View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4513_low_76 (Length: 244)

Name: NF4513_low_76
Description: NF4513
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4513_low_76
NF4513_low_76
[»] chr6 (17 HSPs)
chr6 (20-202)||(24203895-24204077)
chr6 (20-203)||(9698240-9698423)
chr6 (20-201)||(13743130-13743311)
chr6 (20-201)||(13748630-13748811)
chr6 (20-196)||(26669923-26670099)
chr6 (20-203)||(21279939-21280122)
chr6 (20-202)||(30735992-30736174)
chr6 (20-203)||(7273242-7273425)
chr6 (20-203)||(3213410-3213593)
chr6 (22-199)||(7367561-7367738)
chr6 (20-209)||(21293578-21293767)
chr6 (24-196)||(7292761-7292933)
chr6 (20-203)||(26466809-26466992)
chr6 (20-201)||(30014353-30014534)
chr6 (20-109)||(27441552-27441641)
chr6 (20-109)||(33242413-33242502)
chr6 (20-109)||(33253923-33254012)
[»] chr8 (25 HSPs)
chr8 (20-204)||(36743389-36743573)
chr8 (20-204)||(11582776-11582960)
chr8 (20-201)||(42197344-42197525)
chr8 (20-202)||(31384674-31384856)
chr8 (20-203)||(30912469-30912652)
chr8 (20-198)||(2165875-2166053)
chr8 (23-205)||(45397329-45397510)
chr8 (20-201)||(26125645-26125825)
chr8 (20-197)||(29705372-29705549)
chr8 (20-196)||(29800864-29801040)
chr8 (20-202)||(2547006-2547188)
chr8 (20-203)||(20148770-20148953)
chr8 (20-203)||(30660649-30660832)
chr8 (20-203)||(1375552-1375735)
chr8 (20-172)||(5754913-5755065)
chr8 (20-202)||(42295205-42295386)
chr8 (63-202)||(9241605-9241744)
chr8 (26-202)||(3743787-3743963)
chr8 (20-179)||(40528565-40528725)
chr8 (20-106)||(42699267-42699353)
chr8 (20-109)||(18066719-18066808)
chr8 (20-109)||(35181526-35181615)
chr8 (20-109)||(34304798-34304887)
chr8 (114-178)||(16056412-16056477)
chr8 (48-109)||(33629994-33630055)
[»] chr3 (30 HSPs)
chr3 (20-202)||(54237106-54237288)
chr3 (20-203)||(42394326-42394509)
chr3 (20-205)||(46941063-46941248)
chr3 (20-202)||(40808875-40809057)
chr3 (20-203)||(25413691-25413874)
chr3 (20-203)||(54246055-54246238)
chr3 (20-202)||(24688310-24688492)
chr3 (20-202)||(45126836-45127018)
chr3 (20-203)||(47190933-47191115)
chr3 (20-203)||(36150140-36150323)
chr3 (20-202)||(40480759-40480941)
chr3 (20-202)||(53581766-53581948)
chr3 (20-202)||(42100698-42100880)
chr3 (60-205)||(52629878-52630023)
chr3 (20-152)||(27748573-27748705)
chr3 (20-203)||(1078237-1078411)
chr3 (22-152)||(53273642-53273772)
chr3 (59-151)||(51249357-51249449)
chr3 (22-177)||(11064655-11064810)
chr3 (20-109)||(10457893-10457982)
chr3 (20-109)||(4190266-4190355)
chr3 (20-109)||(9434134-9434223)
chr3 (20-98)||(25996278-25996356)
chr3 (20-109)||(51757603-51757692)
chr3 (22-112)||(29558232-29558322)
chr3 (23-109)||(52627978-52628064)
chr3 (20-109)||(34791839-34791928)
chr3 (112-203)||(29556866-29556956)
chr3 (60-104)||(19148829-19148873)
chr3 (132-175)||(51419389-51419433)
[»] chr7 (30 HSPs)
chr7 (20-204)||(24000918-24001102)
chr7 (20-202)||(42538339-42538521)
chr7 (26-199)||(27393171-27393344)
chr7 (20-202)||(32029725-32029907)
chr7 (20-205)||(44416839-44417024)
chr7 (20-203)||(44326188-44326371)
chr7 (20-202)||(10573759-10573941)
chr7 (20-202)||(43343532-43343714)
chr7 (20-210)||(45326030-45326220)
chr7 (20-203)||(5810831-5811014)
chr7 (20-202)||(26898310-26898492)
chr7 (20-196)||(5015405-5015581)
chr7 (20-203)||(16180264-16180446)
chr7 (20-202)||(41861684-41861868)
chr7 (20-203)||(9216312-9216494)
chr7 (20-203)||(35069731-35069914)
chr7 (23-204)||(42972865-42973046)
chr7 (20-203)||(4638106-4638289)
chr7 (48-180)||(38160509-38160641)
chr7 (20-177)||(5194164-5194321)
chr7 (20-177)||(43317453-43317610)
chr7 (23-161)||(24280545-24280683)
chr7 (90-203)||(47279631-47279744)
chr7 (20-98)||(40236929-40237007)
chr7 (20-77)||(39998418-39998475)
chr7 (20-109)||(31513297-31513386)
chr7 (20-109)||(27535232-27535321)
chr7 (20-109)||(31408634-31408723)
chr7 (45-109)||(33384906-33384970)
chr7 (130-203)||(27535138-27535211)
[»] chr5 (15 HSPs)
chr5 (20-204)||(2614555-2614739)
chr5 (20-204)||(33801479-33801663)
chr5 (20-210)||(5257005-5257195)
chr5 (20-202)||(18033992-18034174)
chr5 (20-202)||(41334571-41334753)
chr5 (20-177)||(22512315-22512472)
chr5 (20-211)||(7617143-7617334)
chr5 (20-196)||(38470589-38470765)
chr5 (20-177)||(39122366-39122522)
chr5 (20-203)||(25914903-25915077)
chr5 (97-203)||(39122263-39122369)
chr5 (20-109)||(32473395-32473484)
chr5 (20-85)||(33855068-33855133)
chr5 (130-201)||(32473303-32473374)
chr5 (47-109)||(17208111-17208173)
[»] scaffold0038 (1 HSPs)
scaffold0038 (20-203)||(112665-112848)
[»] chr2 (30 HSPs)
chr2 (20-203)||(19047167-19047350)
chr2 (20-203)||(30838642-30838825)
chr2 (20-202)||(1750424-1750606)
chr2 (20-203)||(43490308-43490491)
chr2 (20-205)||(12302158-12302343)
chr2 (20-204)||(4764632-4764816)
chr2 (52-201)||(42849768-42849916)
chr2 (22-202)||(43335671-43335851)
chr2 (20-202)||(16096757-16096940)
chr2 (48-169)||(13780676-13780797)
chr2 (60-204)||(39149200-39149342)
chr2 (64-197)||(42026823-42026956)
chr2 (20-203)||(34817683-34817866)
chr2 (20-151)||(8896542-8896673)
chr2 (20-104)||(33229311-33229396)
chr2 (20-109)||(43114567-43114656)
chr2 (20-109)||(11825655-11825744)
chr2 (20-109)||(41281975-41282064)
chr2 (20-109)||(12415461-12415550)
chr2 (20-109)||(12427521-12427610)
chr2 (20-109)||(16803978-16804067)
chr2 (20-109)||(16843260-16843349)
chr2 (20-109)||(34895742-34895831)
chr2 (22-95)||(4299435-4299508)
chr2 (40-109)||(4451951-4452020)
chr2 (20-95)||(6518484-6518558)
chr2 (20-99)||(7070426-7070505)
chr2 (20-103)||(18491715-18491798)
chr2 (20-109)||(966835-966924)
chr2 (130-203)||(12531570-12531643)
[»] chr1 (28 HSPs)
chr1 (20-211)||(5489786-5489977)
chr1 (20-202)||(43570994-43571176)
chr1 (20-203)||(7447836-7448018)
chr1 (20-207)||(4401337-4401525)
chr1 (21-203)||(24769406-24769588)
chr1 (20-202)||(48498870-48499052)
chr1 (20-207)||(50448163-50448350)
chr1 (20-201)||(37814788-37814969)
chr1 (23-203)||(750212-750392)
chr1 (20-204)||(2497468-2497652)
chr1 (20-202)||(23989431-23989614)
chr1 (58-204)||(4888091-4888236)
chr1 (20-109)||(45427746-45427835)
chr1 (20-109)||(44112687-44112776)
chr1 (20-109)||(48119638-48119727)
chr1 (20-109)||(35003304-35003393)
chr1 (20-109)||(46168393-46168482)
chr1 (22-109)||(45705837-45705924)
chr1 (20-109)||(35000114-35000203)
chr1 (20-109)||(38335928-38336017)
chr1 (20-109)||(41065163-41065252)
chr1 (20-109)||(45639733-45639822)
chr1 (22-103)||(38113202-38113283)
chr1 (47-109)||(26585499-26585561)
chr1 (130-204)||(41065271-41065345)
chr1 (130-203)||(38113102-38113175)
chr1 (130-203)||(44112797-44112870)
chr1 (111-178)||(7740757-7740825)
[»] chr4 (39 HSPs)
chr4 (32-205)||(23036002-23036175)
chr4 (20-202)||(33703151-33703333)
chr4 (20-202)||(35017743-35017924)
chr4 (20-203)||(1771173-1771356)
chr4 (20-203)||(27550319-27550502)
chr4 (20-207)||(27893745-27893932)
chr4 (20-203)||(28982729-28982912)
chr4 (20-203)||(55966253-55966436)
chr4 (20-202)||(25051703-25051885)
chr4 (20-202)||(43514594-43514776)
chr4 (20-203)||(27864574-27864757)
chr4 (20-202)||(23204686-23204868)
chr4 (29-180)||(39631120-39631271)
chr4 (25-206)||(31680917-31681098)
chr4 (20-203)||(43735752-43735935)
chr4 (20-202)||(43949709-43949892)
chr4 (20-196)||(48463364-48463540)
chr4 (20-178)||(45490245-45490403)
chr4 (52-202)||(51512173-51512323)
chr4 (22-202)||(12496968-12497148)
chr4 (24-204)||(27316618-27316799)
chr4 (60-203)||(21687056-21687199)
chr4 (20-163)||(41878416-41878559)
chr4 (20-151)||(28988483-28988614)
chr4 (63-193)||(46412386-46412516)
chr4 (48-180)||(41848009-41848141)
chr4 (20-109)||(17619153-17619242)
chr4 (64-213)||(56215795-56215943)
chr4 (73-209)||(41327444-41327580)
chr4 (20-104)||(3756252-3756336)
chr4 (20-109)||(711970-712059)
chr4 (20-109)||(32728367-32728456)
chr4 (20-109)||(48435580-48435669)
chr4 (20-109)||(55272377-55272466)
chr4 (46-98)||(35037041-35037093)
chr4 (130-202)||(48435487-48435559)
chr4 (40-109)||(38851543-38851612)
chr4 (45-109)||(19879989-19880053)
chr4 (50-82)||(49243934-49243966)
[»] scaffold0119 (1 HSPs)
scaffold0119 (20-196)||(695-871)
[»] scaffold0187 (2 HSPs)
scaffold0187 (20-202)||(14097-14278)
scaffold0187 (20-202)||(24425-24606)
[»] scaffold0385 (1 HSPs)
scaffold0385 (20-202)||(11261-11443)
[»] scaffold0157 (1 HSPs)
scaffold0157 (22-202)||(23329-23509)
[»] scaffold0003 (1 HSPs)
scaffold0003 (20-109)||(45720-45809)
[»] scaffold0100 (1 HSPs)
scaffold0100 (20-109)||(35457-35546)


Alignment Details
Target: chr6 (Bit Score: 143; Significance: 3e-75; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 24204077 - 24203895
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  24204077 acatgaacaccatttattcctacaccctattgtacactccatgtattagggatattttggtaagttcatctcacaaccacactttatattctatttgtgt 24203978  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactc 202  Q
    ||||||||  ||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||| |||||||||||    
T  24203977 ggggtccaagttgccacgtgtcagaattttgtgtggatgtaaagggtgtattgtcacatggagtggtacatgtatcatcactc 24203895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 20 - 203
Target Start/End: Complemental strand, 9698423 - 9698240
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| ||||||||||||||| ||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  9698423 acatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgt 9698324  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    ||||||||||||||||||||||||||||||||  ||||||||||| ||||||| ||||||  ||||||||| |||||| |||||    
T  9698323 ggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgtattgccacatgaggtggtacatgtatcattactct 9698240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 20 - 201
Target Start/End: Complemental strand, 13743311 - 13743130
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  13743311 acatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgt 13743212  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcact 201  Q
    ||||||||| ||||||||||||||||| ||||| ||||||||||||| ||||| ||||| | ||||||||| ||||| ||||    
T  13743211 ggggtccaggttgccacgtgtcagaatcttgtgtgggtgtaaaggatatattgccacatagggtggtacatgtatcaccact 13743130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 20 - 201
Target Start/End: Complemental strand, 13748811 - 13748630
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  13748811 acatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgt 13748712  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcact 201  Q
    ||||||||| ||||||||||||||||| ||||| ||||||||||||| ||||| ||||| | ||||||||| ||||| ||||    
T  13748711 ggggtccaggttgccacgtgtcagaatcttgtgtgggtgtaaaggatatattgccacatagggtggtacatgtatcaccact 13748630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 20 - 196
Target Start/End: Complemental strand, 26670099 - 26669923
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| |||||||||||| |  |||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26670099 acatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgt 26670000  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatca 196  Q
    || |||||| ||||||||||||||||||||||| ||||||||||| ||||||| ||||||  |||||||||||||||    
T  26669999 ggagtccaggttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgaggtggtacatatatca 26669923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 20 - 203
Target Start/End: Original strand, 21279939 - 21280122
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| |||||| |||||| | |||| |||  |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  21279939 acatgaacaccctttatttctacattccattgcacatcccatgtattagggatattttggtaaattcatctcacaaccacactttatcttctatttgtgt 21280038  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    ||||||||  ||||||||||||||||||||||| ||||||||||| | ||||| ||||||| ||||||||| ||||||||||||    
T  21280039 ggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaagggtatattgccacatggggtggtacatgtatcatcactct 21280122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 30735992 - 30736174
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    |||||||||| ||||||||||||| || |||||||||  |||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||| |||    
T  30735992 acatgaacactttttattcctacaccccattgtacacctcatgtattagtgatattttggtaagttcatctcacaatcacactttatcttctatttatgt 30736091  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactc 202  Q
    ||||||||| ||||||||||||||||||||||| || |||||||| ||||||| |||||||  |||||||| |||||||||||    
T  30736092 ggggtccaggttgccacgtgtcagaattttgtgtggatgtaaagggtgtattgccacatgggatggtacatgtatcatcactc 30736174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 20 - 203
Target Start/End: Complemental strand, 7273425 - 7273242
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| |||||||||||| | |||||||||| ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||| |||    
T  7273425 acatgaacaccctttattcctacaccttattgtacaccccatgtattagagatattttggtaagttcatctcacaatcacactttatcttctatttatgt 7273326  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    ||||||||  ||||||||||||||||||||||| ||||||||||  ||||||  ||||||| |||||||||  |||||||||||    
T  7273325 ggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaagagtgtattaccacatggggtggtacatgcatcatcactct 7273242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 20 - 203
Target Start/End: Original strand, 3213410 - 3213593
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    |||| |||||| ||||||| ||||||  ||||||||| |||||||||| ||||||||| |||| ||||| ||||||||| |||||||||||||||| |||    
T  3213410 acataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattttggtaaattcatttcacaaccatactttatcttctatttatgt 3213509  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    |||||||||||||||||||||||||||||| || ||||||||||| ||||||| ||||||| ||||||||| ||||| ||||||    
T  3213510 ggggtccagattgccacgtgtcagaattttatgtgggtgtaaagggtgtattgccacatggggtggtacatgtatcaccactct 3213593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 22 - 199
Target Start/End: Original strand, 7367561 - 7367738
Alignment:
Q  22 atgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgtgg 121  Q
    ||||||| | ||||||| |||| |  ||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||    
T  7367561 atgaacatcatttattcatacacctcattgtacatcccatgtattagggatattttggtaagttcatctcacaaccacactttattttctatttatgtgg 7367660  T
Q  122 ggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatca 199  Q
    | ||||| ||||||||||||||||||||||| ||||||||||| ||||||| ||||||| ||||||||| ||||||||    
T  7367661 gatccaggttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatggggtggtacatgtatcatca 7367738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 20 - 209
Target Start/End: Complemental strand, 21293767 - 21293578
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    |||| |||||| ||||||| |||||   | ||||||| |||||||||| ||||||||| |||| ||||| |||||||||||||||||||||||||| |||    
T  21293767 acataaacaccctttattcatacatttcactgtacaccccatgtattaaggatattttggtaaattcatttcacaaccacactttatcttctatttatgt 21293668  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactctaattaa 209  Q
    |||||||||||||||||||||||||||||| || ||||||||||| ||||||| ||||||  ||||||||| ||||| ||||||||||||    
T  21293667 ggggtccagattgccacgtgtcagaattttatgtgggtgtaaagggtgtattgccacatgaggtggtacatgtatcaccactctaattaa 21293578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 24 - 196
Target Start/End: Original strand, 7292761 - 7292933
Alignment:
Q  24 gaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgtgggg 123  Q
    ||||||| ||||||| |||| |  ||| ||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7292761 gaacaccatttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtgggg 7292860  T
Q  124 tccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatca 196  Q
    ||||| ||||||||||||||||||||||  | ||||||||| ||||||| ||||||| ||||||||| |||||    
