View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4514-Insertion-3 (Length: 741)

Name: NF4514-Insertion-3
Description: NF4514
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4514-Insertion-3
NF4514-Insertion-3
[»] chr2 (43 HSPs)
chr2 (335-659)||(15354292-15354618)
chr2 (8-114)||(15354886-15354992)
chr2 (174-311)||(15354662-15354799)
chr2 (477-537)||(37357269-37357329)
chr2 (336-408)||(36430855-36430927)
chr2 (336-408)||(39307103-39307175)
chr2 (336-408)||(44544137-44544209)
chr2 (174-294)||(22594984-22595103)
chr2 (339-408)||(3911319-3911388)
chr2 (336-408)||(325546-325618)
chr2 (336-408)||(13118908-13118980)
chr2 (666-741)||(15354229-15354304)
chr2 (335-408)||(22594829-22594902)
chr2 (175-250)||(13507294-13507369)
chr2 (472-535)||(34353261-34353324)
chr2 (336-406)||(2640008-2640078)
chr2 (336-406)||(29943651-29943721)
chr2 (336-402)||(36023685-36023751)
chr2 (336-406)||(36054038-36054108)
chr2 (174-250)||(2640208-2640284)
chr2 (336-392)||(6279779-6279835)
chr2 (174-250)||(36054236-36054312)
chr2 (174-250)||(41515872-41515948)
chr2 (336-408)||(41516074-41516146)
chr2 (336-408)||(13507496-13507566)
chr2 (174-250)||(29943846-29943922)
chr2 (195-250)||(6588296-6588351)
chr2 (470-525)||(15507089-15507144)
chr2 (624-665)||(13507600-13507641)
chr2 (197-250)||(19268628-19268681)
chr2 (181-250)||(40051261-40051330)
chr2 (174-250)||(3911517-3911593)
chr2 (187-285)||(5155746-5155843)
chr2 (174-249)||(6279574-6279649)
chr2 (577-628)||(34353364-34353415)
chr2 (196-250)||(6513323-6513377)
chr2 (188-242)||(13450623-13450677)
chr2 (196-250)||(20212214-20212268)
chr2 (196-250)||(33412997-33413051)
chr2 (196-250)||(34438248-34438302)
chr2 (196-250)||(37909649-37909703)
chr2 (181-250)||(19203860-19203929)
chr2 (174-243)||(44544344-44544413)
[»] chr7 (55 HSPs)
chr7 (175-294)||(39226867-39226985)
chr7 (470-623)||(46777273-46777424)
chr7 (336-408)||(428080-428152)
chr7 (175-294)||(37118374-37118492)
chr7 (471-537)||(36016439-36016505)
chr7 (336-408)||(968741-968813)
chr7 (174-250)||(19503159-19503235)
chr7 (336-408)||(38034965-38035037)
chr7 (335-408)||(15877165-15877238)
chr7 (335-408)||(19503360-19503433)
chr7 (161-250)||(35566998-35567087)
chr7 (174-250)||(15877365-15877441)
chr7 (336-408)||(20883717-20883789)
chr7 (335-406)||(46880108-46880179)
chr7 (339-408)||(24189295-24189364)
chr7 (174-285)||(24203124-24203234)
chr7 (336-408)||(24009087-24009159)
chr7 (174-250)||(29273273-29273349)
chr7 (336-408)||(29982298-29982370)
chr7 (336-408)||(45430254-45430326)
chr7 (336-406)||(27275871-27275941)
chr7 (194-294)||(29982116-29982215)
chr7 (336-406)||(30819544-30819614)
chr7 (336-406)||(39926039-39926109)
chr7 (335-408)||(28501581-28501654)
chr7 (472-533)||(41742417-41742478)
chr7 (336-408)||(29273082-29273154)
chr7 (174-249)||(427877-427952)
chr7 (355-406)||(37118601-37118652)
chr7 (336-406)||(24202959-24203029)
chr7 (466-535)||(41467568-41467637)
chr7 (174-250)||(46879909-46879986)
chr7 (174-250)||(20883915-20883991)
chr7 (174-250)||(24189090-24189166)
chr7 (174-250)||(27276068-27276144)
chr7 (174-250)||(30819740-30819816)
chr7 (336-388)||(31603382-31603434)
chr7 (335-403)||(35566806-35566874)
chr7 (174-226)||(37001038-37001090)
chr7 (336-408)||(37002363-37002435)
chr7 (174-250)||(39925834-39925910)
chr7 (174-250)||(45704540-45704616)
chr7 (175-250)||(45430073-45430148)
chr7 (175-250)||(48900552-48900627)
chr7 (335-377)||(39226741-39226783)
chr7 (188-250)||(46919814-46919875)
chr7 (335-404)||(8294345-8294414)
chr7 (189-250)||(41809490-41809551)
chr7 (174-250)||(38034762-38034838)
chr7 (354-398)||(40602511-40602555)
chr7 (195-250)||(42975186-42975241)
chr7 (347-406)||(45704757-45704816)
chr7 (196-250)||(20438877-20438931)
chr7 (183-233)||(31482680-31482730)
chr7 (189-226)||(8770424-8770461)
[»] chr8 (51 HSPs)
chr8 (471-620)||(32286031-32286178)
chr8 (174-294)||(43460598-43460717)
chr8 (336-408)||(9179031-9179103)
chr8 (336-408)||(2164844-2164916)
chr8 (336-408)||(4471685-4471757)
chr8 (174-250)||(32718994-32719070)
chr8 (336-408)||(36035610-36035682)
chr8 (335-406)||(13197594-13197665)
chr8 (174-294)||(4471483-4471602)
chr8 (336-406)||(7087722-7087792)
chr8 (160-250)||(31940705-31940795)
chr8 (338-403)||(12980114-12980179)
chr8 (335-408)||(43460442-43460515)
chr8 (176-250)||(12980304-12980378)
chr8 (336-406)||(24247529-24247599)
chr8 (336-406)||(31940508-31940578)
chr8 (336-406)||(36496387-36496457)
chr8 (336-406)||(43065166-43065236)
chr8 (189-250)||(40681165-40681226)
chr8 (174-250)||(33628653-33628729)
chr8 (336-387)||(16871807-16871858)
chr8 (339-406)||(33628457-33628524)
chr8 (336-406)||(3642769-3642839)
chr8 (477-535)||(45197180-45197238)
chr8 (470-535)||(7643745-7643810)
chr8 (174-285)||(19725303-19725413)
chr8 (335-408)||(32719194-32719267)
chr8 (174-250)||(9178759-9178835)
chr8 (174-250)||(13197786-13197862)
chr8 (174-250)||(16871604-16871680)
chr8 (336-392)||(45145028-45145084)
chr8 (176-285)||(3642931-3643039)
chr8 (486-525)||(34935159-34935198)
chr8 (194-249)||(36035801-36035856)
chr8 (184-250)||(19718368-19718434)
chr8 (195-294)||(36886222-36886320)
chr8 (577-623)||(40737217-40737263)
chr8 (339-408)||(25698944-25699013)
chr8 (181-250)||(32238227-32238295)
chr8 (189-250)||(43049826-43049887)
chr8 (174-250)||(2165044-2165120)
chr8 (174-250)||(7087917-7087993)
chr8 (174-226)||(36496184-36496236)
chr8 (183-235)||(42444288-42444340)
chr8 (195-250)||(17642364-17642419)
chr8 (187-250)||(24247725-24247788)
chr8 (196-250)||(16323849-16323903)
chr8 (196-250)||(26439584-26439638)
chr8 (378-408)||(35595093-35595123)
chr8 (196-250)||(39347193-39347247)
chr8 (189-235)||(43921436-43921482)
[»] chr4 (70 HSPs)
chr4 (440-533)||(55291236-55291330)
chr4 (482-535)||(27598264-27598317)
chr4 (336-408)||(17616649-17616721)
chr4 (336-408)||(45953744-45953816)
chr4 (335-408)||(34792122-34792195)
chr4 (336-408)||(24346929-24347001)
chr4 (471-535)||(24355818-24355882)
chr4 (336-408)||(27735160-27735232)
chr4 (336-408)||(36187985-36188057)
chr4 (174-250)||(48058767-48058843)
chr4 (178-250)||(55060295-55060367)
chr4 (445-535)||(34360841-34360932)
chr4 (335-408)||(34936791-34936864)
chr4 (335-408)||(56272669-56272742)
chr4 (336-408)||(1182682-1182754)
chr4 (336-408)||(16917311-16917383)
chr4 (174-250)||(30951163-30951239)
chr4 (471-535)||(34650868-34650932)
chr4 (174-250)||(34936594-34936670)
chr4 (336-408)||(48058587-48058659)
chr4 (174-250)||(56272869-56272945)
chr4 (175-250)||(20927732-20927807)
chr4 (336-406)||(22413654-22413724)
chr4 (336-406)||(28013247-28013317)
chr4 (336-406)||(30839486-30839556)
chr4 (336-406)||(52104650-52104720)
chr4 (336-406)||(52760030-52760100)
chr4 (336-406)||(54851135-54851205)
chr4 (174-285)||(22413817-22413927)
chr4 (174-250)||(17616446-17616522)
chr4 (174-250)||(48253980-48254056)
chr4 (336-408)||(48254185-48254257)
chr4 (336-403)||(4540801-4540868)
chr4 (336-387)||(20927555-20927606)
chr4 (178-233)||(25420820-25420875)
chr4 (337-408)||(49144188-49144259)
chr4 (336-406)||(10332729-10332799)
chr4 (336-406)||(23390593-23390663)
chr4 (336-406)||(30951364-30951434)
chr4 (339-405)||(39512752-39512818)
chr4 (336-406)||(46548456-46548526)
chr4 (174-250)||(16917515-16917591)
chr4 (174-250)||(25814420-25814496)
chr4 (336-392)||(25814622-25814678)
chr4 (174-250)||(27734949-27735025)
chr4 (174-250)||(30839282-30839358)
chr4 (174-250)||(40319291-40319367)
chr4 (174-250)||(46564752-46564828)
chr4 (174-250)||(50716504-50716580)
chr4 (174-250)||(52104447-52104523)
chr4 (174-250)||(54851312-54851388)
chr4 (339-405)||(55060487-55060553)
chr4 (181-250)||(43518422-43518491)
chr4 (442-537)||(46405525-46405624)
chr4 (336-376)||(4150369-4150409)
chr4 (174-250)||(23390791-23390867)
chr4 (178-250)||(24347126-24347198)
chr4 (174-250)||(34791919-34791995)
chr4 (174-250)||(36188185-36188261)
chr4 (174-250)||(39512947-39513023)
chr4 (336-392)||(40319105-40319161)
chr4 (174-250)||(45953943-45954019)
chr4 (174-250)||(52759826-52759902)
chr4 (175-226)||(4540597-4540648)
chr4 (184-235)||(30891206-30891257)
chr4 (187-250)||(49143999-49144062)
chr4 (188-250)||(23556136-23556198)
chr4 (174-244)||(28013070-28013140)
chr4 (472-525)||(19655218-19655271)
chr4 (209-250)||(53451772-53451813)
[»] chr3 (46 HSPs)
chr3 (336-408)||(32621432-32621504)
chr3 (175-250)||(19608582-19608657)
chr3 (470-533)||(26141736-26141799)
chr3 (335-408)||(43388384-43388457)
chr3 (336-408)||(8324479-8324551)
chr3 (336-408)||(54910839-54910911)
chr3 (335-408)||(52179195-52179268)
chr3 (174-250)||(41902240-41902316)
chr3 (335-408)||(19608385-19608458)
chr3 (335-408)||(41902040-41902113)
chr3 (181-250)||(52178999-52179068)
chr3 (174-250)||(43744264-43744340)
chr3 (174-250)||(53444833-53444909)
chr3 (335-406)||(40284009-40284080)
chr3 (187-250)||(40284202-40284265)
chr3 (174-294)||(32621587-32621706)
chr3 (336-406)||(47600190-47600260)
chr3 (174-250)||(46948660-46948736)
chr3 (174-250)||(52457987-52458063)
chr3 (174-250)||(54911039-54911115)
chr3 (339-406)||(46948870-46948937)
chr3 (336-406)||(542459-542529)
chr3 (477-535)||(22938532-22938590)
chr3 (336-406)||(41574978-41575048)
chr3 (336-406)||(43744466-43744536)
chr3 (187-249)||(45727081-45727143)
chr3 (336-406)||(54830915-54830985)
chr3 (460-525)||(49366246-49366311)
chr3 (335-387)||(45726899-45726951)
chr3 (174-250)||(54831114-54831190)
chr3 (187-250)||(542655-542718)
chr3 (339-406)||(25558445-25558512)
chr3 (347-406)||(47243778-47243837)
chr3 (477-535)||(3383564-3383622)
chr3 (198-294)||(25592077-25592172)
chr3 (196-294)||(788534-788631)
chr3 (174-250)||(8324679-8324755)
chr3 (174-250)||(25558641-25558717)
chr3 (174-250)||(41574775-41574851)
chr3 (188-248)||(46868540-46868600)
chr3 (345-405)||(27715897-27715959)
chr3 (174-249)||(47599988-47600063)
chr3 (196-250)||(3136553-3136607)
chr3 (174-224)||(47244002-47244052)
chr3 (196-250)||(53516643-53516697)
chr3 (353-406)||(52458199-52458252)
[»] chr1 (43 HSPs)
chr1 (336-408)||(42647489-42647561)
chr1 (466-537)||(3430557-3430627)
chr1 (174-294)||(42647644-42647763)
chr1 (336-408)||(31210711-31210783)
chr1 (336-408)||(36672021-36672093)
chr1 (336-408)||(5800007-5800079)
chr1 (339-407)||(6079837-6079905)
chr1 (336-403)||(43025307-43025374)
chr1 (335-406)||(48354954-48355025)
chr1 (175-250)||(29451055-29451130)
chr1 (181-248)||(29852235-29852302)
chr1 (336-406)||(12979677-12979747)
chr1 (336-406)||(26921917-26921987)
chr1 (336-405)||(33196509-33196578)
chr1 (174-250)||(12979873-12979949)
chr1 (174-250)||(22667304-22667380)
chr1 (336-392)||(28712139-28712195)
chr1 (336-408)||(39628070-39628142)
chr1 (336-387)||(22667505-22667556)
chr1 (336-387)||(41085616-41085667)
chr1 (336-387)||(41090384-41090435)
chr1 (336-406)||(41903190-41903260)
chr1 (336-406)||(45427370-45427440)
chr1 (174-250)||(11444310-11444386)
chr1 (477-537)||(42795382-42795442)
chr1 (175-250)||(33485968-33486043)
chr1 (175-250)||(39627868-39627943)
chr1 (336-387)||(46153473-46153524)
chr1 (336-406)||(11444512-11444582)
chr1 (196-250)||(33098766-33098820)
chr1 (174-285)||(26921715-26921825)
chr1 (336-381)||(46152419-46152464)
chr1 (174-226)||(33196304-33196356)
chr1 (174-250)||(36672220-36672296)
chr1 (184-235)||(2247351-2247402)
chr1 (175-250)||(28711938-28712013)
chr1 (187-250)||(41903386-41903449)
chr1 (176-247)||(47900979-47901049)
chr1 (196-250)||(2620965-2621019)
chr1 (196-250)||(26011003-26011057)
chr1 (174-247)||(5800209-5800282)
chr1 (181-250)||(29953718-29953787)
chr1 (474-535)||(41143793-41143854)
[»] chr5 (36 HSPs)
chr5 (175-250)||(33902124-33902199)
chr5 (336-408)||(14575715-14575787)
chr5 (336-408)||(14721145-14721217)
chr5 (339-408)||(35777627-35777696)
chr5 (174-250)||(43167233-43167309)
chr5 (335-406)||(7456588-7456659)
chr5 (482-535)||(38353676-38353729)
chr5 (174-250)||(231789-231865)
chr5 (336-408)||(15264134-15264206)
chr5 (174-250)||(32092372-32092448)
chr5 (336-408)||(41609178-41609250)
chr5 (336-408)||(43167036-43167108)
chr5 (189-250)||(7456262-7456323)
chr5 (337-406)||(14054505-14054574)
chr5 (175-250)||(36184028-36184102)
chr5 (336-408)||(972241-972313)
chr5 (336-387)||(231612-231663)
chr5 (469-526)||(15311630-15311687)
chr5 (174-250)||(14054704-14054780)
chr5 (185-233)||(21946040-21946088)
chr5 (174-250)||(33654868-33654944)
chr5 (175-250)||(972440-972515)
chr5 (347-406)||(32092175-32092234)
chr5 (335-406)||(36183823-36183894)
chr5 (342-392)||(7456462-7456512)
chr5 (336-381)||(664979-665024)
chr5 (189-250)||(35682385-35682446)
chr5 (174-250)||(14575512-14575588)
chr5 (174-250)||(35777420-35777496)
chr5 (174-250)||(41609376-41609452)
chr5 (195-235)||(41802413-41802453)
chr5 (195-250)||(9913249-9913304)
chr5 (195-250)||(13091204-13091259)
chr5 (195-250)||(29744193-29744248)
chr5 (196-250)||(13795333-13795387)
chr5 (196-250)||(37431411-37431465)
[»] chr6 (27 HSPs)
chr6 (466-622)||(8484631-8484785)
chr6 (339-408)||(2197875-2197944)
chr6 (336-408)||(26611561-26611633)
chr6 (174-294)||(2198030-2198149)
chr6 (336-406)||(5078242-5078312)
chr6 (336-406)||(22734799-22734869)
chr6 (336-406)||(32715699-32715769)
chr6 (174-250)||(3448140-3448216)
chr6 (336-404)||(10091583-10091651)
chr6 (174-250)||(10091778-10091854)
chr6 (477-622)||(10324434-10324579)
chr6 (183-250)||(17697997-17698063)
chr6 (188-250)||(24215306-24215368)
chr6 (336-406)||(33610943-33611013)
chr6 (174-285)||(33610740-33610850)
chr6 (336-392)||(3448487-3448543)
chr6 (178-250)||(22734993-22735065)
chr6 (336-392)||(31394296-31394352)
chr6 (174-250)||(32715894-32715970)
chr6 (196-250)||(30020418-30020472)
chr6 (177-250)||(31394480-31394553)
chr6 (174-250)||(5078438-5078514)
chr6 (198-250)||(6265006-6265058)
chr6 (189-233)||(20469090-20469134)
chr6 (174-250)||(26611759-26611835)
chr6 (181-235)||(27109052-27109106)
chr6 (181-235)||(27150849-27150903)
[»] scaffold0059 (2 HSPs)
scaffold0059 (336-408)||(70935-71007)
scaffold0059 (174-250)||(70733-70809)
[»] scaffold0008 (1 HSPs)
scaffold0008 (336-408)||(263068-263140)
[»] scaffold0190 (1 HSPs)
scaffold0190 (336-408)||(5941-6013)


Alignment Details
Target: chr2 (Bit Score: 133; Significance: 9e-69; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 133; E-Value: 9e-69
Query Start/End: Original strand, 335 - 659
Target Start/End: Complemental strand, 15354618 - 15354292
Alignment:
Q  335 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatatttgtattctnnnnnnnnntacttaaact 434  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||| ||||||         ||||||||||    
T  15354618 gttgaattttgctttgccgacacttttgaaaaataaaatatagttattataattgtaaatgatagaaaatatttttattctaaaaaaaa-tacttaaact 15354520  T
Q  435 attaatttaagggaaatgttaaatagtgctc-cagagcaatgattaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaa 533  Q
    |||||||||||||||||| ||| |||||||| ||||||||||||||| |||| |||||||||||| || |||||||||||||||||||||||||||||||    
T  15354519 attaatttaagggaaatgctaactagtgctctcagagcaatgattaatgaagtaaatatagtaattttacattggaacttgtgcattcaacttctcaaaa 15354420  T
Q  534 gtat---nnnnnnnctgagattttcaacctaaaactttannnnnnnggtttccttaaccattaccctaagggcatcggttaacataacccttaatttaaa 630  Q
    ||||           ||| |||||||||||||||||||         ||||||||||||||| ||||||   ||||||||| ||||| ||||||||||||    
T  15354419 gtataaaaaaaaaaatgatattttcaacctaaaacttt-cttttttagtttccttaaccattgccctaaaaacatcggttagcataatccttaatttaaa 15354321  T
Q  631 tataggtataccggtgcactcgaattttt 659  Q
    |||| ||||||| || ||||| |||||||    
T  15354320 tataagtataccagtacactcaaattttt 15354292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 15354992 - 15354886
Alignment:
Q  8 acgttgtggtaaacataccttctcacctacagcatcatggtagtatatatgaaatgaaaactctaattattggttaatcaaataaagaaggtcaataata 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15354992 acgttgtggtaaacataccttctcacctacagcatcatggtagtatatatgaaatgaaaactctaattattggttaatcaaataaagaaggtcaataata 15354893  T
Q  108 aacaagt 114  Q
    |||||||    
T  15354892 aacaagt 15354886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 174 - 311
Target Start/End: Complemental strand, 15354799 - 15354662
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaat-aaagaactatttgtcgacttttatattttnnnnnnntattatttcctaaga 272  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||    
T  15354799 gtacacctgtttcataaatcaataaattaactatcatttttatgtaataaaagaactatttgtcgacttttatatttt-aaaaaatattatttcctaaga 15354701  T
Q  273 acaaacatcatttaattgtttacattttgtcgaataaaa 311  Q
    |||||||||||||||||||||||||||||||||||||||    
T  15354700 acaaacatcatttaattgtttacattttgtcgaataaaa 15354662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 477 - 537
Target Start/End: Original strand, 37357269 - 37357329
Alignment:
Q  477 ttaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagtat 537  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  37357269 ttaaggaagcaaatatagtaatcttgcattgaaacttgtgcattcaacttctcaaaagtat 37357329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 336 - 408
Target Start/End: Original strand, 36430855 - 36430927
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  36430855 ttgaattttgctttgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 36430927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 336 - 408
Target Start/End: Complemental strand, 39307175 - 39307103
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  39307175 ttgaattttgctttgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 39307103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 336 - 408
Target Start/End: Complemental strand, 44544209 - 44544137
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  44544209 ttgaattttgctttgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 44544137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 174 - 294
Target Start/End: Complemental strand, 22595103 - 22594984
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattttnnnnnnntattatttcctaagaa 273  Q
    ||||| |||||| |||||||||||| ||||| ||||||||||||||| ||| | |||||||||||||||||||||||       ||||||||| ||||||    
T  22595103 gtacatctgtttcataaatcaataagttaacgatcatttttatgtaaaaaaaagctatttgtcgacttttatatttt-agaaaatattatttcataagaa 22595005  T
Q  274 caaacatcatttaattgttta 294  Q
     ||| ||||||| ||||||||    
T  22595004 aaaatatcatttcattgttta 22594984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 339 - 408
