View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4513_high_42 (Length: 273)
Name: NF4513_high_42
Description: NF4513
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4513_high_42 |
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Alignment Details
Target: chr7 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 34 - 263
Target Start/End: Complemental strand, 32994272 - 32994043
Alignment:
| Q |
34 |
ggttaagaagagaaagcaaagaggataccgttaacagctagaatgacatatatgttagtgtacatgtaacatgtgaatagagatgacgaggttccttagg |
133 |
Q |
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| T |
32994272 |
ggttaagaagagaaagcaaagaggataccgttaacagctagaatgacatatatgttagtgtacatgtaacatgtgaatagagatgacgaggttccttagg |
32994173 |
T |
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| Q |
134 |
acaaaagattcaagaggtaatgaagaaaaacctgtaattgttgtcacagaaacagtgtgtaagtgtaattattattattatgagattctggtttatgtcc |
233 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32994172 |
acaaaagattcaagaggtaatgaagaaaaacctgtaattgttgtcacagaaacagtgtgtaagtgtaattattattattatgagattctggtttatgtcc |
32994073 |
T |
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| Q |
234 |
tttaatattctgcaaaatgtcttcatctca |
263 |
Q |
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||||||||||||||||||| | |||||||| |
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| T |
32994072 |
tttaatattctgcaaaatgccctcatctca |
32994043 |
T |
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