View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4514_high_1 (Length: 569)

Name: NF4514_high_1
Description: NF4514
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4514_high_1
NF4514_high_1
[»] chr2 (42 HSPs)
chr2 (11-368)||(14487972-14488329)
chr2 (487-568)||(32522071-32522152)
chr2 (483-568)||(40301327-40301412)
chr2 (483-568)||(2401647-2401732)
chr2 (483-568)||(32366125-32366210)
chr2 (486-568)||(2757096-2757177)
chr2 (486-568)||(10574187-10574269)
chr2 (483-568)||(22898382-22898467)
chr2 (483-568)||(22422194-22422279)
chr2 (504-568)||(17531945-17532009)
chr2 (483-555)||(446427-446499)
chr2 (483-568)||(27881022-27881108)
chr2 (493-568)||(8441458-8441534)
chr2 (495-568)||(34913415-34913489)
chr2 (485-568)||(35515505-35515589)
chr2 (486-565)||(26440070-26440148)
chr2 (504-549)||(11776980-11777025)
chr2 (483-568)||(19683549-19683634)
chr2 (483-550)||(15155788-15155855)
chr2 (510-568)||(43796932-43796991)
chr2 (495-557)||(638208-638270)
chr2 (485-543)||(4026903-4026961)
chr2 (495-549)||(27703503-27703557)
chr2 (495-549)||(29133712-29133766)
chr2 (483-549)||(38471836-38471902)
chr2 (485-550)||(4090466-4090531)
chr2 (505-549)||(12683651-12683695)
chr2 (505-549)||(25836757-25836801)
chr2 (510-568)||(12238508-12238567)
chr2 (483-526)||(30382332-30382375)
chr2 (505-535)||(1768767-1768797)
chr2 (496-538)||(7480830-7480872)
chr2 (496-542)||(33321455-33321501)
chr2 (485-549)||(2790115-2790180)
chr2 (499-548)||(17546382-17546431)
chr2 (505-554)||(17797307-17797356)
chr2 (500-544)||(8832446-8832490)
chr2 (495-543)||(9140780-9140828)
chr2 (505-549)||(21788454-21788498)
chr2 (495-535)||(22727214-22727254)
chr2 (510-538)||(23956209-23956237)
chr2 (508-544)||(27709718-27709754)
[»] chr4 (53 HSPs)
chr4 (409-568)||(4603357-4603516)
chr4 (483-568)||(46176004-46176089)
chr4 (486-568)||(15184525-15184607)
chr4 (486-568)||(47202804-47202886)
chr4 (483-568)||(22117329-22117414)
chr4 (483-568)||(42617255-42617340)
chr4 (483-568)||(22303071-22303156)
chr4 (499-568)||(15179809-15179878)
chr4 (483-548)||(19414104-19414169)
chr4 (483-568)||(9201626-9201711)
chr4 (486-568)||(19725271-19725354)
chr4 (483-546)||(39931626-39931689)
chr4 (500-557)||(19298171-19298228)
chr4 (483-535)||(22823771-22823823)
chr4 (483-568)||(3966705-3966790)
chr4 (486-546)||(10794957-10795017)
chr4 (485-568)||(23297415-23297499)
chr4 (485-546)||(10796363-10796424)
chr4 (485-564)||(2702744-2702824)
chr4 (487-535)||(7673432-7673480)
chr4 (505-549)||(12495691-12495735)
chr4 (486-549)||(43415334-43415397)
chr4 (485-539)||(40699333-40699387)
chr4 (499-549)||(43213638-43213688)
chr4 (487-533)||(55802238-55802284)
chr4 (496-568)||(948060-948133)
chr4 (495-568)||(38345847-38345920)
chr4 (510-561)||(2141643-2141695)
chr4 (505-549)||(8130485-8130529)
chr4 (485-549)||(29877616-29877680)
chr4 (512-548)||(54412093-54412129)
chr4 (477-533)||(55802134-55802190)
chr4 (510-549)||(7148774-7148813)
chr4 (486-568)||(23284801-23284883)
chr4 (498-549)||(27368197-27368248)
chr4 (506-549)||(52700589-52700632)
chr4 (495-568)||(212973-213046)
chr4 (495-568)||(3564207-3564281)
chr4 (511-549)||(28074368-28074406)
chr4 (507-549)||(34526370-34526412)
chr4 (519-549)||(35010222-35010252)
chr4 (510-544)||(48591474-48591508)
chr4 (485-538)||(17222942-17222995)
chr4 (512-549)||(39932799-39932836)
chr4 (485-538)||(42153082-42153135)
chr4 (505-538)||(43699389-43699422)
chr4 (495-539)||(9319043-9319087)
chr4 (510-538)||(12495589-12495617)
chr4 (510-538)||(24101885-24101913)
chr4 (513-549)||(26206399-26206435)
chr4 (486-538)||(31022380-31022432)
chr4 (505-537)||(41071364-41071396)
chr4 (485-549)||(43699528-43699592)
[»] chr1 (58 HSPs)
chr1 (114-365)||(573426-573669)
chr1 (483-568)||(5243429-5243514)
chr1 (483-568)||(32497297-32497382)
chr1 (486-568)||(15791362-15791444)
chr1 (487-568)||(17628450-17628531)
chr1 (486-568)||(17814169-17814251)
chr1 (483-567)||(22088438-22088522)
chr1 (483-568)||(3116087-3116172)
chr1 (483-568)||(5347130-5347215)
chr1 (483-568)||(19220149-19220234)
chr1 (483-566)||(17348855-17348938)
chr1 (487-568)||(13412478-13412559)
chr1 (483-568)||(15235186-15235271)
chr1 (486-568)||(22103087-22103171)
chr1 (486-568)||(35275923-35276007)
chr1 (17-75)||(573772-573830)
chr1 (487-549)||(15631883-15631945)
chr1 (495-557)||(20169251-20169313)
chr1 (19-75)||(573672-573728)
chr1 (486-566)||(16225487-16225567)
chr1 (514-568)||(8410155-8410209)
chr1 (493-549)||(19284881-19284937)
chr1 (486-562)||(52363863-52363939)
chr1 (494-568)||(26542959-26543034)
chr1 (512-568)||(41003391-41003449)
chr1 (495-545)||(26435224-26435273)
chr1 (495-568)||(9572809-9572884)
chr1 (506-568)||(10082248-10082311)
chr1 (510-568)||(36423006-36423065)
chr1 (486-568)||(37148118-37148201)
chr1 (486-568)||(37156943-37157026)
chr1 (505-542)||(18327521-18327558)
chr1 (505-538)||(20169377-20169410)
chr1 (485-554)||(47413470-47413538)
chr1 (505-549)||(35282639-35282683)
chr1 (496-540)||(35590118-35590162)
chr1 (505-549)||(35897668-35897712)
chr1 (493-568)||(51162254-51162330)
chr1 (486-568)||(1265718-1265801)
chr1 (517-568)||(16888991-16889042)
chr1 (495-538)||(22593337-22593380)
chr1 (510-549)||(22593452-22593491)
chr1 (483-549)||(42363577-42363641)
chr1 (510-549)||(42831376-42831415)
chr1 (510-549)||(51409752-51409791)
chr1 (483-549)||(12256582-12256648)
chr1 (513-543)||(39658382-39658412)
chr1 (487-568)||(42591361-42591443)
chr1 (495-549)||(46501046-46501100)
chr1 (483-549)||(49971226-49971292)
chr1 (505-549)||(391165-391210)
chr1 (507-568)||(28690001-28690065)
chr1 (485-538)||(41196630-41196683)
chr1 (505-549)||(4068112-4068156)
chr1 (493-549)||(16708784-16708840)
chr1 (486-568)||(26946129-26946213)
chr1 (485-549)||(29333394-29333458)
chr1 (294-334)||(46357952-46357992)
[»] chr3 (42 HSPs)
chr3 (139-358)||(49244617-49244828)
chr3 (483-568)||(3645278-3645363)
chr3 (486-568)||(29614172-29614254)
chr3 (483-568)||(4257327-4257412)
chr3 (483-565)||(20894478-20894560)
chr3 (483-554)||(28623274-28623345)
chr3 (483-566)||(36266219-36266303)
chr3 (486-568)||(29830795-29830878)
chr3 (486-549)||(30499944-30500007)
chr3 (484-568)||(37456459-37456543)
chr3 (31-75)||(49244840-49244884)
chr3 (486-549)||(17383483-17383546)
chr3 (483-549)||(10448749-10448815)
chr3 (485-550)||(2086735-2086800)
chr3 (513-568)||(38524093-38524149)
chr3 (485-544)||(23555461-23555520)
chr3 (486-553)||(32983212-32983278)
chr3 (502-561)||(46091127-46091186)
chr3 (495-568)||(3876288-3876362)
chr3 (499-549)||(24842152-24842202)
chr3 (495-549)||(40581122-40581176)
chr3 (485-547)||(53261794-53261856)
chr3 (504-549)||(30917539-30917584)
chr3 (505-568)||(37778134-37778194)
chr3 (485-549)||(4974288-4974352)
chr3 (485-549)||(24841432-24841496)
chr3 (486-568)||(1516123-1516205)
chr3 (515-549)||(42956224-42956258)
chr3 (494-536)||(53787681-53787723)
chr3 (495-536)||(3876193-3876234)
chr3 (485-534)||(20685748-20685797)
chr3 (505-549)||(22809238-22809283)
chr3 (495-544)||(25341269-25341318)
chr3 (495-544)||(33946592-33946641)
chr3 (496-549)||(53218085-53218138)
chr3 (496-544)||(585008-585056)
chr3 (513-549)||(5129860-5129896)
chr3 (505-568)||(11528888-11528952)
chr3 (513-568)||(21296771-21296827)
chr3 (513-557)||(24521242-24521286)
chr3 (513-549)||(30199001-30199037)
chr3 (513-568)||(41601356-41601412)
[»] chr8 (46 HSPs)
chr8 (486-568)||(42102085-42102167)
chr8 (483-568)||(12607055-12607140)
chr8 (483-568)||(37410938-37411023)
chr8 (483-568)||(42363342-42363427)
chr8 (483-568)||(38338876-38338961)
chr8 (483-566)||(38195462-38195545)
chr8 (499-567)||(29243090-29243158)
chr8 (496-564)||(11988185-11988253)
chr8 (486-568)||(218278-218360)
chr8 (486-568)||(694838-694920)
chr8 (486-568)||(699047-699129)
chr8 (486-568)||(731901-731983)
chr8 (486-568)||(855797-855879)
chr8 (483-568)||(3129981-3130069)
chr8 (483-554)||(3664111-3664182)
chr8 (498-568)||(42666988-42667058)
chr8 (483-568)||(32751113-32751198)
chr8 (487-566)||(19925536-19925616)
chr8 (483-568)||(35055393-35055480)
chr8 (486-567)||(43577199-43577281)
chr8 (483-540)||(29713165-29713222)
chr8 (486-546)||(2019697-2019757)
chr8 (485-549)||(14942401-14942465)
chr8 (496-568)||(19327855-19327927)
chr8 (510-568)||(2669650-2669709)
chr8 (486-568)||(32131418-32131501)
chr8 (510-568)||(35453412-35453471)
chr8 (495-549)||(16706145-16706199)
chr8 (485-568)||(2563335-2563419)
chr8 (485-568)||(30973966-30974050)
chr8 (485-568)||(36907669-36907757)
chr8 (510-549)||(9131173-9131212)
chr8 (486-549)||(19925433-19925496)
chr8 (510-568)||(28280711-28280770)
chr8 (510-549)||(28879060-28879099)
chr8 (510-549)||(32213067-32213106)
chr8 (519-549)||(402133-402163)
chr8 (513-547)||(35123108-35123142)
chr8 (510-543)||(2289937-2289970)
chr8 (510-539)||(10213727-10213756)
chr8 (496-549)||(13131418-13131471)
chr8 (495-536)||(24866881-24866922)
chr8 (495-536)||(28280824-28280865)
chr8 (496-549)||(35285916-35285969)
chr8 (513-549)||(1089018-1089054)
chr8 (513-549)||(13265489-13265525)
[»] chr7 (42 HSPs)
chr7 (483-568)||(24371432-24371517)
chr7 (483-568)||(28004559-28004644)
chr7 (483-568)||(25536253-25536338)
chr7 (483-568)||(35246647-35246732)
chr7 (483-568)||(14675985-14676069)
chr7 (483-568)||(16958791-16958876)
chr7 (483-568)||(16932955-16933040)
chr7 (483-568)||(16938338-16938423)
chr7 (483-568)||(23137188-23137273)
chr7 (493-568)||(991485-991560)
chr7 (483-568)||(48949696-48949781)
chr7 (487-568)||(1312093-1312174)
chr7 (486-565)||(44799382-44799460)
chr7 (483-568)||(2194069-2194155)
chr7 (483-549)||(22032737-22032803)
chr7 (486-549)||(22575564-22575627)
chr7 (483-568)||(19913920-19914006)
chr7 (504-568)||(21027538-21027603)
chr7 (495-568)||(44613498-44613572)
chr7 (486-566)||(38372536-38372617)
chr7 (485-549)||(35809067-35809131)
chr7 (510-568)||(29378647-29378706)
chr7 (505-567)||(34922928-34922991)
chr7 (495-549)||(12473193-12473247)
chr7 (495-549)||(41677361-41677415)
chr7 (512-549)||(21249160-21249197)
chr7 (495-544)||(25907766-25907815)
chr7 (485-538)||(34923046-34923099)
chr7 (496-536)||(37779336-37779376)
chr7 (510-549)||(47511045-47511084)
chr7 (495-538)||(49104298-49104341)
chr7 (510-544)||(1054118-1054152)
chr7 (486-540)||(7775342-7775396)
chr7 (510-544)||(33288149-33288183)
chr7 (510-544)||(41037755-41037789)
chr7 (511-549)||(42083462-42083500)
chr7 (505-549)||(20888570-20888615)
chr7 (495-536)||(22032877-22032918)
chr7 (495-536)||(43818808-43818849)
chr7 (510-547)||(46743952-46743989)
chr7 (485-549)||(18260890-18260954)
chr7 (485-549)||(18837199-18837263)
[»] chr5 (55 HSPs)
chr5 (483-568)||(5203459-5203544)
chr5 (483-568)||(33667418-33667503)
chr5 (483-568)||(33757063-33757148)
chr5 (483-568)||(15122520-15122605)
chr5 (483-567)||(20458584-20458668)
chr5 (483-568)||(780593-780678)
chr5 (487-568)||(4728825-4728906)
chr5 (483-568)||(15709917-15710002)
chr5 (483-568)||(17668375-17668460)
chr5 (487-568)||(2531305-2531386)
chr5 (483-566)||(16722002-16722085)
chr5 (486-549)||(26002975-26003038)
chr5 (495-549)||(10537264-10537318)
chr5 (483-548)||(13164797-13164861)
chr5 (486-566)||(15413970-15414051)
chr5 (481-568)||(6026010-6026097)
chr5 (483-546)||(6008327-6008390)
chr5 (483-549)||(43318978-43319044)
chr5 (483-535)||(38498567-38498619)
chr5 (486-549)||(17128256-17128319)
chr5 (510-549)||(40697003-40697042)
chr5 (495-549)||(29922234-29922288)