Target Start/End: Complemental strand, 3911388 - 3911319
Alignment:
Q  339 aattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    ||||||||||||||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  3911388 aattttgctttgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 3911319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 336 - 408
Target Start/End: Complemental strand, 325618 - 325546
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||||||||||||||||||||| || ||||||| | ||||||||||  |||||||||||||||||||    
T  325618 ttgaattttgctttgccgacacttttgaaaaataaaataaaattattataattataaatgatagaaaatattt 325546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 336 - 408
Target Start/End: Complemental strand, 13118980 - 13118908
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||||||||||||||||||||| || ||||||| | ||||||||||  |||||||||||||||||||    
T  13118980 ttgaattttgctttgccgacacttttgaaaaataaaataaaattattataattataaatgatagaaaatattt 13118908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 666 - 741
Target Start/End: Complemental strand, 15354304 - 15354229
Alignment:
Q  666 cactcgaattttttgagtgcaccgtaaaaattgcctttttatatatatcaacatagttagcttctgttaaaaataa 741  Q
    ||||| ||||||| || | |||| || ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15354304 cactcaaatttttcgaatacaccttagaaattacctttttatatatatcaacatagttagcttctgttaaaaataa 15354229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 335 - 408
Target Start/End: Complemental strand, 22594902 - 22594829
Alignment:
Q  335 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||||||| ||| ||| ||||||||| |||||||| ||||||||||| |||||| |||||||||||||    
T  22594902 gttgaattttgcttcgccaacatttttgagaaataaaatattgttattataattgtaaataatagaaaatattt 22594829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 13507294 - 13507369
Alignment:
Q  175 tacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    ||||||| ||| |||||||||||| ||||  |||||||||||||||||||||  ||||| ||||||||||||||||    
T  13507294 tacacctatttcataaatcaataagttaatgatcatttttatgtaataaagagatatttatcgacttttatatttt 13507369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 472 - 535
Target Start/End: Original strand, 34353261 - 34353324
Alignment:
Q  472 aatgattaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagt 535  Q
    |||| |||||||| ||||||||||||| |||||||| ||||||||||||||||| |||||||||    
T  34353261 aatggttaaggaaccaaatatagtaattttgcattgaaacttgtgcattcaactcctcaaaagt 34353324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 336 - 406
Target Start/End: Complemental strand, 2640078 - 2640008
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    |||||||||| |||||||||||||||||||| ||||||||| |||||||||| ||||   |||||||||||    
T  2640078 ttgaattttgatttgccgacacttttgagaaataaaatataattattataattgtaaccaatagaaaatat 2640008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 336 - 406
Target Start/End: Complemental strand, 29943721 - 29943651
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    |||||||||| ||||||||||||||||| || ||||||||| |||||||||| |||| | |||||||||||    
T  29943721 ttgaattttgatttgccgacacttttgaaaaataaaatataattattataattgtaactaatagaaaatat 29943651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 336 - 402
Target Start/End: Complemental strand, 36023751 - 36023685
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaa 402  Q
    |||||||||||||||||||||||||||| || ||||||||  ||||||||||  |||||||||||||    
T  36023751 ttgaattttgctttgccgacacttttgaaaaataaaatatgattattataattataaatgatagaaa 36023685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 336 - 406
Target Start/End: Complemental strand, 36054108 - 36054038
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    |||||||||| |||||||||||||||||||| ||||||||| |||||||||| ||||   |||||||||||    
T  36054108 ttgaattttgatttgccgacacttttgagaaataaaatataattattataattgtaaccaatagaaaatat 36054038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 2640284 - 2640208
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||| |||||||||||| ||| | ||||||||||||||||||| || ||||| || |||||||||||||    
T  2640284 gtacacctatttcataaatcaataagttatcgatcatttttatgtaataaataaatatttatcaacttttatatttt 2640208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 336 - 392
Target Start/End: Original strand, 6279779 - 6279835
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaa 392  Q
    |||||||||| |||||||||||||||||||| ||||||||| |||||||||| ||||    
T  6279779 ttgaattttgatttgccgacacttttgagaaataaaatataattattataattgtaa 6279835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 36054312 - 36054236
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||| |||||||||||| ||| | |||||||||||||||||||||  ||||| || |||||||||||||    
T  36054312 gtacacctatttcataaatcaataagttatcaatcatttttatgtaataaagagatatttatcaacttttatatttt 36054236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 41515872 - 41515948
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| |||||||||||||||| ||| | |||||||||| ||||||||||  ||||| || |||||||||||||    
T  41515872 gtacacctattttataaatcaataagttatcgatcatttttaagtaataaagagatatttatcaacttttatatttt 41515948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 336 - 408
Target Start/End: Original strand, 41516074 - 41516146
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||| |||||||||||||||||||| ||||||||| ||||||||||  |||   |||||||||||||    
T  41516074 ttgaattttgatttgccgacacttttgagaaataaaatataattattataattataaccaatagaaaatattt 41516146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 336 - 408
Target Start/End: Original strand, 13507496 - 13507566
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||| ||||||||||||||||| || ||||||||| |  ||||||| |||| |||||||||||||||    
T  13507496 ttgaattttgatttgccgacacttttgaaaaataaaatataat--ttataattgtaattgatagaaaatattt 13507566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 29943922 - 29943846
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||| |||| ||||||| ||||| |||||||||||||||||||||  | | | ||||||||||||||||    
T  29943922 gtacacctatttcataattcaataagttaacaatcatttttatgtaataaagagatgtctatcgacttttatatttt 29943846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 195 - 250
Target Start/End: Original strand, 6588296 - 6588351
Alignment:
Q  195 ataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||||| || ||||||||| ||||||||| |||||||||| |||||||||||    
T  6588296 ataaattaacaattatttttatgaaataaagaattatttgtcgagttttatatttt 6588351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 470 - 525
Target Start/End: Complemental strand, 15507144 - 15507089
Alignment:
Q  470 gcaatgattaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaact 525  Q
    ||||||||||| |||||||||||| |||| ||||||| ||||||||||||| ||||    
T  15507144 gcaatgattaaagaagcaaatataataattttgcattagaacttgtgcatttaact 15507089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 665
Target Start/End: Original strand, 13507600 - 13507641
Alignment:
Q  624 atttaaatataggtataccggtgcactcgaattttttgagtg 665  Q
    |||||||||||||||||||||| ||||| |||||||||||||    
T  13507600 atttaaatataggtataccggtacactcaaattttttgagtg 13507641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 250
Target Start/End: Original strand, 19268628 - 19268681
Alignment:
Q  197 aaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| |||||||||||| |||||||| |||||||||||  ||||||||||    
T  19268628 aaattaacgatcatttttatgaaataaagagctatttgtcgatatttatatttt 19268681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 40051261 - 40051330
Alignment:
Q  181 tgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||| ||||| ||||||||||| || ||||||||| |||||||| | ||||||  |||||||||||||    
T  40051261 tgttttttaaattaataaattaacgattatttttatggaataaagagcgatttgtgaacttttatatttt 40051330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 3911593 - 3911517
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||| ||||||| |||| ||||| || ||||||| || |||||||  ||||| ||||||||||||||||    
T  3911593 gtacacctatttcataaatctataagttaacgataatttttacgtgataaagagatatttatcgacttttatatttt 3911517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 187 - 285
Target Start/End: Original strand, 5155746 - 5155843
Alignment:
Q  187 ataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattttnnnnnnntattatttcctaagaacaaacatcattt 285  Q
    |||||||||||  ||||  || ||||||||||||||||||  ||||||| ||||||||||||||       ||||||||| |||||| |||||||||||    
T  5155746 ataaatcaatacgttaatgattatttttatgtaataaagagatatttgttgacttttatatttt-agaaaatattatttcataagaaaaaacatcattt 5155843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 249
Target Start/End: Original strand, 6279574 - 6279649
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattt 249  Q
    ||||| || ||| |||||||||||| |||   |||||||||||||||||||||  ||||| || ||||||||||||    
T  6279574 gtacatctatttcataaatcaataagttattgatcatttttatgtaataaagagatatttatcaacttttatattt 6279649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 577 - 628
Target Start/End: Original strand, 34353364 - 34353415
Alignment:
Q  577 ggtttccttaaccattaccctaagggcatcggttaacataacccttaattta 628  Q
    |||||||||||||||| |||||| |||| |||||| ||||||||| ||||||    
T  34353364 ggtttccttaaccattgccctaaaggcaccggttagcataaccctaaattta 34353415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 6513323 - 6513377
Alignment:
Q  196 taaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||||||| ||||||||| |||||||| |||||||| ||  ||||||||||    
T  6513323 taaattaactattatttttatggaataaagagctatttgttgatatttatatttt 6513377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 188 - 242
Target Start/End: Complemental strand, 13450677 - 13450623
Alignment:
Q  188 taaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttt 242  Q
    ||||||||||||||||  || ||||||||  |||||||| |||||||||||||||    
T  13450677 taaatcaataaattaatgataatttttattaaataaagagctatttgtcgacttt 13450623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 20212214 - 20212268
Alignment:
Q  196 taaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||||||| ||||||||| |||||||| |||||||| ||  ||||||||||    
T  20212214 taaattaactattatttttatggaataaagagctatttgttgatatttatatttt 20212268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 196 - 250
Target Start/End: Complemental strand, 33413051 - 33412997
Alignment:
Q  196 taaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||||||| | ||||||| ||||||||||||||||| ||  ||||||||||    
T  33413051 taaattaactattagttttatggaataaagaactatttgttgatatttatatttt 33412997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 34438248 - 34438302
Alignment:
Q  196 taaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||||||| ||||||||| |||||||| |||||||| ||  ||||||||||    
T  34438248 taaattaactattatttttatggaataaagagctatttgttgatatttatatttt 34438302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 196 - 250
Target Start/End: Complemental strand, 37909703 - 37909649
Alignment:
Q  196 taaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||||||| ||||||||| |||||||| |||||||| ||  ||||||||||    
T  37909703 taaattaactattatttttatggaataaagagctatttgttgatatttatatttt 37909649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 19203929 - 19203860
Alignment:
Q  181 tgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||| ||| ||||||||||||  || ||||||||| |||||| |  |||||||||| |||||||||||    
T  19203929 tgttttgtaattcaataaattaatgataatttttatgaaataaatagttatttgtcgatttttatatttt 19203860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 44544413 - 44544344
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgactttt 243  Q
    |||||||| ||||||||||| |||| ||||| || ||||| |||| |||||||  ||||| |||||||||    
T  44544413 gtacacctattttataaatctataagttaacgataattttaatgtgataaagagatatttatcgactttt 44544344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 2e-36; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 175 - 294
Target Start/End: Complemental strand, 39226985 - 39226867
Alignment:
Q  175 tacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattttnnnnnnntattatttcctaagaac 274  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||       ||||||||| |||||||    
T  39226985 tacacctgttttataaatcaataaattaactatcatttttacgtaataaagaattatttgtcgacttttata-tttaaaaaaatattatttcataagaac 39226887  T
Q  275 aaacatcatttaattgttta 294  Q
    ||||||||||||||||||||    
T  39226886 aaacatcatttaattgttta 39226867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 470 - 623
Target Start/End: Original strand, 46777273 - 46777424
Alignment:
Q  470 gcaatgattaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagtatnnnnnnnctgagattttcaacctaaaacttta 569  Q
    |||||| ||||| || |||||| |||||||||||||||||||||||||||||||||||||||||| ||        ||| ||||||||| |||||||||     
T  46777273 gcaatggttaagaaaacaaatacagtaatcttgcattggaacttgtgcattcaacttctcaaaagcataaaaag--tgatattttcaacataaaactttc 46777370  T
Q  570 nnnnnnnggtttccttaaccattaccctaagggcatcggttaacataaccctta 623  Q
           |||||||||||||||| ||||||||||| ||||||||||||||||||    
T  46777371 tctttttggtttccttaaccattgccctaagggcaccggttaacataaccctta 46777424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 336 - 408
Target Start/End: Original strand, 428080 - 428152
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  428080 ttgaattttgcttcgccgacacttttgagaaataaaatatagttattataattgtaaatgatagaaaatattt 428152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 175 - 294
Target Start/End: Original strand, 37118374 - 37118492
Alignment:
Q  175 tacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattttnnnnnnntattatttcctaagaac 274  Q
    ||||||| ||| |||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||       ||||||||| ||||||     
T  37118374 tacacctatttcataaatcaataaattaacgatcatttttatgtaataaagaaatatttatcgacttttatatttt-agaaaatattatttcataagaaa 37118472  T
Q  275 aaacatcatttaattgttta 294  Q
    ||||||||||| ||| ||||    
T  37118473 aaacatcatttcattcttta 37118492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 471 - 537
Target Start/End: Original strand, 36016439 - 36016505
Alignment:
Q  471 caatgattaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagtat 537  Q
    ||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  36016439 caatggttaaggaagcaaatatagtaatattgcatcggaacttgtgcattcaacttctcaaaagtat 36016505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 336 - 408
Target Start/End: Original strand, 968741 - 968813
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  968741 ttgaattttgctttgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 968813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 19503159 - 19503235
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||||||| ||||||||| || ||||| |||||||||| |||| |||||||||||||||||||||||||||||    
T  19503159 gtacacctgtttcataaatcaaaaagttaacgatcatttttacgtaaaaaagaactatttgtcgacttttatatttt 19503235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 336 - 408
Target Start/End: Original strand, 38034965 - 38035037
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  38034965 ttgaattttgctttgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 38035037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 335 - 408
Target Start/End: Complemental strand, 15877238 - 15877165
Alignment:
Q  335 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||||||| ||| ||| ||||||||| |||||||| ||||||||||| ||||||||||||||||||||    
T  15877238 gttgaattttgcttcgccaacatttttgagaaataaaatattgttattataattgtaaatgatagaaaatattt 15877165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 335 - 408
Target Start/End: Original strand, 19503360 - 19503433
Alignment:
Q  335 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||||||| ||| ||| ||||||||| |||||||| ||||||||||| ||||||||||||||||||||    
T  19503360 gttgaattttgcttcgccaacatttttgagaaataaaatattgttattataattgtaaatgatagaaaatattt 19503433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 161 - 250
Target Start/End: Complemental strand, 35567087 - 35566998
Alignment:
Q  161 gggagtttctaccgtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||||||| ||||| |||||| |||||| ||||| | ||| |||||||||||||||||||||  |||||| |||||||||||||||    
T  35567087 gggagtttctacggtacatctgtttcataaatgaataagtaaacgatcatttttatgtaataaagagttatttgccgacttttatatttt 35566998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 15877441 - 15877365
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||||||| |||||| ||||| ||||| ||||||||||||||| ||||| |||||||| ||||||||||||||    
T  15877441 gtacacctgtttcataaattaataagttaacgatcatttttatgtaaaaaagagctatttgttgacttttatatttt 15877365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 336 - 408
Target Start/End: Complemental strand, 20883789 - 20883717
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    ||||||||||||||||||| |||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  20883789 ttgaattttgctttgccgatacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 20883717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 335 - 406
Target Start/End: Original strand, 46880108 - 46880179
Alignment:
Q  335 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    ||||||||||| |||||||||||||||||||| ||||||||| ||||||||||  ||| |||||||||||||    
T  46880108 gttgaattttgatttgccgacacttttgagaaataaaatataattattataattataactgatagaaaatat 46880179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 339 - 408
Target Start/End: Original strand, 24189295 - 24189364
Alignment:
Q  339 aattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    ||||||| ||||||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  24189295 aattttgttttgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 24189364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 174 - 285
Target Start/End: Complemental strand, 24203234 - 24203124
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattttnnnnnnntattatttcctaagaa 273  Q
    |||||||| ||| |||||||||||||||||  || ||||||||||||||||||  ||||||| ||||||||||||||       ||||||||| ||||||    
T  24203234 gtacacctatttcataaatcaataaattaatgattatttttatgtaataaagagatatttgttgacttttatatttt-agaaaatattatttcataagaa 24203136  T
Q  274 caaacatcattt 285  Q
     |||||||||||    
T  24203135 aaaacatcattt 24203124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 336 - 408
Target Start/End: Complemental strand, 24009159 - 24009087
