttgattcgatttttccattgttgca 33002859  T
Q  540 ccatcaggttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgct 639  Q
    ||||||||||||||||||| |||| |||| |||||| | || |||| | |||| | |||| |||||||| ||  ||||||||||||||||||| |||| |    
T  33002858 ccatcaggttcgattctaactcctttccatctctttcaatttatttcctgtgaagtatttgtttcctttactctccaataatttgtttcatgcttatgtt 33002759  T
Q  640 tct 642  Q
    |||    
T  33002758 tct 33002756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 424 - 632
Target Start/End: Complemental strand, 39098390 - 39098187
Alignment:
Q  424 ttgcatctcagcaaccaaaccaaactgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcga 523  Q
    |||||||||||||||| ||||     ||||||||||||||||||||||||||||||| || | |||||| ||||| |||||||||||| |||||| ||||    
T  39098390 ttgcatctcagcaaccgaacc-----gcaagaataatgaatattacttaaacatgtactaacacaattaaatagctcaagaataatcttttttgaatcga 39098296  T
Q  524 tttttccattgttgcaccatcaggttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataattt 623  Q
    ||||| |||||||||||||||||| | |||||||||| || |||| |||||| | |||||||  |||||  || || |||||||| ||||||||||||||    
T  39098295 ttttttcattgttgcaccatcaggattgattctaatttctttccatctctttcaattcatttcgagtgacaaacttgtttcctttacttcccaataattt 39098196  T
Q  624 gtttcatgc 632  Q
    |||| ||||    
T  39098195 gtttgatgc 39098187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 482 - 642
Target Start/End: Complemental strand, 43030825 - 43030666
Alignment:
Q  482 tagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcgattctaattcctctccacctcttttatttc 581  Q
    ||||| ||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||| | |||    
T  43030825 tagccaaattacatagctcaagaataatctttttcgattcgatttttccattgttgcaccatcaagttcgattctaattcctttccatctctttcaattc 43030726  T
Q  582 attttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    || | ||||||||||||| ||||||||  |||||||||||||||||||||| |||| ||||    
T  43030725 atctccagtgatgaattt-tttcctttatttcccaataatttgtttcatgcttatgtttct 43030666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 357 - 493
Target Start/End: Original strand, 48032690 - 48032836
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagc----------aaccaaaccaa 446  Q
    |||||||||||| ||||||||||||||| ||||||| | ||| ||||||||||||||||||||||| ||||||||||||          |||||||||||    
T  48032690 cgcacttggttcagatgaattcggatgacttttgcaatgaaccgcgcggttcggtttggtttgcggtttgcatctcagcagccgaaccaaaccaaaccaa 48032789  T
Q  447 actgcaagaataatgaatattacttaaacatgtattagcccaattac 493  Q
    || |||||||| |||||||||||||||||||||| ||||||||||||    
T  48032790 accgcaagaatcatgaatattacttaaacatgtactagcccaattac 48032836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 357 - 448
Target Start/End: Complemental strand, 10369721 - 10369630
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaac 448  Q
    |||||||||||||||||||||||||||| ||||  ||| ||| ||||||||||||| ||||||||| |||||||||||||||| ||||||||    
T  10369721 cgcacttggttcggatgaattcggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaac 10369630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 214 - 290
Target Start/End: Original strand, 27641628 - 27641704
Alignment:
Q  214 tattttttaatctccaaatgattagtgtaatggtttacttatccaagtccgtatatttggtttcaattaggggtgtt 290  Q
    |||||||||||||||||||||||  |||||||||| | |||||||||||||||||||||||||||| ||||||||||    
T  27641628 tattttttaatctccaaatgattgctgtaatggttcatttatccaagtccgtatatttggtttcaactaggggtgtt 27641704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 357 - 448
Target Start/End: Original strand, 4669206 - 4669297
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaac 448  Q
    |||||||||||||||||| ||||||||| ||||  ||| ||| ||||||||||||| ||||||||  |||||||||||||||||||||||||    
T  4669206 cgcacttggttcggatgagttcggatgacttttagactgaaccgcgcggttcggttcggtttgcgatttgcatctcagcaaccaaaccaaac 4669297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 357 - 460
Target Start/End: Original strand, 27641771 - 27641879
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagc-----aaccaaaccaaactgc 451  Q
    |||||||||||||||||||||| ||||| ||||||||| ||| ||| |||| | |||||||||||| ||||||||||||     ||||||||||||| ||    
T  27641771 cgcacttggttcggatgaattcagatgacttttgcactgaaccgcgtggtttgatttggtttgcggtttgcatctcagccactaaaccaaaccaaaccgc 27641870  T
Q  452 aagaataat 460  Q
    |||||||||    
T  27641871 aagaataat 27641879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 357 - 448
Target Start/End: Original strand, 35401783 - 35401874
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaac 448  Q
    |||||||||||||||||| ||||||||| ||||  ||| ||| ||||||||||||| ||||||||| |||||||||||||| | ||||||||    
T  35401783 cgcacttggttcggatgagttcggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaatcgaaccaaac 35401874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 357 - 448
Target Start/End: Original strand, 51149281 - 51149372
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaac 448  Q
    |||||||||||||||||| ||||||||| ||||  ||| ||| ||||||||||||| ||||| ||| |||||||||||||||| ||||||||    
T  51149281 cgcacttggttcggatgagttcggatgacttttagactgaaccgcgcggttcggttcggtttacggtttgcatctcagcaacctaaccaaac 51149372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 357 - 444
Target Start/End: Complemental strand, 33361423 - 33361336
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaacc 444  Q
    |||||||||||||||||| ||||||||| ||||  ||| ||| ||||||||  |||  |||||||| |||||||||||||||| ||||    
T  33361423 cgcacttggttcggatgagttcggatgacttttagactgaaccgcgcggtttagttcagtttgcggtttgcatctcagcaaccgaacc 33361336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 376 - 448
Target Start/End: Complemental strand, 34795015 - 34794943
Alignment:
Q  376 ttcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaac 448  Q
    ||||||||| ||||  ||| ||| | ||||||||||| ||||||||| |||||||||||||||| ||||||||    
T  34795015 ttcggatgacttttagactgaaccgtgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaac 34794943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 375 - 448
Target Start/End: Complemental strand, 43030923 - 43030855
Alignment:
Q  375 attcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaac 448  Q
    |||||||||| ||||||||| |||| ||||||||||||||     ||| |||||||||||||||| ||||||||    
T  43030923 attcggatgacttttgcacttaactacgcggttcggtttg-----cggtttgcatctcagcaaccgaaccaaac 43030855  T

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Target: chr2 (Bit Score: 183; Significance: 1e-98; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 357 - 642
Target Start/End: Complemental strand, 11376415 - 11376125
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaac-----caaaccaaactgc 451  Q
    |||||||||||||||||||||| ||||| ||||||||| ||| ||||||||||||| ||||||| | |||||||||||||||     |||||||||| ||    
T  11376415 cgcacttggttcggatgaattcagatgacttttgcactgaaccgcgcggttcggttcggtttgcagtttgcatctcagcaactgaaccaaaccaaaccgc 11376316  T
Q  452 aagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcg 551  Q
    ||||||| ||||||||||||||||||||| |||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11376315 aagaatactgaatattacttaaacatgtactagctcaattgcatagcccaagaataatcgcttttgattcgatttttccattgttgcaccatcaggttcg 11376216  T
Q  552 attctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    |||||||||||| |||| |||||| | ||||||| ||||||||||||| |||||||| ||||||||||||||||||||||| |||| ||||    
T  11376215 attctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcctttacttcccaataatttgtttcatgcttatgtttct 11376125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 357 - 642
Target Start/End: Original strand, 44979324 - 44979619
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagc----------aaccaaaccaa 446  Q
    |||||||||||||||||||||||||||| ||||||||| ||| |||||||| | |||||||||||| ||||||||||||          |||||||||||    
T  44979324 cgcacttggttcggatgaattcggatgaattttgcactgaaccgcgcggtttgatttggtttgcggtttgcatctcagctaccgaaccaaaccaaaccaa 44979423  T
Q  447 actgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcag 546  Q
    || ||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||    
T  44979424 accgcaagaataatgaatgttacttaaacatgtactagcccaattacatagcccaggaataatctcttttgattcgatttttccattgttgcaccatgag 44979523  T
Q  547 gttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    |||| |||||||||||| |||| |||||||| ||||||| ||||||||||||| |||||||||||| ||||||||||| ||||||| |||| ||||    
T  44979524 gttcaattctaattcctttccatctcttttaattcatttccagtgatgaatttgtttccttttctttccaataatttgcttcatgcttatgtttct 44979619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 357 - 638
Target Start/End: Original strand, 25297805 - 25298096
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaacc----------aaaccaa 446  Q
    |||||||| ||||||||||||||||||| ||||||  | ||| || ||||||||||||||||| || ||||||||||||||||          |||||||    
T  25297805 cgcacttgattcggatgaattcggatgacttttgctttgaaccgcacggttcggtttggtttgtggtttgcatctcagcaaccgaaccaaaccaaaccaa 25297904  T
Q  447 actgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcag 546  Q
    || ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  25297905 accgcaagaataatgaatattacttaaacatgtactagcccaattacatagctcaagaataatcgcttttgattcgatttttccattgttgcaccatcag 25298004  T
Q  547 gttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgc 638  Q
    |||||||||||||| || |||| |||||| | || |||| ||||||||||||| |||| ||| ||||||||||||||||||||||| |||||    
T  25298005 gttcgattctaatttctttccatctctttcaatttatttccagtgatgaatttgtttcatttacttcccaataatttgtttcatgcttatgc 25298096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 357 - 642
Target Start/End: Original strand, 19936674 - 19936964
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaacc-----aaaccaaactgc 451  Q
    |||||||||||||||||||||| ||||  |||| |||| ||||||||||||||||| ||||||| | ||| ||||||||||||     ||||||||| ||    
T  19936674 cgcacttggttcggatgaattcagatgtctttttcactgaactgcgcggttcggttcggtttgcagtttgtatctcagcaaccaaaccaaaccaaaccgc 19936773  T
Q  452 aagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcg 551  Q
    ||||||||||||||||||||| ||||||| |||| ||| |||||||| |||||||||| | |||||||||||||||| |||||||||||||||| |||||    
T  19936774 aagaataatgaatattacttatacatgtactagctcaaatacatagctcaagaataatatattttgattcgattttttcattgttgcaccatcatgttcg 19936873  T
