View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4513_low_85 (Length: 238)
Name: NF4513_low_85
Description: NF4513
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4513_low_85 |
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Alignment Details
Target: chr5 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 40548544 - 40548763
Alignment:
| Q |
1 |
tacatcaaggagagttgttttctctatatggtgataggtttgaaaacaaagtcaaaatcaattggccaaatcaattttcagatgaaaacacggattttga |
100 |
Q |
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| T |
40548544 |
tacatcaaggagagttgttttctctatatggtgataggtttgaaaacaaagtcaaaatcaattggccaaatcaattttcagatgaaaacacggattttga |
40548643 |
T |
|
| Q |
101 |
tatttgtgttcttggtggcagtgctaatggtatactttgtctgagtctctttgacttacatgttcaaacaatcattctgtggaatccaactaccgagaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |
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| T |
40548644 |
tatttgtgttcttggtggcagtgctaatggtatactttgtctgagtctctttgacttacatgttcaaacaatcattttgtagaatccaactaccgagaaa |
40548743 |
T |
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| Q |
201 |
tttaaggccattcctacgac |
220 |
Q |
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|||||||||||||||||||| |
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| T |
40548744 |
tttaaggccattcctacgac |
40548763 |
T |
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