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||||||| ||||||||||||| || ||||||||| ||||||| ||  |||||||||||||||||||    
T  24009159 ttgaattttgcttttccgacacttttgaaaaataaaatataattattattattataaatgatagaaaatattt 24009087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 29273349 - 29273273
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    ||||||||||||  | ||| ||||| ||||| ||||||||||||||| ||||| |||||||||||||||||||||||    
T  29273349 gtacacctgtttcgtgaattaataatttaacgatcatttttatgtaacaaagagctatttgtcgacttttatatttt 29273273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 336 - 408
Target Start/End: Original strand, 29982298 - 29982370
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    ||||||||||||| | ||||| |||||| || |||||||||||||||||||| |||||| |||||||||||||    
T  29982298 ttgaattttgcttcgacgacatttttgataaataaaatatagttattataattgtaaataatagaaaatattt 29982370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 336 - 408
Target Start/End: Original strand, 45430254 - 45430326
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    ||||||||||||| ||| ||| |||| |||| |||||||| ||||||||||| ||||||||||||||||||||    
T  45430254 ttgaattttgcttcgccaacatttttaagaaataaaatattgttattataattgtaaatgatagaaaatattt 45430326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 336 - 406
Target Start/End: Complemental strand, 27275941 - 27275871
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    |||||||||| |||||||||||||||||||| ||||||||| |||||||||| ||||   |||||||||||    
T  27275941 ttgaattttgatttgccgacacttttgagaaataaaatataattattataattgtaaccaatagaaaatat 27275871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 194 - 294
Target Start/End: Original strand, 29982116 - 29982215
Alignment:
Q  194 aataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattttnnnnnnntattatttcctaagaacaaacatcatttaattgttt 293  Q
    ||||| ||||| ||||||||||||||| ||||| |||||||||||||||||||||||       |||||||| | ||||| ||||||||||| |||||||    
T  29982116 aataatttaacaatcatttttatgtaacaaagagctatttgtcgacttttatatttt-agaaaatattattttcaaagaaaaaacatcatttcattgttt 29982214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 336 - 406
Target Start/End: Complemental strand, 30819614 - 30819544
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    |||||||||| ||||| |||||||||||||| ||||||||| ||||||||||  ||| |||||||||||||    
T  30819614 ttgaattttgatttgcggacacttttgagaaataaaatataattattataattataactgatagaaaatat 30819544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 336 - 406
Target Start/End: Original strand, 39926039 - 39926109
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    |||||||||| ||||||||||||||||| || ||||||||| |||||||||| |||| | |||||||||||    
T  39926039 ttgaattttgatttgccgacacttttgaaaaataaaatataattattataattgtaactaatagaaaatat 39926109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 335 - 408
Target Start/End: Original strand, 28501581 - 28501654
Alignment:
Q  335 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||||||| ||||||| ||||||||| ||||||||   ||||||||  ||||||||||||||||||||    
T  28501581 gttgaattttgcttcgccgacatttttgagaaataaaatattagtattataactgtaaatgatagaaaatattt 28501654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 472 - 533
Target Start/End: Complemental strand, 41742478 - 41742417
Alignment:
Q  472 aatgattaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaa 533  Q
    |||| ||||| ||| ||||||||||| |||||| ||||||||||||||||||||||||||||    
T  41742478 aatggttaagaaagtaaatatagtaagcttgcagtggaacttgtgcattcaacttctcaaaa 41742417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 336 - 408
Target Start/End: Complemental strand, 29273154 - 29273082
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    ||||||||||||| | | | |||||||| || |||||||||||||||||||| |||||| |||||||||||||    
T  29273154 ttgaattttgcttcgacaatacttttgataaataaaatatagttattataattgtaaataatagaaaatattt 29273082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 174 - 249
Target Start/End: Original strand, 427877 - 427952
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattt 249  Q
    ||||| |||||| |||||||||||| ||||  ||| ||||||||||| |||||  |||||||||||||||||||||    
T  427877 gtacatctgtttcataaatcaataagttaaagatcctttttatgtaacaaagagttatttgtcgacttttatattt 427952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 355 - 406
Target Start/End: Original strand, 37118601 - 37118652
Alignment:
Q  355 cacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    |||||||||||| ||||||||| |||||||||| ||||||||||||||||||    
T  37118601 cacttttgagaaataaaatataattattataattgtaaatgatagaaaatat 37118652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 336 - 406
Target Start/End: Complemental strand, 24203029 - 24202959
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    |||||||||| ||||| |||||||||||||| |||||||||  |||||||||  ||| |||||||||||||    
T  24203029 ttgaattttgatttgcggacacttttgagaaataaaatataactattataattataactgatagaaaatat 24202959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 466 - 535
Target Start/End: Complemental strand, 41467637 - 41467568
Alignment:
Q  466 cagagcaatgattaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagt 535  Q
    |||||||||| ||||| || ||||||||||||||  | |||  |||||||||||||||||||||||||||    
T  41467637 cagagcaatggttaagaaaacaaatatagtaatcccgtattaaaacttgtgcattcaacttctcaaaagt 41467568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 46879909 - 46879986
Alignment:
Q  174 gtacacctgttttataaatcaataaa-ttaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||| | ||| ||||||||||||  ||||| || ||||||||||||||||||  ||||||||||||||||||||||    
T  46879909 gtacacttatttcataaatcaataaggttaacgattatttttatgtaataaagatatatttgtcgacttttatatttt 46879986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 20883991 - 20883915
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||||||||||| |||| ||||| || | |||||||| |||||||  ||||| ||||||||||||||||    
T  20883991 gtacacctattttataaatctataagttaacgataacttttatgtgataaagagatatttatcgacttttatatttt 20883915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 24189090 - 24189166
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||| ||||||| |||| ||||| || |||||||||| |||||||  ||||| ||||||||||||||||    
T  24189090 gtacacctatttcataaatctataagttaacgataatttttatgtgataaagagatatttatcgacttttatatttt 24189166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 27276144 - 27276068
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||| |||||||||||| ||| | ||||||||| |||||||||||  ||||| || |||||||||||||    
T  27276144 gtacacctatttcataaatcaataagttatcgatcatttttctgtaataaagagatatttatcaacttttatatttt 27276068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 30819816 - 30819740
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    ||||| || ||| |||||||||||| ||||  || ||||||||||||||||||  ||||||| ||||||||||||||    
T  30819816 gtacatctatttcataaatcaataagttaatgattatttttatgtaataaagagatatttgttgacttttatatttt 30819740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 336 - 388
Target Start/End: Complemental strand, 31603434 - 31603382
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataata 388  Q
    |||||||||||||||||||||||||||| || || |||||| |||||||||||    
T  31603434 ttgaattttgctttgccgacacttttgaaaaatataatataattattataata 31603382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 335 - 403
Target Start/End: Complemental strand, 35566874 - 35566806
Alignment:
Q  335 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaa 403  Q
    |||||||||||||||  | |  |||||||||| |||||| ||||||||||||| |||||||||||||||    
T  35566874 gttgaattttgctttaacaatgcttttgagaaataaaatttagttattataattgtaaatgatagaaaa 35566806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 37001038 - 37001090
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaaga 226  Q
    |||||||| ||| |||| ||||||||||||| |||||||||||||||||||||    
T  37001038 gtacacctatttcataattcaataaattaacaatcatttttatgtaataaaga 37001090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 336 - 408
Target Start/End: Original strand, 37002363 - 37002435
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||| ||||||||||||||||| || |||| |||| |||||||||| |||| | |||||| ||||||    
T  37002363 ttgaattttgatttgccgacacttttgaaaaataaagtataattattataattgtaagtaatagaatatattt 37002435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 39925834 - 39925910
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||| |||| ||||||| ||||| |||||||||||||||||||||  | | | ||||||||||||||||    
T  39925834 gtacacctatttcataattcaataagttaacaatcatttttatgtaataaagagatgtctatcgacttttatatttt 39925910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 45704540 - 45704616
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||| |||| ||||||| ||||| |||||||||||||||||||||  | | | ||||||||||||||||    
T  45704540 gtacacctatttcataattcaataagttaacaatcatttttatgtaataaagagatgtctatcgacttttatatttt 45704616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 45430073 - 45430148
Alignment:
Q  175 tacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    ||||||||||| |||||| ||||| ||| |  |||||||||||||| |||||  ||||||| ||||||||||||||    
T  45430073 tacacctgtttcataaattaataagttagcggtcatttttatgtaaaaaagagttatttgttgacttttatatttt 45430148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 48900552 - 48900627
Alignment:
Q  175 tacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    ||||||| ||| |||||||||||| | ||  || ||||||||||||||||||  ||||||| ||||||||||||||    
T  48900552 tacacctatttcataaatcaataagtaaatgattatttttatgtaataaagagatatttgttgacttttatatttt 48900627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 335 - 377
Target Start/End: Complemental strand, 39226783 - 39226741
Alignment:
Q  335 gttgaattttgctttgccgacacttttgagaagtaaaatatag 377  Q
    |||||||||||||| ||||||||||||||||| ||||||||||    
T  39226783 gttgaattttgcttcgccgacacttttgagaaataaaatatag 39226741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 46919875 - 46919814
Alignment:
Q  188 taaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    ||||||||||||||||| || ||||||||| ||||||||| ||||||| ||||||||| ||||    
T  46919875 taaatcaataaattaacgattatttttatgaaataaagaattatttgt-gacttttatgtttt 46919814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 335 - 404
Target Start/End: Complemental strand, 8294414 - 8294345
Alignment:
Q  335 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaat 404  Q
    ||||||||||| ||||||||||||||||| || ||||||||| |||| ||||  ||||  ||||||||||    
T  8294414 gttgaattttgatttgccgacacttttgaaaaataaaatataattatcataaatgtaacagatagaaaat 8294345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 250
Target Start/End: Complemental strand, 41809551 - 41809490
Alignment:
Q  189 aaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    ||||| ||||||||||||||| ||||||| ||||||||| ||||||| ||  ||||||||||    
T  41809551 aaatctataaattaactatcaattttatgaaataaagaattatttgttgatatttatatttt 41809490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 38034762 - 38034838
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||| | ||| ||||||| |||| ||||| || |||||||||| ||||| || ||||| ||||||||||||||||    
T  38034762 gtacacatatttcataaatctataagttaacaataatttttatgtgataaacaaatatttatcgacttttatatttt 38034838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 354 - 398
Target Start/End: Complemental strand, 40602555 - 40602511
Alignment:
Q  354 acacttttgagaagtaaaatatagttattataatagtaaatgata 398  Q
    ||||||| ||||| |||||||||||||||||||| ||||||||||    
T  40602555 acactttcgagaaataaaatatagttattataattgtaaatgata 40602511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 250
Target Start/End: Complemental strand, 42975241 - 42975186
Alignment:
Q  195 ataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    ||||||||||||| ||||||||| |||||| |||||||||| ||  ||||||||||    
T  42975241 ataaattaactattatttttatgaaataaaaaactatttgttgatatttatatttt 42975186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 347 - 406
Target Start/End: Original strand, 45704757 - 45704816
Alignment:
Q  347 tttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    ||||||||||||||| | || ||||||||| |||||||||| |||| | |||||||||||    
T  45704757 tttgccgacacttttaaaaaataaaatataattattataattgtaactaatagaaaatat 45704816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 20438877 - 20438931
Alignment:
Q  196 taaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||||||| ||||||||| |||||||| |||||||| ||  ||||||||||    
T  20438877 taaattaactattatttttatggaataaagagctatttgttgatatttatatttt 20438931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 31482730 - 31482680
Alignment:
Q  183 ttttataaatcaataaattaactatcatttttatgtaataaagaactattt 233  Q
    ||||| ||||| ||||||||||||| ||||||||| |||||||| ||||||    
T  31482730 ttttaaaaatctataaattaactattatttttatgaaataaagagctattt 31482680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 8770424 - 8770461
Alignment:
Q  189 aaatcaataaattaactatcatttttatgtaataaaga 226  Q
    ||||| ||||||||||||||||||||||| ||||||||    
T  8770424 aaatctataaattaactatcatttttatgaaataaaga 8770461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 3e-25; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 471 - 620
Target Start/End: Original strand, 32286031 - 32286178
Alignment:
Q  471 caatgattaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagtatnnnnnnnctgagattttcaacctaaaactttan 570  Q
    ||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||        ||| |||||||||||||||||||      
T  32286031 caatgattaaggaagcaaatataatatttttgcattggaacttgtgcattcaacttctcaaaagtataaaaag--tgatattttcaacctaaaactttct 32286128  T
Q  571 nnnnnnggtttccttaaccattaccctaagggcatcggttaacataaccc 620  Q
          |||||| ||||||||| ||||||||||| | |||| ||||||||    
T  32286129 ttttttggtttctttaaccattgccctaagggcaccagttagcataaccc 32286178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 174 - 294
Target Start/End: Complemental strand, 43460717 - 43460598
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattttnnnnnnntattatttcctaagaa 273  Q
    |||||||||||| ||||||||||||  |||| ||||||||||||||| ||||| |||||||||||||||||||||||       ||||||||| ||||||    
T  43460717 gtacacctgtttcataaatcaataagctaacgatcatttttatgtaaaaaagagctatttgtcgacttttatatttt-agaaaatattatttcataagaa 43460619  T
Q  274 caaacatcatttaattgttta 294  Q
     ||| ||||||| ||||||||    
T  43460618 aaaatatcatttcattgttta 43460598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 336 - 408
Target Start/End: Original strand, 9179031 - 9179103
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  9179031 ttgaattttgctttgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 9179103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 336 - 408
Target Start/End: Complemental strand, 2164916 - 2164844
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||||||||||||||||||| | || ||||||||| ||||||||||  |||||||||||||||||||    
T  2164916 ttgaattttgctttgccgacacttttaaaaaataaaatataattattataattataaatgatagaaaatattt 2164844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 336 - 408
Target Start/End: Original strand, 4471685 - 4471757
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    ||||||||||||| | |||||||||||| || |||||||||||||||||||| |||||| |||||||||||||    
T  4471685 ttgaattttgcttcgacgacacttttgataaataaaatatagttattataattgtaaataatagaaaatattt 4471757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 32718994 - 32719070
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||| ||| ||| |||||| ||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  32718994 gtactcctatttcataaattaataagttaacgatcatttttatgtaaaaaagaactatttgtcgacttttatatttt 32719070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 336 - 408
Target Start/End: Complemental strand, 36035682 - 36035610
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    ||||||||||||||| | |||||||||| || |||||||||||||||||||| |||||| |||||||||||||    
T  36035682 ttgaattttgctttgacaacacttttgataaataaaatatagttattataattgtaaataatagaaaatattt 36035610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 335 - 406
Target Start/End: Complemental strand, 13197665 - 13197594
Alignment:
Q  335 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    ||||||||||| |||||||||||||||||||| ||||||||| |||||||||| |||| | |||||||||||    
T  13197665 gttgaattttgatttgccgacacttttgagaaataaaatataattattataattgtaatttatagaaaatat 13197594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 174 - 294
Target Start/End: Original strand, 4471483 - 4471602
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattttnnnnnnntattatttcctaagaa 273  Q
    ||||||||||||  | ||| ||||| ||||| ||||||||||||||| ||||| |||||||||||||||||||||||       |||||||| | |||||    
T  4471483 gtacacctgtttcgtgaattaataatttaacgatcatttttatgtaacaaagagctatttgtcgacttttatatttt-agaaaatattattttcaaagaa 4471581  T
Q  274 caaacatcatttaattgttta 294  Q
     ||||||||||| ||||||||    
T  4471582 aaaacatcatttcattgttta 4471602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 336 - 406
Target Start/End: Complemental strand, 7087792 - 7087722
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    |||||||||| |||||||||||||||||||| ||||||||| |||||||||| |||| | |||||||||||    
T  7087792 ttgaattttgatttgccgacacttttgagaaataaaatataattattataattgtaactaatagaaaatat 7087722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 160 - 250
Target Start/End: Complemental strand, 31940795 - 31940705
Alignment:
Q  160 tgggagtttctaccgtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    ||||||||||||| |||||||| ||| |||| ||||||| ||||| |||||||||||||||||||||  | | | ||||||||||||||||    
T  31940795 tgggagtttctacggtacacctatttcataattcaataagttaacaatcatttttatgtaataaagagatgtctatcgacttttatatttt 31940705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 338 - 403
Target Start/End: Complemental strand, 12980179 - 12980114
Alignment:
Q  338 gaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaa 403  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||  ||||| ||||||||    
T  12980179 gaattttgctttgccgacacttttaagaaataaaatatagttattataattataaataatagaaaa 12980114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 335 - 408
Target Start/End: Complemental strand, 43460515 - 43460442
Alignment:
Q  335 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||||||| ||| ||| ||||||||| |||||||| ||||||||||  ||||||||||||||||||||    