T  7292861 tccaggttgccacgtgtcagaattttgtttgtgtgtaaagggtgtattgccacatggggtggtacatgtatca 7292933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 20 - 203
Target Start/End: Original strand, 26466809 - 26466992
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    |||| |||||| |||||||||||| || ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |    
T  26466809 acataaacaccctttattcctacaccccattgtacactccatgtattagggttattttggtaagttcatctcacaaccacactttatcttctatttgttt 26466908  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    ||||| ||| ||||||||| |||| |||||||  ||||||||| | ||||||| ||||| | |||||| || ||||||||||||    
T  26466909 ggggttcaggttgccacgtatcaggattttgtatgggtgtaaaaggtgtattgccacatagggtggtaaatgtatcatcactct 26466992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 20 - 201
Target Start/End: Original strand, 30014353 - 30014534
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| ||||||||||||||| ||| ||||  |||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||| | |    
T  30014353 acatgaacaccctttattcctacatcccattatacatcccatgtattaggcatattttggtaagttcatctcacaaccatactttatcttctatttatat 30014452  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcact 201  Q
    ||||||||  || |||||||||||||||||||| || |||||||| ||||||| ||||||| ||| ||||| ||||||||||    
T  30014453 ggggtccaagttaccacgtgtcagaattttgtgtggatgtaaagggtgtattgccacatggggtgatacatgtatcatcact 30014534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 27441552 - 27441641
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    ||||||||||| |||| || |||| |||||||||||  | |||||||| ||||||||| |||| ||||||||||||||| ||||| ||||    
T  27441552 acatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaaattcatctcacaaccatactttctctt 27441641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 33242413 - 33242502
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    ||||||||||| |||| || |||| | |||||||||| |||||||||| ||| ||||| |||| |||||||||||| || ||||| ||||    
T  33242413 acatgaacaccatttaatcatacaccttattgtacaccccatgtattaaggacattttggtaaattcatctcacaaacatactttctctt 33242502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 33253923 - 33254012
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    ||||||||||| |||| ||  ||| |||||||||||| ||||| |||||||| || || |||| |||||||||||| || ||||||||||    
T  33253923 acatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcacaatcatactttatctt 33254012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 137; Significance: 1e-71; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 20 - 204
Target Start/End: Complemental strand, 36743573 - 36743389
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| ||||||||||||||| ||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  36743573 acatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgt 36743474  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactcta 204  Q
    ||||||||||||||||||||||||||||||||  ||||||||| | ||||||| ||||||| ||||||||| |||||||||||||    
T  36743473 ggggtccagattgccacgtgtcagaattttgtatgggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactcta 36743389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 11582776 - 11582960
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| ||||||||||||||| ||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  11582776 acatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgt 11582875  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactcta 204  Q
    ||||||||||||||||||||||||||||||||  ||||||||||| ||||||| ||||||  ||||||||| |||||| ||||||    
T  11582876 ggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgtattgccacatgaggtggtacatgtatcattactcta 11582960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 20 - 201
Target Start/End: Complemental strand, 42197525 - 42197344
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| |||||||||||| || |||| |||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  42197525 acatgaacaccatttattcctacaccccattgcacacactatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgt 42197426  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcact 201  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||| ||||||| ||||||| ||||||||| ||||||||||    
T  42197425 ggggtccagattgccacgtgtcaaaattttgtgtgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcact 42197344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 31384674 - 31384856
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| ||||||| ||||| ||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  31384674 acatgaacaccctttattcttacattctattgtacaccccatgtattaggaatattttggtaagttcatctcacaaccacactttatcttctatttgtgt 31384773  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactc 202  Q
    ||||||||| |||| ||||||||||||||| || || |||||||| | ||||| ||||||| |||||||||||||||||||||    
T  31384774 ggggtccaggttgctacgtgtcagaattttatgtggatgtaaagggtatattgccacatggggtggtacatatatcatcactc 31384856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 20 - 203
Target Start/End: Complemental strand, 30912652 - 30912469
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| |||||||||||| || |||||||||| |||||||||||| |||||| ||||||||||||||||||| ||| |||||||||||||||||    
T  30912652 acatgaacaccctttattcctacaccccattgtacacttcatgtattaggggtattttggtaagttcatctcacaaccgcaccttatcttctatttgtgt 30912553  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    |||||| || ||||||||||||||||||||||| ||||||||||  ||||||| ||||||| ||||||||| ||||||||||||    
T  30912552 ggggtctaggttgccacgtgtcagaattttgtgtgggtgtaaagagtgtattgccacatggggtggtacatgtatcatcactct 30912469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 20 - 198
Target Start/End: Complemental strand, 2166053 - 2165875
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| |||||||||||| || |||||| || ||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  2166053 acatgaacaccatttattcctacaccccattgtataccccatgtattagagatattttggtaagttcatctcataaccacactttatcttctatttgtgt 2165954  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatc 198  Q
    ||||| ||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||  |||||||| |||||||    
T  2165953 ggggttcaggttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgtcacatgggatggtacatgtatcatc 2165875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 23 - 205
Target Start/End: Original strand, 45397329 - 45397510
Alignment:
Q  23 tgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgtggg 122  Q
    |||||||| |||||||||||| || ||| ||||| | |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  45397329 tgaacaccctttattcctacaccccattctacaccctatgtattagggatatttttgtaagttcatctcacaaccacaatttatcttctatttgtgtggg 45397428  T
Q  123 gtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactctaa 205  Q
     ||||||||||||||||||||||||||||| ||||||||||| ||| ||| ||||||| ||||||||| ||||||||||||||    
T  45397429 ctccagattgccacgtgtcagaattttgtgtgggtgtaaagggtgtgttgccacatgg-gtggtacatgtatcatcactctaa 45397510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 20 - 201
Target Start/End: Original strand, 26125645 - 26125825
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    |||| |||||| ||||||| ||||| | ||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  26125645 acataaacaccctttattcatacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttatgt 26125744  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcact 201  Q
     ||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||| ||||||||||||||| ||||    
T  26125745 -gggtccagattgccacgtgtcagaattttatgcgggtgtaaagggtgtattgccacatggggtggtacatatatcaccact 26125825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 20 - 197
Target Start/End: Original strand, 29705372 - 29705549
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| |||||| ||||| || ||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||     
T  29705372 acatgaacaccctttatttctacaccccattgtacaccccatgtattagggatattttgataagttcatctcacaaccacactttatcttctatttgtgc 29705471  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcat 197  Q
    ||||||||  ||||||||||||||||||||||| ||||||||||| ||||||| ||||||| ||||||||| ||||||    
T  29705472 ggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatggggtggtacatgtatcat 29705549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 20 - 196
Target Start/End: Complemental strand, 29801040 - 29800864
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    |||| |||||| ||||||| ||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  29801040 acataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttatgt 29800941  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatca 196  Q
    |||||| |||||||||| |||||||||||| || ||||||||||| ||||||| ||||||| ||||||||| |||||    
T  29800940 ggggtcaagattgccacatgtcagaattttatgtgggtgtaaagggtgtattgccacatggggtggtacatgtatca 29800864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 2547006 - 2547188
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||  |||||| |||||  | |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2547006 acatgaacactctttatttctacactccattgtacacctcatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 2547105  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactc 202  Q
    ||| ||||  ||||||||||||||||||||||| ||||||||||| ||||||| ||||| | ||||||||| |||||||||||    
T  2547106 gggatccaagttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatagggtggtacatgtatcatcactc 2547188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 20 - 203
Target Start/End: Original strand, 20148770 - 20148953
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    |||| |||||| ||||||| ||||||| |||||||||  ||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||    
T  20148770 acataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatctcacaaccacactttatcatctatttatgt 20148869  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    ||| |||||||||||||||||||||||||| || ||||||||||| ||||||| ||||||| ||||||||| ||||| ||||||    
T  20148870 gggatccagattgccacgtgtcagaattttatgtgggtgtaaagggtgtattgccacatggtgtggtacatgtatcaccactct 20148953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 20 - 203
Target Start/End: Complemental strand, 30660832 - 30660649
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| |||||| |||||||| ||||||||| | |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  30660832 acatgaacaccctttatttctacatcccattgtacaccctatgtattagggatattttggtaagttcatcttacaaccacactttatcttctatttgtgt 30660733  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    ||||||||| |||||||||||||||||||| || || |||||||| ||||||| ||||| |  || ||||| ||||||||||||    
T  30660732 ggggtccaggttgccacgtgtcagaattttatgtggatgtaaagggtgtattgccacataggatgatacatgtatcatcactct 30660649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 20 - 203
Target Start/End: Original strand, 1375552 - 1375735
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||||||||||| |||| || ||||||||| |||| ||||||||||||||| |||| || |||||||||| ||||||||||||||||||||||    
T  1375552 acatgaacaccttttattcatacacccaattgtacaccccatatattagggatattttggtaaatttatctcacaactacactttatcttctatttgtgt 1375651  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    || || ||||||||||||||| ||||| ||||| |||||||||| |||||||||||||| | ||||||||| ||||| ||||||    
T  1375652 ggagttcagattgccacgtgttagaatcttgtgtgggtgtaaagaatgtattgtcacatagggtggtacatgtatcaccactct 1375735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 20 - 172
Target Start/End: Original strand, 5754913 - 5755065
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||||||||||||||||||| ||||||||  |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  5754913 acatgaacaccttttattcctacatcccattgtacatcccatatattagggatattttggtaagttcatctcacaaccacactttatcttctatttatgt 5755012  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattg 172  Q
    ||| ||||  ||||||||||| ||||||||||| ||||||||||| |||||||    
T  5755013 gggatccaagttgccacgtgttagaattttgtgtgggtgtaaagggtgtattg 5755065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 42295205 - 42295386
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| |||||||||||| |  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  42295205 acatgaacaccctttattcctacacctcattgtacactccatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttatgt 42295304  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactc 202  Q
     |||||||  ||||||| ||||||||||||||| || |||||||| | ||||| ||||| |  |||||||| |||||||||||    
T  42295305 -gggtccaagttgccacatgtcagaattttgtgtggatgtaaagggtatattgccacataggatggtacatttatcatcactc 42295386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 63 - 202
Target Start/End: Original strand, 9241605 - 9241744
Alignment:
Q  63 tattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgtgcgggtgtaaa 162  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||| |||    
T  9241605 tattagggatatttttgtaagttcatctcacaaccacactttatcttctatttatgtggggtccaggttgccacgtgtcagaattttgtgtgggtgcaaa 9241704  T
Q  163 ggatgtattgtcacatggagtggtacatatatcatcactc 202  Q
    || ||| ||| ||||||| ||||||||| |||||||||||    
T  9241705 gggtgtgttgccacatggggtggtacatgtatcatcactc 9241744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 26 - 202
Target Start/End: Original strand, 3743787 - 3743963
Alignment:
Q  26 acaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgtggggtc 125  Q
    ||||| ||||||| | | ||| ||| ||||| |||| ||||| | |||||||  |||||||||||||||||||||||||||||||||||| ||| ||||     
T  3743787 acaccctttattcatccctcccattatacaccccatatattaagtatattttgataagttcatctcacaaccacactttatcttctatttatgtagggtt 3743886  T
Q  126 cagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactc 202  Q
    |||||||||||||||||||||||| || ||||||||||| |||||||  |||||| |||||||||||||||||||||    
T  3743887 cagattgccacgtgtcagaattttatgtgggtgtaaagggtgtattgctacatggggtggtacatatatcatcactc 3743963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 179
Target Start/End: Complemental strand, 40528725 - 40528565
Alignment:
Q  20 acatgaacacc-ttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtg 118  Q
    ||||||||||| ||||||||  | | || ||||||||| |||| ||||||||| |||||  ||| || |||||||||||||||||| |||||||||||||    
T  40528725 acatgaacacccttttattcacaaaccccattgtacaccccatatattagggacattttgataaatttatctcacaaccacactttctcttctatttgtg 40528626  T
Q  119 tggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatg 179  Q
    |||||| ||  ||| ||| ||||| ||||||||| || |||||| ||| ||||||||||||    
T  40528625 tggggttcaagttgtcacatgtcataattttgtgtggatgtaaatgatatattgtcacatg 40528565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 42699267 - 42699353
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttat 106  Q
    ||||||||||| |||||||||||| || |||||||||   |||||||| ||||||||| ||||||||||||||||||||||||||||    
T  42699267 acatgaacaccctttattcctacaccccattgtacaccttatgtattatggatatttttgtaagttcatctcacaaccacactttat 42699353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 18066808 - 18066719
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    ||||||||||| |||| || ||||| ||||||||||  ||||||||||||||||||||||||| ||||||||||||||| ||||| ||||    
T  18066808 acatgaacaccctttaatcatacattctattgtacatcccatgtattagggatattttagtaatttcatctcacaaccatactttctctt 18066719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 35181526 - 35181615
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    ||||||||||| |||| || |||| |||||||||||| ||||| |||||||| ||||| |||| ||||||||||||||| ||||| ||||    
T  35181526 acatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctt 35181615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 34304798 - 34304887
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    ||||||||| | |||| || |||| |||||||||||| ||||| |||||||| ||||| |||| ||||||||||||||| ||||| ||||    
T  34304798 acatgaacatcctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctt 34304887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 16056412 - 16056477
