View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4513_low_43 (Length: 321)
Name: NF4513_low_43
Description: NF4513
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4513_low_43 |
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Alignment Details
Target: chr3 (Bit Score: 280; Significance: 1e-157; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 13 - 305
Target Start/End: Original strand, 36793572 - 36793866
Alignment:
| Q |
13 |
gagaagaagacacatcacacatgcactata--tatatttcaaagttgattaatgcatgagacatatatttcaagggtgatatatataggtgtcggggtat |
110 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36793572 |
gagaagaagacacatcacacatgcactatatatatatttcaaagttgattaatgcatgagacatatatttcaagggtgatatatataggtgtcggggtat |
36793671 |
T |
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| Q |
111 |
agaaattgaatgactatacacgtgggaaatgagttacacatgtcaaaaactttggtatagcattgtagctctcattagtaacacgtacattttgtattga |
210 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36793672 |
agaaattgaatgactatacacgtgggaaatgagttacacatgtcaaaaacttttgtatagcattgtagctctcattagtaacacgtacattttgtattga |
36793771 |
T |
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| Q |
211 |
aaatcaattaacaccacacagtaactcgatgtgtattttcacgtgccttctatttctttgcagctacatttgcttgccctttagaagtggaaatt |
305 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36793772 |
aaatcaattaacaccacacagtaactcgatgtgtattttcacgtgccttctatttctttgcagctacatttgcttgccctttagaagtggaaatt |
36793866 |
T |
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