T  43460515 gttgaattttgcttcgccaacatttttgagaaataaaatattgttattataactgtaaatgatagaaaatattt 43460442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 176 - 250
Target Start/End: Complemental strand, 12980378 - 12980304
Alignment:
Q  176 acacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||| ||| |||||||| ||| ||||| |||||||||||||||||||||  ||||||||| ||||||||||||    
T  12980378 acacctatttcataaatcattaagttaacgatcatttttatgtaataaagagatatttgtcggcttttatatttt 12980304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 336 - 406
Target Start/End: Complemental strand, 24247599 - 24247529
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    |||||||||| |||||||||||||||||||| ||||||||| |||||||||| ||||   |||||||||||    
T  24247599 ttgaattttgatttgccgacacttttgagaaataaaatataattattataattgtaaccaatagaaaatat 24247529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 336 - 406
Target Start/End: Complemental strand, 31940578 - 31940508
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    |||||||||| ||||||||||||||||| || ||||||||| |||||||||| |||| | |||||||||||    
T  31940578 ttgaattttgatttgccgacacttttgaaaaataaaatataattattataattgtaactaatagaaaatat 31940508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 336 - 406
Target Start/End: Original strand, 36496387 - 36496457
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    |||||||||| ||||||||||||||||| || ||||||||| |||||||||| |||| | |||||||||||    
T  36496387 ttgaattttgatttgccgacacttttgaaaaataaaatataattattataattgtaactaatagaaaatat 36496457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 336 - 406
Target Start/End: Original strand, 43065166 - 43065236
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    |||||||||| |||||||||||||||||||| ||||||||| |||||||||| ||||   |||||||||||    
T  43065166 ttgaattttgatttgccgacacttttgagaaataaaatataattattataattgtaaccaatagaaaatat 43065236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 189 - 250
Target Start/End: Original strand, 40681165 - 40681226
Alignment:
Q  189 aaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    ||||||||||| |||| ||| |||||||| ||||||||||||||| ||||||||||||||||    
T  40681165 aaatcaataaactaacaatcgtttttatgaaataaagaactatttatcgacttttatatttt 40681226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 33628729 - 33628653
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||| |||||||||||| ||| | |||||||||||||||||||||  ||||| || |||||||||||||    
T  33628729 gtacacctatttcataaatcaataagttatcgatcatttttatgtaataaagagatatttatcaacttttatatttt 33628653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 336 - 387
Target Start/End: Original strand, 16871807 - 16871858
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataat 387  Q
    |||||||||| |||||||||||||||||||| ||||||||| ||||||||||    
T  16871807 ttgaattttgatttgccgacacttttgagaaataaaatataattattataat 16871858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 339 - 406
Target Start/End: Complemental strand, 33628524 - 33628457
Alignment:
Q  339 aattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    ||||||| |||||||||||||||||||| ||||||||| |||||||||| ||||   |||||||||||    
T  33628524 aattttgatttgccgacacttttgagaaataaaatataattattataattgtaaccaatagaaaatat 33628457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 336 - 406
Target Start/End: Complemental strand, 3642839 - 3642769
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    |||||||||| | ||| |||||||||||||| ||||||||| ||||||||||  ||| |||||||||||||    
T  3642839 ttgaattttgatctgcggacacttttgagaaataaaatataattattataattataactgatagaaaatat 3642769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 477 - 535
Target Start/End: Complemental strand, 45197238 - 45197180
Alignment:
Q  477 ttaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagt 535  Q
    ||||||||||| ||||| |||||| |||||| |||||||||||||||||| ||||||||    
T  45197238 ttaaggaagcagatataataatctcgcattgaaacttgtgcattcaacttttcaaaagt 45197180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 470 - 535
Target Start/End: Complemental strand, 7643810 - 7643745
Alignment:
Q  470 gcaatgattaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagt 535  Q
    |||||| ||||| ||| |||||||||||| ||| |||| ||||||||||||||||| |||||||||    
T  7643810 gcaatggttaagaaagaaaatatagtaattttgtattgaaacttgtgcattcaactcctcaaaagt 7643745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 174 - 285
Target Start/End: Complemental strand, 19725413 - 19725303
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattttnnnnnnntattatttcctaagaa 273  Q
    ||||| || ||| |||||||||||| ||||  || ||||||||||||||||||  ||||||| ||||||||||||||       ||||||||| ||||||    
T  19725413 gtacatctatttcataaatcaataagttaatgataatttttatgtaataaagagatatttgttgacttttatatttt-agaaaatattatttcataagaa 19725315  T
Q  274 caaacatcattt 285  Q
     |||||||||||    
T  19725314 aaaacatcattt 19725303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 335 - 408
Target Start/End: Original strand, 32719194 - 32719267
Alignment:
Q  335 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||| ||||| ||| ||| |||||| || ||||||||  |||||||||| ||||||||||||||||||||    
T  32719194 gttgaattctgcttcgccaacatttttgaaaaataaaatattattattataattgtaaatgatagaaaatattt 32719267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 9178759 - 9178835
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||| ||||||| |||| ||||| || |||||||||| |||||||  ||||| ||||||||||||||||    
T  9178759 gtacacctatttcataaatctataagttaacgataatttttatgtgataaagagatatttatcgacttttatatttt 9178835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 13197862 - 13197786
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    ||||| || ||| |||||||||||| ||||| |||||| ||||||||||||||  || |||||||||||||| ||||    
T  13197862 gtacatctatttcataaatcaataagttaacgatcattattatgtaataaagagataattgtcgacttttatgtttt 13197786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 16871604 - 16871680
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||| |||||||||||| ||| | |||||||||||||||||||||  | ||| || |||||||||||||    
T  16871604 gtacacctatttcataaatcaataacttatcgatcatttttatgtaataaagagatctttatcaacttttatatttt 16871680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 336 - 392
Target Start/End: Original strand, 45145028 - 45145084
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaa 392  Q
    |||||||||  |||||||||||||||||||| ||||||||| |||||||||| ||||    
T  45145028 ttgaattttaatttgccgacacttttgagaaataaaatataattattataattgtaa 45145084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 176 - 285
Target Start/End: Complemental strand, 3643039 - 3642931
Alignment:
Q  176 acacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattttnnnnnnntattatttcctaagaaca 275  Q
    |||||| ||| |||||||||||  ||||  || ||||||||||||||||||  ||||||| ||||||||||||||       ||||||||| |||||| |    
T  3643039 acacctatttcataaatcaatacgttaatgattatttttatgtaataaagagatatttgttgacttttatatttt-agaaaatattatttcataagaaaa 3642941  T
Q  276 aacatcattt 285  Q
    ||||||||||    
T  3642940 aacatcattt 3642931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 486 - 525
Target Start/End: Complemental strand, 34935198 - 34935159
Alignment:
Q  486 caaatatagtaatcttgcattggaacttgtgcattcaact 525  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  34935198 caaatataataatcttgcattggaacttgtgcattcaact 34935159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 36035856 - 36035801
Alignment:
Q  194 aataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattt 249  Q
    ||||| ||||| ||||||||||||||| ||||| ||||||||||| ||||||||||    
T  36035856 aataatttaacgatcatttttatgtaacaaagagctatttgtcgatttttatattt 36035801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 250
Target Start/End: Original strand, 19718368 - 19718434
Alignment:
Q  184 tttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||| ||||| ||||||||||||| ||||||||| |||||||| |||||||| ||  ||||||||||    
T  19718368 tttaaaaatctataaattaactattatttttatgaaataaagagctatttgttgatatttatatttt 19718434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 294
Target Start/End: Original strand, 36886222 - 36886320
Alignment:
Q  195 ataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattttnnnnnnntattatttcctaagaacaaacatcatttaattgttta 294  Q
    |||||||||||||||||||| || |||||||| |||||||| ||  ||||||||||       ||||||||  |||||| ||||||||||| ||||||||    
T  36886222 ataaattaactatcatttttttgaaataaagagctatttgttgatatttatattttaaaaaaatattattttataagaa-aaacatcatttcattgttta 36886320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 577 - 623
Target Start/End: Complemental strand, 40737263 - 40737217
Alignment:
Q  577 ggtttccttaaccattaccctaagggcatcggttaacataaccctta 623  Q
    |||||||||||||||| ||||||||||| |||||| |||||||||||    
T  40737263 ggtttccttaaccattgccctaagggcaccggttagcataaccctta 40737217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 339 - 408
Target Start/End: Complemental strand, 25699013 - 25698944
Alignment:
Q  339 aattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||| | | |||||||||| || |||||||||||||||||||  |||||| ||| |||||||||    
T  25699013 aattttgcttcgacaacacttttgataaataaaatatagttattataagtgtaaataatacaaaatattt 25698944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 32238295 - 32238227
Alignment:
Q  181 tgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||| |||||  |||||||||| |||||||||||| |||||| |  ||||||||||||||||||||||    
T  32238295 tgttttctaaatttataaattaacgatcatttttatgaaataaa-agttatttgtcgacttttatatttt 32238227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 250
Target Start/End: Complemental strand, 43049887 - 43049826
Alignment:
Q  189 aaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    ||||| ||||||||||||| ||||||||| |||||||| |||||||| ||  ||||||||||    
T  43049887 aaatctataaattaactattatttttatgaaataaagagctatttgttgatatttatatttt 43049826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 2165120 - 2165044
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||| ||||||  |||| ||||| || |||||||||| |||||||  ||||| ||||||||||||||||    
T  2165120 gtacacctatttcataaatttataagttaacgataatttttatgtgataaagagatatttatcgacttttatatttt 2165044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 7087993 - 7087917
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||| |||||||||||| |||   |||||||||||||||||||||  ||||| || | |||||||||||    
T  7087993 gtacacctatttcataaatcaataagttattgatcatttttatgtaataaagagatatttatcaaattttatatttt 7087917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 36496184 - 36496236
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaaga 226  Q
    |||||||| ||| |||| ||||||| ||||| |||||||||||||||||||||    
T  36496184 gtacacctatttcataattcaataagttaacaatcatttttatgtaataaaga 36496236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 42444288 - 42444340
Alignment:
Q  183 ttttataaatcaataaattaactatcatttttatgtaataaagaactatttgt 235  Q
    ||||| ||||| ||| ||||||||||||||||||| |||||||| ||||||||    
T  42444288 ttttaaaaatctatatattaactatcatttttatgaaataaagagctatttgt 42444340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 250
Target Start/End: Complemental strand, 17642419 - 17642364
Alignment:
Q  195 ataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    ||||||||||||||||||||||| |||||| | |||||||| ||  ||||||||||    
T  17642419 ataaattaactatcatttttatgaaataaaaagctatttgttgatatttatatttt 17642364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 250
Target Start/End: Complemental strand, 24247788 - 24247725
Alignment:
Q  187 ataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||||||| ||| | ||||||||| |||||||||||  ||||| || |||||||||||||    
T  24247788 ataaatcaataagttatcgatcatttttctgtaataaagagatatttatcaacttttatatttt 24247725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 196 - 250
Target Start/End: Complemental strand, 16323903 - 16323849
Alignment:
Q  196 taaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||||||| ||||||||| |||||||| |||||||| ||  ||||||||||    
T  16323903 taaattaactattatttttatggaataaagagctatttgttgatatttatatttt 16323849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 26439584 - 26439638
Alignment:
Q  196 taaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||||||| ||||||||| |||||||| |||||||| ||  ||||||||||    
T  26439584 taaattaactattatttttatggaataaagagctatttgttgatatttatatttt 26439638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 378 - 408
Target Start/End: Original strand, 35595093 - 35595123
Alignment:
Q  378 ttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||||||||||||||||||||||||    
T  35595093 ttattataatagtaaatgatagaaaatattt 35595123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 39347193 - 39347247
Alignment:
Q  196 taaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||||||| ||||||||| |||||||| |||||||| ||  ||||||||||    
T  39347193 taaattaactattatttttatgaaataaagagctatttgttgatatttatatttt 39347247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 43921482 - 43921436
Alignment:
Q  189 aaatcaataaattaactatcatttttatgtaataaagaactatttgt 235  Q
    ||||| ||| ||||||||||||||||||| |||||||| ||||||||    
T  43921482 aaatctatacattaactatcatttttatgaaataaagagctatttgt 43921436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 1e-24; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 440 - 533
Target Start/End: Original strand, 55291236 - 55291330
Alignment:
Q  440 tttaagggaaatgttaaatagtgctc-cagagcaatgattaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaa 533  Q
    |||||||||||||||||  ||||| | ||| ||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||    
T  55291236 tttaagggaaatgttaaccagtgccctcagggcaatgattaaggaagcaaatatagtaattttgcattgaaacttgtgcattaaacttctcaaaa 55291330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 482 - 535
Target Start/End: Complemental strand, 27598317 - 27598264
Alignment:
Q  482 gaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagt 535  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27598317 gaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagt 27598264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 336 - 408
Target Start/End: Original strand, 17616649 - 17616721
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  17616649 ttgaattttgctttgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 17616721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 336 - 408
Target Start/End: Complemental strand, 45953816 - 45953744
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  45953816 ttgaattttgctttgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 45953744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 335 - 408
Target Start/End: Original strand, 34792122 - 34792195
Alignment:
Q  335 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||||||||||| ||||||||||||| | ||||||| ||||||||||  |||||||||||||||||||    
T  34792122 gttgaattttgctttgccaacacttttgagaaattaaatataattattataattataaatgatagaaaatattt 34792195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 336 - 408
Target Start/End: Complemental strand, 24347001 - 24346929
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    ||||||||||||||||| ||||||||||||| | ||||||| ||||||||||  |||||||||||||||||||    
T  24347001 ttgaattttgctttgccaacacttttgagaaattaaatataattattataattataaatgatagaaaatattt 24346929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 471 - 535
Target Start/End: Complemental strand, 24355882 - 24355818
Alignment:
Q  471 caatgattaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagt 535  Q
    ||||| |||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||    
T  24355882 caatggttaaggaagcaaatatagtaatatcgcattggaacttgtgcattcaactcctcaaaagt 24355818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 336 - 408
Target Start/End: Original strand, 27735160 - 27735232
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    ||||||||||||||| |||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  27735160 ttgaattttgctttgtcgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 27735232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 336 - 408
Target Start/End: Complemental strand, 36188057 - 36187985
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||||||||||||||||||||| || |||||| || ||||||||||  |||||||||||||||||||    
T  36188057 ttgaattttgctttgccgacacttttgaaaaataaaatgtaattattataattataaatgatagaaaatattt 36187985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 48058843 - 48058767
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||||||| ||||||||||||  |||| ||||||||||||||| ||| |||||||| ||||||||||||||||    
T  48058843 gtacacctgtttcataaatcaataagctaacgatcatttttatgtaaaaaaaaactatttatcgacttttatatttt 48058767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 178 - 250
Target Start/End: Original strand, 55060295 - 55060367
Alignment:
Q  178 acctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||| ||| |||||||||||||||||| ||||||||||||||||| ||| |||| ||||||||||||||||||    
T  55060295 acctatttcataaatcaataaattaacaatcatttttatgtaatatagagctatctgtcgacttttatatttt 55060367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 445 - 535
Target Start/End: Original strand, 34360841 - 34360932
Alignment:
Q  445 gggaaatgttaaatagtgctc-cagagcaatgattaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagt 535  Q
    ||||||||||||  ||||| | ||| |||||| |||||||||||||||||||||||| | |||| ||||||||||||||||| |||||||||    
T  34360841 gggaaatgttaatcagtgccctcagggcaatggttaaggaagcaaatatagtaatctcgtattgaaacttgtgcattcaactcctcaaaagt 34360932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 335 - 408
Target Start/End: Original strand, 34936791 - 34936864
Alignment:
Q  335 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||||||| | | |||||||||| || |||||||| ||||||||||| ||||||||||||||||||||    
T  34936791 gttgaattttgcttcgacaacacttttgaaaaataaaatattgttattataattgtaaatgatagaaaatattt 34936864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 335 - 408
Target Start/End: Complemental strand, 56272742 - 56272669
Alignment:
Q  335 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||||||| ||||||| ||||||||| ||||||||  |||||||||  ||||||||||||||||||||    
T  56272742 gttgaattttgcttcgccgacatttttgagaaataaaatattattattataactgtaaatgatagaaaatattt 56272669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 336 - 408