Alignment:
Q  114 ttgtgtggggtccagattgccacgtgtcagaattttgtgcgggtgtaaagg-atgtattgtcacat 178  Q
    ||||| |||||||| || ||||| ||||||| ||||||| |||||| |||| ||||||||||||||    
T  16056412 ttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacat 16056477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 109
Target Start/End: Complemental strand, 33630055 - 33629994
Alignment:
Q  48 attgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    ||||||||| | ||| |||||||| |||||||||| ||||||||||||| | ||||| ||||    
T  33630055 attgtacaccctatgcattagggacattttagtaatttcatctcacaactatactttctctt 33629994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 135; Significance: 2e-70; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 54237106 - 54237288
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| ||||||||||||||| ||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  54237106 acatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgt 54237205  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactc 202  Q
    ||||||||||||||||||||||||||| ||||  ||||||||||| ||||||| ||||||| ||||||||| |||||||||||    
T  54237206 ggggtccagattgccacgtgtcagaatattgtatgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactc 54237288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 20 - 203
Target Start/End: Complemental strand, 42394509 - 42394326
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| ||||||||||||| | ||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  42394509 acatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgt 42394410  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    ||||||||||||||||||||||| ||||||||  ||||||||||| ||||||| ||||||| ||||||||| ||||||||||||    
T  42394409 ggggtccagattgccacgtgtcaaaattttgtatgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactct 42394326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 20 - 205
Target Start/End: Original strand, 46941063 - 46941248
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| ||||||||||||||  ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  46941063 acatgaacaccctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgt 46941162  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactctaa 205  Q
    ||||||||  |||||||||||||||||||| || ||||||||||  ||||||| ||||||| ||||||||| ||||||||||||||    
T  46941163 ggggtccaagttgccacgtgtcagaattttatgtgggtgtaaagagtgtattgccacatggggtggtacatgtatcatcactctaa 46941248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 40808875 - 40809057
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    |||| |||||| |||||||||||| || ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  40808875 acatcaacaccatttattcctacaccccattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgt 40808974  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactc 202  Q
    ||||||||| ||||||||||||||||||||||| || |||||| | ||||||| ||||||| ||||||||| |||||||||||    
T  40808975 ggggtccaggttgccacgtgtcagaattttgtgtggatgtaaaaggtgtattgccacatggggtggtacatgtatcatcactc 40809057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 20 - 203
Target Start/End: Original strand, 25413691 - 25413874
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| |||||||||||| || |||||||||   |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  25413691 acatgaacaccctttattcctacaccccattgtacaccttatgtattagggatatttttgtaagttcatctcacaaccacactttatcttctatttgtgt 25413790  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    ||||||||| || |||||||||||| ||||||| ||||||||||| |||||||||| |||| ||||||||| ||||||||||||    
T  25413791 ggggtccaggttaccacgtgtcagagttttgtgtgggtgtaaagggtgtattgtcatatggggtggtacatgtatcatcactct 25413874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 20 - 203
Target Start/End: Complemental strand, 54246238 - 54246055
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| |||||||||||| || ||||||||| | ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  54246238 acatgaacaccctttattcctacaccccattgtacaccctatgtattagagatatttttgtaagttcatctcacaaccacactttatcttctatttgtgt 54246139  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    ||||||||| ||||||| |||||||||||| || |||||||||| |||||||| ||||||| ||||||||| ||||||||||||    
T  54246138 ggggtccaggttgccacatgtcagaattttatgtgggtgtaaagaatgtattgccacatggggtggtacatgtatcatcactct 54246055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 24688492 - 24688310
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| |||||| |||||  | ||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  24688492 acatgaacaccctttatttctacactccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttatgt 24688393  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactc 202  Q
    ||||||||| ||||||||||||||||||||||| ||| ||||| | ||||||| ||||||| ||||||||| |||||||||||    
T  24688392 ggggtccaggttgccacgtgtcagaattttgtgtgggggtaaatggtgtattgccacatggggtggtacatgtatcatcactc 24688310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 45127018 - 45126836
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    |||| |||||| ||||||| ||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||    
T  45127018 acataaacaccctttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttattttctatttatgt 45126919  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactc 202  Q
    |||||||||||| |||| || ||||||||| || ||||||||||| ||||||| ||||||||||||||||| ||||| |||||    
T  45126918 ggggtccagattaccacatgccagaattttatgtgggtgtaaagggtgtattgccacatggagtggtacatgtatcaccactc 45126836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 20 - 203
Target Start/End: Complemental strand, 47191115 - 47190933
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| |||||||||||| |  ||||||||| ||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  47191115 acatgaacaccctttattcctacacctcattgtacac-ccatgtattagagatattttgataagttcatctcacaaccacactttatcttctatttgtgt 47191017  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    ||||||||  || |||| ||||||||||||||| ||||||||||| ||||||| |||||||| |||||||| ||||||||||||    
T  47191016 ggggtccaagttaccacatgtcagaattttgtgtgggtgtaaagggtgtattgccacatggaatggtacatgtatcatcactct 47190933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 20 - 203
Target Start/End: Original strand, 36150140 - 36150323
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||| ||| ||||||| |||| || ||| ||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  36150140 acatgaataccctttattcatacaccccattatacaccctatgtatcagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgt 36150239  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    || |||||| ||||||||||||||||||||||| || |||||||| ||||||| ||||||| ||||||||| ||||| ||||||    
T  36150240 ggagtccaggttgccacgtgtcagaattttgtgtggatgtaaagggtgtattgccacatggggtggtacatgtatcaccactct 36150323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 40480759 - 40480941
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| ||||||| ||   || ||||||||  | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  40480759 acatgaacaccctttattcatatgccccattgtacatcctatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgt 40480858  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactc 202  Q
     |||||||| ||||||||||||||||||||||| ||||||||||| ||||||| | ||||| ||| ||||| |||||||||||    
T  40480859 agggtccaggttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccgcatggggtgatacatgtatcatcactc 40480941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 53581948 - 53581766
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||  ||||||| ||||  | ||||||||  | ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  53581948 acatgaacactctttattcatacactccattgtacatcctatgtattagggatattttgataagttcatctcacaaccacactttatcttctatttgtgt 53581849  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactc 202  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||| ||||||| ||||| | ||||||||  |||||||||||    
T  53581848 ggggtccaggttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatagggtggtacaggtatcatcactc 53581766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 42100698 - 42100880
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| |||||||||||| |  ||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||    
T  42100698 acatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacattttatcttttatttgtgt 42100797  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactc 202  Q
    || || ||| |||||||||||||||||||| || ||||||||||| || |||| ||||||  ||||||||| ||| |||||||    
T  42100798 ggagttcaggttgccacgtgtcagaattttatgtgggtgtaaagggtgcattgccacatgaggtggtacatgtatgatcactc 42100880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 60 - 205
Target Start/End: Original strand, 52629878 - 52630023
Alignment:
Q  60 atgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgtgcgggtgt 159  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||| |||| |||||||||||||||||| ||||||    
T  52629878 atgtattaaggatatttttgtaagttcatctcacaaccacactttatcttctatttatgtagggtccaggttgctacgtgtcagaattttgtgtgggtgt 52629977  T
Q  160 aaaggatgtattgtcacatggagtggtacatatatcatcactctaa 205  Q
    ||||| ||||||| ||||||| ||||||||| ||||||||||||||    
T  52629978 aaagggtgtattgccacatggggtggtacatgtatcatcactctaa 52630023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 152
Target Start/End: Original strand, 27748573 - 27748705
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||||||||||| |||| |  ||| |||||   |||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||    
T  27748573 acatgaacaccttttattcatacacctcattatacaccttatgtattagggatattttggtaagttcatctcacaacaatactttatcttctatttgtgt 27748672  T
Q  120 ggggtccagattgccacgtgtcagaattttgtg 152  Q
    ||||||||| ||||||| |||||||||||||||    
T  27748673 ggggtccaggttgccacatgtcagaattttgtg 27748705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 20 - 203
Target Start/End: Original strand, 1078237 - 1078411
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| ||||||||| || |  |||||||||   |||||||||| ||||||| ||| |||||||||||||        ||||||||||||||||    
T  1078237 acatgaacaccctttattcctgcacctcattgtacacctaatgtattagg-atatttttgtaggttcatctcacaa--------tatcttctatttgtgt 1078327  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    || || ||| ||||||||||||||||||||||| || |||||||| ||||||| ||||||  ||||||||| ||||||||||||    
T  1078328 ggagttcaggttgccacgtgtcagaattttgtgtggatgtaaagggtgtattgccacatgaggtggtacatgtatcatcactct 1078411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 22 - 152
Target Start/End: Complemental strand, 53273772 - 53273642
Alignment:
Q  22 atgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgtgg 121  Q
    ||||||| | |||||||||| | |  ||||||||  |||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||| |||||    
T  53273772 atgaacatcatttattcctatacctcattgtacatcccatgtattagggatattttggtaagttcatctcacaaccatactttatcttttatttatgtgg 53273673  T
Q  122 ggtccagattgccacgtgtcagaattttgtg 152  Q
    | ||||| || |||||| |||||||||||||    
T  53273672 gatccaggttaccacgtatcagaattttgtg 53273642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 151
Target Start/End: Original strand, 51249357 - 51249449
Alignment:
Q  59 catgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgt 151  Q
    |||| |||| ||||||||| |||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  51249357 catgcattaaggatattttggtaaattcatctcacaaccacactttctcttctatttgtgtgggatccagattgccacatgtcagaattttgt 51249449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 177
Target Start/End: Complemental strand, 11064810 - 11064655
Alignment:
Q  22 atgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgtgg 121  Q
    ||||||| | ||||||| |||| |  ||||||||| | |||  |||| ||||||||  | | ||||||||| || |||||||  ||||||||||||||||    
T  11064810 atgaacatcatttattcatacacctcattgtacaccctatgctttagagatattttgattaattcatctcataatcacacttactcttctatttgtgtgg 11064711  T
Q  122 ggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcaca 177  Q
    |||| ||||| |||| ||||| ||||||||| |||||||| || ||||||||||||    
T  11064710 ggtctagattaccacatgtcaaaattttgtgtgggtgtaaggggtgtattgtcaca 11064655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 10457982 - 10457893
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    |||||||||||||||| || |||| |||||||||||| ||||| |||| ||||||||| |||| || |||||||||||| ||||| ||||    
T  10457982 acatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaatttatctcacaaccatactttctctt 10457893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 4190355 - 4190266
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    ||||||||||| |||| || |||| ||||||||||||   ||||||||| |||||||| |||| ||||||||||||||| ||||| ||||    
T  4190355 acatgaacaccctttaatcatacaccctattgtacaccttatgtattagagatattttggtaaattcatctcacaaccatactttctctt 4190266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 9434134 - 9434223
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    ||||||||||| |||| || ||||  ||||||||||| ||||| |||||||| ||||| |||| ||||||||||||||| ||||| ||||    
T  9434134 acatgaacaccctttaatcatacactctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctt 9434223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 25996278 - 25996356
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaacca 98  Q
    ||||||||||| |||| || |||||| |||||||||| |||| ||||| ||| ||||| |||| |||||||||||||||    
T  25996278 acatgaacaccctttaatcatacatcttattgtacaccccatatattaaggacattttggtaaattcatctcacaacca 25996356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 51757603 - 51757692
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    |||| |||||| |||| || |||| ||||||||||||  |||| |||| ||| |||||||||| ||||||||||||||| ||||| ||||    
T  51757603 acataaacaccctttaatcatacaccctattgtacacctcatgcattatggacattttagtaatttcatctcacaaccatactttctctt 51757692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 29558322 - 29558232
Alignment:
Q  22 atgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttcta 112  Q
    ||||||||| ||||||| ||||||  ||||||||| | || ||||||| |||| || |||| |||||||||||| |||| ||||| |||||    
T  29558322 atgaacaccctttattcatacatctcattgtacaccctatatattaggaatatattggtaaattcatctcacaatcacattttattttcta 29558232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 109
Target Start/End: Complemental strand, 52628064 - 52627978
Alignment:
Q  23 tgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    |||||||| |||| || |||||||||||||||||  |||| |||| | ||||||| |||| |||||||||||| || ||||| ||||    
T  52628064 tgaacaccctttaatcatacatcctattgtacacctcatgcattaagtatattttggtaaattcatctcacaatcatactttctctt 52627978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 34791839 - 34791928
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    ||||||||||| |||| || |||| | ||||||| ||  |||| |||||||| |||||| ||| ||||||||||||||| ||||| ||||    
T  34791839 acatgaacaccctttaatcatacaccatattgtaaacctcatgcattagggacattttaataatttcatctcacaaccatactttctctt 34791928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 203
Target Start/End: Complemental strand, 29556956 - 29556866
Alignment:
Q  112 atttgtgtggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    ||||||||||||| ||| ||||||| |||||| ||||| |  |||||||||   ||||||| |||||| |||||||||| ||||| ||||||    
T  29556956 atttgtgtggggttcaggttgccacatgtcag-attttatatgggtgtaaattgtgtattgccacatgtagtggtacatgtatcaccactct 29556866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 19148829 - 19148873
Alignment:
Q  60 atgtattagggatattttagtaagttcatctcacaaccacacttt 104  Q
    |||||||||||| |||||||||| || ||||||||| ||||||||    
T  19148829 atgtattagggacattttagtaaatttatctcacaatcacacttt 19148873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 175
Target Start/End: Original strand, 51419389 - 51419433
Alignment:
Q  132 gccacgtgtcagaattttgtgcgggtg-taaaggatgtattgtca 175  Q
    ||||||||||||| ||||||| ||||| |||||||||||||||||    
