View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4513_low_17 (Length: 454)
Name: NF4513_low_17
Description: NF4513
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4513_low_17 |
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Alignment Details
Target: chr7 (Bit Score: 429; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 429; E-Value: 0
Query Start/End: Original strand, 19 - 447
Target Start/End: Original strand, 20545305 - 20545733
Alignment:
| Q |
19 |
gtatccgtatccgtgcttcatattaaactccgcaaccctgcaaaggctagtgttgggcatagggcagtaggggtgtattgaaagtctcacattccacatg |
118 |
Q |
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| T |
20545305 |
gtatccgtatccgtgcttcatattaaactccgcaaccctgcaaaggctagtgttgggcatagggcagtaggggtgtattgaaagtctcacattccacatg |
20545404 |
T |
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| Q |
119 |
atatgcgtgggggtacatttacgtgtaggagtgtgctttttaagctgattttgtggggtcgaattagacctgagttaaattctgagatttttcatgttgg |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20545405 |
atatgcgtgggggtacatttacgtgtaggagtgtgctttttaagctgattttgtggggtcgaattagacctgagttaaattctgagatttttcatgttgg |
20545504 |
T |
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| Q |
219 |
ttagaacatggttattacaaatattagaacatggtaacttatacatttcagagatgctattcatatcaattacaaactttgacttaggatgtttgagata |
318 |
Q |
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| T |
20545505 |
ttagaacatggttattacaaatattagaacatggtaacttatacatttcagagatgctattcatatcaattacaaactttgacttaggatgtttgagata |
20545604 |
T |
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| Q |
319 |
tatatgagttttaagttctgtattagctcattgaaatttgttttcctctctaaagttttatataaactacaagtttgaaattctaggatatatctctgag |
418 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20545605 |
tatatgagttttaagttctgtattagctcattgaaatttgttttcctctctaaagttttatataaactacaagtttgaaattctaggatatatctctgag |
20545704 |
T |
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| Q |
419 |
gtctatgttttatttatgtttgacctatg |
447 |
Q |
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| T |
20545705 |
gtctatgttttatttatgtttgacctatg |
20545733 |
T |
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