chr5 (484-549)||(22201981-22202046)
chr5 (496-549)||(24030203-24030256)
chr5 (486-568)||(25332263-25332346)
chr5 (495-549)||(1473343-1473397)
chr5 (495-549)||(22573640-22573694)
chr5 (503-568)||(36106764-36106830)
chr5 (505-549)||(11991302-11991346)
chr5 (486-549)||(13739254-13739318)
chr5 (505-568)||(14243820-14243884)
chr5 (505-549)||(42852019-42852063)
chr5 (495-534)||(589270-589309)
chr5 (506-549)||(2878721-2878764)
chr5 (498-549)||(27981957-27982008)
chr5 (499-549)||(1031411-1031461)
chr5 (495-568)||(2670062-2670136)
chr5 (496-538)||(3977586-3977628)
chr5 (507-549)||(7984104-7984146)
chr5 (511-549)||(29418797-29418835)
chr5 (487-564)||(40416001-40416079)
chr5 (511-549)||(43268666-43268704)
chr5 (485-546)||(341967-342028)
chr5 (510-543)||(1943012-1943045)
chr5 (496-549)||(11163314-11163367)
chr5 (512-549)||(17657246-17657283)
chr5 (495-536)||(29659175-29659216)
chr5 (504-549)||(30852167-30852212)
chr5 (485-538)||(41059709-41059762)
chr5 (485-541)||(1576608-1576664)
chr5 (485-541)||(1608151-1608207)
chr5 (482-538)||(2577345-2577401)
chr5 (513-549)||(12467269-12467305)
chr5 (506-549)||(23087824-23087865)
chr5 (513-549)||(41534628-41534664)
[»] chr6 (34 HSPs)
chr6 (483-568)||(1468151-1468236)
chr6 (483-568)||(10184355-10184440)
chr6 (486-568)||(17914924-17915006)
chr6 (486-564)||(32615444-32615522)
chr6 (483-568)||(4808547-4808632)
chr6 (495-568)||(17300764-17300837)
chr6 (499-567)||(23314840-23314908)
chr6 (499-567)||(23325007-23325075)
chr6 (513-568)||(32165286-32165341)
chr6 (483-568)||(9894741-9894827)
chr6 (483-567)||(10401814-10401898)
chr6 (483-549)||(6632634-6632700)
chr6 (487-549)||(34223570-34223632)
chr6 (510-568)||(2034254-2034313)
chr6 (495-557)||(22816622-22816684)
chr6 (505-549)||(30533977-30534021)
chr6 (505-542)||(3211053-3211090)
chr6 (512-549)||(9582501-9582538)
chr6 (499-568)||(21871309-21871378)
chr6 (486-568)||(10619207-10619288)
chr6 (493-549)||(21610094-21610150)
chr6 (486-549)||(715970-716033)
chr6 (510-549)||(10054383-10054422)
chr6 (510-568)||(21025252-21025311)
chr6 (486-541)||(25430816-25430871)
chr6 (499-541)||(6593092-6593134)
chr6 (495-541)||(10687294-10687340)
chr6 (507-549)||(28758366-28758408)
chr6 (495-568)||(29623502-29623576)
chr6 (504-549)||(7267771-7267816)
chr6 (505-538)||(22816525-22816558)
chr6 (499-543)||(4272373-4272417)
chr6 (496-536)||(6776923-6776963)
chr6 (513-553)||(10020974-10021014)
[»] scaffold0048 (1 HSPs)
scaffold0048 (483-560)||(59243-59320)
[»] scaffold0006 (2 HSPs)
scaffold0006 (483-568)||(279017-279102)
scaffold0006 (483-568)||(40703-40787)
[»] scaffold0100 (1 HSPs)
scaffold0100 (483-568)||(38478-38563)
[»] scaffold0004 (1 HSPs)
scaffold0004 (483-568)||(242665-242750)
[»] scaffold1130 (1 HSPs)
scaffold1130 (487-568)||(2228-2308)
[»] scaffold0057 (1 HSPs)
scaffold0057 (495-544)||(43866-43915)
[»] scaffold0012 (1 HSPs)
scaffold0012 (506-568)||(178498-178561)
[»] scaffold0157 (2 HSPs)
scaffold0157 (505-549)||(24742-24786)
scaffold0157 (510-538)||(24860-24888)
[»] scaffold1088 (1 HSPs)
scaffold1088 (486-568)||(1272-1355)
[»] scaffold0332 (1 HSPs)
scaffold0332 (510-557)||(14783-14830)
[»] scaffold1367 (1 HSPs)
scaffold1367 (497-543)||(1047-1093)
[»] scaffold0299 (1 HSPs)
scaffold0299 (497-543)||(11351-11397)
[»] scaffold0015 (1 HSPs)
scaffold0015 (496-538)||(48559-48601)
[»] scaffold0180 (1 HSPs)
scaffold0180 (303-375)||(23033-23105)


Alignment Details
Target: chr2 (Bit Score: 290; Significance: 1e-162; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 11 - 368
Target Start/End: Complemental strand, 14488329 - 14487972
Alignment:
Q  11 caaagggtataaaaaatcatagaaacaaagatgaagaacaaagggtttctagatttccataacctgagnnnnnnntcattgcaggcgatgttagatggtc 110  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||       ||||||||||||||||||||  |||    
T  14488329 caaagggtataaaaaatcatagaaacaaagatgaagaacaaaggttttctagatttccata-cctgagaaaaaaatcattgcaggcgatgttagactgtc 14488231  T
Q  111 aacaactattttatttgtggtgtgtgagactttcttgttttttattccattttaaagaaattaaattaacaatgaaaa-gtacaaacaagggaagaatga 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||    
T  14488230 aacaactattttatttgtggtgtgtgagactttcttgttttttattctattttaaagaaattaaattaacaatgaaaaagtacaaacaagggaagaagga 14488131  T
Q  210 gaattcgggactatcaatcctatgttgttgctcatggaggtgagtgggatggaggagagagaatgataattgatgatggtgtgtaaaaagatatagtgta 309  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14488130 gaattcgggaatgtcaatcctatgttgttgctcatggaggtgagtgggatggaggagagagaatgataattgatgatggtgtgtaaaaagatatagtgta 14488031  T
Q  310 gagagactatgataaaagtgtgttccataatcgatctaatggttaaaaagtaactttcc 368  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  14488030 gagagactatgataaaagtgtgttccataatcaatctaatggttaaaaagtaactttcc 14487972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 487 - 568
Target Start/End: Complemental strand, 32522152 - 32522071
Alignment:
Q  487 ttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32522152 ttattttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttataattttttaaggtagtttatg 32522071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 483 - 568
Target Start/End: Original strand, 40301327 - 40301412
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  40301327 tagcttattttagagcttataaaaaacagcttatgcaaataaataagtttttatgtattatttataagtttttaaggtagtttatg 40301412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 483 - 568
Target Start/End: Complemental strand, 2401732 - 2401647
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||| ||||||| ||||||||||||||||||    
T  2401732 tagcttattttagagcttatataaaacagcttatgcaaataaatatatttttatgtattgtttataagtttttaaggtagtttatg 2401647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 483 - 568
Target Start/End: Original strand, 32366125 - 32366210
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  32366125 tagcttattttagagcttatataaaataacttatgcaaataaataagtttttatgtattatttataagttttaaaggtagtttatg 32366210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 486 - 568
Target Start/End: Complemental strand, 2757177 - 2757096
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||    
T  2757177 cttattttagagcttatataaaacagcttatgcaaataaataag-ttttatgtattatttataagtttttaaagtagtttatg 2757096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 486 - 568
Target Start/End: Complemental strand, 10574269 - 10574187
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    |||||| ||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||    
T  10574269 cttattttagagtttatataaaacagcttatgcaaatacataagtttttatctattatttataagtttttaaggtagtttatg 10574187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 483 - 568
Target Start/End: Complemental strand, 22898467 - 22898382
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| |||||||||||||||| | ||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||    
T  22898467 tagcttattttagagcttatataaaataacttatgcaaataaatacatttttatgtattatttataaatttttaaggtagtttatg 22898382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 483 - 568
Target Start/End: Complemental strand, 22422279 - 22422194
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| ||||| |||||| ||| || |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  22422279 tagcttattttagagtttatatgaaagagtttatgcaaataaataagtttttatatattatttataagtttttaaggtagtttatg 22422194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 504 - 568
Target Start/End: Original strand, 17531945 - 17532009
Alignment:
Q  504 taaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  17531945 taaaacagcttatgcaaataaataagtttttatgtattatctataagtttttaaggtagtttatg 17532009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 483 - 555
Target Start/End: Original strand, 446427 - 446499
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataatttttt 555  Q
    ||||||||| || ||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||    
T  446427 tagcttattttatagcttatataaaacaacttatgcaaataaataagtttttatatattatttataagttttt 446499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 483 - 568
Target Start/End: Complemental strand, 27881108 - 27881022
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagtttatg 568  Q
    ||||||||| ||||||||||  |||| |||||||||||||||||| ||| ||||||||||||||||| ||| ||||||||| |||||    
T  27881108 tagcttattttagagcttatgcaaaatagcttatgcaaataaatatgttattatgtattatttataagtttattaaggtagcttatg 27881022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 493 - 568
Target Start/End: Original strand, 8441458 - 8441534
Alignment:
Q  493 tagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagtttatg 568  Q
    ||||||||||  ||| ||||||||||||||||||| ||||||||||||||||||||| ||| |||| ||||||||||    
T  8441458 tagagcttatgcaaagcagcttatgcaaataaatatgtttttatgtattatttataagtttgttaatgtagtttatg 8441534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 495 - 568
Target Start/End: Complemental strand, 34913489 - 34913415
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagtttatg 568  Q
    ||||||||  ||||||||||||||||||||||||| |||||||||||||| |||| ||| ||||| |||||||||    
T  34913489 gagcttatgcaaaacagcttatgcaaataaataagcttttatgtattattcataagtttgttaagatagtttatg 34913415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 485 - 568
Target Start/End: Complemental strand, 35515589 - 35515505
Alignment:
Q  485 gcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagtttatg 568  Q
    ||||||| |||||||||| |||||||| ||| | ||||||||| || |||||||||||||||||| ||| |||| ||||||||||    
T  35515589 gcttattttagagcttatgtaaaacagtttacgtaaataaatatgtctttatgtattatttataagtttgttaatgtagtttatg 35515505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 486 - 565
Target Start/End: Original strand, 26440070 - 26440148
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagttt 565  Q
    |||||| || ||||||||||||| || |||||||||||||||||||||||| |||||||||||  |||||| ||| ||||    
T  26440070 cttattttaaagcttatataaaa-agtttatgcaaataaataagtttttatatattatttatagatttttagggtcgttt 26440148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 504 - 549
Target Start/End: Original strand, 11776980 - 11777025
Alignment:
Q  504 taaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||    
T  11776980 taaaacagcttatgcatataaataagcttttatgtattatttataa 11777025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 483 - 568
Target Start/End: Original strand, 19683549 - 19683634
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    |||||| || |||||||||  ||||| | |||||| |||||||| |||||||||||||||| ||||| ||| ||| ||||||||||    
T  19683549 tagcttgttttagagcttacgtaaaataacttatgtaaataaatgagtttttatgtattatatataagtttataaagtagtttatg 19683634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 483 - 550
Target Start/End: Original strand, 15155788 - 15155855
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataat 550  Q
    ||||||||| ||  |||||| ||||||| |||||| ||||||||| | ||||||||||||||||||||    
T  15155788 tagcttattttaaggcttatgtaaaacaacttatgaaaataaatatgcttttatgtattatttataat 15155855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 510 - 568
Target Start/End: Original strand, 43796932 - 43796991
Alignment:
Q  510 agcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagtttatg 568  Q
    |||||||| |||||||||||| || ||||||||||||||| ||| |||||||||||||||    
T  43796932 agcttatgtaaataaataagtattaatgtattatttataagtttgttaaggtagtttatg 43796991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 495 - 557