T  51419389 gccacgtgtcagatttttgtgtgggtgttaaaggatgtattgtca 51419433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 133; Significance: 3e-69; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 20 - 204
Target Start/End: Complemental strand, 24001102 - 24000918
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| ||||||||||||||| ||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  24001102 acatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgt 24001003  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactcta 204  Q
    ||||||||||||||||||||||||||||||||  ||||||||||| ||||||| ||||||  ||||||||| |||||| ||||||    
T  24001002 ggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgtattgccacatgaggtggtacatgtatcattactcta 24000918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 42538521 - 42538339
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| ||||||||||||||| ||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  42538521 acatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgt 42538422  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactc 202  Q
    ||||||||||||||||||||||||||||||||  ||||||||||| ||||||| ||||||  ||||||||| |||||| ||||    
T  42538421 ggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgtattgccacatgaggtggtacatgtatcattactc 42538339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 26 - 199
Target Start/End: Complemental strand, 27393344 - 27393171
Alignment:
Q  26 acaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgtggggtc 125  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  27393344 acaccctttattcctacatcctattgtacactctatgtattagggatatttttgtaagttcatctcacaaccacactttatcttctatttatgtggggtc 27393245  T
Q  126 cagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatca 199  Q
    ||| ||||| | |||||||||||| || ||||||||||||||||||| ||||||| ||||||||| ||||||||    
T  27393244 caggttgcctcatgtcagaattttatgtgggtgtaaaggatgtattgccacatggggtggtacatgtatcatca 27393171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 32029907 - 32029725
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    |||| ||||| ||||||||||||| || ||||||||| |||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||| |||    
T  32029907 acataaacactttttattcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctaacaaccacactttatcttctatttatgt 32029808  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactc 202  Q
    ||||||||  ||||||||||||||||||||||| ||||||||||| ||||||| ||||||| ||||||||| |||||| ||||    
T  32029807 ggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatggggtggtacatgtatcatgactc 32029725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 20 - 205
Target Start/End: Complemental strand, 44417024 - 44416839
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||| | |||||| ||||| |||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  44417024 acatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatctcacaaccacactttatcttctatttgtgt 44416925  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactctaa 205  Q
    ||||||||  |||||||||||||||| |||||| || |||||| | ||||||| ||||||  ||||||||| ||||||||||||||    
T  44416924 ggggtccaagttgccacgtgtcagaaatttgtgtggatgtaaaaggtgtattgccacatgaggtggtacatgtatcatcactctaa 44416839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 20 - 203
Target Start/End: Original strand, 44326188 - 44326371
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    |||| |||||| ||||||| ||||||| |||||||||  ||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||    
T  44326188 acataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatctcacaaccacactttatcatctatttatgt 44326287  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    ||| |||||||||||||||||||||||||| || ||||||||||| ||||||| ||||||| ||||||||| ||||| ||||||    
T  44326288 gggatccagattgccacgtgtcagaattttatgtgggtgtaaagggtgtattgccacatggtgtggtacatgtatcaccactct 44326371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 10573759 - 10573941
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    |||| |||||| ||||||| ||||||||||||||||| |||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||| |||    
T  10573759 acataaacaccctttattcatacatcctattgtacaccccatgtattaggaatattttggtaaattcatctcacaaccacactttatcttctatttatgt 10573858  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactc 202  Q
    |||||| |||||||||| | |||||||||| || ||||||||||||| ||||||||||||  ||||||||| ||||| |||||    
T  10573859 ggggtcaagattgccacatatcagaattttatgtgggtgtaaaggatatattgtcacatgcggtggtacatgtatcaccactc 10573941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 43343714 - 43343532
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||| | |||||| ||||| |||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  43343714 acatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatctcacaaccacactttatcttctatttgtgt 43343615  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactc 202  Q
    ||||||||  |||||||||||||||| |||||| || |||||| | ||||||| ||||||  ||||||||| |||||||||||    
T  43343614 ggggtccaagttgccacgtgtcagaaatttgtgtggatgtaaaaggtgtattgccacatgaggtggtacatgtatcatcactc 43343532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 20 - 210
Target Start/End: Original strand, 45326030 - 45326220
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    |||| |||||||||||||| ||||||  ||||||||| |||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||    
T  45326030 acataaacaccttttattcatacatcacattgtacaccccatatattagggatattttggtaagttcatctcacaatcacactttatcttctatttatgt 45326129  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactctaattaaa 210  Q
    |||||||||| | |||| |||||||||||| || ||||||||| | ||||||||||||||| ||||||||| ||||| |||||| ||||||    
T  45326130 ggggtccagactaccacctgtcagaattttatgtgggtgtaaatggtgtattgtcacatggggtggtacatgtatcaccactcttattaaa 45326220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 20 - 203
Target Start/End: Complemental strand, 5811014 - 5810831
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    |||||| |||| |||||||||||| || ||||||||| | || |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  5811014 acatgaccaccctttattcctacaccccattgtacaccctatatattagggatattttgataagttcatctcacaaccacactttatcttctatttgtgt 5810915  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    ||||||||  ||||||| ||||| ||||||||  ||||||||||| ||||||| ||||||| ||||||||| ||||||||||||    
T  5810914 ggggtccaagttgccacatgtcaaaattttgtatgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactct 5810831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 26898492 - 26898310
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||||||||||| |||| || |||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||    
T  26898492 acatgaacaccttttattcatacacccaattgtacattccatgtattagggatattttggtaagttcatcttacaaccacactttatattctatttgtgt 26898393  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactc 202  Q
    ||||||||| || ||||||||||||||||| || ||||||||| | ||||||| ||||| |  |||||||| ||||| |||||    
T  26898392 ggggtccaggttaccacgtgtcagaattttatgtgggtgtaaaaggtgtattgccacataggatggtacatgtatcaccactc 26898310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 20 - 196
Target Start/End: Original strand, 5015405 - 5015581
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||  |||||| |||||  | |||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  5015405 acatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgt 5015504  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatca 196  Q
    ||||||||  ||||||||||||||||||||||| | ||||||| | ||||||| ||||||| ||||||||| |||||    
T  5015505 ggggtccaagttgccacgtgtcagaattttgtgtgagtgtaaaaggtgtattgccacatggggtggtacatgtatca 5015581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 20 - 203
Target Start/End: Complemental strand, 16180446 - 16180264
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    |||| |||||| |||||||||||| || ||||||||| ||| ||||||   ||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  16180446 acatcaacaccatttattcctacaccc-attgtacaccccacgtattataaatattttggtaaattcatctcacaaccacactttatcttctatttgtgt 16180348  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    ||||||||| ||||||||||||||||||||||| || |||||| | ||||||| ||||||| ||||||||| ||||||||||||    
T  16180347 ggggtccaggttgccacgtgtcagaattttgtgtggatgtaaaaggtgtattgccacatggggtggtacatgtatcatcactct 16180264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 41861684 - 41861868
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtatta--gggatattttagtaagttcatctcacaaccacactttatcttctatttgt 117  Q
    ||||||||||| ||||||| |||| || ||| ||||| | ||||||||  | |||||||| ||||||| |||||||||||||||||||||||||||||||    
T  41861684 acatgaacaccctttattcatacacccaattatacaccctatgtattatagagatattttggtaagtttatctcacaaccacactttatcttctatttgt 41861783  T
Q  118 gtggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactc 202  Q
     |||||||||| ||||||||||||||||||||||  ||||||||||| ||||||| ||||||||||||||||| ||||| |||||    
T  41861784 atggggtccaggttgccacgtgtcagaattttgtatgggtgtaaagggtgtattgccacatggagtggtacatgtatcaccactc 41861868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 20 - 203
Target Start/End: Original strand, 9216312 - 9216494
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| |||||||||| |||||||||||||| ||||| ||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  9216312 acatgaacaccctttattcctatatcctattgtacac-ccatgcattagagatattttggtaagttcatctcacaaccacattttatcttctatttgtgt 9216410  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    |||||  |  ||||| | ||||||||||||||| || |||||| | ||||||||||||||| |||||| |||||||||| ||||    
T  9216411 ggggtttaagttgccgcatgtcagaattttgtgtggatgtaaaaggtgtattgtcacatggggtggtatatatatcatccctct 9216494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 20 - 203
Target Start/End: Original strand, 35069731 - 35069914
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||  |||||||||||| |  |||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  35069731 acatgaacactctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttatgt 35069830  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    | ||||||  |||||||||||||||||||||||  | |||||||||| ||||| ||||| |  |||||||| ||||||||||||    
T  35069831 gaggtccaagttgccacgtgtcagaattttgtgtagatgtaaaggatatattgccacataggatggtacatgtatcatcactct 35069914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 23 - 204
Target Start/End: Original strand, 42972865 - 42973046
Alignment:
Q  23 tgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgtggg 122  Q
    |||||| | ||||||||||||  | |||||||||  ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  42972865 tgaacatcctttattcctacactccattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacattttatcttctatttgtgtggg 42972964  T
Q  123 gtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactcta 204  Q
    |||||  ||||||||||||||||||||||| ||||||||| | ||||||| ||||| |  | |||||| |||||| ||||||    
T  42972965 gtccaagttgccacgtgtcagaattttgtgtgggtgtaaatggtgtattgccacataggatagtacatgtatcattactcta 42973046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 20 - 203
Target Start/End: Complemental strand, 4638289 - 4638106
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||||||||||| ||||  | ||||||||| |||| ||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  4638289 acatgaacaccttttattcatacactcaattgtacaccccatatattatggatattttggtaagttcatctcacaaccatactttatcttctatttgtgt 4638190  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    |||||| || || |||||||||||||| ||||  || |||||||| ||||||||||| | | ||||||||| ||||| ||||||    
T  4638189 ggggtctaggttaccacgtgtcagaatcttgtatggatgtaaagggtgtattgtcacgtagggtggtacatgtatcaccactct 4638106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 48 - 180
Target Start/End: Complemental strand, 38160641 - 38160509
Alignment:
Q  48 attgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaatt 147  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||  ||||||||||||||||||    
T  38160641 attgtacaccccatgtattagggatattttagtaacttcatctcacaactacactttatcttctatttatgtggggtccaagttgccacgtgtcagaatt 38160542  T
Q  148 ttgtgcgggtgtaaaggatgtattgtcacatgg 180  Q
    ||||| |||||||| || ||||||| |||||||    
T  38160541 ttgtgtgggtgtaaggggtgtattgccacatgg 38160509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 177
Target Start/End: Complemental strand, 5194321 - 5194164
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| ||||||| |||| |  ||||||||| | |||| ||| |||||||||  ||| |||||||||||| |||||||  ||||||||||||||    
T  5194321 acatgaacaccatttattcatacacctcattgtacaccctatgttttaaggatattttgataaattcatctcacaatcacacttactcttctatttgtgt 5194222  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcaca 177  Q
    |||||| |||||||||| ||||| ||||||||| |||||||| || ||||||| ||||    
T  5194221 ggggtctagattgccacatgtcaaaattttgtgtgggtgtaagggttgtattgccaca 5194164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 177
Target Start/End: Original strand, 43317453 - 43317610
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| ||||||| |||| |  ||||||||  | |||  |||||||||||||  ||| |||||||||||| |||||||  ||||||||||||||    
T  43317453 acatgaacaccatttattcatacacctcattgtacatcctatgctttagggatattttgataaattcatctcacaatcacacttactcttctatttgtgt 43317552  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcaca 177  Q
    |||||| |||||||||| ||||||||||||||| |||||||| || ||||||| ||||    
T  43317553 ggggtctagattgccacatgtcagaattttgtgtgggtgtaaggggtgtattgccaca 43317610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 23 - 161
Target Start/End: Complemental strand, 24280683 - 24280545
Alignment:
Q  23 tgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgtggg 122  Q
    |||||||| ||||||| |||| |||||| ||||  ||||| | |||  ||||||| |||| |||||||||||| |||||||| |||||||||||||||||    
T  24280683 tgaacaccctttattcatacaccctattctacatcccatgcactagaaatattttggtaaattcatctcacaatcacactttctcttctatttgtgtggg 24280584  T
Q  123 gtccagattgccacgtgtcagaattttgtgcgggtgtaa 161  Q
    |||||  ||||||  | ||||||||||||||| ||||||    
T  24280583 gtccaagttgccatatatcagaattttgtgcgagtgtaa 24280545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 90 - 203
Target Start/End: Complemental strand, 47279744 - 47279631
Alignment:
Q  90 tcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtaca 189  Q
    |||||||||||||||||||||||||| | | || |||||||| |||| | |||||||||| || |||| |||||| |||||||||| ||||  |||||||    
T  47279744 tcacaaccacactttatcttctatttatataggatccagattaccacatatcagaattttatgtgggtataaagggtgtattgtcagatgggatggtaca 47279645  T
Q  190 tatatcatcactct 203  Q
    | ||||| ||||||    
T  47279644 tgtatcaccactct 47279631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 40236929 - 40237007
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaacca 98  Q
    ||||||||||| |||| || ||||||||||||||||| ||||| |||||||| ||||| |||| |||||||||||||||    
T  40236929 acatgaacaccctttaatcatacatcctattgtacaccccatgcattagggacattttggtaatttcatctcacaacca 40237007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 39998418 - 39998475
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatatttt 77  Q
    |||||||||| ||||| || ||||||||||||||||| ||||||||||||||||||||    
T  39998418 acatgaacacattttaatcatacatcctattgtacaccccatgtattagggatatttt 39998475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 31513297 - 31513386
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    ||||||||||  |||| || |||| ||||||||| || ||||| |||| ||||||||| |||| ||||||||||||||| ||||| ||||    
T  31513297 acatgaacactctttaatcatacaccctattgtataccccatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 31513386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 27535321 - 27535232
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    ||||||||||| |||| || ||||  |||||||||||||||||| |||  || ||||| |||| ||||||||||||| | ||||| ||||    