Q  552 attctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    ||||||||| || |||| ||| || | ||||||| ||||| ||||||| |||||||| ||||||||||||||||||||||| |||| ||||    
T  19936874 attctaatttctttccatctcattcaattcatttccagtgctgaatttgtttcctttacttcccaataatttgtttcatgcttatgtttct 19936964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 359 - 642
Target Start/End: Complemental strand, 34910841 - 34910547
Alignment:
Q  359 cacttggttcggatgaattcggatgatttttgcactaaactgcgcg-----gttcggtttggtttgcggcttgcatctcagcaacc-----aaaccaaac 448  Q
    |||||||||||||||||||| ||||| ||||||| ||||| |||||     |||||||||||||| ||| ||| |||| |||||||     |||||||||    
T  34910841 cacttggttcggatgaattcagatgacttttgcaataaaccgcgcgtttcggttcggtttggtttacggtttgaatctgagcaaccgaaacaaaccaaac 34910742  T
Q  449 tgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggt 548  Q
     ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  34910741 cgcaagaataatgaatattacttaaacatgtactaacccaattacatagcccaagaataatatcttttgattcgatttttccattgttgcaccatcaagt 34910642  T
Q  549 tcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttc-ttcccaataatttgtttcatgcctatgcttct 642  Q
    ||||||||||||| | | ||  ||| | | ||||||||| ||||||||||| |||||||||| |||||||||||||||||||||| |||| ||||    
T  34910641 tcgattctaattcgttttcatttctctcaattcattttctgtgatgaatttgtttccttttctttcccaataatttgtttcatgcttatgtttct 34910547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 376 - 642
Target Start/End: Complemental strand, 44035824 - 44035548
Alignment:
Q  376 ttcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaacc----------aaaccaaactgcaagaataatgaata 465  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||| ||| ||||||||||||||||          ||||||||| |||| |||||||||||    
T  44035824 ttcggatgacttttgcactgaaccgcgcggttcggtttggtttacggtttgcatctcagcaaccgaaccaaaccaaaccaaaccgcaaaaataatgaata 44035725  T
Q  466 ttacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcgattctaattcctct 565  Q
    ||||||||||||||| |||| || ||||||| | ||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||| |    
T  44035724 ttacttaaacatgtactagctcagttacataactcaagaataatctcttttgattcgattttttcattgttgcacgatcaagttcgattctaattccttt 44035625  T
Q  566 ccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    ||| |||||| | ||||||| ||||||||||||| |||||||| ||||| |||| |||||||| ||| |||| ||||    
T  44035624 ccatctctttcaattcatttccagtgatgaatttgtttcctttacttccaaatattttgtttcttgcttatgtttct 44035548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 357 - 642
Target Start/End: Original strand, 17916413 - 17916704
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaacc----------aaaccaa 446  Q
    |||||||| |||||||||||||| |||| |||| |      |||||||||||||||||||||| || ||||||||||||||||          |||||||    
T  17916413 cgcacttgattcggatgaattcgaatgactttttc------ctgcgcggttcggtttggtttgtggtttgcatctcagcaaccgagccaaaccaaaccaa 17916506  T
Q  447 actgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatc-- 544  Q
    || ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||  |||||||||| ||||||||||      
T  17916507 accgcaagaataatgaatattacttaaacatgtactagcccaattacatagctcaagaataatctcttttgattcattttttccattattgcaccatcag 17916606  T
Q  545 aggttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    |||||||||| |||||||| |||| |||||| | ||||||| ||||||||||||| ||| |||| ||||| ||||||||||||||||| |||| ||||    
T  17916607 aggttcgattataattcctttccatctctttcaattcatttccagtgatgaatttgttttctttacttccaaataatttgtttcatgcttatgtttct 17916704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 357 - 560
Target Start/End: Complemental strand, 18360334 - 18360121
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaacc----------aaaccaa 446  Q
    |||||||||||||||| |||||| |||| ||||||| | |||  |||||||||||||||||| | | ||||||||||||||||          |||||||    
T  18360334 cgcacttggttcggataaattcgaatgacttttgcattgaaccacgcggttcggtttggtttacagtttgcatctcagcaaccgaaccaaaccaaaccaa 18360235  T
Q  447 actgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcag 546  Q
    || ||||||||||| |||||||||||||| |||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||     
T  18360234 accgcaagaataatcaatattacttaaacttgtactagcccaattacatagcccgaaaataatctcttttgattcgatttttccattgttgcaccatcat 18360135  T
Q  547 gttcgattctaatt 560  Q
    ||||||||||||||    
T  18360134 gttcgattctaatt 18360121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 508 - 642
Target Start/End: Complemental strand, 20420572 - 20420438
Alignment:
Q  508 atctcttttgattcgatttttccattgttgcaccatcaggttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttcctt 607  Q
    ||||| ||| |||||||||||||||||||||| ||||||||| ||||||||||||| |||| ||| || | ||||||| || |||||||||| |||| ||    
T  20420572 atctcctttaattcgatttttccattgttgcatcatcaggtttgattctaattcctttccatctccttcaattcatttccaatgatgaatttgtttcatt 20420473  T
Q  608 ttcttcccaataatttgtttcatgcctatgcttct 642  Q
    ||||||||||||||||| ||||||| |||| ||||    
T  20420472 ttcttcccaataatttgattcatgcttatgtttct 20420438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 357 - 448
Target Start/End: Complemental strand, 9811850 - 9811759
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaac 448  Q
    |||||||||||||||||| ||||||||| ||||  ||| ||| ||||||||||||| ||||||||| |||||||||||||||| ||||||||    
T  9811850 cgcacttggttcggatgagttcggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaac 9811759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 357 - 448
Target Start/End: Complemental strand, 16579100 - 16579009
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaac 448  Q
    |||||||||||||||||| ||||||||| ||||  ||| ||| ||||||||||||| ||||||||| |||||||||||||||  ||||||||    
T  16579100 cgcacttggttcggatgagttcggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaactgaaccaaac 16579009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 357 - 448
Target Start/End: Complemental strand, 20420888 - 20420797
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaac 448  Q
    |||||||||||||||||| ||||||||| ||||  ||| ||| ||||||||||||| ||||||||| |||||||||||||| | ||||||||    
T  20420888 cgcacttggttcggatgagttcggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaatcgaaccaaac 20420797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 357 - 448
Target Start/End: Original strand, 36412910 - 36413001
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaac 448  Q
    |||||||||||||||||| ||||||||| ||||  ||| ||| | ||||||||||| ||||||||| |||||||||||||| | ||||||||    
T  36412910 cgcacttggttcggatgagttcggatgacttttagactgaaccgtgcggttcggttcggtttgcggtttgcatctcagcaatcgaaccaaac 36413001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 579 - 642
Target Start/End: Complemental strand, 18357572 - 18357509
Alignment:
Q  579 ttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    ||||||| ||||||||||||| |||| ||||||||||||||||||||||||||| |||| ||||    
T  18357572 ttcatttccagtgatgaatttgtttcattttcttcccaataatttgtttcatgcttatgtttct 18357509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 376 - 448
Target Start/End: Original strand, 42785098 - 42785170
Alignment:
Q  376 ttcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaac 448  Q
    ||||||||| ||||||| | |||  |||||||||||||||||||||| ||||||||||| |||| ||||||||    
T  42785098 ttcggatgacttttgcattgaaccacgcggttcggtttggtttgcggtttgcatctcagaaaccgaaccaaac 42785170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 182; Significance: 5e-98; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 357 - 642
Target Start/End: Original strand, 51251979 - 51252264
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaactgcaagaa 456  Q
    |||| ||||||||||||||||||||||| ||||||| | ||| |||| |||||||||||||||||| ||||||||||||||||||||||| | |||||||    
T  51251979 cgcatttggttcggatgaattcggatgacttttgcaatgaaccgcgcagttcggtttggtttgcggtttgcatctcagcaaccaaaccaacccgcaagaa 51252078  T
Q  457 taatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcgattct 556  Q
    |||||||||||||||||||||||| ||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  51252079 taatgaatattacttaaacatgtactagcctaattacatagccaaataataatctcttttgattcgatttttccattgttgcaccatcaaattcgattct 51252178  T
Q  557 aattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    ||||||| |||| |||||| | ||||||| |||| || ||||| |||| ||||||||||||||||||||||||||| |||| ||||    
T  51252179 aattcctttccatctctttcaattcatttccagttataaatttgtttcattttcttcccaataatttgtttcatgcttatgtttct 51252264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 357 - 642
Target Start/End: Original strand, 33910325 - 33910620
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaa----------ccaaaccaa 446  Q
    ||||||||||||||||||||| |||||| ||||||||| ||| ||||||||||||||||||||||| ||||||||||| ||          |||||||||    
T  33910325 cgcacttggttcggatgaatttggatgacttttgcactgaaccgcgcggttcggtttggtttgcggtttgcatctcagtaatcaaaccaaaccaaaccaa 33910424  T
Q  447 actgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcag 546  Q
    || ||||||||||||||||||||||||| ||||| ||||||||||||||| |  ||||||||||||||||||||||||||||||| ||||||||||||||    
T  33910425 accgcaagaataatgaatattacttaaatatgtactagcccaattacataacttaagaataatctcttttgattcgatttttccaatgttgcaccatcag 33910524  T
Q  547 gttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    ||||||||||||||| | |||| |||||| | |||||||  |||||||||||| |||||||| ||||||||||||||||||||||| |||| ||||    
T  33910525 gttcgattctaattcttttccatctctttcaattcatttcaagtgatgaatttgtttcctttacttcccaataatttgtttcatgcttatgtttct 33910620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 360 - 642
Target Start/End: Original strand, 39256187 - 39256479
Alignment:
Q  360 acttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaacc----------aaaccaaact 449  Q
    |||||||||||||||||| |||||| ||||||||| |||||||||||| |||| ||||||||| ||||||||||||||||          |||||||||     
T  39256187 acttggttcggatgaatttggatgacttttgcactgaactgcgcggtttggttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaacc 39256286  T
Q  450 gcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggtt 549  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||| || ||||||||| ||| |||||||||||||||||||||||||||||||||    
T  39256287 gcaagaataatgaatattacttaaacatgtactagccaaattacatagctcacgaataatctttttcgattcgatttttccattgttgcaccatcaggtt 39256386  T