Target Start/End: Complemental strand, 638270 - 638208
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaa 557  Q
    |||||||| ||||| || |||||||||||||||| |||||||||||| || |||| |||||||    
T  638270 gagcttatgtaaaatagtttatgcaaataaataaatttttatgtattgttcataaatttttaa 638208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 485 - 543
Target Start/End: Original strand, 4026903 - 4026961
Alignment:
Q  485 gcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattat 543  Q
    ||||||| | ||||||||  ||||| ||||||||||||||||||| |||||||||||||    
T  4026903 gcttatttttgagcttatgcaaaactgcttatgcaaataaataagcttttatgtattat 4026961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 495 - 549
Target Start/End: Complemental strand, 27703557 - 27703503
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||||  ||||||||||||||||||||||||| |||||| ||||||| ||||    
T  27703557 gagcttatgcaaaacagcttatgcaaataaataagcttttatatattattcataa 27703503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 495 - 549
Target Start/End: Complemental strand, 29133766 - 29133712
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    |||||||||||||| || ||||||||||||||||  |||||||||||||| ||||    
T  29133766 gagcttatataaaatagtttatgcaaataaataatcttttatgtattattcataa 29133712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 549
Target Start/End: Complemental strand, 38471902 - 38471836
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||||| | ||||||||  ||||||||||||||||||||||| | |||||||| |||| |||||    
T  38471902 tagcttattttcgagcttatgcaaaacagcttatgcaaataaatatgcttttatgtgttatgtataa 38471836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 485 - 550
Target Start/End: Original strand, 4090466 - 4090531
Alignment:
Q  485 gcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataat 550  Q
    ||||||| | ||||||||  ||||||||||||||||||||||||  ||| |||||||||| |||||    
T  4090466 gcttatttttgagcttatgcaaaacagcttatgcaaataaataaactttgatgtattattcataat 4090531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 505 - 549
Target Start/End: Complemental strand, 12683695 - 12683651
Alignment:
Q  505 aaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||| ||||||||||||||||||||| |||||||||| ||||    
T  12683695 aaaacagattatgcaaataaataagttttaatgtattattcataa 12683651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 505 - 549
Target Start/End: Complemental strand, 25836801 - 25836757
Alignment:
Q  505 aaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||||||||||||||||||| | |||||||||||||| ||||    
T  25836801 aaaacagcttatgcaaataaatatgcttttatgtattattcataa 25836757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 568
Target Start/End: Complemental strand, 12238567 - 12238508
Alignment:
Q  510 agcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagtttatg 568  Q
    ||||||||||||||||||||  || |||||||||||||||  || |||||||||||||||    
T  12238567 agcttatgcaaataaataagcattaatgtattatttataagcttgttaaggtagtttatg 12238508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 483 - 526
Target Start/End: Complemental strand, 30382375 - 30382332
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaat 526  Q
    ||||||||| ||||||||||||| |||| |||||||||||||||    
T  30382375 tagcttattttagagcttatatataacaacttatgcaaataaat 30382332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 505 - 535
Target Start/End: Original strand, 1768767 - 1768797
Alignment:
Q  505 aaaacagcttatgcaaataaataagttttta 535  Q
    |||||||||||||||||||||||||||||||    
T  1768767 aaaacagcttatgcaaataaataagttttta 1768797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 496 - 538
Target Start/End: Original strand, 7480830 - 7480872
Alignment:
Q  496 agcttatataaaacagcttatgcaaataaataagtttttatgt 538  Q
    |||||||| |||| || ||||||||||||||||||||||||||    
T  7480830 agcttataaaaaatagattatgcaaataaataagtttttatgt 7480872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 496 - 542
Target Start/End: Complemental strand, 33321501 - 33321455
Alignment:
Q  496 agcttatataaaacagcttatgcaaataaataagtttttatgtatta 542  Q
    |||||||  |||||| ||||||||||||| |||||||||||||||||    
T  33321501 agcttatgcaaaacaacttatgcaaataattaagtttttatgtatta 33321455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 485 - 549
Target Start/End: Complemental strand, 2790180 - 2790115
Alignment:
Q  485 gcttattctagagcttatataaaacagcttatgcaaataaat-aagtttttatgtattatttataa 549  Q
    ||||||| | ||||||||  |||||||||||||||||||||| ||| ||||||| |||||| ||||    
T  2790180 gcttatttttgagcttatgcaaaacagcttatgcaaataaataaagcttttatgcattattgataa 2790115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 548
Target Start/End: Original strand, 17546382 - 17546431
Alignment:
Q  499 ttatataaaacagcttatgcaaataaataagtttttatgtattatttata 548  Q
    |||||||||||| ||||| ||| | ||||| |||||||||||||||||||    
T  17546382 ttatataaaacaacttatacaattgaataaatttttatgtattatttata 17546431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 554
Target Start/End: Complemental strand, 17797356 - 17797307
Alignment:
Q  505 aaaacagcttatgcaaataaataagtttttatgtattatttataattttt 554  Q
    ||||||| |||||||||||||||||||| |||| | ||||||||| ||||    
T  17797356 aaaacagtttatgcaaataaataagtttgtatgaactatttataagtttt 17797307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 500 - 544
Target Start/End: Original strand, 8832446 - 8832490
Alignment:
Q  500 tatataaaacagcttatgcaaataaataagtttttatgtattatt 544  Q
    |||| |||||||||||  |||||||||||| ||||||||||||||    
T  8832446 tataaaaaacagcttaaacaaataaataagcttttatgtattatt 8832490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 495 - 543
Target Start/End: Complemental strand, 9140828 - 9140780
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataagtttttatgtattat 543  Q
    ||||||||| |||||| | |||||||||||||||  |||||||||||||    
T  9140828 gagcttatacaaaacatcgtatgcaaataaataaccttttatgtattat 9140780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 505 - 549
Target Start/End: Original strand, 21788454 - 21788498
Alignment:
Q  505 aaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    |||||| |||||||||||||||||| |||||| ||||||| ||||    
T  21788454 aaaacatcttatgcaaataaataagcttttatttattattcataa 21788498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 495 - 535
Target Start/End: Original strand, 22727214 - 22727254
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataagttttta 535  Q
    |||||||| ||||| ||||||||||||||||| ||||||||    
T  22727214 gagcttatgtaaaatagcttatgcaaataaattagttttta 22727254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 510 - 538
Target Start/End: Original strand, 23956209 - 23956237
Alignment:
Q  510 agcttatgcaaataaataagtttttatgt 538  Q
    |||||||||||||||||||||||||||||    
T  23956209 agcttatgcaaataaataagtttttatgt 23956237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 508 - 544
Target Start/End: Complemental strand, 27709754 - 27709718
Alignment:
Q  508 acagcttatgcaaataaataagtttttatgtattatt 544  Q
    |||||||||||||||||||||| |||||| |||||||    
T  27709754 acagcttatgcaaataaataagcttttatatattatt 27709718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 132; Significance: 3e-68; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 409 - 568
Target Start/End: Complemental strand, 4603516 - 4603357
Alignment:
Q  409 caaaaagagtttatgtgtatcccatctagtactgtgttgattatatcaaaaaatcgatagacaaaataatacgatagcttattctagagcttatataaaa 508  Q
    |||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||    
T  4603516 caaaaaaagtttatatgtatcccatctagtactatgttgattatatcaaaaaatcgatagacaaaataatacgatagtttattttaaagcttatataaaa 4603417  T
Q  509 cagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4603416 caacttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 4603357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 483 - 568
Target Start/End: Complemental strand, 46176089 - 46176004
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  46176089 tagcttattttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataaatttttaaggtagtttatg 46176004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 486 - 568
Target Start/End: Original strand, 15184525 - 15184607
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15184525 cttattttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttataattttttaaagtagtttatg 15184607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 486 - 568
Target Start/End: Original strand, 47202804 - 47202886
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  47202804 cttattttatagcttatataaaacagcttatgcaaataaataagtttttatgtattacttataaatttttaaggtagtttatg 47202886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 483 - 568
Target Start/End: Original strand, 22117329 - 22117414
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||    
T  22117329 tagcttattttagagcttatataaaacaacttatgcaaataaatacatttttatgtattatttataagtttttaaggtagtttatg 22117414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 483 - 568
Target Start/End: Complemental strand, 42617340 - 42617255
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||    
T  42617340 tagcttattttagagcttatacaaaacagcttatgcaaataaatacgtttttaagtattatttataagtttttaaggtagtttatg 42617255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 483 - 568
Target Start/End: Original strand, 22303071 - 22303156
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||    
T  22303071 tagcttattttagagcttttataaaacagtttatgcaaataaataagtttttatgtattatttataaattttttacgtagtttatg 22303156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 499 - 568
Target Start/End: Original strand, 15179809 - 15179878
Alignment:
Q  499 ttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||    
T  15179809 ttatataaaacagcttatgcaaataaatatatttttatgtattatttataagtttttaaggtagtttatg 15179878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 483 - 548
Target Start/End: Original strand, 19414104 - 19414169
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttata 548  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19414104 tagcttattttagagcttatagaaaacagcttatgcaaataaataagtttttatgtattatttata 19414169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 483 - 568
Target Start/End: Original strand, 9201626 - 9201711
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| ||||| |||||||||| | |||||||||||||||||||||||||||||||||||||| |||| ||| || ||||||    
T  9201626 tagcttattttagagtttatataaaataacttatgcaaataaataagtttttatgtattatttataagttttcaagctattttatg 9201711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 486 - 568
Target Start/End: Original strand, 19725271 - 19725354
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagtttatg 568  Q
    |||||| ||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||| ||| |||||||| ||||||    
T  19725271 cttattttagagcttatacaaaacagcttatgcaattaaatacgtttttatgtattatttataagtttgttaaggtattttatg 19725354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 483 - 546
Target Start/End: Complemental strand, 39931689 - 39931626
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattattta 546  Q
    |||| |||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  39931689 tagcatattttaaagcttatataaaacagcttctgcaaataaataagtttttatgtattattta 39931626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 500 - 557
Target Start/End: Complemental strand, 19298228 - 19298171
Alignment:
Q  500 tatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaa 557  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||    
T  19298228 tatataaaacaacttatgcaaataaataaatttttatgtattatttataagtttttaa 19298171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 483 - 535
Target Start/End: Original strand, 22823771 - 22823823
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagttttta 535  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  22823771 tagcttattttagagcttatataaaacaacttatgcaaataaataagttttta 22823823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 483 - 568
Target Start/End: Original strand, 3966705 - 3966790
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| ||| ||||||||||||  |||||||||||||||||| |||||||||||| || |||| |||| ||| || ||||||    
T  3966705 tagcttattttagggcttatataaaatggcttatgcaaataaataaatttttatgtattgttcataagttttcaagctattttatg 3966790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 10795017 - 10794957
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattattta 546  Q
    |||||| ||||||||||  |||||||||| || ||||||||||||||||||||||||||||    
T  10795017 cttattttagagcttatgcaaaacagcttgtgtaaataaataagtttttatgtattattta 10794957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 485 - 568
Target Start/End: Original strand, 23297415 - 23297499
Alignment:
Q  485 gcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagtttatg 568  Q
    ||||||| | ||||||||  |||| |||||||||||||||||||| |||||||||||||| |||| ||| | |||||||||||||    
T  23297415 gcttatttttgagcttatgcaaaatagcttatgcaaataaataagcttttatgtattattcataagtttgtcaaggtagtttatg 23297499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 485 - 546
Target Start/End: Original strand, 10796363 - 10796424
Alignment:
Q  485 gcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattattta 546  Q
    ||||||| ||||||||||  |||||| ||| || ||||||||||||||||||||||||||||    
T  10796363 gcttattttagagcttatgcaaaacaacttgtgtaaataaataagtttttatgtattattta 10796424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 485 - 564
Target Start/End: Complemental strand, 2702824 - 2702744
Alignment:
Q  485 gcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagtt 564  Q
    ||||||| ||||||||||  ||| ||||||||||| |||||||||| ||  |||||||||||||| ||| |||||||||||    
T  2702824 gcttattttagagcttatgcaaagcagcttatgcacataaataagtattagtgtattatttataagtttgttaaggtagtt 2702744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 487 - 535
Target Start/End: Original strand, 7673432 - 7673480
Alignment:
Q  487 ttattctagagcttatataaaacagcttatgcaaataaataagttttta 535  Q
    ||||| ||||||||||| ||||||| |||||||||||||||||||||||    
T  7673432 ttattttagagcttataaaaaacagtttatgcaaataaataagttttta 7673480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 505 - 549
Target Start/End: Complemental strand, 12495735 - 12495691
Alignment:
Q  505 aaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||    
T  12495735 aaaacagcttatgcaaataaataagcttttatgtattattcataa 12495691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 486 - 549
Target Start/End: Complemental strand, 43415397 - 43415334
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    |||||| | |||||||  ||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  43415397 cttatttttgagcttaagtaaaacaacttctgcaaataaataagtttttatgtattattcataa 43415334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 485 - 539
Target Start/End: Original strand, 40699333 - 40699387
Alignment:
Q  485 gcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgta 539  Q
    ||||||| | ||||||||  |||||||||||||||||||||||| ||||||||||    
T  40699333 gcttattattgagcttatgcaaaacagcttatgcaaataaataaatttttatgta 40699387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 499 - 549
Target Start/End: Complemental strand, 43213688 - 43213638
Alignment:
Q  499 ttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    |||||||||| || |||| ||||||||||| ||||||||||||||||||||    
T  43213688 ttatataaaatagtttatacaaataaataattttttatgtattatttataa 43213638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 487 - 533
Target Start/End: Complemental strand, 55802284 - 55802238
Alignment:
Q  487 ttattctagagcttatataaaacagcttatgcaaataaataagtttt 533  Q
    ||||| ||||||||||||||||||| |||||||||||||||| ||||    
T  55802284 ttattttagagcttatataaaacagtttatgcaaataaataaatttt 55802238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 496 - 568
Target Start/End: Original strand, 948060 - 948133
Alignment:
Q  496 agcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagtttatg 568  Q
    |||||||  |||| |||||||| ||||||||||| |||||||||||||| |||| ||| | |||||||||||||    
T  948060 agcttatgcaaaatagcttatgaaaataaataagcttttatgtattattcataactttgtcaaggtagtttatg 948133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 495 - 568
Target Start/End: Complemental strand, 38345920 - 38345847
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||  |||||||||||| |||||||||||| ||||||||| |||| |||| || | || ||||||||||    
T  38345920 gagcttatgcaaaacagcttatccaaataaataagcttttatgtagtattcataagttgtcaaagtagtttatg 38345847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 510 - 561
Target Start/End: Original strand, 2141643 - 2141695
Alignment:
Q  510 agcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggta 561  Q
    |||||||||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  2141643 agcttatgcaaataaataagcttttatgtgttatttataactttgttaaggta 2141695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 505 - 549
Target Start/End: Original strand, 8130485 - 8130529
Alignment:
Q  505 aaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||||||||||||||||||||| ||||||| |||||| ||||    
T  8130485 aaaacagcttatgcaaataaataagcttttatgcattattcataa 8130529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 485 - 549
Target Start/End: Original strand, 29877616 - 29877680
Alignment:
Q  485 gcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||| | ||||||||  ||||||  ||||||||||||||||| |||||||||||||| ||||    
T  29877616 gcttatttttgagcttatgcaaaacaatttatgcaaataaataagcttttatgtattattcataa 29877680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 512 - 548
Target Start/End: Complemental strand, 54412129 - 54412093
Alignment:
Q  512 cttatgcaaataaataagtttttatgtattatttata 548  Q
    ||||||||||||||||| |||||||||||||||||||    
T  54412129 cttatgcaaataaataaatttttatgtattatttata 54412093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 477 - 533
Target Start/End: Complemental strand, 55802190 - 55802134
Alignment:
Q  477 atacgatagcttattctagagcttatataaaacagcttatgcaaataaataagtttt 533  Q
    ||||| ||| ||||| ||||||||||||||||||| ||||| |||||||||| ||||    
T  55802190 atacgttagtttattttagagcttatataaaacagtttatgaaaataaataaatttt 55802134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 549
Target Start/End: Original strand, 7148774 - 7148813
Alignment:
Q  510 agcttatgcaaataaataagtttttatgtattatttataa 549  Q
    |||||||||||||||||||| |||||||||||||| ||||    
T  7148774 agcttatgcaaataaataagcttttatgtattattcataa 7148813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 486 - 568
Target Start/End: Complemental strand, 23284883 - 23284801
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagtttatg 568  Q
    |||||| |||||||| || ||| || ||||| |||||||||||  ||||||||||||||||||| ||| |||||||| ||||||    
T  23284883 cttattttagagcttctacaaagcatcttatacaaataaataa-attttatgtattatttataagtttgttaaggtattttatg 23284801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 498 - 549
Target Start/End: Complemental strand, 27368248 - 27368197
Alignment:
Q  498 cttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||| ||||||| |||||||||||||||||| |||||| ||||||| ||||    
T  27368248 cttatgtaaaacaacttatgcaaataaataagcttttatatattattcataa 27368197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 506 - 549
Target Start/End: Complemental strand, 52700632 - 52700589
Alignment:
Q  506 aaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||| |||||| |||||||||||| ||||||||||||||||||    
T  52700632 aaacaacttatgtaaataaataagtctttatgtattatttataa 52700589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 495 - 568
Target Start/End: Complemental strand, 213046 - 212973
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagtttatg 568  Q
    ||||||||  |||||| |||||||||||||||||| |||||| ||||||| ||||  || |||||||||||||||    
T  213046 gagcttatgcaaaacaacttatgcaaataaataag-ttttatttattattcataagcttgttaaggtagtttatg 212973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 495 - 568
Target Start/End: Original strand, 3564207 - 3564281
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagtttatg 568  Q
    ||||||||  ||||||||||||| ||||||||||  |||||| ||||||| |||| ||| | |||||||||||||    
T  3564207 gagcttatgcaaaacagcttatgaaaataaataaacttttatatattattcataagtttgtcaaggtagtttatg 3564281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 511 - 549
Target Start/End: Original strand, 28074368 - 28074406
Alignment:
Q  511 gcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  28074368 gcttatgcaaataaataagcttttatgtattattcataa 28074406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 507 - 549
Target Start/End: Complemental strand, 34526412 - 34526370
Alignment:
Q  507 aacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    |||| |||||| ||||||||||||||||||| |||||||||||    
T  34526412 aacaacttatgtaaataaataagtttttatgcattatttataa 34526370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 519 - 549
Target Start/End: Original strand, 35010222 - 35010252
Alignment:
Q  519 aaataaataagtttttatgtattatttataa 549  Q
    |||||||||||||||||||||||||||||||    
T  35010222 aaataaataagtttttatgtattatttataa 35010252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 510 - 544
Target Start/End: Complemental strand, 48591508 - 48591474
Alignment:
Q  510 agcttatgcaaataaataagtttttatgtattatt 544  Q
    ||||||||||||||||||||||||||| |||||||    
T  48591508 agcttatgcaaataaataagtttttatatattatt 48591474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 485 - 538
Target Start/End: Complemental strand, 17222995 - 17222942
Alignment:
Q  485 gcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgt 538  Q
    ||||||| | ||||||||  |||| ||||||| |||||||||||||||||||||    
T  17222995 gcttatttttgagcttatgaaaaatagcttattcaaataaataagtttttatgt 17222942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 549
Target Start/End: Complemental strand, 39932836 - 39932799
Alignment:
Q  512 cttatgcaaataaataagtttttatgtattatttataa 549  Q
    |||||||||||||||||  |||||||||||||||||||    
T  39932836 cttatgcaaataaataaacttttatgtattatttataa 39932799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 485 - 538
Target Start/End: Original strand, 42153082 - 42153135
Alignment:
Q  485 gcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgt 538  Q
    ||||||| | |||||||  ||||| |||||||||||||||||||| ||||||||    
T  42153082 gcttatttttgagcttacgtaaaatagcttatgcaaataaataagcttttatgt 42153135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 43699389 - 43699422
Alignment:
Q  505 aaaacagcttatgcaaataaataagtttttatgt 538  Q
    |||| |||||||||||||||||||||||||||||    
T  43699389 aaaatagcttatgcaaataaataagtttttatgt 43699422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 495 - 539
Target Start/End: Original strand, 9319043 - 9319087
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataagtttttatgta 539  Q
    ||||||||  |||||| ||||| ||||||||||||||||||||||    