T  27535321 acatgaacaccctttaatcatacactctattgtacactccatgtgttaaagacattttggtaatttcatctcacaactatactttctctt 27535232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 31408723 - 31408634
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    ||||||||||| |||| || ||||  ||||||||||  ||||| |||| ||||||||| |||| ||||| ||||||||| ||||| ||||    
T  31408723 acatgaacaccctttaatcatacactctattgtacatcccatgcattaaggatattttggtaaattcatttcacaaccatactttctctt 31408634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 33384906 - 33384970
Alignment:
Q  45 cctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    ||||||||| |||||||| |||||||| ||||| |||| |||||||||||| || ||||| ||||    
T  33384906 cctattgtatactccatgcattagggacattttggtaaattcatctcacaaacatactttctctt 33384970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 203
Target Start/End: Complemental strand, 27535211 - 27535138
Alignment:
Q  130 ttgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    ||||||| ||||||||||||||| || |||||  ||||||||| |||||||||   ||||| ||||| ||||||    
T  27535211 ttgccacatgtcagaattttgtgtggatgtaagagatgtattgccacatggaggaatacatgtatcaccactct 27535138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 133; Significance: 3e-69; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 20 - 204
Target Start/End: Complemental strand, 2614739 - 2614555
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| ||||||||||||||| ||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  2614739 acatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgt 2614640  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactcta 204  Q
    ||||||||||||||||||||||||||||||||  ||||||||||| ||||||| ||||||  ||||||||| |||||| ||||||    
T  2614639 ggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgtattgccacatgaggtggtacatgtatcattactcta 2614555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 33801479 - 33801663
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||| | |||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33801479 acatgaacatcctttatttctacaccccattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 33801578  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactcta 204  Q
    ||| ||||  ||||||||||||||||||||||| ||||||||||  ||||||| |||||||   |||||||||||||||||||||    
T  33801579 gggatccaagttgccacgtgtcagaattttgtgtgggtgtaaagagtgtattgccacatgggaaggtacatatatcatcactcta 33801663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 20 - 210
Target Start/End: Original strand, 5257005 - 5257195
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    |||| |||||| ||||||| ||||||| ||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||    
T  5257005 acataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatctcacaaccacactttatcttctatttatgt 5257104  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactctaattaaa 210  Q
    |||||| |||||||||| |||||||||||| || ||||||||||| ||||||| ||||||| ||||||||| ||||| |||||||| ||||    
T  5257105 ggggtcaagattgccacatgtcagaattttatgtgggtgtaaagggtgtattgccacatggggtggtacatgtatcaccactctaactaaa 5257195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 18033992 - 18034174
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| ||||||||||||  | ||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18033992 acatgaacaccctttattcctacactccattgtacaccctatgtattagggatatttttgtaagttcatctcacaaccacactttatcttctatttgtgt 18034091  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactc 202  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||| ||||||| || |||| ||||||||| |||||||||||    
T  18034092 ggggtccaggttgccacgtgtcagaattttatatgggtgtaaagggtgtattgccatatggggtggtacatgtatcatcactc 18034174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 41334753 - 41334571
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| ||||||| |||| |  ||| ||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  41334753 acatgaacaccctttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgt 41334654  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactc 202  Q
    ||||||||| ||||||||||||||||||||||  ||||||||||| ||||||| ||||||| ||||||||| ||||| |||||    
T  41334653 ggggtccaggttgccacgtgtcagaattttgtatgggtgtaaagggtgtattgccacatggggtggtacatgtatcaccactc 41334571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 20 - 177
Target Start/End: Original strand, 22512315 - 22512472
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| ||||||||||||  | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  22512315 acatgaacaccctttattcctacactccattgtacactccatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgt 22512414  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcaca 177  Q
    ||||||||  ||||||||||||||||||||||| || |||||||| ||||||| ||||    
T  22512415 ggggtccaagttgccacgtgtcagaattttgtgtggatgtaaagggtgtattgccaca 22512472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 20 - 211
Target Start/End: Original strand, 7617143 - 7617334
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| ||||||| ||||  | ||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  7617143 acatgaacaccctttattcatacactccattatacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttatgt 7617242  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactctaattaaaa 211  Q
    ||| || |  ||| ||| |||||||||||||||  |||||||| | ||||||| ||||||| ||| ||||| |||||||||||| |||||||    
T  7617243 gggatctaagttgtcacatgtcagaattttgtgttggtgtaaaaggtgtattgccacatggggtgatacatgtatcatcactcttattaaaa 7617334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 20 - 196
Target Start/End: Original strand, 38470589 - 38470765
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    |||| |||||| ||||||| ||||| | ||||||||| |||||||||| ||||||||| |||| ||||| |||||| ||||||||||||||||||| |||    
T  38470589 acataaacaccctttattcatacattccattgtacaccccatgtattaaggatattttggtaaattcatttcacaatcacactttatcttctatttatgt 38470688  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatca 196  Q
    |||||||||||| |||||| |||||||||| || ||||||||||| ||||||| || |||  ||||||||| |||||    
T  38470689 ggggtccagattaccacgtatcagaattttatgtgggtgtaaagggtgtattgccatatgaggtggtacatgtatca 38470765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 177
Target Start/End: Complemental strand, 39122522 - 39122366
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||||||||||| ||||||  |||  |||| |||||||||||| ||||||| |||| ||||||||||||| ||||||||||||||||||||||    
T  39122522 acatgaacaccttttattcatacatctaattagacac-ccatgtattaggaatattttggtaaattcatctcacaactacactttatcttctatttgtgt 39122424  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcaca 177  Q
    |||||  || ||||||| ||||||||| ||||| || |||||| ||| ||||||||||    
T  39122423 ggggtttaggttgccacatgtcagaatcttgtgtggatgtaaatgatatattgtcaca 39122366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 203
Target Start/End: Complemental strand, 25915077 - 25914903
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| |||||||||||| |  ||||||||| | |||||||||  ||||||| ||| |||||||||| ||        ||||||||||||||||    
T  25915077 acatgaacaccctttattcctacacctcattgtacacccaatgtattaga-atatttttgtaggttcatctcataa--------tatcttctatttgtgt 25914987  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    ||||||||| ||||||||||||||||||||||| ||||||||| | ||||||| ||||||  ||||||||| ||||||||||||    
T  25914986 ggggtccaggttgccacgtgtcagaattttgtgtgggtgtaaatggtgtattgccacatgaggtggtacatgtatcatcactct 25914903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 39122369 - 39122263
Alignment:
Q  97 cacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatca 196  Q
    ||||||||||||||||||||||||||||  || ||||||| ||||||||| ||||| || |||||| ||| ||||||||||||| ||||||||| |||||    
T  39122369 cacactttatcttctatttgtgtggggtttaggttgccacatgtcagaatcttgtgtggatgtaaatgatatattgtcacatggggtggtacatgtatca 39122270  T
Q  197 tcactct 203  Q
     ||||||    
T  39122269 ccactct 39122263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 32473484 - 32473395
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    ||||||||||| |||| || |||| | ||||||||||  |||| |||||||||||||| |||| ||||||||||||||| ||||| ||||    
T  32473484 acatgaacaccctttaatcatacaccttattgtacaccacatgcattagggatattttggtaatttcatctcacaaccatactttctctt 32473395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 33855133 - 33855068
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagtt 85  Q
    ||||||||||| |||||||||||| || ||||||||| |||||||||||| | ||||| |||||||    
T  33855133 acatgaacaccctttattcctacaccccattgtacaccccatgtattaggaacattttggtaagtt 33855068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 201
Target Start/End: Complemental strand, 32473374 - 32473303
Alignment:
Q  130 ttgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcact 201  Q
    ||||||| ||||||||||||||| ||||||||  | ||||||| |||||||||  |||||| ||||| ||||    
T  32473374 ttgccacatgtcagaattttgtgtgggtgtaagaggtgtattgccacatggaggtgtacatgtatcaccact 32473303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 109
Target Start/End: Original strand, 17208111 - 17208173
Alignment:
Q  47 tattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    |||||||||| ||||| |||| ||| ||||| |||| ||||||||||||||| ||||| ||||    
T  17208111 tattgtacaccccatgcattaaggacattttggtaaattcatctcacaaccatactttctctt 17208173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 20 - 203
Target Start/End: Original strand, 112665 - 112848
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| ||||||||||||| | ||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  112665 acatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgt 112764  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    ||||||||||||||||||||||| ||||||||  ||||||||||| ||||||| ||||||| ||||||||| ||||||||||||    
T  112765 ggggtccagattgccacgtgtcaaaattttgtatgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactct 112848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 132; Significance: 1e-68; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 20 - 203
Target Start/End: Original strand, 19047167 - 19047350
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| ||||||||||||| | ||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  19047167 acatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgt 19047266  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    ||||||||||||||||||||||| ||||||||  ||||||||||| ||||||| ||||||| ||||||||| ||||||||||||    
T  19047267 ggggtccagattgccacgtgtcaaaattttgtatgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactct 19047350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 20 - 203
Target Start/End: Original strand, 30838642 - 30838825
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| |||||| ||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  30838642 acatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgt 30838741  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    ||||||||| |||||||||||||||||||||||  |||||||| | ||||||| ||||||| ||||||||| ||||||||||||    
T  30838742 ggggtccaggttgccacgtgtcagaattttgtgtaggtgtaaaaggtgtattgccacatggggtggtacatgtatcatcactct 30838825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 1750424 - 1750606
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| |||||||||||| || ||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  1750424 acatgaacaccctttattcctacaccccattgtacaccctatgtattagggatatttttgtaagttcatctcacaaccacactttatcttctatttgtgt 1750523  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactc 202  Q
    ||||||||||||||||||||||||||||||||| | ||||||||| ||| ||| ||||||| |||||||| ||||||||||||    
T  1750524 ggggtccagattgccacgtgtcagaattttgtgtgagtgtaaagggtgtgttgccacatggggtggtacaaatatcatcactc 1750606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 20 - 203
Target Start/End: Complemental strand, 43490491 - 43490308
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||    
T  43490491 acatgaacaccctttattcctacatcccattgtacactctatgtattagggatattttggtaagttcatctcataaccacactttatcttctatttatgt 43490392  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    ||||||||||||||||||||||||||||||||  ||||||||||| ||||||| ||||||  ||||||||| || |||||||||    
T  43490391 ggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgtattgccacatgaggtggtacatgtagcatcactct 43490308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 20 - 205
Target Start/End: Complemental strand, 12302343 - 12302158
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| |||||| ||||| || ||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  12302343 acatgaacaccctttatttctacaccccattgtacaccctatgtattagggatatttttgtaagttcatctcacaaccacactttatcttctatttatgt 12302244  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactctaa 205  Q
    ||||||||| || ||| |||||||||||||||| || |||||||||||||||| ||||||| ||| ||||| ||||||| ||||||    
T  12302243 ggggtccaggttaccatgtgtcagaattttgtgtggatgtaaaggatgtattgccacatggggtgatacatgtatcatcgctctaa 12302158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 20 - 204
Target Start/End: Complemental strand, 4764816 - 4764632
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    |||| |||||| |||||||||||| |||||||||||| ||||||||||   ||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  4764816 acatcaacaccatttattcctacaccctattgtacaccccatgtattataaatattttggtaaattcatctcacaaccacactttatcttctatttgtgt 4764717  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactcta 204  Q
    ||||||||| ||||||||||||||||||||||| || |||||| | ||||||| ||||||  ||||||||| |||||||||||||    
T  4764716 ggggtccaggttgccacgtgtcagaattttgtgtggatgtaaaaggtgtattgccacatgaggtggtacatgtatcatcactcta 4764632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 52 - 201
Target Start/End: Complemental strand, 42849916 - 42849768
Alignment:
Q  52 tacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgt 151  Q
    ||||| ||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||    
T  42849916 tacaccccatgtattagggatattttgataagttcatctcacaaccacactttat-ttctatttgtgtggggtccaagttgccacgtgtcagaattttgt 42849818  T
Q  152 gcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcact 201  Q
    | ||||||||||| ||||||| ||||||| ||||||||| ||||||||||    
T  42849817 gtgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcact 42849768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 22 - 202
Target Start/End: Complemental strand, 43335851 - 43335671
Alignment:
Q  22 atgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgtgg 121  Q
    ||||||| | |||||||||||| |  ||||||||  |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||    
T  43335851 atgaacatcatttattcctacacctcattgtacatcccatgtattagggatattttggtaagttcatctcacaactacactttatcttctatttatgtgg 43335752  T
Q  122 ggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactc 202  Q
    | ||||| ||||||||||||||||||||||| || |||||| | | ||||| ||||||| ||||||||| |||||||||||    
T  43335751 gatccaggttgccacgtgtcagaattttgtgtggatgtaaaaggtatattgccacatggggtggtacatgtatcatcactc 43335671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 16096757 - 16096940
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| |||||||||||| || ||| ||||| |||||||||||||||||||| || |||| |||||||||||||||||||||||||| || |||    
T  16096757 acatgaacaccctttattcctacaccccattatacaccccatgtattagggatattttggtgagttaatctcacaaccacactttatcttctacttatgt 16096856  T
Q  120 -ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactc 202  Q
     |||||| |  ||||||||||||||||||||||| ||||||||||| ||||||| ||||||  ||||||||| |||||||||||    
T  16096857 gggggtctaagttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgatgtggtacatgtatcatcactc 16096940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 48 - 169
Target Start/End: Complemental strand, 13780797 - 13780676
Alignment:
Q  48 attgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaatt 147  Q