Target Start/End: Complemental strand, 1182754 - 1182682
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    ||||||||| |||| ||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  1182754 ttgaattttacttttccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 1182682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 336 - 408
Target Start/End: Complemental strand, 16917383 - 16917311
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    ||||||||| |||||||||||||||||| || ||||||||  ||||||||||  |||||||||||||||||||    
T  16917383 ttgaatttttctttgccgacacttttgaaaaataaaatatgattattataattataaatgatagaaaatattt 16917311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 30951163 - 30951239
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||| |||||||||||||||| | |||||||||||||||||||||  ||||| || |||||||||||||    
T  30951163 gtacacctatttcataaatcaataaattatcgatcatttttatgtaataaagagatatttatcaacttttatatttt 30951239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 471 - 535
Target Start/End: Complemental strand, 34650932 - 34650868
Alignment:
Q  471 caatgattaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagt 535  Q
    ||||| |||| ||||||||||||||||| ||||||||||| |||||||||||||| |||||||||    
T  34650932 caatggttaaagaagcaaatatagtaattttgcattggaatttgtgcattcaactcctcaaaagt 34650868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 34936594 - 34936670
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||| ||||||| |||||||||||| ||||| ||||||||||||||| ||| | ||||| |||||||||||||||||    
T  34936594 gtactcctgtttcataaatcaataagttaacgatcatttttatgtaaaaaatagctattcgtcgacttttatatttt 34936670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 336 - 408
Target Start/End: Complemental strand, 48058659 - 48058587
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    ||||||||||||| ||| ||| ||||||||| |||||||| ||||||||||  ||||||||||||||||||||    
T  48058659 ttgaattttgcttcgccaacatttttgagaaataaaatattgttattataactgtaaatgatagaaaatattt 48058587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 56272945 - 56272869
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||||||| ||||||||||||  |||| ||||||||||||||| |||||  ||||| ||||||||||||||||    
T  56272945 gtacacctgtttcataaatcaataagctaacgatcatttttatgtaaaaaagagttatttatcgacttttatatttt 56272869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 20927807 - 20927732
Alignment:
Q  175 tacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    ||||||| |||||||||||||||| ||| | |||||||||||||||||||||  ||||| || |||||||||||||    
T  20927807 tacacctattttataaatcaataagttatcgatcatttttatgtaataaagagatatttatcaacttttatatttt 20927732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 336 - 406
Target Start/End: Complemental strand, 22413724 - 22413654
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    |||||||||| ||||| |||||||||||||| ||||||||| ||||||||||  ||| |||||||||||||    
T  22413724 ttgaattttgatttgcggacacttttgagaaataaaatataattattataattataattgatagaaaatat 22413654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 336 - 406
Target Start/End: Original strand, 28013247 - 28013317
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    |||||||||| |||||||||||||||||||| ||||||||| |||||||||| ||||   |||||||||||    
T  28013247 ttgaattttgatttgccgacacttttgagaaataaaatataattattataattgtaaccaatagaaaatat 28013317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 336 - 406
Target Start/End: Original strand, 30839486 - 30839556
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    |||||||||| |||||||||||||||||||| ||||||||| |||||||||| ||||   |||||||||||    
T  30839486 ttgaattttgatttgccgacacttttgagaaataaaatataattattataattgtaaccaatagaaaatat 30839556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 336 - 406
Target Start/End: Original strand, 52104650 - 52104720
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    |||||||||| |||||||||||||||||||| ||||||||| |||||||||| ||||   |||||||||||    
T  52104650 ttgaattttgatttgccgacacttttgagaaataaaatataattattataattgtaaccaatagaaaatat 52104720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 336 - 406
Target Start/End: Original strand, 52760030 - 52760100
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    |||||||||| |||||||||||||||||||| ||||||||| ||||||||||  ||| | |||||||||||    
T  52760030 ttgaattttgatttgccgacacttttgagaaataaaatataattattataattataactaatagaaaatat 52760100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 336 - 406
Target Start/End: Complemental strand, 54851205 - 54851135
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    |||||||||| ||||||||||||||||| || ||||||||| |||||||||| |||| | |||||||||||    
T  54851205 ttgaattttgatttgccgacacttttgaaaaataaaatataattattataattgtaactaatagaaaatat 54851135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 174 - 285
Target Start/End: Complemental strand, 22413927 - 22413817
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattttnnnnnnntattatttcctaagaa 273  Q
    |||||||| ||| |||||||||||| ||||  || ||||||||||||||||||  ||||||| ||||||||||||||       ||||||||| ||||||    
T  22413927 gtacacctatttcataaatcaataagttaatgattatttttatgtaataaagagatatttgttgacttttatatttt-aaaaaatattatttcataagaa 22413829  T
Q  274 caaacatcattt 285  Q
     |||||||||||    
T  22413828 aaaacatcattt 22413817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 17616446 - 17616522
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||||||||||  |||||||||| || |||||||||| |||||||  ||||| ||||||||||||||||    
T  17616446 gtacacctattttataaatttataaattaacgataatttttatgtgataaagagatatttatcgacttttatatttt 17616522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 48253980 - 48254056
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||| |||||||||||| ||| | |||||||||||||||||||||  ||||| || |||||||||||||    
T  48253980 gtacacctatttcataaatcaataagttatcaatcatttttatgtaataaagagatatttatcaacttttatatttt 48254056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 336 - 408
Target Start/End: Original strand, 48254185 - 48254257
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||| |||||||| ||||||||||| ||||||||| |||||||||| ||||   |||||||||||||    
T  48254185 ttgaattttgatttgccgatacttttgagaaataaaatataattattataattgtaaccaatagaaaatattt 48254257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 336 - 403
Target Start/End: Original strand, 4540801 - 4540868
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaa 403  Q
    |||||||||| ||||||||||||||||| || ||||||||| |||||||||| |||| | ||||||||    
T  4540801 ttgaattttgatttgccgacacttttgaaaaataaaatataattattataattgtaactaatagaaaa 4540868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 336 - 387
Target Start/End: Complemental strand, 20927606 - 20927555
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataat 387  Q
    |||||||||| |||||||||||||||||||| ||||||||| ||||||||||    
T  20927606 ttgaattttgatttgccgacacttttgagaaataaaatataattattataat 20927555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 178 - 233
Target Start/End: Original strand, 25420820 - 25420875
Alignment:
Q  178 acctgttttataaatcaataaattaactatcatttttatgtaataaagaactattt 233  Q
    |||||||| |||||||||||||||||| ||||||||||  ||||||||||||||||    
T  25420820 acctgtttcataaatcaataaattaacaatcatttttagataataaagaactattt 25420875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 337 - 408
Target Start/End: Original strand, 49144188 - 49144259
Alignment:
Q  337 tgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    ||||||||| ||| | |||||||||||||| ||||||||| ||||||||||  ||| |||||||||||||||    
T  49144188 tgaattttgatttacggacacttttgagaaataaaatataattattataattataactgatagaaaatattt 49144259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 336 - 406
Target Start/End: Complemental strand, 10332799 - 10332729
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    |||||||||| |||||| |||||||| |||| ||||||||| ||||||||||  ||| |||||||||||||    
T  10332799 ttgaattttgatttgccaacacttttaagaaataaaatataattattataatcataattgatagaaaatat 10332729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 336 - 406
Target Start/End: Complemental strand, 23390663 - 23390593
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    |||||||||| |||||||||||||||||||| ||||||||| ||||| |||| ||||   |||||||||||    
T  23390663 ttgaattttgatttgccgacacttttgagaaataaaatataattattctaattgtaaccaatagaaaatat 23390593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 336 - 406
Target Start/End: Original strand, 30951364 - 30951434
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    |||||||||| ||| |||||||||||||||| ||||||||| |||||||||| ||||   |||||||||||    
T  30951364 ttgaattttgatttaccgacacttttgagaaataaaatataattattataattgtaacaaatagaaaatat 30951434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 339 - 405
Target Start/End: Complemental strand, 39512818 - 39512752
Alignment:
Q  339 aattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaata 405  Q
    ||||||| ||||||||||||||||| || ||||||||| |||||||||| |||| | ||||||||||    
T  39512818 aattttgatttgccgacacttttgaaaaataaaatataattattataattgtaactaatagaaaata 39512752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 336 - 406
Target Start/End: Complemental strand, 46548526 - 46548456
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    |||||||||| ||||||||||||||| | || ||||||||| |||||||||| |||| | |||||||||||    
T  46548526 ttgaattttgatttgccgacacttttaaaaaataaaatataattattataattgtaactaatagaaaatat 46548456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 16917591 - 16917515
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||| ||||||| |||| ||||| || |||||||||| |||||||  ||||| ||||||||||||||||    
T  16917591 gtacacctatttcataaatctataagttaacgataatttttatgtgataaagagatatttatcgacttttatatttt 16917515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 25814420 - 25814496
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||| |||||| ||||| ||| | |||||||||||||||||||||  ||||| || |||||||||||||    
T  25814420 gtacacctatttcataaattaataagttatcgatcatttttatgtaataaagagatatttatcaacttttatatttt 25814496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 336 - 392
Target Start/End: Original strand, 25814622 - 25814678
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaa 392  Q
    |||||||||| ||||| |||||||||||||| ||||||||| |||||||||| ||||    
T  25814622 ttgaattttgatttgctgacacttttgagaaataaaatataattattataattgtaa 25814678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 27734949 - 27735025
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||||||| ||||||| |||| ||||| || |||||||| | |||||||  ||||| ||||||||||||||||    
T  27734949 gtacacctgtttcataaatctataagttaacgataatttttatatgataaagagatatttatcgacttttatatttt 27735025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 30839282 - 30839358
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    ||||| || ||| |||||||||||| ||| | |||||||||||||||||||||  ||||| || |||||||||||||    
T  30839282 gtacatctatttcataaatcaataagttatcaatcatttttatgtaataaagagatatttatcaacttttatatttt 30839358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 40319367 - 40319291
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||| |||||||||||| ||| | ||||||||| |||||||||||  ||||| || |||||||||||||    
T  40319367 gtacacctatttcataaatcaataagttatcgatcatttttctgtaataaagagatatttatcaacttttatatttt 40319291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 46564752 - 46564828
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||| |||||||||||  ||||  || ||||||||||||||||||  ||||||| ||||||||||||||    
T  46564752 gtacacctatttcataaatcaatacgttaatgattatttttatgtaataaagagatatttgttgacttttatatttt 46564828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 50716580 - 50716504
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||| |||| ||||||| ||||| |||||||||||||||||||||  | | | ||||||||||||||||    
T  50716580 gtacacctatttcataattcaataagttaacaatcatttttatgtaataaagagatgtctatcgacttttatatttt 50716504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 52104447 - 52104523
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    ||||| || ||| |||||||||||| ||| | |||||||||||||||||||||  ||||| || |||||||||||||    
T  52104447 gtacatctatttcataaatcaataagttatcgatcatttttatgtaataaagagatatttatcaacttttatatttt 52104523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 54851388 - 54851312
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||| |||| ||||||| ||||| |||||||||||||||||||||  | | | ||||||||||||||||    
T  54851388 gtacacctatttcataattcaataagttaacaatcatttttatgtaataaagagatgtctatcgacttttatatttt 54851312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 339 - 405
Target Start/End: Original strand, 55060487 - 55060553
Alignment:
Q  339 aattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaata 405  Q
    |||||| ||| | ||||||||||||  |||||||| | ||||||||||| |||||||||||||||||    
T  55060487 aatttttcttcgacgacacttttgatgagtaaaattttgttattataattgtaaatgatagaaaata 55060553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 43518422 - 43518491
Alignment:
Q  181 tgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||| |||||||||||||||||||| || ||||   ||||||||||| ||||| || |||||||||||    
T  43518422 tgttttctaaatcaataaattaactataatatttacaaaataaagaactttttgttgatttttatatttt 43518491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 442 - 537
Target Start/End: Complemental strand, 46405624 - 46405525
Alignment:
Q  442 taagggaaatgttaaatagtgctc-cagagcaatgattaaggaagcaaatatag---taatcttgcattggaacttgtgcattcaacttctcaaaagtat 537  Q
    ||||||||||| |||  ||||| | ||| |||||| ||||||||||||||||||   |||||||||||   |||||||||||||| ||| ||||||||||    
T  46405624 taagggaaatgctaaccagtgccctcagggcaatggttaaggaagcaaatatagcagtaatcttgcatcaaaacttgtgcattcagcttttcaaaagtat 46405525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 336 - 376
Target Start/End: Original strand, 4150369 - 4150409
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatata 376  Q
    |||||||||| |||||||||||||||||||| |||||||||    
T  4150369 ttgaattttgatttgccgacacttttgagaaataaaatata 4150409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 23390867 - 23390791
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    ||||| || ||| |||||||||||| ||| | ||||||||| |||||||||||  ||||| || |||||||||||||    
T  23390867 gtacatctatttcataaatcaataagttatcgatcatttttctgtaataaagagatatttatcaacttttatatttt 23390791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 178 - 250
Target Start/End: Complemental strand, 24347198 - 24347126
Alignment:
Q  178 acctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||||||| | |||||||| || ||||||||||||| ||||  ||||| |||||||| |||||||    
T  24347198 acctgtttcataaatctacaaattaacgataatttttatgtaatgaagagatatttatcgactttcatatttt 24347126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 34791919 - 34791995
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||||||| ||||||  | || ||||| || ||||||||||||||||||  ||||| |||||||| |||||||    
T  34791919 gtacacctgtttcataaatttacaagttaacgataatttttatgtaataaagagatatttatcgactttcatatttt 34791995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 36188261 - 36188185
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||| ||||||  |||| ||||| || |||||||||| |||||||  ||||| ||||||||||||||||    
T  36188261 gtacacctatttcataaatttataagttaacgataatttttatgtgataaagagatatttatcgacttttatatttt 36188185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 39513023 - 39512947
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||| |||| ||||||| ||||  ||| |||||||||||||||||  | ||| ||||||||||||||||    
T  39513023 gtacacctatttcataattcaataagttaataatcttttttatgtaataaagagatgtttatcgacttttatatttt 39512947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 336 - 392
Target Start/End: Complemental strand, 40319161 - 40319105
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaa 392  Q
    |||||||||| |||| ||||||||||||||| ||||||||| ||||| |||| ||||    
T  40319161 ttgaattttgatttgtcgacacttttgagaaataaaatataattattctaattgtaa 40319105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 45954019 - 45953943
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||| | ||| ||||||| |||| ||||| || |||||||||| ||||| || ||||| ||||||||||||||||    
T  45954019 gtacacatatttcataaatctataagttaacgataatttttatgtgataaacaaatatttatcgacttttatatttt 45953943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 52759826 - 52759902
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||| |||||||||||| ||| | || |||||||| |||||||||  ||||| || |||||||||||||    
T  52759826 gtacacctatttcataaatcaataagttatcaattatttttatataataaagagatatttatcaacttttatatttt 52759902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 226
Target Start/End: Original strand, 4540597 - 4540648
Alignment:
Q  175 tacacctgttttataaatcaataaattaactatcatttttatgtaataaaga 226  Q
    ||||||| ||| |||| ||||||| ||||| |||||||||||||||||||||    
T  4540597 tacacctatttcataattcaataagttaacaatcatttttatgtaataaaga 4540648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 30891206 - 30891257
Alignment:
Q  184 tttataaatcaataaattaactatcatttttatgtaataaagaactatttgt 235  Q
    |||| ||||| ||| ||||||||||||||||||| |||||||| ||||||||    
T  30891206 tttaaaaatctatatattaactatcatttttatgaaataaagagctatttgt 30891257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 250
Target Start/End: Original strand, 49143999 - 49144062
Alignment:
Q  187 ataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||| ||||| ||||  || ||||||||||||||||||  ||||||| ||||||||||||||    
T  49143999 ataaattaataagttaatgattatttttatgtaataaagagatatttgttgacttttatatttt 49144062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 23556136 - 23556198
Alignment:
Q  188 taaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| |||||||| ||||||| |||| |||||| |  ||| ||||||||||||||||||    
T  23556136 taaatcaaaaaattaacgatcatttatatgaaataaatatttatctgtcgacttttatatttt 23556198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 174 - 244
Target Start/End: Original strand, 28013070 - 28013140
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgactttta 244  Q
    |||||||| ||| |||||||||||| ||| | ||||||||| |||||||||||  ||||| || |||||||    
T  28013070 gtacacctatttcataaatcaataagttatcgatcatttttctgtaataaagagatatttatcaactttta 28013140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 472 - 525