T  9319043 gagcttatgcaaaacaacttatacaaataaataagtttttatgta 9319087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 510 - 538
Target Start/End: Original strand, 12495589 - 12495617
Alignment:
Q  510 agcttatgcaaataaataagtttttatgt 538  Q
    |||||||||||||||||||||||||||||    
T  12495589 agcttatgcaaataaataagtttttatgt 12495617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 510 - 538
Target Start/End: Original strand, 24101885 - 24101913
Alignment:
Q  510 agcttatgcaaataaataagtttttatgt 538  Q
    |||||||||||||||||||||||||||||    
T  24101885 agcttatgcaaataaataagtttttatgt 24101913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 513 - 549
Target Start/End: Complemental strand, 26206435 - 26206399
Alignment:
Q  513 ttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||||||||||| || ||||||||||||||||||    
T  26206435 ttatgcaaataaatatgtctttatgtattatttataa 26206399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 486 - 538
Target Start/End: Original strand, 31022380 - 31022432
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgt 538  Q
    |||||| | ||||||||  |||||| || ||||||||||||||||||||||||    
T  31022380 cttatttttgagcttatgcaaaacatctcatgcaaataaataagtttttatgt 31022432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 505 - 537
Target Start/End: Original strand, 41071364 - 41071396
Alignment:
Q  505 aaaacagcttatgcaaataaataagtttttatg 537  Q
    ||||||||||||||||||||||||| |||||||    
T  41071364 aaaacagcttatgcaaataaataagattttatg 41071396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 485 - 549
Target Start/End: Complemental strand, 43699592 - 43699528
Alignment:
Q  485 gcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||| | ||||||||  |||||| ||||| |||||||||||| |||||||| ||||| ||||    
T  43699592 gcttatttttgagcttatgaaaaacaacttatacaaataaataagcttttatgtcttattcataa 43699528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 125; Significance: 4e-64; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 114 - 365
Target Start/End: Complemental strand, 573669 - 573426
Alignment:
Q  114 aactattttatttgtggtgtgtgagactttcttgttttttattccattttaaagaaattaaattaacaatgaaaagtacaaacaagggaagaatgagaat 213  Q
    ||||||||||| |||||| ||||  ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||  |||||    
T  573669 aactattttatctgtggtatgtggaactttcttgttttttattttattttaaagaaattaaattaacaatgaaaagtacaaacaagggaagaagtagaat 573570  T
Q  214 tcgggactatcaatcctatgttgttgctcatggaggtgagtgggatggaggagagagaatgataattgatgatggtgtgtaaaaagatatagtgtagaga 313  Q
    | |||||  |  |      ||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||| |||||||||| |||    
T  573569 ttgggacagttga------gttgttgctcatggaggtgagtgagatggaggggagagaatgataattgatgat-gtgtgtaaaaa-atatagtgtaaaga 573478  T
Q  314 gactatgataaaagtgtgttccataatcgatctaatggttaaaaagtaactt 365  Q
    ||||||||||||| |||||| | || | ||||||||||||||||| ||||||    
T  573477 gactatgataaaaatgtgtttcttagttgatctaatggttaaaaaataactt 573426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 483 - 568
Target Start/End: Complemental strand, 5243514 - 5243429
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  5243514 tagcttattttagagcttatataaaacagcttatgcaaataaataagtttttgtgtattatttataagtttttaaggtagtttatg 5243429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 483 - 568
Target Start/End: Complemental strand, 32497382 - 32497297
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  32497382 tagcttattttggagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataagtttttaaggtagtttatg 32497297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 486 - 568
Target Start/End: Original strand, 15791362 - 15791444
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15791362 cttattttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttataagtttttaaggtagtttatg 15791444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 487 - 568
Target Start/End: Complemental strand, 17628531 - 17628450
Alignment:
Q  487 ttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17628531 ttattttagagcttatataaaacagcttatacaaataaataagtttttatgtattatttataagtttttaaggtagtttatg 17628450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 486 - 568
Target Start/End: Original strand, 17814169 - 17814251
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    |||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||    
T  17814169 cttattttagagcttatataaaacagcttatgcaaataaatacatttttatgtattatttataagtttttaaggtagtttatg 17814251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 483 - 567
Target Start/End: Complemental strand, 22088522 - 22088438
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttat 567  Q
    ||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||    
T  22088522 tagcttattttagagtttatataaaacagcttatgtaaataaataagtttttatgtattatttacaagtttttaaggtagtttat 22088438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 483 - 568
Target Start/End: Complemental strand, 3116172 - 3116087
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| || ||||||||||||||||||||||||||||||||| ||||||||| || ||||||| ||||||||||||||||||    
T  3116172 tagcttattttatagcttatataaaacagcttatgcaaataaataaatttttatgttttgtttataagtttttaaggtagtttatg 3116087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 483 - 568
Target Start/End: Original strand, 5347130 - 5347215
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| |||||||||||||||| | ||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||    
T  5347130 tagcttattttagagcttatataaaataacttatgcaaataaatacatttttatgtattatttataagtttttaaggtagtttatg 5347215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 483 - 568
Target Start/End: Original strand, 19220149 - 19220234
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| || |||||||||||||||| ||| | ||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  19220149 tagcttattttaaagcttatataaaacagtttaagaaaataaataagtttttatgtattatttataggtttttaaggtagtttatg 19220234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 483 - 566
Target Start/End: Original strand, 17348855 - 17348938
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagttta 566  Q
    ||||||||| ||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||| || |||||    
T  17348855 tagcttattttagagtttatataaaacaacttatgcaaataaataagtttttatctattatttataagtttttaaagttgttta 17348938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 487 - 568
Target Start/End: Complemental strand, 13412559 - 13412478
Alignment:
Q  487 ttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||| ||||| |||||||||| | |||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||    
T  13412559 ttattttagagattatataaaataacttatgcaaatacataaatttttatgtattatttataagtttttaaggtagtttatg 13412478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 483 - 568
Target Start/End: Complemental strand, 15235271 - 15235186
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| |||| || |||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||  ||||||||    
T  15235271 tagcttattttagaactaatataaaatagcttatgtaaataaataagtttttatgtattatttataagtttttaagacagtttatg 15235186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 486 - 568
Target Start/End: Original strand, 22103087 - 22103171
Alignment:
Q  486 cttattctagagcttatataaaaca--gcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    |||||| ||||||||||||||||||  ||||||| |||||||||  |||||||||||||||||||| ||||||||||||||||||    
T  22103087 cttattttagagcttatataaaacacagcttatgtaaataaatacatttttatgtattatttataagtttttaaggtagtttatg 22103171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 486 - 568
Target Start/End: Complemental strand, 35276007 - 35275923
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataa--gtttttatgtattatttataattttttaaggtagtttatg 568  Q
    |||||| |||||||||||||||||||||||| |||||||||||   ||||||||||||||||||||  |||||||||||||||||    
T  35276007 cttattttagagcttatataaaacagcttatacaaataaataaatttttttatgtattatttataagattttaaggtagtttatg 35275923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 573830 - 573772
Alignment:
Q  17 gtataaaaaatcatagaaacaaagatgaagaacaaagggtttctagatttccataacct 75  Q
    ||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  573830 gtatagaaaatcggagaaacaaagatgaagaacaaagggtttctagatttccataacct 573772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 487 - 549
Target Start/End: Original strand, 15631883 - 15631945
Alignment:
Q  487 ttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||| ||||||||||| |||||| ||||| ||||||||||||||||||||||||||||||||    
T  15631883 ttattttagagcttatacaaaacaacttatacaaataaataagtttttatgtattatttataa 15631945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 495 - 557
Target Start/End: Original strand, 20169251 - 20169313
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaa 557  Q
    ||||||||  ||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  20169251 gagcttatgaaaaacagcttatgcaaataaataagcttttatgtattatttataagtttttaa 20169313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 573728 - 573672
Alignment:
Q  19 ataaaaaatcatagaaacaaagatgaagaacaaagggtttctagatttccataacct 75  Q
    ||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||    
T  573728 ataaaaaatcatagaaacaaagatgaagaacaaagagttttcagatttccataacct 573672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 486 - 566
Target Start/End: Original strand, 16225487 - 16225567
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagttta 566  Q
    |||||| ||||||||||  ||||||| ||||| |||||||||||||||||||||||| |||||| || |||||||| ||||    
T  16225487 cttattttagagcttatgcaaaacagtttatgtaaataaataagtttttatgtattaattataagttgttaaggtaattta 16225567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 514 - 568
Target Start/End: Original strand, 8410155 - 8410209
Alignment:
Q  514 tatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||    
T  8410155 tatgcaaataaataagtttttatgtattattcataagtttttaaagtagtttatg 8410209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 493 - 549
Target Start/End: Original strand, 19284881 - 19284937
Alignment:
Q  493 tagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||||||||||||||||||||  ||||||||||| | |||||||||||||||||    
T  19284881 tagagcttatataaaacagcttatataaataaataagctattatgtattatttataa 19284937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 486 - 562
Target Start/End: Complemental strand, 52363939 - 52363863
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtag 562  Q
    |||||| ||||| |||||||||| |||||||| |||||| ||||||||| | |||||| ||||| ||||||||||||    
T  52363939 cttattttagagtttatataaaatagcttatgtaaataagtaagtttttctatattatatataaatttttaaggtag 52363863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 494 - 568
Target Start/End: Original strand, 26542959 - 26543034
Alignment:
Q  494 agagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagtttatg 568  Q
    |||||| |||||||||| |||||||||||||||| | ||||||||||||| ||||| ||| |||| ||||||||||    
T  26542959 agagctgatataaaacaacttatgcaaataaatatgcttttatgtattatatataagtttgttaatgtagtttatg 26543034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 512 - 568
Target Start/End: Original strand, 41003391 - 41003449
Alignment:
Q  512 cttatgcaaataaataagtttttatgtattatttataatttttt--aaggtagtttatg 568  Q
    |||||||||||||||||||||||||||||||||||||| ||| |  |||||||||||||    
T  41003391 cttatgcaaataaataagtttttatgtattatttataagtttgtcaaaggtagtttatg 41003449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 495 - 545
