View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4513_low_94 (Length: 221)
Name: NF4513_low_94
Description: NF4513
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4513_low_94 |
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Alignment Details
Target: chr3 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 6285602 - 6285807
Alignment:
| Q |
11 |
catcatcatcttcttctacttcaaaaggtgaacattttggaagaacatgaatatcttcagaaatagatcccatgttttggtttcttttagttt--gagtt |
108 |
Q |
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| T |
6285602 |
catcatcatcttctactacttcaaaaggtgaacattttggaagaacatgaatatcttcagaaatagatcccatgttttggtttcttttagtttttgagtt |
6285701 |
T |
|
| Q |
109 |
tacaatgcatgttggtaacatgcatttatatcatatatgtattgatcttattggtgaaagttattacctatgttgtatatgtttgtctttaagtgtgtga |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6285702 |
tacaatgcatgttggtaacatgcatttatatcatatatgtattgatcttattggtgaaagttattacctatgttgtatatgtttgtctttaagtgtgtga |
6285801 |
T |
|
| Q |
209 |
tgatgt |
214 |
Q |
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|||||| |
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| T |
6285802 |
tgatgt |
6285807 |
T |
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