Q  550 cgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    |||||||||||||| |||| |||||| | ||||||| || |||||||||| ||||||||  |||||||||||||||||||||| |||| ||||    
T  39256387 cgattctaattcctttccatctctttcaattcatttccaatgatgaatttgtttcctttatttcccaataatttgtttcatgcttatgtttct 39256479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 358 - 642
Target Start/End: Original strand, 16529041 - 16529335
Alignment:
Q  358 gcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaacc----------aaaccaaa 447  Q
    |||||||||||| |||||||||||||  ||||||||| ||| |||| ||||||||| || ||||| ||||||||||||||||          ||||||||    
T  16529041 gcacttggttcgtatgaattcggatggcttttgcactgaacagcgcagttcggtttagtatgcggtttgcatctcagcaaccaaaccaaaccaaaccaaa 16529140  T
Q  448 ctgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcagg 547  Q
    | ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  16529141 ccgcaagaatagtgaatattacttaaacatgtaatagcccaattacatagcccaagaataatctcttttgattcgaatttttcattgttgcaccatcagg 16529240  T
Q  548 ttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    |||||||||||||||| |||| |||||| | ||||||| ||| ||| ||||| |||||||||||||| ||||||||||||||||| |||| ||||    
T  16529241 ttcgattctaattcctttccatctctttcaattcatttccagggatcaatttgtttccttttcttccaaataatttgtttcatgcttatgtttct 16529335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 357 - 632
Target Start/End: Complemental strand, 44919060 - 44918790
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaactgcaagaa 456  Q
    |||||||| || |||||||||||||| | ||||||||| |||||||||||| |||||||||||||| ||||||||| ||||||| |||     |||||||    
T  44919060 cgcacttgatttggatgaattcggataacttttgcactgaactgcgcggtttggtttggtttgcggtttgcatctctgcaaccagacc-----gcaagaa 44918966  T
Q  457 taatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcgattct 556  Q
    |||||||||||||||||||||||| ||| ||||||||||||| |||||||||||| |||||||| ||||||||||||||||| |||||| ||||||||||    
T  44918965 taatgaatattacttaaacatgtactagtccaattacatagctcaagaataatcttttttgatttgatttttccattgttgctccatcaagttcgattct 44918866  T
Q  557 aattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgc 632  Q
    ||||| | |||| ||||||   ||||||| ||||||| ||||| |||||||| |||||||||||||||||||||||    
T  44918865 aattcttttccatctctttcgattcatttccagtgattaatttgtttcctttacttcccaataatttgtttcatgc 44918790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 358 - 642
Target Start/End: Complemental strand, 45692324 - 45692035
Alignment:
Q  358 gcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaa-----ctgca 452  Q
    |||||||||||||||||||| |||||| ||||||||| ||| || |||||||||| ||||||||| |||||||||||||||| |||||||     | |||    
T  45692324 gcacttggttcggatgaatttggatgacttttgcactgaaccgcacggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaaacaaaccgca 45692225  T
Q  453 agaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcga 552  Q
    |||||||| ||||||||||||| ||||| ||| ||||||||||| | |||||||||||||||||||||| |||||| |||||||||||||| ||||||||    
T  45692224 agaataataaatattacttaaatatgtactagtccaattacataactcaagaataatctcttttgattcaattttttcattgttgcaccattaggttcga 45692125  T
Q  553 ttctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    ||||||||||| |||| |||||| | ||||||| ||| ||||||||||| |||||| ||||| ||||||||| ||||||| |||| ||||    
T  45692124 ttctaattcctttccatctctttcaattcatttacagagatgaatttatatcctttacttcctaataatttgcttcatgcttatgtttct 45692035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 357 - 642
Target Start/End: Original strand, 24910602 - 24910897
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaacc----------aaaccaa 446  Q
    |||||||||||||||||||||||||||| ||||||| | ||| | || ||||||||  ||||| || ||||||||||||||||          |||||||    
T  24910602 cgcacttggttcggatgaattcggatgacttttgcattgaaccgtgcagttcggttcagtttgtggtttgcatctcagcaaccgaaccaaaccaaaccaa 24910701  T
Q  447 actgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcag 546  Q
    || | ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||    
T  24910702 accggaagaataatgaatattacttaaacatgtactagcccaattacatagctcaagaataatctctttcgattcgatttttcaattgttgcaccatcag 24910801  T
Q  547 gttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    |||||||||||||| || |||| |||| | | |||||||  |||||||||||| |||||||| ||||||||||||||||||||||| |||| ||||    
T  24910802 gttcgattctaatttctttccatctctctcaattcatttcgagtgatgaatttgtttcctttacttcccaataatttgtttcatgcttatgtttct 24910897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 376 - 642
Target Start/End: Complemental strand, 32954589 - 32954318
Alignment:
Q  376 ttcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaacc-----aaaccaaactgcaagaataatgaatattact 470  Q
    ||||||||| ||||||||||||| || |||||| ||| |||| |||| ||||||||||||||||     |||||||||   |||||||||||||||||||    
T  32954589 ttcggatgacttttgcactaaaccgcacggttccgttcggttcgcggtttgcatctcagcaaccgaaccaaaccaaaccataagaataatgaatattact 32954490  T
Q  471 taaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcgattctaattcctctccacc 570  Q
    ||||||||||  |||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||| || |||| |    
T  32954489 taaacatgtacaagcccaattacatagctcaagaataatttctttcgattcgatttttccattgttgcaccatcaggttcaattctaattactttccaac 32954390  T
Q  571 tcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    ||||| | ||||||||||||||||||||| |||||||| ||||  ||||||||||||||||| |||| ||||    
T  32954389 tctttcaattcattttcagtgatgaatttgtttcctttacttcataataatttgtttcatgcttatgtttct 32954318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 376 - 642
Target Start/End: Complemental strand, 33474956 - 33474680
Alignment:
Q  376 ttcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaacc----------aaaccaaactgcaagaataatgaata 465  Q
    ||||||||| ||||||||| ||| ||||||||||||| |||||| |  |||||||||| |||||          |||||||||||||||||||| |||||    
T  33474956 ttcggatgacttttgcactgaaccgcgcggttcggttcggtttgtgatttgcatctcatcaaccgaaccaaaccaaaccaaactgcaagaataacgaata 33474857  T
Q  466 ttacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcgattctaattcctct 565  Q
    ||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||  ||||||||||||||||||||||| |    
T  33474856 ttacttaaatatgtactagcccaattacatagctcaagaataatctcttttgatttgattttttcattgttgcgtcatcaggttcgattctaattccttt 33474757  T
Q  566 ccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    ||| |||||| | ||||||| ||||||||||||| |||||||| | ||||||||||||||||||||| |||| ||||    
T  33474756 ccatctctttcaattcatttccagtgatgaatttgtttcctttacatcccaataatttgtttcatgcttatgtttct 33474680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 482 - 642
Target Start/End: Original strand, 1160701 - 1160861
Alignment:
Q  482 tagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcgattctaattcctctccacctcttttatttc 581  Q
    ||||| ||||||||||| |||||||||||| ||| ||||| ||||||||||||||||| |||||||| |||||||||||||| |||| |||||| | |||    
T  1160701 tagccaaattacatagctcaagaataatctttttcgattcaatttttccattgttgcaacatcaggtacgattctaattcctttccatctctttcaattc 1160800  T
Q  582 attttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    |||| ||||||||| ||| ||||||||  |||||||||||||||||||||| |||| ||||    
T  1160801 atttccagtgatgattttgtttcctttatttcccaataatttgtttcatgcttatgtttct 1160861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 500 - 632
Target Start/End: Complemental strand, 29389413 - 29389281
Alignment:
Q  500 caagaataatctcttttgattcgatttttccattgttgcaccatcaggttcgattctaattcctctccacctcttttatttcattttcagtgatgaattt 599  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |  |||||| ||| |||||| ||    
T  29389413 caagaataatctcttttaattcgatttttccattgttgcaccatcaggttcgattctaattcctctccatctctttcaactcatttccagggatgaactt 29389314  T
Q  600 atttccttttcttcccaataatttgtttcatgc 632  Q
     |||| ||| |||||||||||||||||||||||    
T  29389313 gtttcttttacttcccaataatttgtttcatgc 29389281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 366 - 553
Target Start/End: Complemental strand, 11899564 - 11899367
Alignment:
Q  366 ttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaacc----------aaaccaaactgcaaga 455  Q
    ||||||||||||| ||||| ||||||||||||     | ||| |||||| ||||||| ||||||||||||||||          ||||||||| ||||||    
T  11899564 ttcggatgaattcagatgacttttgcactaaaacatacagtttggtttgatttgcggtttgcatctcagcaaccgaatcaaaccaaaccaaaccgcaaga 11899465  T
Q  456 ataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcgat 553  Q
    ||||||||||||||||||| ||||| |||| |||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||| |||||||    
T  11899464 ataatgaatattacttaaatatgtactagctcaattacatagctcaagaataatcttttttgatttgatttttccattgttgcaccatcatgttcgat 11899367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 370 - 511
Target Start/End: Original strand, 6722384 - 6722529
Alignment:
Q  370 gatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaacc-----aaaccaaactgcaagaataatgaat 464  Q
    |||||||| |||||| ||||||| | ||||  |||||||| || | ||||||| ||||||||||||||||     ||||||||| |||||| ||||||||    
T  6722384 gatgaatttggatgacttttgcattgaactttgcggttcgattcgatttgcggtttgcatctcagcaaccgaaccaaaccaaaccgcaaga-taatgaat 6722482  T
Q  465 attacttaaacatgtattagcccaattacatagcccaagaataatct 511  Q
    |||||||||||||||| |  |||||||||||||| ||||||||||||    
T  6722483 attacttaaacatgtactgacccaattacatagctcaagaataatct 6722529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 376 - 474
Target Start/End: Complemental strand, 29390194 - 29390096
Alignment:
Q  376 ttcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaactgcaagaataatgaatattacttaaa 474  Q
    ||||||||| ||||||||| ||| ||||||||||||| ||||||||| |||||||||| ||| |||| ||||| ||| ||||||| |||||||||||||    
T  29390194 ttcggatgacttttgcactgaaccgcgcggttcggttcggtttgcggtttgcatctcaacaatcaaatcaaaccgcacgaataataaatattacttaaa 29390096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 376 - 448
Target Start/End: Complemental strand, 8211731 - 8211659
Alignment:
Q  376 ttcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaac 448  Q
    ||||||||| ||||  ||| ||| ||||||||||||| ||||||||| |||||||||||||||| ||||||||    
T  8211731 ttcggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaac 8211659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 358 - 439
Target Start/End: Original strand, 1160583 - 1160663
Alignment:
Q  358 gcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaacc 439  Q