Target Start/End: Original strand, 19655218 - 19655271
Alignment:
Q  472 aatgattaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaact 525  Q
    ||||| ||||||| |||||||| |||| ||| ||||||| ||||||||||||||    
T  19655218 aatgaataaggaaacaaatataataattttgtattggaatttgtgcattcaact 19655271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 250
Target Start/End: Original strand, 53451772 - 53451813
Alignment:
Q  209 atttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||||||| ||||| |||||| ||||||||||||||||    
T  53451772 atttttatgtaacaaagagctatttttcgacttttatatttt 53451813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 2e-23; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 336 - 408
Target Start/End: Complemental strand, 32621504 - 32621432
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||    
T  32621504 ttgaattttgcttcgccgacacttttgagaaataaaatatagttattataattataaatgatagaaaatattt 32621432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 19608657 - 19608582
Alignment:
Q  175 tacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    ||||||||||| |||||||||||| ||||| ||||||||||||||| ||||| |||||||||||||||||||||||    
T  19608657 tacacctgtttcataaatcaataagttaacgatcatttttatgtaaaaaagagctatttgtcgacttttatatttt 19608582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 470 - 533
Target Start/End: Complemental strand, 26141799 - 26141736
Alignment:
Q  470 gcaatgattaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaa 533  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  26141799 gcaatggttaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaactcctcaaaa 26141736  T

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Target: chr3; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 335 - 408
Target Start/End: Original strand, 43388384 - 43388457
Alignment:
Q  335 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||||||| ||| | ||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  43388384 gttgaattttgcttcgccaaaacttttgagaaataaaatatagttattataattgtaaatgatagaaaatattt 43388457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 336 - 408
Target Start/End: Complemental strand, 8324551 - 8324479
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  8324551 ttgaattttgctttgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 8324479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 336 - 408
Target Start/End: Complemental strand, 54910911 - 54910839
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  54910911 ttgaattttgctttgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 54910839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 335 - 408
Target Start/End: Original strand, 52179195 - 52179268
Alignment:
Q  335 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||||||| ||| ||| ||||||||| |||||||| ||||||||||| ||||||||||||||||||||    
T  52179195 gttgaattttgcttcgccaacatttttgagaaataaaatattgttattataattgtaaatgatagaaaatattt 52179268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 41902316 - 41902240
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||||||| |||||| |||||  |||| ||||||||||||||| ||||| |||||||||||||||||||||||    
T  41902316 gtacacctgtttcataaattaataagctaacgatcatttttatgtaaaaaagagctatttgtcgacttttatatttt 41902240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 335 - 408
Target Start/End: Complemental strand, 19608458 - 19608385
Alignment:
Q  335 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||||||| ||| ||| |||||| || |||||||| ||||||||||| ||||||||||||||||||||    
T  19608458 gttgaattttgcttcgccaacatttttgaaaaataaaatattgttattataattgtaaatgatagaaaatattt 19608385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 335 - 408
Target Start/End: Complemental strand, 41902113 - 41902040
Alignment:
Q  335 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||||||| ||| ||| ||||||||| |||||||| ||||||||||  ||||||||||||||||||||    
T  41902113 gttgaattttgcttcgccaacatttttgagaaataaaatattgttattataactgtaaatgatagaaaatattt 41902040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 52178999 - 52179068
Alignment:
Q  181 tgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    ||||| |||||||||||| ||||| ||||||||||||||| ||||| |||||| ||||||||||||||||    
T  52178999 tgtttcataaatcaataagttaacgatcatttttatgtaaaaaagagctatttatcgacttttatatttt 52179068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 43744264 - 43744340
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| |||||||||||||||| ||| | |||||||||||||||||||||  ||||| || |||||||||||||    
T  43744264 gtacacctattttataaatcaataagttatcgatcatttttatgtaataaagagatatttatcaacttttatatttt 43744340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 53444909 - 53444833
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    ||||||||||||| | ||| ||||| ||||| ||||||| ||||||| ||||| |||||||||||||||||||||||    
T  53444909 gtacacctgttttgtgaattaataatttaacgatcatttatatgtaacaaagagctatttgtcgacttttatatttt 53444833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 335 - 406
Target Start/End: Complemental strand, 40284080 - 40284009
Alignment:
Q  335 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    ||||||||||| |||||||||||||||||||| ||||||||| ||||||||||  |||  ||||||||||||    
T  40284080 gttgaattttgatttgccgacacttttgagaaataaaatataattattataattataatcgatagaaaatat 40284009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 250
Target Start/End: Complemental strand, 40284265 - 40284202
Alignment:
Q  187 ataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||| ||||| ||||| || ||||||||||||||||||| ||||||||||||||||||||||    
T  40284265 ataaataaataagttaacgattatttttatgtaataaagaaatatttgtcgacttttatatttt 40284202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 174 - 294
Target Start/End: Complemental strand, 32621706 - 32621587
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattttnnnnnnntattatttcctaagaa 273  Q
    |||||||| ||| ||||||||||||  |||  |||||||||||| || ||||| |||||||||||||||||||||||       ||||||||| ||||||    
T  32621706 gtacacctatttcataaatcaataagataaagatcatttttatgaaacaaagagctatttgtcgacttttatatttt-aaaaaatattatttcataagaa 32621608  T
Q  274 caaacatcatttaattgttta 294  Q
     |||||| |||| ||||||||    
T  32621607 aaaacataatttcattgttta 32621587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 336 - 406
Target Start/End: Original strand, 47600190 - 47600260
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    |||||||||| |||||||||||||||||||| ||||||||| |||||||||| ||||   |||||||||||    
T  47600190 ttgaattttgatttgccgacacttttgagaaataaaatataattattataattgtaaccaatagaaaatat 47600260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 46948660 - 46948736
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||| |||||||||||| ||||  || ||||||||||||||||||  ||||||| ||||||||||||||    
T  46948660 gtacacctatttcataaatcaataagttaatgattatttttatgtaataaagagatatttgttgacttttatatttt 46948736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 52457987 - 52458063
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||| |||| ||||||| ||||| |||||||||||||||||||||  | ||| ||||||||||||||||    
T  52457987 gtacacctatttcataattcaataagttaacaatcatttttatgtaataaagagatgtttatcgacttttatatttt 52458063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 54911115 - 54911039
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||||||||||  |||||||||| || |||||||||| |||||||  ||||| ||||||||||||||||    
T  54911115 gtacacctattttataaatttataaattaacgataatttttatgtgataaagagatatttatcgacttttatatttt 54911039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 339 - 406
Target Start/End: Original strand, 46948870 - 46948937
Alignment:
Q  339 aattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    ||||||| ||||| |||||||||||||| ||||||||| ||||||||||  ||| |||||||||||||    
T  46948870 aattttgatttgcagacacttttgagaaataaaatataattattataattataactgatagaaaatat 46948937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 336 - 406
Target Start/End: Complemental strand, 542529 - 542459
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    |||||||||| |||||||||| ||||||||| ||||||||| |||||||||| ||||   |||||||||||    
T  542529 ttgaattttgatttgccgacatttttgagaaataaaatataattattataattgtaaccaatagaaaatat 542459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 477 - 535
Target Start/End: Complemental strand, 22938590 - 22938532
Alignment:
Q  477 ttaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagt 535  Q
    ||||| || ||||||||||||||| |||| ||||||||| |||||||||||||||||||    
T  22938590 ttaagaaaacaaatatagtaatctcgcatgggaacttgtacattcaacttctcaaaagt 22938532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 336 - 406
Target Start/End: Original strand, 41574978 - 41575048
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    |||||||||| ||||| | |||||||||||| ||||||||| ||||||||||  ||| |||||||||||||    
T  41574978 ttgaattttgatttgcagccacttttgagaaataaaatataattattataattataactgatagaaaatat 41575048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 336 - 406
Target Start/End: Original strand, 43744466 - 43744536
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    |||||||||  |||||||||||||||||||| ||||||||| |||||||||| ||||   |||||||||||    
T  43744466 ttgaattttaatttgccgacacttttgagaaataaaatataattattataattgtaaccaatagaaaatat 43744536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 187 - 249
Target Start/End: Complemental strand, 45727143 - 45727081
Alignment:
Q  187 ataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattt 249  Q
    |||| ||||||| ||||| |||||||||||||||||||||| ||| | |||||||||||||||    
T  45727143 ataattcaataagttaacaatcatttttatgtaataaagaaatatctatcgacttttatattt 45727081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 336 - 406
Target Start/End: Complemental strand, 54830985 - 54830915
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    |||||||||| |||||||||||||||||||| ||||||||| ||||| |||| ||||   |||||||||||    
T  54830985 ttgaattttgatttgccgacacttttgagaaataaaatataattattctaattgtaaccaatagaaaatat 54830915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 460 - 525
Target Start/End: Original strand, 49366246 - 49366311
Alignment:
Q  460 gtgctccagagcaatgattaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaact 525  Q
    |||| |||| ||||||||||||| ||||||||||||||||  |||||| || ||||||||||||||    
T  49366246 gtgccccagggcaatgattaaggtagcaaatatagtaatcccgcattgaaatttgtgcattcaact 49366311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 335 - 387
Target Start/End: Complemental strand, 45726951 - 45726899
Alignment:
Q  335 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataat 387  Q
    ||||||||||| ||| |||||||||||||||| ||||||||| ||||||||||    
T  45726951 gttgaattttgatttaccgacacttttgagaaataaaatataattattataat 45726899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 54831190 - 54831114
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||| |||||||||||| ||| | ||||||||| |||||||||||  ||||| || |||||||||||||    
T  54831190 gtacacctatttcataaatcaataagttatcgatcatttttctgtaataaagagatatttatcaacttttatatttt 54831114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 187 - 250
Target Start/End: Complemental strand, 542718 - 542655
Alignment:
Q  187 ataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||||||| ||| | |||||||||||||||||||||  ||||| || |||||||||||||    
T  542718 ataaatcaataagttatcgatcatttttatgtaataaagagatatttatcaacttttatatttt 542655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 339 - 406
Target Start/End: Complemental strand, 25558512 - 25558445
Alignment:
Q  339 aattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    ||||||| ||||| |||||||||||||| ||||||||| |||||||||| ||||   |||||||||||    
T  25558512 aattttgatttgctgacacttttgagaaataaaatataattattataattgtaaccaatagaaaatat 25558445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 347 - 406
Target Start/End: Complemental strand, 47243837 - 47243778
Alignment:
Q  347 tttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    |||||||||||||||||||| ||||||||| |||||||||| |||| | |||| ||||||    
T  47243837 tttgccgacacttttgagaaataaaatatatttattataattgtaactaataggaaatat 47243778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 477 - 535
Target Start/End: Original strand, 3383564 - 3383622
Alignment:
Q  477 ttaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagt 535  Q
    ||||| || |||||||| |||||| | |||||||||||||||||||||| |||||||||    
T  3383564 ttaagaaaacaaatataataatctcgtattggaacttgtgcattcaactcctcaaaagt 3383622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 294
Target Start/End: Original strand, 25592077 - 25592172
Alignment:
Q  198 aattaactatcatttttatgtaataaagaactatttgtcgacttttatattttnnnnnnntattatttcctaagaacaaacatcatttaattgttta 294  Q
    |||||||||| ||||||||| ||||||||||||||||| ||  ||||||||||       | ||||||| |||||| ||||||||||| ||||||||    
T  25592077 aattaactattatttttatggaataaagaactatttgttgatatttatatttt-agaaaatgttatttcataagaaaaaacatcatttcattgttta 25592172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 196 - 294
Target Start/End: Original strand, 788534 - 788631
Alignment:
Q  196 taaattaactatcatttttatgtaataaagaactatttgtcgacttttatattttnnnnnnntattatttcctaagaacaaacatcatttaattgttta 294  Q
    |||||||||||| ||||||||| |||||||| |||||||| ||  ||||||||||       | ||||||| |||||| ||||||||||| ||||||||    
T  788534 taaattaactattatttttatggaataaagagctatttgttgatatttatatttt-atgaaatgttatttcataagaaaaaacatcatttcattgttta 788631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 8324755 - 8324679
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||| ||||||| |||| ||||| || |||||||||| |||||||  ||||| |||| |||||||||||    
T  8324755 gtacacctatttcataaatctataagttaacgataatttttatgtgataaagagatatttatcgaattttatatttt 8324679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 25558717 - 25558641
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||| |||||| ||||| ||| | |||||||||||||||||||||  ||||| || |||||| ||||||    
T  25558717 gtacacctatttcataaattaataagttatcgatcatttttatgtaataaagagatatttatcaacttttttatttt 25558641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 41574775 - 41574851
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    ||||||||  || |||||||||||| ||||  || ||||||||||||||||||  ||||| | ||||||||||||||    
T  41574775 gtacacctaattcataaatcaataagttaatgattatttttatgtaataaagagatatttattgacttttatatttt 41574851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 188 - 248
Target Start/End: Original strand, 46868540 - 46868600
Alignment:
Q  188 taaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatt 248  Q
    ||||||||||||||||  || ||||||||| |||||||| ||||||||||| |||| ||||    
T  46868540 taaatcaataaattaatgattatttttatgaaataaagagctatttgtcgaattttgtatt 46868600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 345 - 405
Target Start/End: Complemental strand, 27715959 - 27715897
Alignment:
Q  345 gctttgccgacacttttgagaagtaaaatat--agttattataatagtaaatgatagaaaata 405  Q
    |||||||||||| ||||||||| ||||||||  |||||||| ||| |||||| ||||||||||    
T  27715959 gctttgccgacatttttgagaaataaaatatagagttattacaattgtaaattatagaaaata 27715897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 249
Target Start/End: Original strand, 47599988 - 47600063
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattt 249  Q
    ||||| || ||| |||||||||||| ||| | ||||||||||| |||||||||  ||||| || ||||||||||||    
T  47599988 gtacatctatttcataaatcaataagttatcgatcatttttatataataaagagatatttatcaacttttatattt 47600063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 196 - 250
Target Start/End: Complemental strand, 3136607 - 3136553
Alignment:
Q  196 taaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||||||| ||||||||| |||||||| |||||||| ||  ||||||||||    
T  3136607 taaattaactattatttttatggaataaagagctatttgttgatatttatatttt 3136553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 47244052 - 47244002
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaa 224  Q
    |||||||| ||| |||||||||||| ||| | |||||||||||||||||||    
T  47244052 gtacacctatttcataaatcaataagttatcgatcatttttatgtaataaa 47244002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 53516643 - 53516697
Alignment:
Q  196 taaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||||||| ||||||||| |||||||| |||||||| ||  ||||||||||    
T  53516643 taaattaactattatttttatggaataaagagctatttgttgatatttatatttt 53516697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 353 - 406
Target Start/End: Original strand, 52458199 - 52458252
Alignment:
Q  353 gacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    ||||||||||| || ||||||||| |||||||||| |||| | |||||||||||    
T  52458199 gacacttttgaaaaataaaatataattattataattgtaactaatagaaaatat 52458252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 2e-23; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 336 - 408
Target Start/End: Complemental strand, 42647561 - 42647489
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||    
T  42647561 ttgaattttgcttcgccgacacttttgagaaataaaatatagttattataattttaaatgatagaaaatattt 42647489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 466 - 537
Target Start/End: Original strand, 3430557 - 3430627
Alignment:
Q  466 cagagcaatgattaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagtat 537  Q
    |||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3430557 cagagcaatggttaaggaag-aaatatagcaatcttgcattggaacttgtgcattcaacttctcaaaagtat 3430627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 174 - 294
Target Start/End: Complemental strand, 42647763 - 42647644
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattttnnnnnnntattatttcctaagaa 273  Q
    |||||||||||| |||||||||||| |||| |||||||||||||||| ||||| ||| |||||||||||||||||||       ||||||||| ||||||    
T  42647763 gtacacctgtttcataaatcaataagttaaatatcatttttatgtaacaaagagctacttgtcgacttttatatttt-agaaaatattatttcataagaa 42647665  T
Q  274 caaacatcatttaattgttta 294  Q
     |||||| |||| ||||||||    
T  42647664 aaaacataatttcattgttta 42647644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 336 - 408
Target Start/End: Complemental strand, 31210783 - 31210711
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  31210783 ttgaattttgctttgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 31210711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 336 - 408