    ||||||||| ||||  ||||||||||||||  ||| ||||||||||||||||||||| |||||||||| |||||||||||| ||||||| ||||||||||    
T  13780797 attgtacaccccatacattagggatattttgataaattcatctcacaaccacactttctcttctatttatgtggggtccaggttgccacatgtcagaatt 13780698  T
Q  148 ttgtgcgggtgtaaaggatgta 169  Q
    ||||   |||||||||| ||||    
T  13780697 ttgtataggtgtaaagggtgta 13780676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 60 - 204
Target Start/End: Complemental strand, 39149342 - 39149200
Alignment:
Q  60 atgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgtgcgggtgt 159  Q
    ||||||||| |||||||| ||||||||||| |||||| |||||||||||| ||||||||| ||||| | ||| |||||| ||| ||||||||| ||||||    
T  39149342 atgtattagagatattttggtaagttcatcccacaactacactttatcttttatttgtgt-gggtctaaattaccacgtctcataattttgtgtgggtgt 39149244  T
Q  160 aaaggatgtattgtcacatggagtggtacatatatcatcactcta 204  Q
    ||| | ||||||  ||||||| ||||||||| |||||||||||||    
T  39149243 aaaaggtgtattaccacatgg-gtggtacatgtatcatcactcta 39149200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 64 - 197
Target Start/End: Original strand, 42026823 - 42026956
Alignment:
Q  64 attagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgtgcgggtgtaaag 163  Q
    |||||||||||||| | || ||||||||||||| ||||||| | |||||||||||||||||| || |||| |  ||||||||||||||| |||||||| |    
T  42026823 attagggatattttggcaaattcatctcacaactacactttcttttctatttgtgtggggtctaggttgcaagatgtcagaattttgtgtgggtgtaagg 42026922  T
Q  164 gatgtattgtcacatggagtggtacatatatcat 197  Q
    | ||||||| |||||||||  |||||| ||||||    
T  42026923 ggtgtattgccacatggaggtgtacatgtatcat 42026956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 203
Target Start/End: Complemental strand, 34817866 - 34817683
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| |||||||  ||| |  ||||||||| ||||| | || | | ||||| |||| ||||||||||||||||||||| ||||||||||||      
T  34817866 acatgaacaccctttattcacacacctcattgtacaccccatgcactacgcacattttggtaaattcatctcacaaccacactttctcttctatttgtac 34817767  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    ||| ||||| ||||||| ||||||||||||||  |||||||| ||  | |||| ||||||| |  |||||| ||||||||||||    
T  34817766 gggatccaggttgccacatgtcagaattttgtatgggtgtaaggggagcattgccacatgggggtgtacatgtatcatcactct 34817683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 151
Target Start/End: Complemental strand, 8896673 - 8896542
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| |||||||  |||| | ||||||||| | ||  | |||| ||||||| |||| |||||||||||| |||||||| | ||||||||||||    
T  8896673 acatgaacaccctttattcacacattccattgtacaccctatacaataggaatattttggtaaattcatctcacaatcacactttcttttctatttgtgt 8896574  T
Q  120 ggggtccagattgccacgtgtcagaattttgt 151  Q
    | ||| ||| ||||||| ||||||||||||||    
T  8896573 gaggttcaggttgccacatgtcagaattttgt 8896542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 33229311 - 33229396
Alignment:
Q  20 acatgaacacc-ttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacacttt 104  Q
    ||||||||||| ||||||||||||| |  ||||||||| |||||||||||||||||||| |||||||||||  |||| ||||||||    
T  33229311 acatgaacacccttttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatcatacaatcacacttt 33229396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 43114567 - 43114656
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    ||||||||||| |||| || |||| |||||||||||| ||||| |||||||| ||||| |||| ||||||||||||||| ||||| ||||    
T  43114567 acatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctt 43114656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 11825744 - 11825655
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    ||||||||||| |||| || |||| |||||||||||| ||||| |||||||| ||||| |||| |||||||||||| || ||||| ||||    
T  11825744 acatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaatcatactttctctt 11825655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 41282064 - 41281975
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    ||||||||||| |||| || |||| |||||||||||| ||||| |||||||| |||||  ||| ||||||||||||||| ||||| ||||    
T  41282064 acatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttgataatttcatctcacaaccatactttctctt 41281975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 12415550 - 12415461
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    ||||||||||| |||| || |||| | |||||||||| ||||| |||||||| ||||| |||| || |||||||||||| ||||| ||||    
T  12415550 acatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaattttatctcacaaccatactttctctt 12415461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 12427610 - 12427521
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    ||||||||||| |||| || |||| | |||||||||| ||||| |||||||| ||||| |||| || |||||||||||| ||||| ||||    
T  12427610 acatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaattttatctcacaaccatactttctctt 12427521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 16803978 - 16804067
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    ||||||||||| |||| || |||| |||||||||||  ||||| |||||||| |||||  ||| ||||||||||||||| ||||| ||||    
T  16803978 acatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttgataatttcatctcacaaccatactttctctt 16804067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 16843260 - 16843349
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    ||||||||||| |||| || |||| |||||||||||  ||||| |||||||| |||||  ||| ||||||||||||||| ||||| ||||    
T  16843260 acatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttgataatttcatctcacaaccatactttctctt 16843349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 34895831 - 34895742
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    ||||||||||| |||| ||  ||| |||||||||||| ||||| |||||||| || || |||| |||||||||||| || ||||||||||    
T  34895831 acatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcacaatcatactttatctt 34895742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 4299508 - 4299435
Alignment:
Q  22 atgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaa 95  Q
    ||||||||| |||| || |||| |||||||||||||||||| ||||  || ||||| |||| ||||||||||||    
T  4299508 atgaacaccctttaatcatacaccctattgtacactccatgcattaatgacattttggtaaattcatctcacaa 4299435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 109
Target Start/End: Complemental strand, 4452020 - 4451951
Alignment:
Q  40 tacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    |||||| ||||||||||   ||| |||||||||||||| |||| ||||||||||||||| ||||| ||||    
T  4452020 tacatcttattgtacaccatatgcattagggatattttggtaaattcatctcacaaccatactttctctt 4451951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 6518558 - 6518484
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaa 95  Q
    |||||||||||||| || | ||||  ||||||||||| ||||| |||||||| ||||| |||| ||||||||||||    
T  6518558 acatgaacacctttaat-catacactctattgtacaccccatgcattagggacattttggtaatttcatctcacaa 6518484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 7070426 - 7070505
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccac 99  Q
    ||||||||||| ||||||| ||||||| ||||||  |||||| |||| |||| |||||  ||| ||||||| ||||||||    
T  7070426 acatgaacaccctttattcatacatcccattgtaacctccatttattggggacattttgataaattcatcttacaaccac 7070505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 18491715 - 18491798
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactt 103  Q
    ||||||||||| |||| || |||| ||||||||||||  |||| |||| | | ||||| |||| ||||||||||||||| ||||    
T  18491715 acatgaacaccctttaatcatacaccctattgtacacctcatgcattaagaacattttggtaaattcatctcacaaccatactt 18491798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 966924 - 966835
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    ||||||||||| |||| || |||| |||||||||||| ||||| |||| | |  |||| |||| |||||||||||| || ||||| ||||    
T  966924 acatgaacaccctttaatcatacaccctattgtacaccccatgcattaagaacgttttggtaaattcatctcacaaacatactttctctt 966835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 203
Target Start/End: Complemental strand, 12531643 - 12531570
Alignment:
Q  130 ttgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    ||||||| |||||| |||||||| ||||||||  | ||||||| || ||||||  |||||| ||||||||||||    
T  12531643 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccatatggaggtgtacatgtatcatcactct 12531570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 132; Significance: 1e-68; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 20 - 211
Target Start/End: Original strand, 5489786 - 5489977
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| ||||||||||||||| ||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  5489786 acatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgt 5489885  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactctaattaaaa 211  Q
    ||||||||  |||||||||||||||||||| || ||||||||||| ||||||| ||||||| ||||||||| ||||||||||| || |||||    
T  5489886 ggggtccaagttgccacgtgtcagaattttatgtgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactcaaaataaaa 5489977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 43571176 - 43570994
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| |||||||||||| |  ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  43571176 acatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgt 43571077  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactc 202  Q
    ||||||||  |||||||||||||||||||| || ||||||||||| ||||||| ||||||| |||||||||||||||||||||    
T  43571076 ggggtccaagttgccacgtgtcagaattttatgtgggtgtaaagggtgtattgccacatggggtggtacatatatcatcactc 43570994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 20 - 203
Target Start/End: Original strand, 7447836 - 7448018
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||| | ||||||||||||||| ||||||||| ||||||||||  ||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  7447836 acatgaacatcctttattcctacatcccattgtacac-ccatgtattacagatattttgataagttcatctcacaaccacactttatcttctatttgtgt 7447934  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    ||||||||  ||||||||||||||||||||||| ||||||||||| ||||||| |||||||| |||||||| ||||||||||||    
T  7447935 ggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatggaatggtacatgtatcatcactct 7448018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 20 - 207
Target Start/End: Original strand, 4401337 - 4401525
Alignment:
Q  20 acatgaacac-cttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtg 118  Q
    |||||||||| ||||||||||||||    ||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  4401337 acatgaacactcttttattcctacacttcattgtacaccccatgtattagagatattttggtaagttcatctcacaaccacactttatcttctatttgtg 4401436  T
Q  119 tggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactctaatt 207  Q
    |||||||||   |||||||||||||||||||||| ||||||||||| ||||||| ||||| | ||||||||| ||||||||||||||||    
T  4401437 tggggtccaatatgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatagggtggtacatgtatcatcactctaatt 4401525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 21 - 203
Target Start/End: Complemental strand, 24769588 - 24769406
Alignment:
Q  21 catgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgtg 120  Q
    ||||||||||||||||| |||||  | ||||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||    
T  24769588 catgaacaccttttatttctacactccattgtacaccccatgtattagggatattttggtaagttcttatcacaaccacactttatcttctatttgtgtg 24769489  T
Q  121 gggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    |||||||  ||||||||||||||||||||||| || |||||||  ||||||| ||||||| ||||||||| ||||||||||||    
T  24769488 gggtccaagttgccacgtgtcagaattttgtgtggatgtaaagagtgtattgccacatggggtggtacatgtatcatcactct 24769406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 48499052 - 48498870
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||  |||||| |||||  | |||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  48499052 acatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgt 48498953  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactc 202  Q
    ||||||||  |||||||||||||||||||| || ||||||||||| ||||||| ||||||| ||||||||| |||||||||||    
T  48498952 ggggtccaagttgccacgtgtcagaattttatgtgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactc 48498870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 20 - 207
Target Start/End: Complemental strand, 50448350 - 50448163
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||  |||||| |||||  | |||||||||   |||||||||||||||||| |||||||||||| ||||||||| |||||||||||||| |||    
T  50448350 acatgaacactctttatttctacactccattgtacaccttatgtattagggatatttttgtaagttcatcttacaaccacattttatcttctatttttgt 50448251  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactctaatt 207  Q
    ||| ||||  ||||||||||||||||||||||| ||||||||||| ||||||| ||||||| ||||||||| ||||||||||||||||    
T  50448250 gggttccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactctaatt 50448163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 20 - 201
Target Start/End: Original strand, 37814788 - 37814969
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    |||| |||||| ||||||| ||||||  ||||||||| |||||||||| ||||||||| |||| ||||| |||||||||||||||||||||||||| |||    
T  37814788 acataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattttggtaaattcatttcacaaccacactttatcttctatttatgt 37814887  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcact 201  Q
    |||||||||||||||||||||||||||||| |  || |||||||| ||||||| ||||||| ||||||||| ||||| ||||    
T  37814888 ggggtccagattgccacgtgtcagaattttatatggatgtaaagggtgtattgccacatggggtggtacatgtatcaccact 37814969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 23 - 203
Target Start/End: Complemental strand, 750392 - 750212
Alignment:
Q  23 tgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgtggg 122  Q
    |||||||| ||  |||||||| || ||||||||| |||||||| |||||||||||  ||| ||||||||| |||||||||||||||||||||||||||||    
T  750392 tgaacacccttatttcctacaccccattgtacaccccatgtatcagggatattttgataaattcatctcaaaaccacactttatcttctatttgtgtggg 750293  T
Q  123 gtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    |||||  || |||||||||||||||||||| ||||||||||| ||||||| |||||||  |||||||| ||||||||||||    
T  750292 gtccatgttaccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgggatggtacatgtatcatcactct 750212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 20 - 204
Target Start/End: Complemental strand, 2497652 - 2497468
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    |||| |||||| ||||||| ||||| | ||||||||| |||| ||||| ||||||||| ||||||||||||||||||||||||||||| ||||||| |||    
T  2497652 acataaacaccatttattcatacattccattgtacaccccatatattaaggatattttggtaagttcatctcacaaccacactttatcatctatttatgt 2497553  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactcta 204  Q
    ||| ||||||||| |||||||||||||||| || |||| |||||| ||||||| ||||||| ||||||||| ||||| |||||||    
T  2497552 gggatccagattgtcacgtgtcagaattttatgtgggtataaagggtgtattgccacatggtgtggtacatgtatcaccactcta 2497468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 23989614 - 23989431
Alignment:
Q  20 acatgaacacc-ttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtg 118  Q
    ||||||||||| |||||||| ||||  | |||||| || | |||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||    
T  23989614 acatgaacacccttttattcatacactcaattgtataccctatgtattagggatattttggtaaatttatctcacaaccacactttatcttctatttgtg 23989515  T
Q  119 tggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactc 202  Q
    |||||||||| ||||||| ||||||||| ||||| ||||||||||| ||||||| || || | ||||||||| ||||| |||||    
T  23989514 tggggtccaggttgccacatgtcagaatcttgtgtgggtgtaaagggtgtattgccatatagggtggtacatgtatcaccactc 23989431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 58 - 204
Target Start/End: Original strand, 4888091 - 4888236
Alignment:
Q  58 ccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgtgcgggt 157  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||| ||||| ||||||| || ||||||||||||| || |    