    ||||||||||| ||||||||| ||||| ||||||||| ||| || || ||||||| | ||||||| ||||||||||||||||    
T  1160583 gcacttggttcagatgaattcagatgacttttgcactgaaccgcacgattcggttcgatttgcgg-ttgcatctcagcaacc 1160663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 376 - 448
Target Start/End: Original strand, 5154965 - 5155037
Alignment:
Q  376 ttcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaac 448  Q
    ||||||||| ||||  ||| ||| || |||||||||| ||||||||| |||||||||||||||| ||||||||    
T  5154965 ttcggatgacttttagactgaaccgcacggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaac 5155037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 357 - 448
Target Start/End: Original strand, 29707695 - 29707781
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaac 448  Q
    |||||||||||||||||| ||||||||| ||||  ||| ||| || ||||||     ||||||||| |||||||||||||||| ||||||||    
T  29707695 cgcacttggttcggatgagttcggatgacttttagactgaaccgcacggttc-----ggtttgcggtttgcatctcagcaaccgaaccaaac 29707781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 376 - 448
Target Start/End: Complemental strand, 20494186 - 20494114
Alignment:
Q  376 ttcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaac 448  Q
    ||||||||| ||||  ||| ||| ||||||||||||| | ||||| | |||||||||||||||| ||||||||    
T  20494186 ttcggatgacttttagactgaaccgcgcggttcggttcgatttgctgtttgcatctcagcaaccgaaccaaac 20494114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 177; Significance: 4e-95; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 357 - 642
Target Start/End: Original strand, 35039487 - 35039782
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaacc----------aaaccaa 446  Q
    |||||||||||||||||||||||||||| |||||| || ||| |||||||| |||| ||||||||| |||||||||| |||||          |||||||    
T  35039487 cgcacttggttcggatgaattcggatgacttttgcgctgaaccgcgcggtttggttcggtttgcggtttgcatctcaacaaccaaaccaaaccaaaccaa 35039586  T
Q  447 actgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcag 546  Q
    || ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  35039587 accgcaagaataatgaatgttacttaaacatgtactagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaa 35039686  T
Q  547 gttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
     ||| |||||||||||| |||| |||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||    
T  35039687 attcaattctaattcctttccatctcttttaattcatttccagtgatgaatttgtttccttttcttcccaataatttgtttcatgcttatgtttct 35039782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 386 - 630
Target Start/End: Complemental strand, 33550828 - 33550574
Alignment:
Q  386 ttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaacc----------aaaccaaactgcaagaataatgaatattacttaaac 475  Q
    ||||||||| ||| |||||||| |||| ||||||||| ||||||||||||||||          ||||||||| ||||||||||||||||||||||||||    
T  33550828 ttttgcactgaaccgcgcggtttggttcggtttgcggtttgcatctcagcaaccgaaccgaaccaaaccaaaccgcaagaataatgaatattacttaaac 33550729  T
Q  476 atgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcgattctaattcctctccacctcttt 575  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||    
T  33550728 atgtactagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcgattctaattcctttcgatctcttt 33550629  T
Q  576 tatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcat 630  Q
    || |||||||  |||||||||||| ||||||||||||||||||||||||||||||    
T  33550628 taattcatttctagtgatgaatttgtttccttttcttcccaataatttgtttcat 33550574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 359 - 642
Target Start/End: Complemental strand, 25137675 - 25137383
Alignment:
Q  359 cacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaactg-------- 450  Q
    |||||||||||||||||||||||||| ||||||||| ||| |||||||| ||||||||| ||||  ||||||||| ||||| ||||||||||            
T  25137675 cacttggttcggatgaattcggatgacttttgcactgaaccgcgcggtttggtttggtt-gcggtatgcatctcatcaaccgaaccaaactgaaccaaac 25137577  T
Q  451 --caagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggt 548  Q
      ||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||    
T  25137576 cacaataataatgaatattacttaaacatgtactatcccaattacatagcccaagaataatctcttttgattcgattttttcaatattgcaccatcaggt 25137477  T
Q  549 tcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    || |||||||||| | |||  |||||| | ||||||| ||||||||||||| |||||||||||| ||||||||||||||||||| |||| ||||    
T  25137476 tcaattctaattcatttccttctctttcaattcatttccagtgatgaatttgtttccttttctttccaataatttgtttcatgcttatgtttct 25137383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 436 - 642
Target Start/End: Original strand, 13801615 - 13801821
Alignment:
Q  436 aaccaaaccaaactgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgt 535  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  13801615 aaccaaaccaaaccgcaagaataatgaatattacttaaatatgtactagcccaattacatagctcaagaataatctcttttgattcaatttttccattgt 13801714  T
Q  536 tgcaccatcaggttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgccta 635  Q
    |||||||||||||||||||||||||||| | || |||||| | ||||||| || |||||||||| |||||||| |||||||||||||| |||||||| ||    
T  13801715 tgcaccatcaggttcgattctaattccttttcatctctttcaattcatttccactgatgaatttgtttcctttacttcccaataatttatttcatgctta 13801814  T
Q  636 tgcttct 642  Q
    || ||||    
T  13801815 tgtttct 13801821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 436 - 642
Target Start/End: Complemental strand, 15860172 - 15859967
Alignment:
Q  436 aaccaaaccaaactgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgt 535  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||| || |||||||||||    
T  15860172 aaccaaaccaaactgcaagaataatgaatattaattaaacatgtactagcccaattacatagctcaagaataatctcttttgattaga-ttttccattgt 15860074  T
Q  536 tgcaccatcaggttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgccta 635  Q
    ||||||||||| | |||||||||||| | || | |||||| | |||||||| |||||||||||| |||||||| |||| |||||||||||||||||| ||    
T  15860073 tgcaccatcagttccgattctaattcttttctatctctttcaattcatttttagtgatgaatttgtttcctttacttctcaataatttgtttcatgctta 15859974  T
Q  636 tgcttct 642  Q
    || ||||    
T  15859973 tgtttct 15859967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 376 - 631
Target Start/End: Complemental strand, 10591353 - 10591099
Alignment:
Q  376 ttcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaac-----caaaccaaactg-----caagaataatgaata 465  Q
    ||||||||| ||||||||| ||| |||||||||| || ||||||||| |||| ||||| ||||     ||||||||||||     |||||||||||||||    
T  10591353 ttcggatgacttttgcactgaaccgcgcggttcgattcggtttgcggtttgcgtctcaacaacagaaccaaaccaaactgaaccgcaagaataatgaata 10591254  T
Q  466 ttacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcgattctaattcctct 565  Q
    ||||||||||||||| ||||||||||||||||| |||||||||| ||||| |||||||||||| |||||||| ||||||||||||||||||||||| | |    
T  10591253 ttacttaaacatgtaatagcccaattacatagctcaagaataatgtctttcgattcgattttttcattgttgtaccatcaggttcgattctaattcattt 10591154  T
Q  566 ccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatg 631  Q
    ||| |||           |||||||||| ||||| |||| ||| ||||||||||||||||||||||    
T  10591153 ccatctc-----------tttcagtgattaatttgtttcttttacttcccaataatttgtttcatg 10591099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 357 - 630
Target Start/End: Original strand, 10390589 - 10390858
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaacc----------aaaccaa 446  Q
    ||||||||||||||||||||||  |||| ||||||||| ||| ||||||||||||| | ||||||| ||||||||||||||||          |||||||    
T  10390589 cgcacttggttcggatgaattcaaatgacttttgcactgaaccgcgcggttcggttcgatttgcggtttgcatctcagcaaccgaaccaaaccaaaccaa 10390688  T
Q  447 actgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaa-gaataatctcttttgattcgatttttccattgttgcaccatca 545  Q
    || |||||||||||||||| ||               ||| |||||| |||| ||| ||||||||| ||| ||||| |||||||||||||||||||||||    
T  10390689 accgcaagaataatgaatagta---------------gccaaattacgtagctcaaagaataatctttttcgattcaatttttccattgttgcaccatca 10390773  T
Q  546 ggttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcat 630  Q
    | ||||||| |||||||| |||| |||||| | ||||||| ||||||||||||| ||||||||  ||| ||||||||||||||||    
T  10390774 gattcgattttaattcctttccatctctttcaattcatttccagtgatgaatttgtttcctttatttctcaataatttgtttcat 10390858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 357 - 448
Target Start/End: Complemental strand, 12271016 - 12270925
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaac 448  Q
    |||||||||||||||||| ||||||||| ||||  ||| ||| ||||||||||||| ||||||||| |||||||||||||||| ||||||||    
T  12271016 cgcacttggttcggatgagttcggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaac 12270925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 357 - 448
Target Start/End: Original strand, 5866631 - 5866722
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaac 448  Q
    |||||||||||||||||| ||||||||  ||||  ||| ||| ||||||||||||| ||||||||| |||||||||||||||| ||||||||    
T  5866631 cgcacttggttcggatgagttcggatgtcttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaac 5866722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 357 - 448
Target Start/End: Original strand, 10493940 - 10494031
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaac 448  Q
    |||||||||||||||| |||| | |||| ||||||||| ||| | |  ||||| || ||||||| | ||||||||||||||| |||||||||    
T  10493940 cgcacttggttcggataaatttgaatgacttttgcactgaaccgtgtagttcgattcggtttgcagtttgcatctcagcaactaaaccaaac 10494031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 357 - 390
Target Start/End: Original strand, 13801531 - 13801564
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttg 390  Q
    |||||||||||||||||||||||||||| |||||    
T  13801531 cgcacttggttcggatgaattcggatgacttttg 13801564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 174; Significance: 3e-93; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 357 - 631
Target Start/End: Original strand, 2226432 - 2226716
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaacc----------aaaccaa 446  Q
    |||||||||||||||||||||||||||| ||||||||| ||| ||||||||| ||| ||||||||| ||||||||||||||||          |||||||    
T  2226432 cgcacttggttcggatgaattcggatgacttttgcacttaaccgcgcggttcagttcggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaa 2226531  T
Q  447 actgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcag 546  Q