Target Start/End: Complemental strand, 36672093 - 36672021
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  36672093 ttgaattttgctttgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 36672021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 336 - 408
Target Start/End: Complemental strand, 5800079 - 5800007
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||||  ||||||||| |||||||||    
T  5800079 ttgaattttgctttgccgacacttttgaaaaataaaatataattattataattataaatgataaaaaatattt 5800007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 339 - 407
Target Start/End: Original strand, 6079837 - 6079905
Alignment:
Q  339 aattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatatt 407  Q
    ||||||||||||||||||||||||| || ||||||||| ||||||||||  ||||||||||||||||||    
T  6079837 aattttgctttgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatatt 6079905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 336 - 403
Target Start/End: Original strand, 43025307 - 43025374
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaa 403  Q
    ||||||||||||| ||||||| ||||||||| |||||||||||||||||||| |||||||||| ||||    
T  43025307 ttgaattttgcttcgccgacaattttgagaaataaaatatagttattataattgtaaatgataaaaaa 43025374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 335 - 406
Target Start/End: Original strand, 48354954 - 48355025
Alignment:
Q  335 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    ||||||||||| |||||||| ||||||||||| ||||||||| |||||||||| |||| |||||||||||||    
T  48354954 gttgaattttgatttgccgatacttttgagaaataaaatataattattataatcgtaattgatagaaaatat 48355025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 29451055 - 29451130
Alignment:
Q  175 tacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    ||||| ||||| |||||||||||||||||| || ||||||||  |||||||||||||||||||| |||||| ||||    
T  29451055 tacacttgtttgataaatcaataaattaacaattatttttataaaataaagaactatttgtcgatttttatctttt 29451130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 248
Target Start/End: Original strand, 29852235 - 29852302
Alignment:
Q  181 tgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatt 248  Q
    |||||| ||||||||||||||||| |||||||||||| |||||| |  ||||||||||||||||||||    
T  29852235 tgttttctaaatcaataaattaacaatcatttttatgaaataaatagttatttgtcgacttttatatt 29852302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 336 - 406
Target Start/End: Complemental strand, 12979747 - 12979677
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    |||||||||| ||||| |||||||||||||| ||||||||| ||||||||||  ||| |||||||||||||    
T  12979747 ttgaattttgatttgcggacacttttgagaaataaaatataattattataattataactgatagaaaatat 12979677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 336 - 406
Target Start/End: Original strand, 26921917 - 26921987
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    |||||||||| ||||| |||||||||||||| ||||||||| ||||||||||  ||| |||||||||||||    
T  26921917 ttgaattttgatttgcggacacttttgagaaataaaatataattattataattataactgatagaaaatat 26921987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 336 - 405
Target Start/End: Original strand, 33196509 - 33196578
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaata 405  Q
    |||||||||| |||||||||||||||||||| ||||||||| |||||||||| ||||   ||||||||||    
T  33196509 ttgaattttgatttgccgacacttttgagaaataaaatataattattataattgtaaccaatagaaaata 33196578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 12979949 - 12979873
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||| |||||||||||| ||||  || ||||||||||||||||||  ||||||| ||||||||||||||    
T  12979949 gtacacctatttcataaatcaataagttaatgattatttttatgtaataaagagatatttgttgacttttatatttt 12979873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 22667304 - 22667380
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||| |||||||||||| ||| | |||||||||||||||||||||  ||||| || |||||||||||||    
T  22667304 gtacacctatttcataaatcaataagttatcgatcatttttatgtaataaagagatatttatcaacttttatatttt 22667380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 336 - 392
Target Start/End: Original strand, 28712139 - 28712195
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaa 392  Q
    |||||||||| |||||||||||||||||||| ||||||||| |||||||||| ||||    
T  28712139 ttgaattttgatttgccgacacttttgagaaataaaatataattattataattgtaa 28712195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 336 - 408
Target Start/End: Original strand, 39628070 - 39628142
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    ||||||||| |||||||||||||||||| || ||||||| | | ||||||||  |||||||||||||||||||    
T  39628070 ttgaattttactttgccgacacttttgaaaaataaaataaaataattataattataaatgatagaaaatattt 39628142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 336 - 387
Target Start/End: Original strand, 22667505 - 22667556
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataat 387  Q
    |||||||||| |||||||||||||||||||| ||||||||| ||||||||||    
T  22667505 ttgaattttgatttgccgacacttttgagaaataaaatataattattataat 22667556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 336 - 387
Target Start/End: Complemental strand, 41085667 - 41085616
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataat 387  Q
    |||||||||| |||||||||||||||||||| ||||||||| ||||||||||    
T  41085667 ttgaattttgatttgccgacacttttgagaaataaaatataattattataat 41085616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 336 - 387
Target Start/End: Complemental strand, 41090435 - 41090384
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataat 387  Q
    |||||||||| |||||||||||||||||||| ||||||||| ||||||||||    
T  41090435 ttgaattttgatttgccgacacttttgagaaataaaatataattattataat 41090384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 336 - 406
Target Start/End: Complemental strand, 41903260 - 41903190
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    |||||||||| ||||||||||||||| |||| ||||||||| |||||||||| ||||   |||||||||||    
T  41903260 ttgaattttgatttgccgacacttttaagaaataaaatataattattataattgtaaccaatagaaaatat 41903190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 336 - 406
Target Start/End: Original strand, 45427370 - 45427440
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    |||||||||| ||||| |||||||||||||| ||||||| | ||||||||||  ||| |||||||||||||    
T  45427370 ttgaattttgatttgcggacacttttgagaaataaaatagaattattataattataactgatagaaaatat 45427440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 11444310 - 11444386
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||| |||||||||||| ||||  || |||||||||||||||| |  ||||||| ||||||||||||||    
T  11444310 gtacacctatttcataaatcaataagttaatgattatttttatgtaataaatagatatttgttgacttttatatttt 11444386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 477 - 537
Target Start/End: Original strand, 42795382 - 42795442
Alignment:
Q  477 ttaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagtat 537  Q
    |||||||| |||||||||||||||| ||||| ||||||| |||||||||| | ||||||||    
T  42795382 ttaaggaaacaaatatagtaatcttacattgaaacttgtacattcaactttttaaaagtat 42795442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 33485968 - 33486043
Alignment:
Q  175 tacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    ||||||| ||| |||||||||||| ||| | || ||||||||||||||||||  ||||| || |||||||||||||    
T  33485968 tacacctatttcataaatcaataagttatcaattatttttatgtaataaagagatatttatcaacttttatatttt 33486043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 39627868 - 39627943
Alignment:
Q  175 tacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    ||||||| ||| ||||||| |||| ||||| || |||||||||| |||||||  ||||| ||||||||||||||||    
T  39627868 tacacctatttcataaatctataagttaacgataatttttatgtgataaagagatatttatcgacttttatatttt 39627943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 336 - 387
Target Start/End: Original strand, 46153473 - 46153524
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataat 387  Q
    |||||||||| ||||||||||||||||| || ||||||||| ||||||||||    
T  46153473 ttgaattttgttttgccgacacttttgaaaaataaaatataattattataat 46153524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 336 - 406
Target Start/End: Original strand, 11444512 - 11444582
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    |||||||||| ||||  ||||||||| |||| ||||||||| ||||||||||  ||| |||||||||||||    
T  11444512 ttgaattttgatttgtggacactttttagaaataaaatataattattataattataactgatagaaaatat 11444582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 33098766 - 33098820
Alignment:
Q  196 taaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||||||| ||||||||| ||||||||||||||||| ||  ||||||||||    
T  33098766 taaattaactattatttttatggaataaagaactatttgttgatatttatatttt 33098820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 285
Target Start/End: Original strand, 26921715 - 26921825
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattttnnnnnnntattatttcctaagaa 273  Q
    |||||||| ||| |||||||||||  ||||  || || |||||||||||||||  ||||||| ||||||||||||||       ||||||||| ||||||    
T  26921715 gtacacctatttcataaatcaatacgttaatgattatctttatgtaataaagagatatttgttgacttttatatttt-agaaaatattatttcataagaa 26921813  T
Q  274 caaacatcattt 285  Q
     |||||||||||    
T  26921814 aaaacatcattt 26921825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Original strand, 46152419 - 46152464
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttat 381  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||    
T  46152419 ttgaattttgctttgccgacacttttgaaaaataaaatataattat 46152464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 33196304 - 33196356
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaaga 226  Q
    |||||||| ||| |||||||||||| ||| | |||||||||||||||||||||    
T  33196304 gtacacctatttcataaatcaataagttatcgatcatttttatgtaataaaga 33196356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 36672296 - 36672220
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    ||||| || ||| ||||||| |||| ||||| || |||||||||| |||||||  ||||| ||||||||||||||||    
T  36672296 gtacatctatttcataaatctataagttaacgataatttttatgtgataaagagatatttatcgacttttatatttt 36672220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 2247402 - 2247351
Alignment:
Q  184 tttataaatcaataaattaactatcatttttatgtaataaagaactatttgt 235  Q
    |||| ||||| ||| ||||||||||||||||||| |||||||| ||||||||    
T  2247402 tttaaaaatctatatattaactatcatttttatgaaataaagagctatttgt 2247351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 28711938 - 28712013
Alignment:
Q  175 tacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    ||||||| ||||||||||||| || ||| | ||||||||| | |||||||||  ||||| || |||||||||||||    
T  28711938 tacacctattttataaatcaacaagttatcgatcatttttctataataaagatatatttatcaacttttatatttt 28712013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 250
Target Start/End: Complemental strand, 41903449 - 41903386
Alignment:
Q  187 ataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||| ||||| ||| | |||||||||||||||||||||  ||||| || |||||||||||||    
T  41903449 ataaattaataagttatcgatcatttttatgtaataaagagatatttatcaacttttatatttt 41903386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 47901049 - 47900979
Alignment:
Q  176 acacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatat 247  Q
    |||| ||||||| |||||||||||||||| |||| ||||||  |||||| || |||||||| ||||||||||    
T  47901049 acacttgttttaaaaatcaataaattaacgatcacttttataaaataaa-aattatttgtcaacttttatat 47900979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 196 - 250
Target Start/End: Complemental strand, 2621019 - 2620965
Alignment:
Q  196 taaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    ||||||||| || ||||||||| ||||||||||||||||| ||  ||||||||||    
T  2621019 taaattaacaattatttttatggaataaagaactatttgttgatatttatatttt 2620965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 26011003 - 26011057
Alignment:
Q  196 taaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||||||| ||||||||| |||||||| |||||||| ||  ||||||||||    
T  26011003 taaattaactattatttttatggaataaagagctatttgttgatatttatatttt 26011057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 5800282 - 5800209
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatat 247  Q
    |||||||| ||| ||||||| |||| ||||| || ||||| |||| |||||||  ||||| |||||||||||||    
T  5800282 gtacacctatttcataaatctataagttaacgataattttaatgtgataaagagatatttatcgacttttatat 5800209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 29953718 - 29953787
Alignment:
Q  181 tgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||| |||||  |||||||||| ||| |||||||  ||||||||||| ||| ||||| ||||||||||    
T  29953718 tgttttttaaatttataaattaacgatcgtttttataaaataaagaactctttatcgacatttatatttt 29953787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 474 - 535
Target Start/End: Original strand, 41143793 - 41143854
Alignment:
Q  474 tgattaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagt 535  Q
    |||||||||||||||||||| || | ||| ||||||||||||| | |||| | |||||||||    
T  41143793 tgattaaggaagcaaatataatagtattgtattggaacttgtgtaatcaattcctcaaaagt 41143854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 8e-23; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 33902124 - 33902199
Alignment:
Q  175 tacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||||||||||||| |||||||| || ||||||||||| |||||||||||||||| ||||||||||||||||    
T  33902124 tacacctgttttataaattaataaattgaccatcatttttatataataaagaactatttatcgacttttatatttt 33902199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 336 - 408
Target Start/End: Original strand, 14575715 - 14575787
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  14575715 ttgaattttgctttgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 14575787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 336 - 408
Target Start/End: Complemental strand, 14721217 - 14721145
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  14721217 ttgaattttgctttgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 14721145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 339 - 408
Target Start/End: Original strand, 35777627 - 35777696
Alignment:
Q  339 aattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    ||||||||||||||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  35777627 aattttgctttgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 35777696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 43167309 - 43167233
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||||||| |||||||||||| ||||  ||||| ||||||||| ||||| |||||||||||||||||||||||    
T  43167309 gtacacctgtttcataaatcaataagttaaagatcatctttatgtaacaaagagctatttgtcgacttttatatttt 43167233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 335 - 406
Target Start/End: Original strand, 7456588 - 7456659
Alignment:
Q  335 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    |||||| ||||||| ||||||||||||||||| ||||||| |||||||||||| |||||| |||||||||||    
T  7456588 gttgaaatttgcttcgccgacacttttgagaaataaaatacagttattataattgtaaataatagaaaatat 7456659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 482 - 535
Target Start/End: Complemental strand, 38353729 - 38353676
Alignment:
Q  482 gaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagt 535  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  38353729 gaagcaaatatagtaatctcgcattggaacttgtgcattcaactcctcaaaagt 38353676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 231865 - 231789
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| |||||||||||||||| ||| | |||||||||||||||||||||  ||||| || |||||||||||||    
T  231865 gtacacctattttataaatcaataagttatcgatcatttttatgtaataaagagatatttatcaacttttatatttt 231789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 336 - 408
Target Start/End: Complemental strand, 15264206 - 15264134
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||| ||||| |||||||||||||| ||||||||| |||||||||| ||||  ||||||||||||||    
T  15264206 ttgaattttgatttgcggacacttttgagaaataaaatataattattataattgtaaccgatagaaaatattt 15264134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 32092448 - 32092372
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| |||||||||||||||| ||| | |||||||||||||||||||||  ||||| || |||||||||||||    
T  32092448 gtacacctattttataaatcaataagttatcgatcatttttatgtaataaagagatatttatcaacttttatatttt 32092372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 336 - 408
Target Start/End: Complemental strand, 41609250 - 41609178
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    ||||||||||||||  |||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  41609250 ttgaattttgctttatcgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 41609178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 336 - 408
Target Start/End: Complemental strand, 43167108 - 43167036
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||||||  ||||||||||||| || |||||||||||||||| ||| |||||||||| |||||||||    
T  43167108 ttgaattttgcttccccgacacttttgaaaaataaaatatagttattaaaattgtaaatgataaaaaatattt 43167036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 189 - 250
Target Start/End: Original strand, 7456262 - 7456323
Alignment:
Q  189 aaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    ||||||| |||||||| |||||||||||||| |||||| |||||||| ||||||||||||||    
T  7456262 aaatcaacaaattaacgatcatttttatgtagtaaagagctatttgttgacttttatatttt 7456323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 337 - 406
Target Start/End: Complemental strand, 14054574 - 14054505
Alignment:
Q  337 tgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    ||||||||| |||||||||||||||||||| ||||||||| |||||||||| ||||   |||||||||||    
T  14054574 tgaattttgatttgccgacacttttgagaaataaaatataattattataattgtaaccaatagaaaatat 14054505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 36184102 - 36184028
Alignment:
Q  175 tacacctgttttataaatcaataaattaactatc-atttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    ||||||| |||||||||||||||||||||| ||| |||||||||||| |||||  ||| ||||||||||||||||||    
T  36184102 tacacctattttataaatcaataaattaacgatcaatttttatgtaacaaaga--tatctgtcgacttttatatttt 36184028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 336 - 408
Target Start/End: Complemental strand, 972313 - 972241
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    ||||||||| |||||||||||||||||| || ||||||| | |||| |||||  |||||||||||||||||||    