T  4888091 ccatgtattagggatattttggtaagtttatctcacaaccacactttattttctatttgtgtggtgtccaaattgccatgtatcagaattttgtgtggat 4888190  T
Q  158 gtaaaggatgtattgtcacatggagtggtacatatatcatcactcta 204  Q
    ||||||||| ||||| ||||||| ||||||||| |||||||||||||    
T  4888191 gtaaaggatatattgccacatgg-gtggtacatgtatcatcactcta 4888236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 45427835 - 45427746
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    ||||||| |||||||| || |||| |||||||||||||||||| |||||||| ||||| |||| ||||||||||||||| ||||| ||||    
T  45427835 acatgaataccttttaatcatacaccctattgtacactccatgcattagggacattttggtaatttcatctcacaaccatactttctctt 45427746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 44112687 - 44112776
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    ||||||||||| |||| || |||| |||||||||||| ||||| |||||||| ||||| |||| ||||||||||||||| ||||| ||||    
T  44112687 acatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctt 44112776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 48119638 - 48119727
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    ||||||||||| |||| || |||| |||||||||||| ||||| |||| ||||||||| |||| ||||||||||||||| ||||| ||||    
T  48119638 acatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 48119727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 35003304 - 35003393
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    ||||||||||| |||| || |||| |||||||||||| ||||  |||| ||||||||| |||| ||||||||||||||| ||||| ||||    
T  35003304 acatgaacaccctttaatcatacaccctattgtacaccccatacattaaggatattttggtaaattcatctcacaaccatactttctctt 35003393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 46168393 - 46168482
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    ||||||||||| |||| || || |||||||||||||| | ||| |||| ||||||||| |||| ||||||||||||||| ||||| ||||    
T  46168393 acatgaacaccctttaatcatatatcctattgtacacccaatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 46168482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 109
Target Start/End: Original strand, 45705837 - 45705924
Alignment:
Q  22 atgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    ||||||||| |||| || ||||| ||||||||||||||||| |||| ||| |||||  ||| ||||||||||||||| ||||| ||||    
T  45705837 atgaacaccctttaatcatacattctattgtacactccatgcattatggacattttgataaattcatctcacaaccatactttctctt 45705924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 35000203 - 35000114
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    |||||||||||||||| || ||||  |||||||| ||| ||||||||||||| |||||  ||| || |||||||||||| ||||| ||||    
T  35000203 acatgaacaccttttaatcatacactctattgtatacttcatgtattagggacattttgataaatttatctcacaaccatactttctctt 35000114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 38335928 - 38336017
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    ||||||||||| |||| || |||| | |||||||||  ||||| |||| ||||||||| |||| ||||||||||||||| ||||| ||||    
T  38335928 acatgaacaccctttaatcatacaccttattgtacatcccatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 38336017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 41065163 - 41065252
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    ||||||||||| |||| || |||| ||| |||||||| ||||| |||||||  ||||| |||| ||||||||||||||| ||||| ||||    
T  41065163 acatgaacaccctttaatcatacaccctgttgtacaccccatgcattaggggcattttggtaatttcatctcacaaccatactttctctt 41065252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 45639822 - 45639733
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    ||||||||||  |||| || ||||||||||||||||| ||||  |||| ||||||||| |||| |||||||||||| || ||||| ||||    
T  45639822 acatgaacactctttaatcatacatcctattgtacaccccatacattaaggatattttggtaaattcatctcacaatcatactttctctt 45639733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 38113283 - 38113202
Alignment:
Q  22 atgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactt 103  Q
    ||||||||| |||| || |||| |||||||||||| ||||| ||||  || ||||| |||| ||||||||||||||| ||||    
T  38113283 atgaacaccctttaatcatacaccctattgtacaccccatgcattaatgacattttggtaaattcatctcacaaccatactt 38113202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 109
Target Start/End: Original strand, 26585499 - 26585561
Alignment:
Q  47 tattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    |||||||||| ||||| |||| |||||||||||||| |||||||| ||| || ||||| ||||    
T  26585499 tattgtacaccccatgcattaaggatattttagtaaattcatctcgcaatcatactttctctt 26585561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 204
Target Start/End: Original strand, 41065271 - 41065345
Alignment:
Q  130 ttgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactcta 204  Q
    ||||||| |||||| ||||||||||| |||||  | ||||||| ||||||| |  |||||||||||| |||||||    
T  41065271 ttgccacatgtcaggattttgtgcggatgtaagaggtgtattgccacatgggggtgtacatatatcaccactcta 41065345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 203
Target Start/End: Complemental strand, 38113175 - 38113102
Alignment:
Q  130 ttgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    ||||||| |||||| |||||||| ||||||||  | |||||||||||||||||  ||||||  |||| ||||||    
T  38113175 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgtcacatggaggtgtacatgaatcaccactct 38113102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 203
Target Start/End: Original strand, 44112797 - 44112870
Alignment:
Q  130 ttgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    ||||||| ||||||||||||||| ||||||||  | ||||||| |||||| ||  |||||| ||||| ||||||    
T  44112797 ttgccacatgtcagaattttgtgtgggtgtaagaggtgtattgccacatgaaggtgtacatgtatcaccactct 44112870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 7740825 - 7740757
Alignment:
Q  111 tatttgtgtggggtccagattgccacgtgtcagaattttgtgcgggtgt-aaaggatgtattgtcacat 178  Q
    ||||||||||||||||| || ||||||||||| | |||| ||  ||||| || ||||||||||||||||    
T  7740825 tatttgtgtggggtccacatagccacgtgtcatatttttatgtaggtgtcaatggatgtattgtcacat 7740757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 126; Significance: 4e-65; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 32 - 205
Target Start/End: Original strand, 23036002 - 23036175
Alignment:
Q  32 tttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagatt 131  Q
    |||||||||||| |||||||||||| | || ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  23036002 tttattcctacaccctattgtacaccctatatattagggatatttttgtaagttcatctcacaaccacactttatcttctatttatgtggggtccaggtt 23036101  T
Q  132 gccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactctaa 205  Q
    ||||||||||||||||||||| ||||||||||||||| ||| ||||||| ||||||||| ||||||||||||||    
T  23036102 gccacgtgtcagaattttgtgtgggtgtaaaggatgtgttgccacatggggtggtacatgtatcatcactctaa 23036175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 33703151 - 33703333
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| |||||| ||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  33703151 acatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgc 33703250  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactc 202  Q
    ||| ||||  ||||||||||||||||||||||| ||||||||||| ||||||| || |||| ||||||||| |||||||||||    
T  33703251 gggatccaagttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccatatggggtggtacatgtatcatcactc 33703333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 35017743 - 35017924
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| |||||||||| |||  ||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  35017743 acatgaacaccctttattcctatatctcattgtacaccccatgtat-agggatattttggtaagttcatctcacaaccacactttatcttctatttgtgt 35017841  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactc 202  Q
    ||||||||  ||||||||||||||||||||||| || |||||| ||||||||| ||||||| ||||||||| |||||||||||    
T  35017842 ggggtccaagttgccacgtgtcagaattttgtgtggatgtaaaagatgtattgccacatggggtggtacatgtatcatcactc 35017924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 20 - 203
Target Start/End: Complemental strand, 1771356 - 1771173
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| |||||||||||| || ||||||||| ||||||||||| ||||||||  ||||||||||||||||||||| |||||||||||||| |||    
T  1771356 acatgaacaccctttattcctacaccccattgtacaccccatgtattagagatattttgataagttcatctcacaaccacattttatcttctatttatgt 1771257  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    ||||||||  ||||||||| ||||||||||||| ||||||||||| ||||||| ||||||| ||||||||| ||||||||||||    
T  1771256 ggggtccaagttgccacgtctcagaattttgtgtgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactct 1771173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 20 - 203
Target Start/End: Original strand, 27550319 - 27550502
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| |||||| |||||  | |||||||||  ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||    
T  27550319 acatgaacaccctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatcttacaaccacactttatcttctatttatgt 27550418  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    ||||||||| ||||||||||||||||||||||  ||||||||||| ||||||| ||||||| ||||||||| ||||||||||||    
T  27550419 ggggtccaggttgccacgtgtcagaattttgtatgggtgtaaagggtgtattgccacatggggtggtacatgtatcatcactct 27550502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 20 - 207
Target Start/End: Complemental strand, 27893932 - 27893745
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    |||| |||||| ||||||| ||||||| ||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||    
T  27893932 acataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatctcacaaccacactttatcttctatttatgt 27893833  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactctaatt 207  Q
    |||||| |||||||||| |||||||||||| || ||||||||||| ||||||| ||||||| ||||||||| ||||| ||||| ||||    
T  27893832 ggggtcaagattgccacatgtcagaattttatgtgggtgtaaagggtgtattgccacatggggtggtacatgtatcaccactccaatt 27893745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 20 - 203
Target Start/End: Complemental strand, 28982912 - 28982729
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| |||||| ||||| |||||||||||  |||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  28982912 acatgaacaccctttatttctacaccctattgtacatcccatatattagggatattttggtaagttcatctcacaaccgcactttatcttctatttgtgt 28982813  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    ||||||||  ||||||||||||||||||||||| || |||||| | ||||||| ||||||| ||||||||| ||||||||||||    
T  28982812 ggggtccaagttgccacgtgtcagaattttgtgtggatgtaaaaggtgtattgccacatggggtggtacatgtatcatcactct 28982729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 20 - 203
Target Start/End: Complemental strand, 55966436 - 55966253
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    |||| |||||| ||||||| ||||||| ||||||||  |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |||    
T  55966436 acataaacaccctttattcatacatcccattgtacatcccatgtattagggatattttggtaagttcatctcacaaccacaatttatcttctatttatgt 55966337  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    |||||| |||||||||| |||||||||||| || ||||||||||| ||||||| ||||||||||||||||| ||||| ||||||    
T  55966336 ggggtctagattgccacctgtcagaattttatgtgggtgtaaagggtgtattgccacatggagtggtacatgtatcaccactct 55966253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 25051703 - 25051885
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||  |||||||||||| || ||||||||| | |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||    
T  25051703 acatgaacacactttattcctacaccccattgtacaccctatgtattagggatattttggtaagttcatctcacaatcacactttatcttctatttatgt 25051802  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactc 202  Q
    ||||||||  ||||||||||||||||||||||| || |||||| ||||||||| ||| ||| ||||||||| |||||||||||    
T  25051803 ggggtccaagttgccacgtgtcagaattttgtgtggatgtaaatgatgtattgccacgtggggtggtacatgtatcatcactc 25051885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 43514776 - 43514594
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| ||||||||||||  | |||||||||| |||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||    
T  43514776 acatgaacaccctttattcctacactccattgtacacttcatgtattagggttattttggtaagttcatctcacaaccacaccttatcttctatttgtgt 43514677  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactc 202  Q
    |||||| || |||||||||||||||||||| || || |||||||  ||||||| ||||||| ||||||||| |||||||||||    
T  43514676 ggggtctaggttgccacgtgtcagaattttttgtggatgtaaagagtgtattgccacatggggtggtacatgtatcatcactc 43514594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 20 - 203
Target Start/End: Original strand, 27864574 - 27864757
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    |||| |||||| ||||||| ||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||    
T  27864574 acataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttattttctatttatgt 27864673  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    ||||| |||||| |||| |||||||||||| || || |||||||| ||||||| ||||||| ||||||||| ||||| ||||||    
T  27864674 ggggttcagattaccacatgtcagaattttatgtggatgtaaagggtgtattgccacatggggtggtacatgtatcaccactct 27864757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 23204868 - 23204686
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||  ||||||||||||||| ||||||||  | |||||||||||||||||| |||||||||| |||||||||||||||||||||||||| |||    
T  23204868 acatgaacactctttattcctacatcccattgtacatcctatgtattagggatatttttgtaagttcatgtcacaaccacactttatcttctatttatgt 23204769  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactc 202  Q
    ||||||||| ||||||| |||||||||||| || ||||||||||||| ||||| |||||||  |||||| | |||||||||||    
T  23204768 ggggtccaggttgccacatgtcagaattttatgtgggtgtaaaggatatattgccacatgggatggtacgtgtatcatcactc 23204686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 39631120 - 39631271
Alignment:
Q  29 ccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgtggggtccag 128  Q
    ||||||||||||||| |  |||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||     
T  39631120 ccttttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgtggggttcaa 39631219  T
Q  129 attgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatgg 180  Q
      || ||||||||||||||||||| |||||||||||||||||||||||||||    
T  39631220 tatgtcacgtgtcagaattttgtgtgggtgtaaaggatgtattgtcacatgg 39631271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 206
Target Start/End: Original strand, 31680917 - 31681098
Alignment:
Q  25 aacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgtggggt 124  Q
    |||||| ||||||| ||||| | ||||||||| || | ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  31680917 aacaccatttattcatacattccattgtacaccccgtatattagggatattttggtaagttcatctcacaaccacactttatcttctatttatgtggggt 31681016  T
Q  125 ccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactctaat 206  Q
      ||||||||||||||||||||||| ||  |||||||||| ||||||| |||||||  || ||||| ||||| |||||||||    
T  31681017 ttagattgccacgtgtcagaattttatgtaggtgtaaagggtgtattgccacatgggatgctacatgtatcaccactctaat 31681098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 20 - 203
Target Start/End: Original strand, 43735752 - 43735935
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||| | ||||||||||||||  ||| |||| |||||||||||| ||||||||  |||||||||||||||| |||||||||||||||||||||||    
T  43735752 acatgaacatcctttattcctacatctcattatacattccatgtattagagatattttgataagttcatctcacaatcacactttatcttctatttgtgt 43735851  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    ||| ||||  ||| |||||||||||||||| || || |||||||| ||||||| ||| ||| ||||||||| ||||||||||||    
T  43735852 gggatccaagttgtcacgtgtcagaattttatgtggatgtaaagggtgtattgccacgtggggtggtacatgtatcatcactct 43735935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 43949892 - 43949709
Alignment:
Q  20 acatgaacacc-ttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtg 118  Q