    || || |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  2226532 accgccagaataatgaatattacttaaacatgtattagcccaattacatagctcatgaataatctcttttgattcgatttttccattgttgcaccatcag 2226631  T
Q  547 gttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatg 631  Q
    ||||||||||||||||| |||| |||||| | ||||||| | ||||||||| | |||||||| ||||||||||||||||||||||    
T  2226632 gttcgattctaattcctttccatctctttcaattcatttcctgtgatgaatatgtttcctttacttcccaataatttgtttcatg 2226716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 357 - 642
Target Start/End: Original strand, 12680624 - 12680919
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaacc----------aaaccaa 446  Q
    |||||||||||| ||||||||||||||| ||||||| | ||| |||||||| |||||||||||||| ||||||||||||||||          |||||||    
T  12680624 cgcacttggttcagatgaattcggatgacttttgcaatgaaccgcgcggtttggtttggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaa 12680723  T
Q  447 actgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcag 546  Q
    || |||||||| |||||||||||||||||||||| ||||||||||||||| |  || |||||||||||||||||||||||||||||||||||||||||||    
T  12680724 accgcaagaatgatgaatattacttaaacatgtactagcccaattacataacttaaaaataatctcttttgattcgatttttccattgttgcaccatcag 12680823  T
Q  547 gttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    ||||||||||||||||| |||| |||||| | |||||||  |||||||||||| |||||||| |||  |||||||||||||||||| |||| ||||    
T  12680824 gttcgattctaattcctttccatctctttcaattcatttcaagtgatgaatttgtttcctttacttttcaataatttgtttcatgcttatgtttct 12680919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 357 - 642
Target Start/End: Original strand, 32520774 - 32521064
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaacc-----aaaccaaactgc 451  Q
    |||||||||||||||||||||||||||| ||||||| | ||| ||||||||||||||||||||||   |||||||||||||||     ||||||||| ||    
T  32520774 cgcacttggttcggatgaattcggatgacttttgcaatgaaccgcgcggttcggtttggtttgcgatctgcatctcagcaaccgaaccaaaccaaaccgc 32520873  T
Q  452 aagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcg 551  Q
    |||||| |||||||||||||||| ||||| |||||||||||||||    |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  32520874 aagaatgatgaatattacttaaagatgtactagcccaattacataatttaagaataatctcttttgattcgattttttcattgttgcaccatcaggttcg 32520973  T
Q  552 attctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    |||||| ||| | |||| |||||| | |||||||  |||||||||||| |||| ||| ||||||||||||||||||||||| |||| ||||    
T  32520974 attctagttcatttccatctctttcaattcatttcaagtgatgaatttgtttcttttacttcccaataatttgtttcatgcttatgtttct 32521064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 359 - 642
Target Start/End: Original strand, 36103162 - 36103455
Alignment:
Q  359 cacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaacc----------aaaccaaac 448  Q
    |||||||||||||||||||| ||||| ||||||||| ||| |||||||||| |||||||||  | ||||||||||||||||          |||||||||    
T  36103162 cacttggttcggatgaattcagatgacttttgcactgaaccgcgcggttcgttttggtttgtagtttgcatctcagcaaccgaaccaaaccaaaccaaac 36103261  T
Q  449 tgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggt 548  Q
     |||||||||||||||||||||| |||||||| |||||||| |||||||| |||||||||||  ||||||||||||||||||||||||||||||||| ||    
T  36103262 cgcaagaataatgaatattacttgaacatgtactagcccaactacatagctcaagaataatcgtttttgattcgatttttccattgttgcaccatcaagt 36103361  T
Q  549 tcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    ||||||||||||||| |||| |||||| | ||||||| ||||||||||||| |||| ||| ||| |||||||||||||| |||| |||| ||||    
T  36103362 tcgattctaattcctttccatctctttcaattcatttacagtgatgaatttgtttcatttactttccaataatttgtttgatgcttatgtttct 36103455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 360 - 642
Target Start/End: Complemental strand, 9161511 - 9161221
Alignment:
Q  360 acttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaact---------- 449  Q
    ||||||||||||||||||| ||||| ||||||||| ||| | ||||||||||| ||||||||| ||| |||||||||||| ||||||||               
T  9161511 acttggttcggatgaattcagatgacttttgcactgaaccgtgcggttcggttcggtttgcggtttgaatctcagcaaccgaaccaaaccaaacccaacc 9161412  T
Q  450 gcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggtt 549  Q
    ||||||||||||||||||||||||| ||| | ||||||||  ||||||| ||  |||||||||||||||||||||||||||||||||||||||||| |||    
T  9161411 gcaagaataatgaatattacttaaatatgcactagcccaa--acatagctcagaaataatctcttttgattcgatttttccattgttgcaccatcaagtt 9161314  T
Q  550 cgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    | |||||||||||| |||| |||||| | ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||    
T  9161313 caattctaattcctttccatctctttgaattcatttccagtgatgaatttatttcctttacttcccaataatttgtttcatgcttatgtttct 9161221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 357 - 642
Target Start/End: Complemental strand, 38434219 - 38433924
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaacc----------aaaccaa 446  Q
    |||||||||||  |||||||| |||||| ||||||||| ||| | | ||||||||||| ||||||| ||| ||||||||||||          |||||||    
T  38434219 cgcacttggtttagatgaatttggatgacttttgcactgaaccgtgaggttcggtttgatttgcggtttgtatctcagcaaccgaaccaaaccaaaccaa 38434120  T
Q  447 actgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcag 546  Q
    || ||||||||||  |||||||||||||| |||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||     
T  38434119 accgcaagaataagaaatattacttaaacttgtactagcccaattacatagcctaagaataatctcttttaattcgatttttccattgttgcaccatcac 38434020  T
Q  547 gttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    ||||||||||||||| | | || ||| |||| ||||||| || |||||||||||||| ||||||||||||||||||||||||| || |||| ||||    
T  38434019 gttcgattctaattctttttcatctcctttaattcatttccaatgatgaatttattttcttttcttcccaataatttgtttcacgcttatgtttct 38433924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 357 - 628
Target Start/End: Original strand, 12165492 - 12165773
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaacc----------aaaccaa 446  Q
    |||||||||||||||||||||||||||| ||||||||| ||| ||  ||||||||| ||||||| | |||||||||||||||           |||||||    
T  12165492 cgcacttggttcggatgaattcggatgacttttgcactgaaccgcatggttcggttcggtttgcagtttgcatctcagcaactgaaccaaacgaaaccaa 12165591  T
Q  447 actgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcag 546  Q
    || ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||    
T  12165592 accgcaagaataatgaatattacttaaacatgtactagcccaattacatagctcaagaataatctctttcgattcgatctttccattgttgcaccatcag 12165691  T
Q  547 gttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttc 628  Q
    |||| ||| |||||||| | || ||||||   || |||| ||||||||||||| |||||||| |||  ||||||||||||||    
T  12165692 gttcaattttaattccttttcatctctttcgatttatttccagtgatgaatttgtttcctttacttgtcaataatttgtttc 12165773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 376 - 642
Target Start/End: Original strand, 332849 - 333127
Alignment:
Q  376 ttcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagca-----accaaaccaaact-----gcaagaataatgaata 465  Q
    |||||| || ||||||||| ||| |||| |||||||||||||||||| |||||||||||||     |||||||||||||     ||||||||||||||||    
T  332849 ttcggacgacttttgcactgaaccgcgcagttcggtttggtttgcggtttgcatctcagcatccgaaccaaaccaaactaaaccgcaagaataatgaata 332948  T
Q  466 ttacttaaacatgtattagcccaattacata--gcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcgattctaattcct 563  Q
    ||||||||||||||| | |||||||||||||  || |||||||||||| ||||||||||||||||||||  ||||||||||| |||||||||||||||||    
T  332949 ttacttaaacatgtactggcccaattacatatagctcaagaataatctattttgattcgatttttccataattgcaccatcaagttcgattctaattcct 333048  T
Q  564 ctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
     || | |||||| | ||||||| | |||||||||||||||| ||| ||||||||||||||||||||||| |||| ||||    
T  333049 ttctatctctttcaattcatttcccgtgatgaatttatttcttttacttcccaataatttgtttcatgcttatgtttct 333127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 357 - 632
Target Start/End: Original strand, 30265347 - 30265626
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaacc----------aaaccaa 446  Q
    |||||||| ||||||||||||| ||||| ||||||||||||| |  ||||||||||||     ||| ||||||||||||||||          |||||||    
T  30265347 cgcacttgattcggatgaattcagatgacttttgcactaaaccgtacggttcggtttg-----cggtttgcatctcagcaaccgaaccaaatcaaaccaa 30265441  T
Q  447 actgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcag 546  Q
    |  |||||||||||||||||||||||| |||||  ||||||||||||||||| ||| ||||| | ||||  ||||||||||||||||||||||||||||     
T  30265442 atcgcaagaataatgaatattacttaatcatgtgctagcccaattacatagctcaaaaataa-cgctttcaattcgatttttccattgttgcaccatcaa 30265540  T
Q  547 gttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgc 632  Q
    ||||||||||||||  | |||| |||||| | ||||||| ||||||||||||| |||||||| |||||||||||||||||||||||    
T  30265541 gttcgattctaattattttccatctctttcaattcatttccagtgatgaatttgtttcctttacttcccaataatttgtttcatgc 30265626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 358 - 642
Target Start/End: Original strand, 17084436 - 17084719
Alignment:
Q  358 gcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaactgcaagaat 457  Q
    ||||||| ||||||||||||| ||||| | ||||| | ||| ||||  ||||||| | ||| | | |||||||||||||||| |||||||| ||||||||    
T  17084436 gcacttgattcggatgaattcagatgactgttgcattgaaccgcgca-ttcggttcgatttccagtttgcatctcagcaaccgaaccaaaccgcaagaat 17084534  T
Q  458 aatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcgattcta 557  Q
    ||| |||||||||||||| |||| || ||||||||||||  |||| |||||||| ||||||||||||||||||||| ||||||||||| |||||| ||||    
T  17084535 aatcaatattacttaaacttgtactaacccaattacataatccaaaaataatctattttgattcgatttttccattattgcaccatcaagttcgaatcta 17084634  T
Q  558 attcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
     ||  | | || ||| || | |  |||||||||||||||||| ||||||||||| ||||||||||| ||||| || |||| ||||    
T  17084635 tttgtttttcatctccttcaatcaattttcagtgatgaatttgtttccttttctccccaataatttatttcacgcttatgtttct 17084719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 462 - 628
Target Start/End: Complemental strand, 35893405 - 35893238
Alignment:
Q  462 aatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcgattctaattc 561  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||| ||||||| |||||||||||||||| | |||||||||||||    
T  35893405 aatattacttaaacatgtactagcccaattacatagctcaagaataatctctttcgatttgattttttcattgttgcaccatcacgctcgattctaattc 35893306  T