T  972313 ttgaattttactttgccgacacttttgaaaaataaaataaaattataataattataaatgatagaaaatattt 972241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 336 - 387
Target Start/End: Complemental strand, 231663 - 231612
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataat 387  Q
    |||||||||| |||||||||||||||||||| ||||||||| ||||||||||    
T  231663 ttgaattttgatttgccgacacttttgagaaataaaatataattattataat 231612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 469 - 526
Target Start/End: Complemental strand, 15311687 - 15311630
Alignment:
Q  469 agcaatgattaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaactt 526  Q
    ||||||| |||||||| ||| ||||||||||| |||| ||||||||||||||||||||    
T  15311687 agcaatggttaaggaatcaagtatagtaatctcgcataggaacttgtgcattcaactt 15311630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 14054780 - 14054704
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||| |||||||||||| ||| | ||||||||| |||||||||||  ||||| || |||||||||||||    
T  14054780 gtacacctatttcataaatcaataagttatcgatcatttttctgtaataaagagatatttatcaacttttatatttt 14054704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 21946040 - 21946088
Alignment:
Q  185 ttataaatcaataaattaactatcatttttatgtaataaagaactattt 233  Q
    |||||||||||||||||||| |||||||||||| |||||||| ||||||    
T  21946040 ttataaatcaataaattaacaatcatttttatgaaataaagagctattt 21946088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 33654868 - 33654944
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||| |||| ||||||| | ||||||||| || ||||||||| ||||||||  ||||||| ||||||||||||||    
T  33654868 gtacacttgttatataaattattaaattaacgattatttttatgaaataaagagttatttgttgacttttatatttt 33654944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 972515 - 972440
Alignment:
Q  175 tacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||  |||||||||| |||| ||||| || |||||||||| |||||||  ||||| ||||||||||||||||    
T  972515 tacacctaatttataaatctataagttaacgataatttttatgtgataaagagatatttatcgacttttatatttt 972440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 347 - 406
Target Start/End: Complemental strand, 32092234 - 32092175
Alignment:
Q  347 tttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    |||||||||||||||||||| ||||||||| |||||||||| ||||   |||||||||||    
T  32092234 tttgccgacacttttgagaaataaaatataattattataattgtaatcaatagaaaatat 32092175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 335 - 406
Target Start/End: Complemental strand, 36183894 - 36183823
Alignment:
Q  335 gttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    ||||||||||| ||| |||||||||||||||| ||||||| |  |||| |||| |||| |||||||||||||    
T  36183894 gttgaattttgatttaccgacacttttgagaaataaaataaatctattgtaattgtaactgatagaaaatat 36183823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 7456462 - 7456512
Alignment:
Q  342 tttgctttgccgacacttttgagaagtaaaatatagttattataatagtaa 392  Q
    ||||||| ||||||||||||||||| ||||||| |||||||||||| ||||    
T  7456462 tttgcttcgccgacacttttgagaaataaaatacagttattataattgtaa 7456512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 336 - 381
Target Start/End: Original strand, 664979 - 665024
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttat 381  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||    
T  664979 ttgaattttgctttgccgacacttttgaaaaataaaatataattat 665024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 250
Target Start/End: Complemental strand, 35682446 - 35682385
Alignment:
Q  189 aaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||||||||| |||||||||||||| |||||||| |||| ||| ||  ||||||||||    
T  35682446 aaatcaataaattacctatcatttttatgaaataaagagctatatgttgatatttatatttt 35682385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 14575512 - 14575588
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||| ||||||| |||| ||||| || |||||||||| ||||| |  ||||| ||||||||||||||||    
T  14575512 gtacacctatttcataaatctataagttaacgataatttttatgtgataaaaagatatttatcgacttttatatttt 14575588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 35777420 - 35777496
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||| ||||||| |||| ||||| || |||||||||| |||||||  | ||| ||||||||||||||||    
T  35777420 gtacacctatttcataaatctataagttaacgataatttttatgtgataaagagatctttatcgacttttatatttt 35777496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 41609452 - 41609376
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    ||||| || ||| ||||||| |||| ||||| || |||||||||| |||||||  ||||| ||||||||||||||||    
T  41609452 gtacatctatttcataaatctataagttaacgataatttttatgtgataaagagatatttatcgacttttatatttt 41609376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 41802453 - 41802413
Alignment:
Q  195 ataaattaactatcatttttatgtaataaagaactatttgt 235  Q
    ||||||||||||||||||||||| |||||||| ||||||||    
T  41802453 ataaattaactatcatttttatgaaataaagagctatttgt 41802413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 250
Target Start/End: Original strand, 9913249 - 9913304
Alignment:
Q  195 ataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||| |||||||||||||||||| |||| ||||||||||| |  ||||||||||    
T  9913249 ataaatgaactatcatttttatgtagtaaataactatttgtcaatatttatatttt 9913304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 250
Target Start/End: Complemental strand, 13091259 - 13091204
Alignment:
Q  195 ataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    ||||||||||||||||||||||| |||||| | |||||||| ||  ||||||||||    
T  13091259 ataaattaactatcatttttatgaaataaaaagctatttgttgatatttatatttt 13091204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 250
Target Start/End: Complemental strand, 29744248 - 29744193
Alignment:
Q  195 ataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    ||||||||||||||||||||||| |||||||| |||||| | ||  ||||||||||    
T  29744248 ataaattaactatcatttttatgaaataaagagctatttattgatatttatatttt 29744193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 13795333 - 13795387
Alignment:
Q  196 taaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||||||| ||||||||| |||||||| |||||||| ||  ||||||||||    
T  13795333 taaattaactattatttttatggaataaagagctatttgttgatatttatatttt 13795387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 37431411 - 37431465
Alignment:
Q  196 taaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||||||| ||||||||| |||||||| |||||||| ||  ||||||||||    
T  37431411 taaattaactattatttttatgaaataaagagctatttgttgatatttatatttt 37431465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 3e-22; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 466 - 622
Target Start/End: Complemental strand, 8484785 - 8484631
Alignment:
Q  466 cagagcaatgattaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagtatnnnnnnnctgagattttcaacctaaaac 565  Q
    |||| ||||| |||||||||||||||||||||| ||  ||||||| ||||||||||||||||||||||||||        ||| ||| ||||||||||||    
T  8484785 cagatcaatggttaaggaagcaaatatagtaatttttaattggaatttgtgcattcaacttctcaaaagtataaaaag--tgatattctcaacctaaaac 8484688  T
Q  566 tttannnnnnnggtttccttaaccattaccctaagggcatcggttaacataaccctt 622  Q
    |||        |||||||||||||||| ||||||| ||| |||||| ||||||||||    
T  8484687 tttctttttttggtttccttaaccattgccctaagagcaccggttagcataaccctt 8484631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 339 - 408
Target Start/End: Complemental strand, 2197944 - 2197875
Alignment:
Q  339 aattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    ||||||||||  |||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||    
T  2197944 aattttgcttcaccgacacttttgagaaataaaatatagttattatcattgtaaatgatagaaaatattt 2197875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 336 - 408
Target Start/End: Complemental strand, 26611633 - 26611561
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    ||||||||||||||||| ||||||||||||| | ||||||| ||||||||||  |||||||||||||||||||    
T  26611633 ttgaattttgctttgccaacacttttgagaaattaaatataattattataattataaatgatagaaaatattt 26611561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 174 - 294
Target Start/End: Complemental strand, 2198149 - 2198030
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattttnnnnnnntattatttcctaagaa 273  Q
    ||||| || ||| |||||||||||| ||||  ||||||||||||||| ||||| |||||| ||||||||||||||||       ||||||||| ||||||    
T  2198149 gtacatctatttcataaatcaataagttaaagatcatttttatgtaacaaagagctatttatcgacttttatatttt-agaaaatattatttcataagaa 2198051  T
Q  274 caaacatcatttaattgttta 294  Q
     |||||| |||| ||||||||    
T  2198050 aaaacataatttcattgttta 2198030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 336 - 406
Target Start/End: Complemental strand, 5078312 - 5078242
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    |||||||||| |||||||||||||||||||| ||||||||| |||||||||| ||||   |||||||||||    
T  5078312 ttgaattttgatttgccgacacttttgagaaataaaatataattattataattgtaatcaatagaaaatat 5078242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 336 - 406
Target Start/End: Complemental strand, 22734869 - 22734799
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    |||||||||| |||||||||||||||||||| ||||||||| |||||||||| ||||   |||||||||||    
T  22734869 ttgaattttgatttgccgacacttttgagaaataaaatataattattataattgtaaccaatagaaaatat 22734799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 336 - 406
Target Start/End: Complemental strand, 32715769 - 32715699
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    |||||||||| ||||||||||||||||| || ||||||||| |||||||||| |||| | |||||||||||    
T  32715769 ttgaattttgatttgccgacacttttgaaaaataaaatataattattataattgtaactaatagaaaatat 32715699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 3448140 - 3448216
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||| |||||||||||| ||| | ||||||||| |||||||||||| ||||| || |||||||||||||    
T  3448140 gtacacctatttcataaatcaataagttatcgatcatttttctgtaataaagaaatatttatcaacttttatatttt 3448216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 336 - 404
Target Start/End: Complemental strand, 10091651 - 10091583
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaat 404  Q
    |||||||||||||| ||||||| |||||||| ||||||||||||||||||||  ||||| ||| |||||    
T  10091651 ttgaattttgctttaccgacacatttgagaaataaaatatagttattataattttaaataatataaaat 10091583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 10091854 - 10091778
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||| |||||||||||||||||| || |||||||||||||||||   ||||| | ||||||||||||||    
T  10091854 gtacacctatttcataaatcaataaattaacgataatttttatgtaataaagtgatatttattgacttttatatttt 10091778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 477 - 622
Target Start/End: Original strand, 10324434 - 10324579
Alignment:
Q  477 ttaaggaagcaaatatagtaatcttgcattggaacttgtgcattcaacttctcaaaagtatnnnnnnnctgagattttcaacctaaaactttannnnnnn 576  Q
    ||||||| |||||||||||| | |||||||||||||||| ||||||||| ||||||||| |        |   ||||||||| |||||||||            
T  10324434 ttaaggatgcaaatatagtagtattgcattggaacttgtacattcaactcctcaaaagtctaaaaaaaatagtattttcaacttaaaactttcttttttt 10324533  T
Q  577 ggtttccttaaccattaccctaagggcatcggttaacataaccctt 622  Q
    |||||||||||||||| ||||||||||| || ||||||| ||||||    
T  10324534 ggtttccttaaccattgccctaagggcaccgattaacatgaccctt 10324579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 17698063 - 17697997
Alignment:
Q  183 ttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||||||||||||||||| || |||||||| |||||||||  ||||| ||||||||||||||||    
T  17698063 ttttataaatcaataaattaacgat-atttttatataataaagagatatttatcgacttttatatttt 17697997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 24215368 - 24215306
Alignment:
Q  188 taaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||| | |||||||| |||||||||||| ||||||||||||||| ||| ||||||||||||    
T  24215368 taaatctaaaaattaacaatcatttttatgaaataaagaactatttatcgtcttttatatttt 24215306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 336 - 406
Target Start/End: Original strand, 33610943 - 33611013
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatat 406  Q
    |||||||||| ||||| |||||||||||||| ||||||||| ||||||||||  ||| | |||||||||||    
T  33610943 ttgaattttgatttgcggacacttttgagaaataaaatataattattataattataattaatagaaaatat 33611013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 174 - 285
Target Start/End: Original strand, 33610740 - 33610850
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatattttnnnnnnntattatttcctaagaa 273  Q
    |||||||| |||||||||||||||  ||||  || ||||||||||||||||||  || |||| ||||||||||||||       ||||||||| ||||||    
T  33610740 gtacacctattttataaatcaatatgttaatgattatttttatgtaataaagagataattgttgacttttatatttt-agaaaatattatttcataagaa 33610838  T
Q  274 caaacatcattt 285  Q
     |||||||||||    
T  33610839 aaaacatcattt 33610850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 336 - 392
Target Start/End: Original strand, 3448487 - 3448543
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaa 392  Q
    |||||||||| |||||||||||||||||||| ||||||||  |||||||||| ||||    
T  3448487 ttgaattttgatttgccgacacttttgagaaataaaatatgattattataattgtaa 3448543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 250
Target Start/End: Complemental strand, 22735065 - 22734993
Alignment:
Q  178 acctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||| ||| |||||||||||| ||| | |||||||||||||||||||||  ||||| || |||||||||||||    
T  22735065 acctatttcataaatcaataagttatcgatcatttttatgtaataaagagatatttatcaacttttatatttt 22734993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 336 - 392
Target Start/End: Complemental strand, 31394352 - 31394296
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaa 392  Q
    |||||||||| |||| ||||||||||||||| ||||||||| |||||||||| ||||    
T  31394352 ttgaattttgatttgtcgacacttttgagaaataaaatataattattataattgtaa 31394296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 32715970 - 32715894
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||| |||| ||||||| ||||| |||||||||||||||||||||  | | | ||||||||||||||||    
T  32715970 gtacacctatttcataattcaataagttaacaatcatttttatgtaataaagagatgtctatcgacttttatatttt 32715894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 30020418 - 30020472
Alignment:
Q  196 taaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||||||| ||||||||| ||||||||||||||||| ||  ||||||||||    
T  30020418 taaattaactattatttttatgaaataaagaactatttgttgatatttatatttt 30020472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 250
Target Start/End: Complemental strand, 31394553 - 31394480
Alignment:
Q  177 cacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    ||||| ||| |||||||||||| ||| | |||||||| ||||||||||||  ||||| || |||||||||||||    
T  31394553 cacctatttcataaatcaataagttatcgatcattttaatgtaataaagagatatttatcaacttttatatttt 31394480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 5078514 - 5078438
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||| |||||| ||||| ||| | ||||||||| |||||||||||  ||||| || |||||||||||||    
T  5078514 gtacacctatttcataaataaataagttatcgatcatttttctgtaataaagagatatttatcaacttttatatttt 5078438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 198 - 250
Target Start/End: Original strand, 6265006 - 6265058
Alignment:
Q  198 aattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||||| ||||||||| ||||||||||||||||| ||  ||||||||||    
T  6265006 aattaactattatttttatggaataaagaactatttgttgatatttatatttt 6265058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 20469090 - 20469134
Alignment:
Q  189 aaatcaataaattaactatcatttttatgtaataaagaactattt 233  Q
    ||||| ||||||||||||||||||||||| |||||||| ||||||    
T  20469090 aaatctataaattaactatcatttttatgaaataaagagctattt 20469134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 26611835 - 26611759
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||||||| ||||||  | || ||||| || ||||||||||||||||||  ||||| |||||||| |||||||    
T  26611835 gtacacctgtttcataaatttacaagttaacgataatttttatgtaataaagagatatttatcgactttcatatttt 26611759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 27109052 - 27109106
Alignment:
Q  181 tgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgt 235  Q
    ||||||||||||  |||||||||| |||||||||||| ||||||||  |||||||    
T  27109052 tgttttataaatttataaattaacgatcatttttatgaaataaagagttatttgt 27109106  T

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Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 27150849 - 27150903
Alignment:
Q  181 tgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgt 235  Q
    ||||||||||||  |||||||||| |||||||||||| ||||||||  |||||||    
T  27150849 tgttttataaatttataaattaacgatcatttttatgaaataaagagttatttgt 27150903  T

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Target: scaffold0059 (Bit Score: 53; Significance: 5e-21; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 336 - 408
Target Start/End: Original strand, 70935 - 71007
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  70935 ttgaattttgctttgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 71007  T

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Target: scaffold0059; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 70733 - 70809
Alignment:
Q  174 gtacacctgttttataaatcaataaattaactatcatttttatgtaataaagaactatttgtcgacttttatatttt 250  Q
    |||||||| ||| ||||||| |||| |||||||| |||||||||| |||||    ||||| ||||||||||||||||    
T  70733 gtacacctatttcataaatctataagttaactataatttttatgtgataaacggatatttatcgacttttatatttt 70809  T

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Target: scaffold0008 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 336 - 408
Target Start/End: Original strand, 263068 - 263140
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  263068 ttgaattttgctttgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 263140  T

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Target: scaffold0190 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 336 - 408
Target Start/End: Original strand, 5941 - 6013
Alignment:
Q  336 ttgaattttgctttgccgacacttttgagaagtaaaatatagttattataatagtaaatgatagaaaatattt 408  Q
    ||||||||||||| |||||||||||||| || ||||||||| ||||||||||  |||||||||||||||||||    
T  5941 ttgaattttgcttcgccgacacttttgaaaaataaaatataattattataattataaatgatagaaaatattt 6013  T

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