Target Start/End: Complemental strand, 26435273 - 26435224
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataagtttttatgtattattt 545  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  26435273 gagcttatacaaaacagcttatgcaaataaataag-ttttatgtattattt 26435224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 495 - 568
Target Start/End: Complemental strand, 9572884 - 9572809
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataag-tttttatgtattatttataa-ttttttaaggtagtttatg 568  Q
    ||||||||  |||||||||| |||||||||||||| ||||||| ||||||| |||| ||| |||||||||||||||    
T  9572884 gagcttatgcaaaacagcttttgcaaataaataagctttttatttattattcataagtttgttaaggtagtttatg 9572809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 506 - 568
Target Start/End: Original strand, 10082248 - 10082311
Alignment:
Q  506 aaacagcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagtttatg 568  Q
    ||||| ||||||||||||||||||||||||||| ||||| |||| ||| | |||||||||||||    
T  10082248 aaacaacttatgcaaataaataagtttttatgtgttattgataagtttgtcaaggtagtttatg 10082311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 510 - 568
Target Start/End: Complemental strand, 36423065 - 36423006
Alignment:
Q  510 agcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagtttatg 568  Q
    |||||||||||||||||||| |||||| ||||||| |||| ||| |||||||||||||||    
T  36423065 agcttatgcaaataaataagcttttatttattattcataagtttgttaaggtagtttatg 36423006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 486 - 568
Target Start/End: Complemental strand, 37148201 - 37148118
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagtttatg 568  Q
    |||||| || |||||||  ||| |||||||||||||||||||||  || ||||||||||||||| | | |||||||||||||||    
T  37148201 cttattttaaagcttatgcaaagcagcttatgcaaataaataagcattaatgtattatttataagtatgttaaggtagtttatg 37148118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 486 - 568
Target Start/End: Complemental strand, 37157026 - 37156943
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagtttatg 568  Q
    |||||| || |||||||  ||| |||||||||||||||||||||  || ||||||||||||||| | | |||||||||||||||    
T  37157026 cttattttaaagcttatgcaaagcagcttatgcaaataaataagcattaatgtattatttataagtatgttaaggtagtttatg 37156943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 505 - 542
Target Start/End: Original strand, 18327521 - 18327558
Alignment:
Q  505 aaaacagcttatgcaaataaataagtttttatgtatta 542  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  18327521 aaaacagcttatgcaaataaataagcttttatgtatta 18327558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 20169410 - 20169377
Alignment:
Q  505 aaaacagcttatgcaaataaataagtttttatgt 538  Q
    ||||||||||||||||||||||||||||||||||    
T  20169410 aaaacagcttatgcaaataaataagtttttatgt 20169377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 485 - 554
Target Start/End: Complemental strand, 47413538 - 47413470
Alignment:
Q  485 gcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttt 554  Q
    ||||||| | ||||||||  |||| |||||||||||||||||||| |||||||| | |||||||||||||    
T  47413538 gcttatttttgagcttatgaaaaatagcttatgcaaataaataagcttttatgt-taatttataattttt 47413470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 505 - 549
Target Start/End: Complemental strand, 35282683 - 35282639
Alignment:
Q  505 aaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    |||||||||||||||||||||||||  ||||| ||||||||||||    
T  35282683 aaaacagcttatgcaaataaataagcgtttatttattatttataa 35282639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 496 - 540
Target Start/End: Original strand, 35590118 - 35590162
Alignment:
Q  496 agcttatataaaacagcttatgcaaataaataagtttttatgtat 540  Q
    ||||||| ||||||| |||||||||||||||||| ||||||||||    
T  35590118 agcttatgtaaaacaacttatgcaaataaataagcttttatgtat 35590162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 505 - 549
Target Start/End: Complemental strand, 35897712 - 35897668
Alignment:
Q  505 aaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    |||||| ||||||||||||||||||||||||| ||||||| ||||    
T  35897712 aaaacaacttatgcaaataaataagtttttatttattattcataa 35897668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 568
Target Start/End: Original strand, 51162254 - 51162330
Alignment:
Q  493 tagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagtttatg 568  Q
    ||||||||||  |||  ||||||||||||||||||||  || |||||||||||| || ||| |||||||||||||||    
T  51162254 tagagcttatgcaaagtagcttatgcaaataaataagcattaatgtattatttacaagtttgttaaggtagtttatg 51162330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 486 - 568
Target Start/End: Complemental strand, 1265801 - 1265718
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataatttt-ttaaggtagtttatg 568  Q
    |||||| | ||||||||  |||||| ||||| |||| | ||||| |||||||||||||| |||||||| | |||||||||||||    
T  1265801 cttatttttgagcttatgcaaaacaacttatacaaacagataagattttatgtattattcataattttgtcaaggtagtttatg 1265718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 517 - 568
Target Start/End: Complemental strand, 16889042 - 16888991
Alignment:
Q  517 gcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||||||| |||||||||||||| ||||  || ||||||||||||||    
T  16889042 gcaaataaataagcttttatgtattattcataagcttgtaaggtagtttatg 16888991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 495 - 538
Target Start/End: Original strand, 22593337 - 22593380
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataagtttttatgt 538  Q
    ||||||||  ||||||||||||||||||||||||| ||||||||    
T  22593337 gagcttatgcaaaacagcttatgcaaataaataagcttttatgt 22593380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 549
Target Start/End: Complemental strand, 22593491 - 22593452
Alignment:
Q  510 agcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||||||||||||||| ||||||||||||||| ||||    
T  22593491 agcttatgcaaataaataaatttttatgtattattcataa 22593452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 483 - 549
Target Start/End: Original strand, 42363577 - 42363641
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||||| ||||||||||  || ||||||||| |||||||||  || ||||||||||||||||||    
T  42363577 tagcttattttagagcttatgcaagacagcttatacaaataaat--gtctttatgtattatttataa 42363641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 549
Target Start/End: Original strand, 42831376 - 42831415
Alignment:
Q  510 agcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  42831376 agcttatgcaaataagtaagtttttacgtattatttataa 42831415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 549
Target Start/End: Complemental strand, 51409791 - 51409752
Alignment:
Q  510 agcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||||||||||||||||||| ||||||||||| ||||    
T  51409791 agcttatgcaaataaataagtttgtatgtattattcataa 51409752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 549
Target Start/End: Original strand, 12256582 - 12256648
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||||| ||||||||||  |||||| |||||| |||||| || | |||||| ||||||||||||    
T  12256582 tagcttattttagagcttatgcaaaacaacttatgtaaataattatgcttttatatattatttataa 12256648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 543
Target Start/End: Complemental strand, 39658412 - 39658382
Alignment:
Q  513 ttatgcaaataaataagtttttatgtattat 543  Q
    |||||||||||||||||||||||||||||||    
T  39658412 ttatgcaaataaataagtttttatgtattat 39658382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 487 - 568
Target Start/End: Original strand, 42591361 - 42591443
Alignment:
Q  487 ttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagtttatg 568  Q
    ||||| || |||||||| |||||||||| | ||| |||||||| |||||  |||||||||||| ||| |||||||| ||||||    
T  42591361 ttattttaaagcttatacaaaacagcttgtacaagtaaataagcttttacatattatttataagtttgttaaggtattttatg 42591443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 495 - 549
Target Start/End: Complemental strand, 46501100 - 46501046
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||||||||||||  ||||| |||||||| || |||| ||||||||||||||    
T  46501100 gagcttatataaaacaatttatgtaaataaatgagcttttttgtattatttataa 46501046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 483 - 549
Target Start/End: Original strand, 49971226 - 49971292
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||||| ||||||||||  |||||| ||||||||||||||||    ||||| ||||||||||||    
T  49971226 tagcttattttagagcttatgcaaaacaacttatgcaaataaatattcctttatttattatttataa 49971292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 549
Target Start/End: Original strand, 391165 - 391210
Alignment:
Q  505 aaaacagcttatgcaaataaataag-tttttatgtattatttataa 549  Q
    ||||||||||||||||||||||||| ||||||| ||||||| ||||    
T  391165 aaaacagcttatgcaaataaataagctttttatatattattcataa 391210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 568
Target Start/End: Original strand, 28690001 - 28690065
Alignment:
Q  507 aacagcttatgcaaataa--ataagtttttatgtattatttataa-ttttttaaggtagtttatg 568  Q
    ||||||||||||||||||  ||||| |||||||||||||| |||| ||| | |||||||||||||    
T  28690001 aacagcttatgcaaataaatataaggttttatgtattattcataagtttgtcaaggtagtttatg 28690065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 485 - 538
Target Start/End: Original strand, 41196630 - 41196683
Alignment:
Q  485 gcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgt 538  Q
    ||||||| | |||||||| ||||| ||||||||||||||||||||  |||||||    
T  41196630 gcttatttttgagcttatgtaaaatagcttatgcaaataaataagcctttatgt 41196683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 505 - 549
Target Start/End: Original strand, 4068112 - 4068156
Alignment:
Q  505 aaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    |||| ||||| |||||||||||||| |||||||||||||| ||||    
T  4068112 aaaatagcttgtgcaaataaataagcttttatgtattattcataa 4068156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 549
Target Start/End: Original strand, 16708784 - 16708840
Alignment:
Q  493 tagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||||||||||| | ||||||||||||||| || | || ||||| |||||||||    
T  16708784 tagagcttatataaaccggcttatgcaaataaagaaatattaatgtactatttataa 16708840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 486 - 568
Target Start/End: Complemental strand, 26946213 - 26946129
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataag-tttttatgtattatttataa-ttttttaaggtagtttatg 568  Q
    |||||| | ||||||||  ||||| ||||||| ||||||||||| ||||||||| ||||| ||||  || |||||||||||||||    
T  26946213 cttatttttgagcttatgcaaaacggcttatgtaaataaataagctttttatgtgttattcataagcttgttaaggtagtttatg 26946129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 485 - 549
Target Start/End: Original strand, 29333394 - 29333458
Alignment:
Q  485 gcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||| |||| |||||  ||| |||| ||| ||||||||||||| || |||||||||||||||    
T  29333394 gcttattttagaacttatgcaaagcagcatatacaaataaataagtattaatgtattatttataa 29333458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 294 - 334
Target Start/End: Complemental strand, 46357992 - 46357952
Alignment:
Q  294 aaaaagatatagtgtagagagactatgataaaagtgtgttc 334  Q
    ||||| |||| || |||||||||||||||||||||||||||    
T  46357992 aaaaaaatatggtatagagagactatgataaaagtgtgttc 46357952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 121; Significance: 1e-61; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 139 - 358