Q  562 c-tctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttc 628  Q
    | | |||| || ||| | ||||||| ||||||||||||| |||||||| |||||||||||||||||||    
T  35893305 cttttccatctttttcaattcatttccagtgatgaatttgtttcctttacttcccaataatttgtttc 35893238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 357 - 525
Target Start/End: Original strand, 36176438 - 36176616
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaacc----------aaaccaa 446  Q
    ||||||||||||| |||||||||||||| ||||||||||||| ||  ||||||| ||||||||||| ||||||||||||||||          |||||||    
T  36176438 cgcacttggttcgaatgaattcggatgacttttgcactaaaccgcatggttcgggttggtttgcggtttgcatctcagcaaccgaaccaaatcaaaccaa 36176537  T
Q  447 actgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatt 525  Q
    || ||||||||||||| |||||||||||| |||| ||||||||||||||||| |||||| |||||||||||||||||||    
T  36176538 accgcaagaataatgactattacttaaacgtgtactagcccaattacatagctcaagaaaaatctcttttgattcgatt 36176616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 357 - 561
Target Start/End: Complemental strand, 10174588 - 10174382
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaactg---caa 453  Q
    |||||||| ||||||||||||||||||| ||||||||| ||| |||||||| | || | ||||||| |||||||||||||||| ||||||||     |||    
T  10174588 cgcacttgattcggatgaattcggatgacttttgcactgaaccgcgcggtttg-ttcgatttgcggtttgcatctcagcaaccgaaccaaaccaaaccaa 10174490  T
Q  454 ---gaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttc 550  Q
       | | ||||||||||||||||||||||| || |||||||||||| | |||||||   ||||||||||||||||||| |||||||||||||||||||||    
T  10174489 accgcaaaatgaatattacttaaacatgtactatcccaattacataactcaagaat---ctcttttgattcgattttttcattgttgcaccatcaggttc 10174393  T
Q  551 gattctaattc 561  Q
    |||| ||||||    
T  10174392 gattataattc 10174382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 485 - 642
Target Start/End: Complemental strand, 23781124 - 23780972
Alignment:
Q  485 cccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcgattctaattcctctccacctcttttatttcatt 584  Q
    ||||||||| |||| ||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||| |||| |||||| | ||||||    
T  23781124 cccaattacttagctcaagaataatctcttttgatttgatttttccattgttgtaccatcgggttcgattctaattcctttccatctctttcaattcatt 23781025  T
Q  585 ttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    | |     ||||||| |||||||| ||||||||||||||||||||||| |||| ||||    
T  23781024 tcc-----tgaatttgtttcctttacttcccaataatttgtttcatgcttatgtttct 23780972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 485 - 642
Target Start/End: Complemental strand, 23868077 - 23867925
Alignment:
Q  485 cccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcgattctaattcctctccacctcttttatttcatt 584  Q
    ||||||||| |||| ||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||| |||| |||||| | ||||||    
T  23868077 cccaattacttagctcaagaataatctcttttgatttgatttttccattgttgtaccatcgggttcgattctaattcctttccatctctttcaattcatt 23867978  T
Q  585 ttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    | |     ||||||| |||||||| ||||||||||||||||||||||| |||| ||||    
T  23867977 tcc-----tgaatttgtttcctttacttcccaataatttgtttcatgcttatgtttct 23867925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 357 - 632
Target Start/End: Original strand, 36176669 - 36176934
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaac----------caaaccaa 446  Q
    ||||||||||||| |||||||||||||| ||||||||||||| ||  ||||||| ||||||||||| |||||||||||||||          ||||||||    
T  36176669 cgcacttggttcgaatgaattcggatgacttttgcactaaaccgcatggttcgggttggtttgcggtttgcatctcagcaaccgaaccaaatcaaaccaa 36176768  T
Q  447 actgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcag 546  Q
    || ||||||||||||| |||||||||||| |||| ||||||||||||||||| |||||| |||                    || ||||||||||||||    
T  36176769 accgcaagaataatgactattacttaaacgtgtactagcccaattacatagctcaagaaaaat--------------------cactgttgcaccatcag 36176848  T
Q  547 gttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgc 632  Q
    |||| |||||||||||| |||| ||||||   ||||||| || |||||||||| |||||||| ||| ||||||||| |||||||||    
T  36176849 gttcaattctaattcctttccatctctttcgattcatttccaatgatgaatttgtttcctttactttccaataattagtttcatgc 36176934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 450 - 632
Target Start/End: Complemental strand, 42545086 - 42544902
Alignment:
Q  450 gcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggtt 549  Q
    ||||||||||||||||||||||||| ||||| ||||||||| ||||||| ||||||||||||  |||||||| | || | |||||||||||||| ||| |    
T  42545086 gcaagaataatgaatattacttaaatatgtaatagcccaataacatagctcaagaataatctaatttgattcaacttgttcattgttgcaccataaggct 42544987  T
Q  550 cgattctaattcctctccacctctttta--tttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgc 632  Q
     |||| |||||| | |||| |||||| |   ||||||| ||||||||||||| |||||||| |||| ||||||||| ||||||||    
T  42544986 tgattttaattcttttccatctctttcaatattcatttccagtgatgaatttgtttcctttacttctcaataatttatttcatgc 42544902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 508 - 642
Target Start/End: Original strand, 38334674 - 38334808
Alignment:
Q  508 atctcttttgattcgatttttccattgttgcaccatcaggttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttcctt 607  Q
    ||||| ||| |||||||||| ||||||||||| ||||||||||||||||||||||| |||| ||| || | ||||||| || |||||||||| |||| ||    
T  38334674 atctcctttaattcgattttcccattgttgcatcatcaggttcgattctaattcctttccatctccttcaattcatttccaatgatgaatttgtttcatt 38334773  T
Q  608 ttcttcccaataatttgtttcatgcctatgcttct 642  Q
    ||||||||||||||||| ||||||| |||| ||||    
T  38334774 ttcttcccaataatttgattcatgcttatgtttct 38334808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 495 - 631
Target Start/End: Original strand, 9988586 - 9988722
Alignment:
Q  495 tagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcgattctaattcctctccacctcttttatttcattttcagtgatg 594  Q
    ||||||||||| ||||||||||||||| |||||| |||| |||||||||||| ||||||| |||||||| | || ||| || | |||||||  |||||||    
T  9988586 tagcccaagaacaatctcttttgattcaattttttcattcttgcaccatcagattcgattttaattccttttcatctccttcaattcatttctagtgatg 9988685  T
Q  595 aatttatttccttttcttcccaataatttgtttcatg 631  Q
    ||||| |||||||||||| | ||||||||||||||||    
T  9988686 aatttgtttccttttctttcaaataatttgtttcatg 9988722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 358 - 457
Target Start/End: Complemental strand, 42545914 - 42545815
Alignment:
Q  358 gcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaactgcaagaat 457  Q
    ||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||| ||||||||| |||||||||| ||||| ||||||||  |||||||    
T  42545914 gcacttggttcggatgaattcagatgacttttgcactaaaccgcgcggttcggttcggtttgcggtttgcatctcaacaaccgaaccaaaccacaagaat 42545815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 357 - 449
Target Start/End: Original strand, 38334364 - 38334456
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaact 449  Q
    |||||||||||||||||| ||||||||| ||||  ||| ||| ||||||||||||| ||||||||| |||||||||||||||| |||||||||    
T  38334364 cgcacttggttcggatgagttcggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaact 38334456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 357 - 448
Target Start/End: Original strand, 666881 - 666972
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaac 448  Q
    |||||||||||||||||| ||||||||| ||||  ||| ||| ||||||||||||| ||||||||| |||||||||||||||| ||||||||    
T  666881 cgcacttggttcggatgagttcggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaac 666972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 357 - 448
Target Start/End: Complemental strand, 11917915 - 11917824
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaac 448  Q
    ||||||||||| |||||| ||||||||| ||||  ||||||| ||||||||||||| ||||||||| |||||||||||||||| ||||||||    
T  11917915 cgcacttggtttggatgagttcggatgacttttagactaaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaac 11917824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 357 - 448
Target Start/End: Complemental strand, 15068936 - 15068845
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaac 448  Q
    |||||||||||||||||| ||||||||| ||||  ||| ||| ||||||||||||| ||||||||| |||||||||| ||||||||||||||    
T  15068936 cgcacttggttcggatgagttcggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcaacaaccaaaccaaac 15068845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 357 - 448
Target Start/End: Original strand, 27885696 - 27885787
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaac 448  Q
    |||||||||||||||||| ||||||||| ||||  ||| ||| ||||||||||||| ||||||||| |||||||||||||||| ||||||||    
T  27885696 cgcacttggttcggatgagttcggatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaac 27885787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 357 - 448
Target Start/End: Complemental strand, 30002458 - 30002367
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaac 448  Q
    |||||||||||||||||| ||||||||||||||  ||| ||| ||||||||||||| ||||||||| || ||||||||||||| ||||||||    
T  30002458 cgcacttggttcggatgagttcggatgatttttagactgaaccgcgcggttcggttcggtttgcggtttacatctcagcaaccgaaccaaac 30002367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 357 - 448
Target Start/End: Complemental strand, 701677 - 701586
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaac 448  Q
    |||||||||||||||||| || |||||| ||||  ||||||| || |||||||||| ||||||||| |||||||||||||||| ||||||||    
T  701677 cgcacttggttcggatgagtttggatgacttttagactaaaccgcacggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaac 701586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 357 - 448
Target Start/End: Complemental strand, 8409446 - 8409355
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaac 448  Q
    |||||||||||||||||| ||||||||| ||||  ||| ||  ||||||||||||| ||||||||| |||||||||||||||| ||||||||    
T  8409446 cgcacttggttcggatgagttcggatgacttttagactgaatcgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaac 8409355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 357 - 459
Target Start/End: Complemental strand, 35359551 - 35359454
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaactgcaagaa 456  Q
    |||||||||| ||||||||||||||||||||||||||| ||| | |||||||     | ||||||| ||||||||||  ||||||||||||| |||||||    