    ||||||||||| |||||||||| || |  ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  43949892 acatgaacacccttttattcctgcacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtg 43949793  T
Q  119 tggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactc 202  Q
     ||| ||||   |||||||||||||||||||||  |||| |||||| ||||||| || || | ||||||||| |||||||||||    
T  43949792 cgggatccaatatgccacgtgtcagaattttgtatgggtataaagggtgtattgccaaatagggtggtacatgtatcatcactc 43949709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 20 - 196
Target Start/End: Complemental strand, 48463540 - 48463364
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    |||| |||||| ||||||| |||||   ||||||||  |||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||| |||    
T  48463540 acataaacaccatttattcatacatttcattgtacatcccatgtattagggatattttggtaagttcatctcacaaccatactttattttctatttatgt 48463441  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatca 196  Q
    ||||| |||||| |||| |||||||||||| || ||||||||||| ||||||| ||||| ||||||||||| |||||    
T  48463440 ggggttcagattaccacatgtcagaattttatgtgggtgtaaagggtgtattgccacatagagtggtacatgtatca 48463364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 20 - 178
Target Start/End: Complemental strand, 45490403 - 45490245
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    |||||||||| |||||||  ||||||| |||||||||  ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||      
T  45490403 acatgaacacattttatttatacatccaattgtacacctcatgtattagggatactttagtaaattcatctcacaaccacactttatcttctatttgtac 45490304  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacat 178  Q
    ||| ||||| ||||||||||||||||| ||||| ||||||||| ||| ||||| |||||    
T  45490303 gggatccaggttgccacgtgtcagaatcttgtgtgggtgtaaatgatatattgccacat 45490245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 52 - 202
Target Start/End: Complemental strand, 51512323 - 51512173
Alignment:
Q  52 tacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgt 151  Q
    ||||| ||||||||||| |||||||| |||||||||||| | |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  51512323 tacaccccatgtattagagatattttggtaagttcatcttataaccacactttatcttttatttgtgtggggtccaggttgccacgtgtcagaattttgt 51512224  T
Q  152 gcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactc 202  Q
    | |||| | || ||||||||| ||| ||| ||||||||| |||||||||||    
T  51512223 gtgggtattaaagatgtattgccacgtggggtggtacatgtatcatcactc 51512173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 22 - 202
Target Start/End: Original strand, 12496968 - 12497148
Alignment:
Q  22 atgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgtgg 121  Q
    ||||||||| ||||||||||||  | ||||||||  ||||||||||| |||||||| |||||||||||| |||| ||||||||||||||||||||||||     
T  12496968 atgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagttcatcttacaatcacactttatcttctatttgtgtga 12497067  T
Q  122 ggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactc 202  Q
    ||| ||  ||||||||||| ||||||||||| |||||||||   ||||||||||||||| ||||| ||| |||||| ||||    
T  12497068 ggttcaatttgccacgtgttagaattttgtgtgggtgtaaaacgtgtattgtcacatggggtggtgcatgtatcattactc 12497148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 24 - 204
Target Start/End: Complemental strand, 27316799 - 27316618
Alignment:
Q  24 gaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgtgggg 123  Q
    ||||||| |||||||||||| |  ||| ||||| |||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||| | ||| |    
T  27316799 gaacaccctttattcctacacctcattatacaccccatgtattaaggatattttggtaagttcatctcataaccacactttatcttctatttatttggag 27316700  T
Q  124 tccagattgccacgtgtcagaa-ttttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactcta 204  Q
    ||||  |||||||||||||||| ||||||| || |||||||| |||||||||||||||  || || || |||||||||||||    
T  27316699 tccaagttgccacgtgtcagaatttttgtgtggatgtaaagggtgtattgtcacatgggatgataaatgtatcatcactcta 27316618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 60 - 203
Target Start/End: Original strand, 21687056 - 21687199
Alignment:
Q  60 atgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgtgcgggtgt 159  Q
    |||||||||  |||||||||||||||||||||| ||||| |||||||||||||||||| ||| || ||| ||||||||||||||||||||||| |  |||    
T  21687056 atgtattagaaatattttagtaagttcatctcataaccatactttatcttctatttgtctggagttcaggttgccacgtgtcagaattttgtgtgaatgt 21687155  T
Q  160 aaaggatgtattgtcacatggagtggtacatatatcatcactct 203  Q
    |||| |||||||| ||||| |  |||||||||||||||||||||    
T  21687156 aaagaatgtattgccacataggttggtacatatatcatcactct 21687199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 20 - 163
Target Start/End: Original strand, 41878416 - 41878559
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||  ||||||| |||| |  ||||||||| | ||  ||||||||||||||  ||||||||||||||||||| || || ||||||||||||||    
T  41878416 acatgaacactctttattcatacacctcattgtacaccctatccattagggatattttgataagttcatctcacaaccaaaccttctcttctatttgtgt 41878515  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaag 163  Q
    ||||||||||||| |||||||||||||||||||  |||||||||    
T  41878516 ggggtccagattgtcacgtgtcagaattttgtgttggtgtaaag 41878559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 151
Target Start/End: Original strand, 28988483 - 28988614
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| ||||||| |||| |  ||||||||| ||||| | |||||| |||||  ||| ||||||||| ||||||||||| ||||||||||||||    
T  28988483 acatgaacaccctttattcatacacctcattgtacaccccatgcactagggacattttgataaattcatctcataaccacactttctcttctatttgtgt 28988582  T
Q  120 ggggtccagattgccacgtgtcagaattttgt 151  Q
    ||||||||| ||||||  ||||||||||||||    
T  28988583 ggggtccaggttgccatatgtcagaattttgt 28988614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 193
Target Start/End: Complemental strand, 46412516 - 46412386
Alignment:
Q  63 tattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgtgcgggtgtaaa 162  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||||||||| ||||||||  | ||||||||||||||||||||||||  | ||||||    
T  46412516 tattagagatattttggtaagttcttctcacaaccacactttatcttctatttatgtggggtttaaattgccacgtgtcagaattttgtgtagatgtaaa 46412417  T
Q  163 ggatgtattgtcacatggagtggtacatata 193  Q
       | |||||||| || | ||||||||||||    
T  46412416 aagtatattgtcatatagggtggtacatata 46412386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 180
Target Start/End: Original strand, 41848009 - 41848141
Alignment:
Q  48 attgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaatt 147  Q
    ||||||||| ||||| ||||| || ||||| | || |||||| |||||||||||||| ||||||||||||||||||| ||||||| ||| ||||||||||    
T  41848009 attgtacaccccatgcattagagacattttggcaaattcatcgcacaaccacactttctcttctatttgtgtggggttcagattgtcacatgtcagaatt 41848108  T
Q  148 ttgtgcgggtgtaaaggatgtattgtcacatgg 180  Q
    ||| | || ||||| || ||||||| |||||||    
T  41848109 ttgcgtggatgtaaggggtgtattgccacatgg 41848141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 17619242 - 17619153
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    |||||||||||||||| || |||| |||||||||||| ||||| |||| ||||||||| |||| ||||||||||||||| ||||| ||||    
T  17619242 acatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 17619153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 213
Target Start/End: Complemental strand, 56215943 - 56215795
Alignment:
Q  64 attagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgtgcgggtgtaaag 163  Q
    ||||| |||||||| | || || |||||||||||||||||| ||| |||||||||||||||| || |||| |  ||||||||||||||| ||||||||      
T  56215943 attagcgatattttggaaaatttatctcacaaccacactttctct-ctatttgtgtggggtctaggttgctatatgtcagaattttgtgtgggtgtaaga 56215845  T
Q  164 gatgtattgtcacatggagtggtacatatatcatcactctaattaaaata 213  Q
    | ||||| | ||||||| |  |||||| ||||| |||||||| |||||||    
T  56215844 ggtgtatggccacatggtggtgtacatgtatcaccactctaaataaaata 56215795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 209
Target Start/End: Complemental strand, 41327580 - 41327444
Alignment:
Q  73 attttagtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattg 172  Q
    ||||| |||| ||||||||||| ||||||||| ||||| ||||||||||||||||| ||||||| ||| |||||||| || | |||||| || |||||||    
T  41327580 attttggtaaattcatctcacatccacactttctcttcaatttgtgtggggtccaggttgccacatgttagaattttttgtgagtgtaaggggtgtattg 41327481  T
Q  173 tcacatggagtggtacatatatcatcactctaattaa 209  Q
     || ||  ||  |||||| |||||  |||||||||||    
T  41327480 ccagattaagatgtacatgtatcactactctaattaa 41327444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 3756336 - 3756252
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacacttt 104  Q
    ||||||||||| |||| || |||| |||||||||||| ||||| |||| |||||||||||||| || ||||||||| || |||||    
T  3756336 acatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttagtaaatttatctcacaatcatacttt 3756252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 711970 - 712059
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    ||||||||||| |||| || |||| |||||||||||| | ||| |||| ||||||||| |||| |||||||||||| || ||||| ||||    
T  711970 acatgaacaccctttaatcatacaccctattgtacaccctatgcattaaggatattttggtaaattcatctcacaaacatactttctctt 712059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 32728367 - 32728456
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    ||||||||| | |||| || |||| |||||||||||| ||||| |||| ||| |||||||||| |||||||||||| || ||||| ||||    
T  32728367 acatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacattttagtaaattcatctcacaatcatactttctctt 32728456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 48435669 - 48435580
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    ||||||||||| |||| ||  ||| |||||||||||| ||||| |||||||| || || |||| |||||||||||| || ||||||||||    
T  48435669 acatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcacaatcatactttatctt 48435580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 55272466 - 55272377
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    ||||||||| | |||| || ||||  ||||||||||| ||||| |||| ||||||||| |||| ||||||||||||||| ||||| ||||    
T  55272466 acatgaacatcctttaatcatacactctattgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 55272377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 35037041 - 35037093
Alignment:
Q  46 ctattgtacactccatgtattagggatattttagtaagttcatctcacaacca 98  Q
    ||||||||||| ||||| |||| ||||||||| |||| |||||||||||||||    
T  35037041 ctattgtacaccccatgcattaaggatattttggtaaattcatctcacaacca 35037093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 202
Target Start/End: Complemental strand, 48435559 - 48435487
Alignment:
Q  130 ttgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactc 202  Q
    ||||||| |||||| |||||||| ||||||||  ||||||||||||||||| |  |||||| ||||| |||||    
T  48435559 ttgccacatgtcaggattttgtgtgggtgtaagagatgtattgtcacatgggggtgtacatgtatcaccactc 48435487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 109
Target Start/End: Original strand, 38851543 - 38851612
Alignment:
Q  40 tacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    |||||| || ||||||||||||| |||| ||| |||||  ||| ||||||||||||||| ||||| ||||    
T  38851543 tacatcataatgtacactccatgcattatggacattttgataaattcatctcacaaccatactttctctt 38851612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 19879989 - 19880053
Alignment:
Q  45 cctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    |||||||||||| |||| ||||| ||| ||||| |||| |||||||||||| || ||||| ||||    
T  19879989 cctattgtacaccccatatattatggacattttggtaaattcatctcacaatcatactttctctt 19880053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 49243966 - 49243934
Alignment:
Q  50 tgtacactccatgtattagggatattttagtaa 82  Q
    ||||||||||||||||||||| |||||||||||    
T  49243966 tgtacactccatgtattaggggtattttagtaa 49243934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 20 - 196
Target Start/End: Original strand, 695 - 871
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| |||||||||||| |  |||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  695 acatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatcttctatttgtgt 794  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatca 196  Q
    || |||||| ||||||||||||||||||||||| ||||||||||| ||||||| ||||||  |||||||||||||||    
T  795 ggagtccaggttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacatgaggtggtacatatatca 871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 14278 - 14097
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| |||||| ||||| || ||||||||  | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  14278 acatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatttttgtaagttcatctcacaaccacactttatcttctatttgtgt 14179  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactc 202  Q
     |||||||| ||||||||||||||||||||||| || |||||||| ||||||| ||||||| ||||||||| |||||||||||    
T  14178 -gggtccaggttgccacgtgtcagaattttgtgtggatgtaaagggtgtattgccacatggggtggtacatgtatcatcactc 14097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 20 - 202
Target Start/End: Complemental strand, 24606 - 24425
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||| |||||| ||||| || ||||||||  | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  24606 acatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatttttgtaagttcatctcacaaccacactttatcttctatttgtgt 24507  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactc 202  Q
     |||||||| ||||||||||||||||||||||| || |||||||| ||||||| ||||||| ||||||||| |||||||||||    
T  24506 -gggtccaggttgccacgtgtcagaattttgtgtggatgtaaagggtgtattgccacatggggtggtacatgtatcatcactc 24425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 11261 - 11443
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgt 119  Q
    ||||||||||  ||||||| |||| || ||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||    
T  11261 acatgaacacactttattcatacaccccattgtacaccccatatattagggatattttggtaagttcatctcacaaccacactttatcttctattgatgt 11360  T
Q  120 ggggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactc 202  Q
    ||||||||  |||| ||||||||||||||||||  ||||||||   ||||||| |||||||  |||||||| |||||||||||    
T  11361 ggggtccaagttgctacgtgtcagaattttgtgtaggtgtaaatagtgtattgccacatgggatggtacatgtatcatcactc 11443  T

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Target: scaffold0157 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 22 - 202
Target Start/End: Complemental strand, 23509 - 23329
Alignment:
Q  22 atgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatcttctatttgtgtgg 121  Q
    ||||||||| ||||||||||||  | ||||||||  ||||||||||| |||||||| |||||||||||| |||| ||||||||||||||||||||||||     
T  23509 atgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagttcatcttacaatcacactttatcttctatttgtgtga 23410  T
Q  122 ggtccagattgccacgtgtcagaattttgtgcgggtgtaaaggatgtattgtcacatggagtggtacatatatcatcactc 202  Q
    ||| ||  ||||||||||| ||||||||||| |||||||||   ||||||||||||||| ||||| ||| |||||| ||||    
T  23409 ggttcaatttgccacgtgttagaattttgtgtgggtgtaaaacgtgtattgtcacatggggtggtgcatgtatcattactc 23329  T

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Target: scaffold0003 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 45809 - 45720
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    ||||||||||| |||| || |||| |||||||||||  | |||||||| ||||||||| |||| ||||||||||||||| ||||| ||||    
T  45809 acatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaaattcatctcacaaccatactttctctt 45720  T

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Target: scaffold0100 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 35546 - 35457
Alignment:
Q  20 acatgaacaccttttattcctacatcctattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 109  Q
    |||| |||||| |||| || |||| | |||||||||| ||||| |||||||| || || |||| ||||||||||||||| ||||| ||||    
T  35546 acataaacaccatttaatcatacaccatattgtacaccccatgcattagggacatattggtaaattcatctcacaaccatactttctctt 35457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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