Target Start/End: Complemental strand, 49244828 - 49244617
Alignment:
Q  139 actttcttgttttttattccattttaaagaaattaaattaacaatgaaaagtacaaacaagggaagaatgagaattcgggactatcaatcctatgttgtt 238  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||  |  |      ||||||    
T  49244828 actttcttgttttttattttattttaaagaaattaaattaacaatgaaaagtacaaacaagggaagaaatagaatttgggaccgtgga------gttgtt 49244735  T
Q  239 gctcatggaggtgagtgggatggaggagagagaatgataattgatgatggtgtgtaaaaagatatagtgtagagagactatgataaaagtgtgttccata 338  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||| ||    
T  49244734 gctcatggaggtgagtgggatggaggggagggaatgataattgatgat-gtgtgtaaaaa-atatagtgtagagagactatgataaaagcgtgttcctta 49244637  T
Q  339 atcgatctaatggttaaaaa 358  Q
     | |||||||||||||||||    
T  49244636 gttgatctaatggttaaaaa 49244617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 483 - 568
Target Start/End: Original strand, 3645278 - 3645363
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3645278 tagcttattttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttataattttttaaggtagtttatg 3645363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 486 - 568
Target Start/End: Original strand, 29614172 - 29614254
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29614172 cttattttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttataattttttaaggtagtttatg 29614254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 483 - 568
Target Start/End: Complemental strand, 4257412 - 4257327
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  4257412 tagcttattttagagcttatataaaacaacttatgcaaataaataagtttttatgtattatttataagtttttaaggtagtttatg 4257327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 483 - 565
Target Start/End: Original strand, 20894478 - 20894560
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagttt 565  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  20894478 tagcttattttagagcttatataaaacagcttatgtaaataaataagtttttatgtattatttataattttttaatgtagttt 20894560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 483 - 554
Target Start/End: Complemental strand, 28623345 - 28623274
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttt 554  Q
    ||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  28623345 tagcttattgtagagcttatagaaaacaacttatgcaaataaataagtttttatgtattatttataaatttt 28623274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 483 - 566
Target Start/End: Original strand, 36266219 - 36266303
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagttta 566  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||| ||| |||||||| ||||    
T  36266219 tagcttattttagagcttatataaaacagtttatgcaaataaataaacttttatgtattatttataagtttgttaaggtatttta 36266303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 486 - 568
Target Start/End: Complemental strand, 29830878 - 29830795
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttata-attttttaaggtagtttatg 568  Q
    |||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||  ||| |||||||||||||||    
T  29830878 cttattttagagcttatacaaaacagtttatgcaaataaataagtttttatgtattatctatatgtttgttaaggtagtttatg 29830795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 486 - 549
Target Start/End: Original strand, 30499944 - 30500007
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    |||||| ||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||    
T  30499944 cttattttagagcttatacaaaacagtttatgcaaataaataaatttttatgtattatttataa 30500007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 484 - 568
Target Start/End: Complemental strand, 37456543 - 37456459
Alignment:
Q  484 agcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    |||||||| ||||| ||||| ||||||| | ||  |||||||||| |||||||||||||||||||| |||||||| |||||||||    
T  37456543 agcttattttagagattataaaaaacagttcatataaataaataaatttttatgtattatttataagtttttaagatagtttatg 37456459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 49244884 - 49244840
Alignment:
Q  31 agaaacaaagatgaagaacaaagggtttctagatttccataacct 75  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  49244884 agaaacaaagatgaagaacaaagggtttccagatttccataacct 49244840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 486 - 549
Target Start/End: Original strand, 17383483 - 17383546
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    |||||| ||||| |||||||||| || ||||||||||||||||| ||||||||| |||||||||    
T  17383483 cttattttagagtttatataaaatagattatgcaaataaataagattttatgtaatatttataa 17383546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 483 - 549
Target Start/End: Original strand, 10448749 - 10448815
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||||| ||||||||||  |||||| |||||||||||||||| |  ||||||||||||||||||    
T  10448749 tagcttattttagagcttatgcaaaacaacttatgcaaataaatatgcctttatgtattatttataa 10448815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 485 - 550
Target Start/End: Complemental strand, 2086800 - 2086735
Alignment:
Q  485 gcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataat 550  Q
    ||||||| ||||||||||   |||||||||||| ||||||||||  ||||||||||||||||||||    
T  2086800 gcttattttagagcttatgctaaacagcttatgtaaataaataaacttttatgtattatttataat 2086735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 513 - 568
Target Start/End: Original strand, 38524093 - 38524149
Alignment:
Q  513 ttatgcaaataaataagtttttatgtattatttat-aattttttaaggtagtttatg 568  Q
    |||||||||||||||||| || ||||||||||||| ||||| |||||||||||||||    
T  38524093 ttatgcaaataaataagtattaatgtattatttataaatttgttaaggtagtttatg 38524149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 485 - 544
Target Start/End: Original strand, 23555461 - 23555520
Alignment:
Q  485 gcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatt 544  Q
    ||||||| | |||||||||  |||||| ||||||||||||||||| ||||||||||||||    
T  23555461 gcttatttttgagcttatacgaaacagtttatgcaaataaataagcttttatgtattatt 23555520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 486 - 553
Target Start/End: Original strand, 32983212 - 32983278
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataatttt 553  Q
    |||||| | ||||||||| |||| ||||||||||||||||||| ||||||||| | ||||||||||||    
T  32983212 cttatttttgagcttataaaaaatagcttatgcaaataaataaatttttatgt-taatttataatttt 32983278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 502 - 561
Target Start/End: Complemental strand, 46091186 - 46091127
Alignment:
Q  502 tataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggta 561  Q
    |||||||||| ||||| |||||||||||||||||| |||| |||||||  ||||||||||    
T  46091186 tataaaacagtttatgtaaataaataagtttttatatattgtttataagcttttaaggta 46091127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 495 - 568
Target Start/End: Complemental strand, 3876362 - 3876288
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataat-tttttaaggtagtttatg 568  Q
    ||||||||| ||||||||||||| |||||||| || |||||| ||||||| ||||| |  |||||||||||||||    
T  3876362 gagcttatacaaaacagcttatgtaaataaattagcttttatttattattcataatctagttaaggtagtttatg 3876288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 499 - 549
Target Start/End: Complemental strand, 24842202 - 24842152
Alignment:
Q  499 ttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||| |||||| ||||||||||||||||| ||||||||||||||| ||||    
T  24842202 ttataaaaaacaacttatgcaaataaataaatttttatgtattattcataa 24842152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 495 - 549
Target Start/End: Complemental strand, 40581176 - 40581122
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||||  |||||| |||||||||||||||||| |||||||||||||| ||||    
T  40581176 gagcttatgcaaaacaacttatgcaaataaataagcttttatgtattattaataa 40581122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 485 - 547
Target Start/End: Complemental strand, 53261856 - 53261794
Alignment:
Q  485 gcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttat 547  Q
    ||||||| | ||||||||  | ||||||||||||||||||||| ||||||| |||||||||||    
T  53261856 gcttatttttgagcttatggacaacagcttatgcaaataaatatgtttttacgtattatttat 53261794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 504 - 549
Target Start/End: Complemental strand, 30917584 - 30917539
Alignment:
Q  504 taaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    |||||||  |||||||||||||||| ||||||||||||||||||||    
T  30917584 taaaacaatttatgcaaataaataaatttttatgtattatttataa 30917539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 505 - 568
Target Start/End: Original strand, 37778134 - 37778194
Alignment:
Q  505 aaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    |||||| ||||||||||||| |   ||||||||||||||||| || ||||||||||||||||||    
T  37778134 aaaacaacttatgcaaataagt---tttttatgtattatttagaaatttttaaggtagtttatg 37778194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 485 - 549
Target Start/End: Original strand, 4974288 - 4974352
Alignment:
Q  485 gcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||| ||||||||||  ||| |||||||||||||||||||||   | |||||||||||||||    
T  4974288 gcttattttagagcttatgcaaagcagcttatgcaaataaataagcactaatgtattatttataa 4974352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 485 - 549
Target Start/End: Complemental strand, 24841496 - 24841432
Alignment:
Q  485 gcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||| ||||||||||  ||| || |||| |||||||||||||||| ||| ||||||||||||    
T  24841496 gcttattttagagcttatgcaaagcaacttaagcaaataaataagtttgtatatattatttataa 24841432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 486 - 568
Target Start/End: Complemental strand, 1516205 - 1516123
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagtttatg 568  Q
    |||||| ||||||||||| |||| | ||||| |||||||||||   |||||||||||||||||| ||| |||||||| ||||||    
T  1516205 cttattttagagcttatacaaaataacttattcaaataaataa-catttatgtattatttataagtttgttaaggtattttatg 1516123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 515 - 549
Target Start/End: Complemental strand, 42956258 - 42956224
Alignment:
Q  515 atgcaaataaataagtttttatgtattatttataa 549  Q
    |||||||||||||||||||||||||||||| ||||    
T  42956258 atgcaaataaataagtttttatgtattattcataa 42956224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 536
Target Start/End: Original strand, 53787681 - 53787723
Alignment:
Q  494 agagcttatataaaacagcttatgcaaataaataagtttttat 536  Q
    |||||||||  |||| |||||||||||||||||||||||||||    
T  53787681 agagcttatggaaaagagcttatgcaaataaataagtttttat 53787723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 536
Target Start/End: Original strand, 3876193 - 3876234
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataagtttttat 536  Q
    ||||||||  |||| |||||||||||||||||||||||||||    
T  3876193 gagcttatgaaaaatagcttatgcaaataaataagtttttat 3876234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 485 - 534
Target Start/End: Original strand, 20685748 - 20685797
Alignment:
Q  485 gcttattctagagcttatataaaacagcttatgcaaataaataagttttt 534  Q
    ||||||| | ||||||||  ||||||||||| ||||||||||||||||||    
T  20685748 gcttatttttgagcttatgcaaaacagcttacgcaaataaataagttttt 20685797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 549
Target Start/End: Complemental strand, 22809283 - 22809238
Alignment:
Q  505 aaaacagcttatgcaaataaataag-tttttatgtattatttataa 549  Q
    ||||||||||||||||||||||||| ||||||| ||||||| ||||    
T  22809283 aaaacagcttatgcaaataaataagctttttatatattattcataa 22809238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 544