T  35359551 cgcacttggtgcggatgaattcggatgatttttgcactgaacagtgcggttc-----gatttgcggtttgcatctcaaaaaccaaaccaaaccgcaagaa 35359457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 357 - 420
Target Start/End: Complemental strand, 23781238 - 23781175
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgc 420  Q
    ||||||||| |||||||| ||| ||||| ||||||||| ||||||||||||||||| |||||||    
T  23781238 cgcacttggatcggatgatttcagatgacttttgcactgaactgcgcggttcggttcggtttgc 23781175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 357 - 420
Target Start/End: Complemental strand, 23868191 - 23868128
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgc 420  Q
    ||||||||| |||||||| ||| ||||| ||||||||| ||||||||||||||||| |||||||    
T  23868191 cgcacttggatcggatgatttcagatgacttttgcactgaactgcgcggttcggttcggtttgc 23868128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 595 - 642
Target Start/End: Complemental strand, 35893247 - 35893200
Alignment:
Q  595 aatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    ||||| |||||||| ||||||||||||||||||||||| |||| ||||    
T  35893247 aatttgtttcctttacttcccaataatttgtttcatgcttatgtttct 35893200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 412
Target Start/End: Complemental strand, 35893548 - 35893493
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtt 412  Q
    |||||||||||||||||||||||||||| ||||| ||| ||  ||||||| |||||    
T  35893548 cgcacttggttcggatgaattcggatgacttttgtactgaatcgcgcggtccggtt 35893493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 172; Significance: 4e-92; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 357 - 630
Target Start/End: Complemental strand, 14549757 - 14549478
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagca-----accaaaccaaactgc 451  Q
    |||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||| ||||||||| |||||||||||||     |||||||||||| |     
T  14549757 cgcacttggttcggatgaattcggatgacttttgcactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcatccgaaccaaaccaaaccgt 14549658  T
Q  452 aagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcg 551  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  14549657 aagaataatgaatattacttaaacatgtactagcccaattacatagctcaagaataatctcttttgattcgaattttccattgttgtaccatcaggttcg 14549558  T
Q  552 attctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttccc-aataatttgtttcat 630  Q
    |||||| ||||| |||| |||||| | || |||||||||||||||||| |||||||| |||||| ||||| |||||||||    
T  14549557 attctatttcctttccatctctttcaattaattttcagtgatgaatttgtttcctttacttcccaaataaattgtttcat 14549478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 357 - 642
Target Start/End: Original strand, 18169581 - 18169870
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagc-----aaccaaaccaaactgc 451  Q
    |||| ||||||||||||| ||||||| | ||||||||| ||| ||| ||||||||||||||||||| ||||||||| ||     ||||||| ||||||||    
T  18169581 cgcagttggttcggatga-ttcggattacttttgcactgaaccgcgtggttcggtttggtttgcggtttgcatctcggcagccgaaccaaatcaaactgc 18169679  T
Q  452 aagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcg 551  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||| | ||||||||||||||||| ||||||||||||||| |    
T  18169680 aagaataatgaatattacttaaacatgtactagcccaattacatacctcaagaataatctctatcgattcgatttttccattattgcaccatcaggtttg 18169779  T
Q  552 attctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    |||||||||||| |||| |||||| | ||||||| ||||||||||||| |||||||| ||| | ||||||||||||||||| |||| ||||    
T  18169780 attctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcctttacttgcaaataatttgtttcatgcttatgtttct 18169870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 357 - 642
Target Start/End: Original strand, 18633147 - 18633436
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagc-----aaccaaaccaaactgc 451  Q
    |||| ||||||||||||| ||||||| | ||||||||| ||| ||| ||||||||||||||||||| ||||||||| ||     ||||||| ||||||||    
T  18633147 cgcagttggttcggatga-ttcggattacttttgcactgaaccgcgtggttcggtttggtttgcggtttgcatctcggcagccgaaccaaatcaaactgc 18633245  T
Q  452 aagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcg 551  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||| | ||||||||||||||||| ||||||||||||||| |    
T  18633246 aagaataatgaatattacttaaacatgtactagcccaattacatacctcaagaataatctctatcgattcgatttttccattattgcaccatcaggtttg 18633345  T
Q  552 attctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    |||||||||||| |||| |||||| | ||||||| ||||||||||||| |||||||| ||| | ||||||||||||||||| |||| ||||    
T  18633346 attctaattcctttccatctctttcaattcatttccagtgatgaatttgtttcctttacttgcaaataatttgtttcatgcttatgtttct 18633436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 357 - 642
Target Start/End: Complemental strand, 30392613 - 30392319
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaacc----------aaaccaa 446  Q
    ||||||||||| |||||||||||||||| ||||  ||| ||| |||||||| ||||  |||||||| ||| |||||| |||||          |||||||    
T  30392613 cgcacttggtttggatgaattcggatgacttttttactgaaccgcgcggtttggttcagtttgcggtttgtatctcaacaaccgaaccaaaccaaaccaa 30392514  T
Q  447 actgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcag 546  Q
    || ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| || ||    
T  30392513 accgcaagaataatgaatattacttaaacatgtactagcccaattacatagcccaacaataatctcttttgattcgatttttccattgctgcactatgag 30392414  T
Q  547 gttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    ||| ||||||||||||| |||| |||||||| ||||||| ||||||||||||| |||||||||||| ||||||||||||||||||| |||| ||||    
T  30392413 gtttgattctaattcctttccatctcttttaattcatttccagtgatgaatttgtttccttttctt-ccaataatttgtttcatgcttatgattct 30392319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 357 - 642
Target Start/End: Original strand, 36827341 - 36827636
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagca----------accaaaccaa 446  Q
    |||||||||||||| |||||||| |||| ||||||||| |||  | ||||| |||| ||||||||| |||||||||||||          ||||||||||    
T  36827341 cgcacttggttcggctgaattcgaatgacttttgcactgaaccacacggtttggttcggtttgcggtttgcatctcagcagccgaaccaaaccaaaccaa 36827440  T
Q  447 actgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcag 546  Q
    || ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||| ||||| ||||||||||||||||||||||||    
T  36827441 accgcaagaataatgaatattacttaaacatgtactagcccaattacatagctcaagattaatctctttcgattcaatttttccattgttgcaccatcag 36827540  T
Q  547 gttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    |||||||||||||| || |||| |||||| | || |||| ||  ||||||||| |||| ||| ||||||||||||||||||||||| |||| ||||    
T  36827541 gttcgattctaatttctttccatctctttcaatttatttccaccgatgaatttgtttcttttacttcccaataatttgtttcatgcttatgtttct 36827636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 357 - 631
Target Start/End: Complemental strand, 3682447 - 3682169
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaacc-----aaaccaaactgc 451  Q
    ||||||||||||  ||||| |||||||| |||| |||| ||| |||||||| |||||||||||||| ||||||||||||||||     ||||||||| ||    
T  3682447 cgcacttggttcaaatgaaatcggatgacttttccactgaaccgcgcggtttggtttggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccgc 3682348  T
Q  452 aagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcg 551  Q
    |||||||||||||||||| |||||||||| ||||||||||||||| || ||||||||||||||||||||| ||||||||||| || |||||||||||||     
T  3682347 aagaataatgaatattacctaaacatgtactagcccaattacataacctaagaataatctcttttgattcaatttttccatttttccaccatcaggttca 3682248  T
Q  552 attctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatg 631  Q
    ||||||||| ||  ||| || ||| | |||| || || ||| |||||| |||| ||||||||||||||| ||||||||||    
T  3682247 attctaatttcttaccatctatttcaattca-ttccactgacgaatttgtttcattttcttcccaataacttgtttcatg 3682169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 358 - 631
Target Start/End: Original strand, 36909898 - 36910165
Alignment:
Q  358 gcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaacca-----aactgca 452  Q
    |||||| |||||||||||||  || || ||||||| | ||||||||||||||||| ||||||||| ||||||||||| |||| |||||     ||| |||    
T  36909898 gcacttagttcggatgaatttagacgacttttgcattgaactgcgcggttcggttcggtttgcggtttgcatctcaggaaccgaaccataccaaaccgca 36909997  T
Q  453 agaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcga 552  Q
    ||||||||||||||         ||||| |||||||||||||| || |||||||||||| ||||||||| ||||||||||||||||||||||||||| ||    
T  36909998 agaataatgaatat---------atgtactagcccaattacat-gctcaagaataatct-ttttgattccatttttccattgttgcaccatcaggtttga 36910086  T
Q  553 ttctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatg 631  Q
    ||||||||| | |||| |||||| | ||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  36910087 ttctaattcatttccatctctttcaattcattttcggtgatgaatttatttcctttacttcccaataatttgtttcatg 36910165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 436 - 642
Target Start/End: Complemental strand, 10661593 - 10661387
Alignment:
Q  436 aaccaaaccaaactgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgt 535  Q
    ||||||||||||| ||||| |||||||||||  |||||||||||| |||||| |||||||||| ||||||| |||| |||||||||||||||| ||||||    
T  10661593 aaccaaaccaaaccgcaaggataatgaatatatcttaaacatgtactagcccgattacatagctcaagaattatcttttttgattcgattttttcattgt 10661494  T
Q  536 tgcaccatcaggttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgccta 635  Q
    || ||||||| ||||||||||||||| | |||| |||||| | ||||||| |||||| |||||| |||||||| ||||||||||||||||||||||| ||    
T  10661493 tgtaccatcatgttcgattctaattcatttccaactctttcaattcatttccagtgaagaatttgtttcctttacttcccaataatttgtttcatgctta 10661394  T
Q  636 tgcttct 642  Q
    || ||||    
T  10661393 tgtttct 10661387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 357 - 629
Target Start/End: Complemental strand, 33069121 - 33068844
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaacc----------aaaccaa 446  Q
    ||||||||||| |||||| ||||||||| ||||||||| |||  |||||||     || ||||||| |||||||| |||||||          |||||||    
T  33069121 cgcacttggtttggatgatttcggatgacttttgcactgaaccacgcggtt-----tgatttgcggtttgcatcttagcaaccgaaccaaacgaaaccaa 33069027  T
Q  447 actgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcag 546  Q
    ||  ||| |||||| |||||||||||||  ||||  |||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||     
