View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4513_high_8 (Length: 540)
Name: NF4513_high_8
Description: NF4513
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4513_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 457; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 457; E-Value: 0
Query Start/End: Original strand, 11 - 526
Target Start/End: Complemental strand, 31528687 - 31528179
Alignment:
| Q |
11 |
aatgagagatgattggatctaattccaaaaatttatacatttaggttcaaaaaattgagggtgtgcaaagtagaaatgaaacaagatattaggtgtaaat |
110 |
Q |
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| T |
31528687 |
aatgagagatcattggatctaattccaaaaatttatacatttaggttcaaaaaattgaggctgtggaaagtagaaatgaaacaagatattaggtgtaaat |
31528588 |
T |
|
| Q |
111 |
tttgaaaatccaggtaagcacaaggtgttcaaacgagtagcaatttgtttttgatctgagtattgtataatttaacataattaagagatacaatatgctt |
210 |
Q |
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| T |
31528587 |
tttgaaaatccaggtaagaacaaggtgttcaaacgagtagcaatttgtttt-gatctgagtattgtataatttaacataattaagagatacaatatgctt |
31528489 |
T |
|
| Q |
211 |
gtgcaccaaaacagaccttaaatacccaaattgcaataaaaacaaatgtacatctgagacaattactactagaaagcttactttttattggttcagtatt |
310 |
Q |
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| T |
31528488 |
gtgcaccaaaacagaccttaaatacccaaattgcaataaaaacaaatgtacatctgagacaattactactacaaagcttactttttattggtttagtatt |
31528389 |
T |
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| Q |
311 |
aagccaaggataagaaatatccaagtggtgaaaagggcttgggctaataacaataacaagtatgattatgaaggttgaaagagtacactgaaattaattg |
410 |
Q |
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| T |
31528388 |
aagccaaggataagaaatatccaagtgatgaaaagggcttgggctaata------acaagtatgattatgaaggttgaaagagtacactgaaattaattg |
31528295 |
T |
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| Q |
411 |
gtgatacatatggattttcaccattacaaagactatgagcagctagagtacaagcaaactctgagggatgatattgatcccaaaacaagaaatggcttcg |
510 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31528294 |
gtgatacatatggattttcaccattacaaagactatgagcagctagagtacaagcaaactctgagggatgatattgatcccaaaacaagaaatggcttcg |
31528195 |
T |
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| Q |
511 |
attttcacacactttg |
526 |
Q |
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|||||||||||||||| |
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| T |
31528194 |
attttcacacactttg |
31528179 |
T |
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