T  33069026 accacaaaaataatcaatattacttaaatttgtaccagcccaattacataactcaagaataatctcttttgatttgatttttccattgttgcaccatcaa 33068927  T
Q  547 gttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttca 629  Q
     |||||||||||||||| | ||  || || | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33068926 attcgattctaattccttttcatttccttcaattcattttcagtgatgaatttatttccttttcttcccaataatttgtttca 33068844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 360 - 496
Target Start/End: Complemental strand, 44673255 - 44673109
Alignment:
Q  360 acttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagc----------aaccaaaccaaact 449  Q
    ||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||| ||||||||||||          ||||||||||||||    
T  44673255 acttggttcggatgaattcggatgacttttgcactgaaccgcgcggttcggtttggtttgcggtttgcatctcagcaaccgaaccaaaccaaaccaaact 44673156  T
Q  450 gcaagaataatgaatattacttaaacatgtattagcccaattacata 496  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  44673155 gcaagaataatgaatattacttaaacatgtactagcccaattacata 44673109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 362 - 539
Target Start/End: Original strand, 6200490 - 6200677
Alignment:
Q  362 ttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaacc----------aaaccaaactgc 451  Q
    ||||||||||||||||||||||| ||||||||| ||  | ||||||  ||| |||||  || |||||||| |||||||          ||||||||| ||    
T  6200490 ttggttcggatgaattcggatgacttttgcactgaatcgtgcggtttcgttcggtttttggtttgcatcttagcaaccaaaccaaaccaaaccaaaccgc 6200589  T
Q  452 aagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgca 539  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6200590 aagaataatgaatattactgaaacatgtactagcccaattacataacccaagaataatctcttttgattcgatttttccattgttgca 6200677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 357 - 448
Target Start/End: Original strand, 5802505 - 5802596
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaac 448  Q
    |||||||||||||||||| ||| ||||| ||||  ||| ||| ||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  5802505 cgcacttggttcggatgagttcagatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccaaaccaaac 5802596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 357 - 448
Target Start/End: Original strand, 3006186 - 3006272
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaac 448  Q
    |||||||||||||||||| ||||||| | ||||  ||| ||| |||||||||     ||||||||| |||||||||||||||| ||||||||    
T  3006186 cgcacttggttcggatgagttcggattacttttagactgaaccgcgcggttc-----ggtttgcggtttgcatctcagcaaccgaaccaaac 3006272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 578 - 642
Target Start/End: Complemental strand, 44673074 - 44673010
Alignment:
Q  578 tttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    |||||||||||||||||||||| ||| |||| ||||| | |||||||||||| || |||| ||||    
T  44673074 tttcattttcagtgatgaatttgttttctttacttccaagtaatttgtttcaggcttatgtttct 44673010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 443
Target Start/End: Complemental strand, 10661658 - 10661596
Alignment:
Q  380 gatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaac 443  Q
    ||||| ||||||||| |||  ||||||| |||||||||||| | ||||||||||||||||||||    
T  10661658 gatgacttttgcactgaaccacgcggtttggtttggtttgc-gtttgcatctcagcaaccaaac 10661596  T

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Target: scaffold0059 (Bit Score: 164; Significance: 2e-87; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 362 - 642
Target Start/End: Original strand, 69089 - 69379
Alignment:
Q  362 ttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaact----------gc 451  Q
    |||||| |||||||||||||||| ||||||| | ||| ||||||||||||||||||||||| |||||||||||||||| ||||||||           ||    
T  69089 ttggtttggatgaattcggatgacttttgcaatgaaccgcgcggttcggtttggtttgcggtttgcatctcagcaaccgaaccaaaccaaaacaacccgc 69188  T
Q  452 aagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcg 551  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||    
T  69189 aagaataatgaatattacttaaacatgtactagcctaattacatagcccaataataatctcttttgattcgatttttccattgttgcaccatcaaattcg 69288  T
Q  552 attctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    |||||||||||| |||| |||||| | ||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||| |||| ||||    
T  69289 attctaattcctttccatctctttcaattcatttccagtgataaatttgtttcattttcttcccaataatttgtttcatgcttatgtttct 69379  T

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Target: scaffold0059; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 362 - 556
Target Start/End: Original strand, 77195 - 77399
Alignment:
Q  362 ttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaact----------gc 451  Q
    |||||| |||||||||||||||| ||||||| | ||| ||||||||||||||||||||||| |||||||||||||||| ||||||||           ||    
T  77195 ttggtttggatgaattcggatgacttttgcaatgaaccgcgcggttcggtttggtttgcggtttgcatctcagcaaccgaaccaaaccaaaacaacccgc 77294  T
Q  452 aagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcaggttcg 551  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||  ||||    
T  77295 aagaataatgaatattacttaaacatgtactagcctaattacatagcccaataataatcacttttgattcgatttttccattgttgcaccatcaaattcg 77394  T
Q  552 attct 556  Q
    |||||    
T  77395 attct 77399  T

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Target: scaffold0013 (Bit Score: 142; Significance: 3e-74; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 357 - 642
Target Start/End: Complemental strand, 106569 - 106273
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaact------- 449  Q
    |||| ||||||||||||||||||||||| ||||||| | ||| ||||||||||||||||||||||| |||||||||| ||||| ||||||||            
T  106569 cgcatttggttcggatgaattcggatgacttttgcaatgaaccgcgcggttcggtttggtttgcggtttgcatctcaacaaccgaaccaaacccaaccaa 106470  T
Q  450 ---gcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcag 546  Q
       ||||||||||||||||||||||||||||||| ||||| |||||||||||| || |||||| |||||| ||||||||||||||||||||||||||||     
T  106469 cccgcaagaataatgaatattacttaaacatgtactagcctaattacatagcctaataataatttctttttattcgatttttccattgttgcaccatcaa 106370  T
Q  547 gttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttc-cttttcttcccaataatttgtttcatgcctatgcttct 642  Q
     |||||||||||||||| |||| |||||| | ||||||| ||||||| ||||| ||||  ||||||||| ||||||||||||||||| |||| ||||    
T  106369 attcgattctaattcctttccatctctttcaattcatttccagtgataaatttgtttcatttttcttccgaataatttgtttcatgcttatgtttct 106273  T

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Target: scaffold0013; HSP #2
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 436 - 642
Target Start/End: Complemental strand, 129087 - 128880
Alignment:
Q  436 aaccaaaccaaactgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgt 535  Q
    ||||||||||| | ||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||  ||||||||||||||||||    
T  129087 aaccaaaccaacccgcaagaataatgaatattacttaaacatgtactagcctaattacatagcccaataataatctctttatattcgatttttccattgt 128988  T
Q  536 tgcaccatcaggttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttc-cttttcttcccaataatttgtttcatgcct 634  Q
    ||||||||||  |||||||||||||||| |||| |||||| | ||||||||||||||| ||||| ||||  ||||||||||||||||||||||||||| |    
T  128987 tgcaccatcaaattcgattctaattcctttccatctctttcaattcattttcagtgataaatttgtttcatttttcttcccaataatttgtttcatgctt 128888  T
Q  635 atgcttct 642  Q
    ||| ||||    
T  128887 atgtttct 128880  T

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Target: scaffold0029 (Bit Score: 129; Significance: 2e-66; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 357 - 642
Target Start/End: Original strand, 40123 - 40418
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaacc----------aaaccaa 446  Q
    |||||||||||||||||||||||||||| ||||||||| ||| ||| || ||||||||||||| || || ||||||| |||||          |||||||    
T  40123 cgcacttggttcggatgaattcggatgacttttgcactgaaccgcgtggctcggtttggtttgtggttttcatctcaacaaccgaaccaaaccaaaccaa 40222  T
Q  447 actgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcag 546  Q
    ||  ||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||| ||||||||||| |||| |||||||||||| ||||||    
T  40223 accacaagaataatgaatattacttaaacatctactagcccaattacatagctcaagaataatttcttttgattcaatttgtccattgttgcaacatcag 40322  T
Q  547 gttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttttcttcccaataatttgtttcatgcctatgcttct 642  Q
    |||| |||||||||  | |||| |||||| | |||||||  |||||||||||||||| |||| |||||| ||||||||||| |||| |||| ||||    
T  40323 gttccattctaatttatttccatctctttcaattcatttcaagtgatgaatttatttactttacttccccataatttgtttaatgcttatgtttct 40418  T

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Target: scaffold0029; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 357 - 608
Target Start/End: Original strand, 47319 - 47580
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaacc----------aaaccaa 446  Q
    |||||||||||||||||||||||||||| ||||||||| ||| ||  || ||||||||||||| || || ||||||| |||||          |||||||    
T  47319 cgcacttggttcggatgaattcggatgacttttgcactgaaccgcatggctcggtttggtttgtggttttcatctcaacaaccgaaccaaaccaaaccaa 47418  T
Q  447 actgcaagaataatgaatattacttaaacatgtattagcccaattacatagcccaagaataatctcttttgattcgatttttccattgttgcaccatcag 546  Q
    ||  ||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||| ||||||    
T  47419 accacaagaataatgaatattacttaaacatctactagcccaattacatagctcaagaataatttcttttgattcgatttgtccattgttgcaacatcag 47518  T
Q  547 gttcgattctaattcctctccacctcttttatttcattttcagtgatgaatttatttccttt 608  Q
    |||| |||||||||  | |||| |||||| | |||||||  |||||||||||| ||| ||||    
T  47519 gttccattctaatttatttccatctctttcaattcatttcaagtgatgaatttgtttacttt 47580  T

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Target: scaffold0308 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 357 - 448
Target Start/End: Original strand, 5466 - 5557
Alignment:
Q  357 cgcacttggttcggatgaattcggatgatttttgcactaaactgcgcggttcggtttggtttgcggcttgcatctcagcaaccaaaccaaac 448  Q
    |||| ||||||||||||| |||| |||| ||||  ||| ||| ||||||||||||| ||||||||| |||||||||||||||| ||||||||    
T  5466 cgcatttggttcggatgagttcgaatgacttttagactgaaccgcgcggttcggttcggtttgcggtttgcatctcagcaaccgaaccaaac 5557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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