Target Start/End: Original strand, 25341269 - 25341318
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataagtttttatgtattatt 544  Q
    |||||||| ||||||||| |||||||||||||||| ||| || |||||||    
T  25341269 gagcttatgtaaaacagcatatgcaaataaataagctttcatttattatt 25341318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 544
Target Start/End: Complemental strand, 33946641 - 33946592
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataagtttttatgtattatt 544  Q
    ||||||||  |||| |||||||||||||||||||| |||||| |||||||    
T  33946641 gagcttatgcaaaatagcttatgcaaataaataagcttttatttattatt 33946592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 496 - 549
Target Start/End: Complemental strand, 53218138 - 53218085
Alignment:
Q  496 agcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    |||||||  |||||| ||||||| |||||||||| |||||||||||||| ||||    
T  53218138 agcttatgcaaaacaacttatgcgaataaataagattttatgtattattcataa 53218085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 544
Target Start/End: Original strand, 585008 - 585056
Alignment:
Q  496 agcttatataaaacagcttatgcaaataaataagtttttatgtattatt 544  Q
    ||||||| |||||||  ||||||||||||||||| ||||||| ||||||    
T  585008 agcttatgtaaaacacattatgcaaataaataagcttttatgcattatt 585056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 513 - 549
Target Start/End: Complemental strand, 5129896 - 5129860
Alignment:
Q  513 ttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  5129896 ttatgcaaataaataagttttaatgtattattcataa 5129860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 505 - 568
Target Start/End: Original strand, 11528888 - 11528952
Alignment:
Q  505 aaaacagcttatgcaaataaataagtttttatgtattatttat-aattttttaaggtagtttatg 568  Q
    |||||| |||||| || |||||||| |||||||||||||| || ||||| |||| ||||||||||    
T  11528888 aaaacaacttatgtaagtaaataagcttttatgtattattcataaatttgttaatgtagtttatg 11528952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 513 - 568
Target Start/End: Original strand, 21296771 - 21296827
Alignment:
Q  513 ttatgcaaataaataagtttttatgtattatttata-attttttaaggtagtttatg 568  Q
    |||||||||||||||||||||||| ||||||| |||  ||| | |||||||||||||    
T  21296771 ttatgcaaataaataagtttttatctattattcatacgtttatcaaggtagtttatg 21296827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 513 - 557
Target Start/End: Complemental strand, 24521286 - 24521242
Alignment:
Q  513 ttatgcaaataaataagtttttatgtattatttataattttttaa 557  Q
    ||||||||||||||||| |||||||||||||| | || |||||||    
T  24521286 ttatgcaaataaataagattttatgtattattcacaagtttttaa 24521242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 513 - 549
Target Start/End: Complemental strand, 30199037 - 30199001
Alignment:
Q  513 ttatgcaaataaataagtttttatgtattatttataa 549  Q
    |||||||||||||||||||||||||| ||||| ||||    
T  30199037 ttatgcaaataaataagtttttatgtgttattcataa 30199001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 513 - 568
Target Start/End: Complemental strand, 41601412 - 41601356
Alignment:
Q  513 ttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagtttatg 568  Q
    |||||||||||||| |||||||||||||||||  ||| ||| ||||| |||||||||    
T  41601412 ttatgcaaataaatcagtttttatgtattattcttaagtttgttaagttagtttatg 41601356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 3e-34; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 486 - 568
Target Start/End: Original strand, 42102085 - 42102167
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  42102085 cttattttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataagtttttaaggtagtttatg 42102167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 483 - 568
Target Start/End: Original strand, 12607055 - 12607140
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  12607055 tagcttattttagagcttatataaaacagcatatgcaaataaataagtttttatgtattatttataagtttttaaggtagtttatg 12607140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 483 - 568
Target Start/End: Complemental strand, 37411023 - 37410938
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37411023 tagcttattttagagcttatataaaacagtttatgtaaataaataagtttttatgtattatttataattttttaaggtagtttatg 37410938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 483 - 568
Target Start/End: Complemental strand, 42363427 - 42363342
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  42363427 tagcttattttagagcttatataaaatagcttatgcaaataaataagtttttatgtattatttataagtttttaaggtagtttatg 42363342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 483 - 568
Target Start/End: Complemental strand, 38338961 - 38338876
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||    
T  38338961 tagcttattttagagcttatataaaacagcttatgcaaataaataagtttttaaatattatttataagtttttaaggtagtttatg 38338876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 483 - 566
Target Start/End: Original strand, 38195462 - 38195545
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagttta 566  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  38195462 tagcttattttagagcttatataaaacaacttatgcaaataaataagtttttatatattatttataagtttttaaggtagttta 38195545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 499 - 567
Target Start/End: Complemental strand, 29243158 - 29243090
Alignment:
Q  499 ttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttat 567  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  29243158 ttatataaaacagcttatgcaaataaataagcttttatgtattatttataagtttttaaggtagtttat 29243090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 496 - 564
Target Start/End: Original strand, 11988185 - 11988253
Alignment:
Q  496 agcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtt 564  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11988185 agcttatataaaacaatttatgcaaataaataagtttttatgtattatttataagtttttaaggtagtt 11988253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 486 - 568
Target Start/End: Complemental strand, 218360 - 218278
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    |||||| || |||||||||||||| | ||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  218360 cttattttatagcttatataaaacggtttatgtaaataaataaatttttatgtattatttataagtttttaaggtagtttatg 218278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 486 - 568
Target Start/End: Complemental strand, 694920 - 694838
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    |||||| || |||||||||||||| | ||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  694920 cttattttatagcttatataaaacggtttatgtaaataaataaatttttatgtattatttataagtttttaaggtagtttatg 694838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 486 - 568
Target Start/End: Complemental strand, 699129 - 699047
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    |||||| || |||||||||||||| | ||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  699129 cttattttatagcttatataaaacggtttatgtaaataaataaatttttatgtattatttataagtttttaaggtagtttatg 699047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 486 - 568
Target Start/End: Complemental strand, 731983 - 731901
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    |||||| || |||||||||||||| | ||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  731983 cttattttatagcttatataaaacggtttatgtaaataaataaatttttatgtattatttataagtttttaaggtagtttatg 731901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 486 - 568
Target Start/End: Complemental strand, 855879 - 855797
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    |||||| || |||||||||||||| | ||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  855879 cttattttatagcttatataaaacggtttatgtaaataaataaatttttatgtattatttataagtttttaaggtagtttatg 855797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 483 - 568
Target Start/End: Original strand, 3129981 - 3130069
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatg---tattatttataattttttaaggtagtttatg 568  Q
    ||||||||| |||||||||||||||| |||||||||||||| || ||||||||||   |||||||||||| ||||||||||||||||||    
T  3129981 tagcttattttagagcttatataaaatagcttatgcaaatacatcagtttttatgtattattatttataagtttttaaggtagtttatg 3130069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 483 - 554
Target Start/End: Original strand, 3664111 - 3664182
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttt 554  Q
    ||||||||| |||||||||||||||| || |||||||||||||||| |||||||||||||||||||| ||||    
T  3664111 tagcttattttagagcttatataaaatagtttatgcaaataaataaatttttatgtattatttataagtttt 3664182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 498 - 568
Target Start/End: Original strand, 42666988 - 42667058
Alignment:
Q  498 cttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||||||| |||||||||||||| ||||| ||||||||||||||||| |||||||  |||||||||    
T  42666988 cttatataaaacaacttatgcaaataaacaagttgttatgtattatttataagtttttaaaatagtttatg 42667058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 483 - 568
Target Start/End: Original strand, 32751113 - 32751198
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| |||| ||||||| |||||  |||||||||||||||| |||||||||| |||| |||| ||||||| ||||||||||    
T  32751113 tagcttattttagaacttatattaaacaatttatgcaaataaataaatttttatgtactattaataagtttttaaagtagtttatg 32751198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 487 - 566
Target Start/End: Original strand, 19925536 - 19925616
Alignment:
Q  487 ttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagttta 566  Q
    ||||| ||| ||||||| ||||||||||||||||||||||||| |||||  |||||||||||| ||| |||||||| ||||    
T  19925536 ttattttagggcttatacaaaacagcttatgcaaataaataagcttttaattattatttataagtttgttaaggtatttta 19925616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 483 - 568
Target Start/End: Original strand, 35055393 - 35055480
Alignment:
Q  483 tagcttattctagagcttatataaaac--agcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| ||||||||||| ||||   ||||||| ||| ||||| |||||||||||||||||| ||  ||||||||||||||||||    
T  35055393 tagcttattttagagcttataaaaaaataagcttatacaagtaaatgagtttttatgtattatttgtatgtttttaaggtagtttatg 35055480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 486 - 567
Target Start/End: Original strand, 43577199 - 43577281
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttat-aattttttaaggtagtttat 567  Q
    |||||| ||||||||||  |||| || |||||||||||||||| | || ||||||||||||| ||||| ||||||||||||||    
T  43577199 cttattttagagcttatgcaaaatagtttatgcaaataaataaatattaatgtattatttataaatttgttaaggtagtttat 43577281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 483 - 540
Target Start/End: Original strand, 29713165 - 29713222
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtat 540  Q
    ||||||||| || |||||||||||||| | |||||||||||||||| |||||||||||    
T  29713165 tagcttattttaaagcttatataaaacggtttatgcaaataaataaatttttatgtat 29713222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 546
Target Start/End: Complemental strand, 2019757 - 2019697
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattattta 546  Q
    |||||| ||||||||||  |||||| |||||||||||||||||||  ||||||||||||||    
T  2019757 cttattttagagcttatgcaaaacatcttatgcaaataaataagtcattatgtattattta 2019697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 485 - 549
Target Start/End: Original strand, 14942401 - 14942465
Alignment:
Q  485 gcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||| |||||||||| ||||||| |||||| | ||||||||| |||| ||||||||||||||    
T  14942401 gcttattttagagcttatgtaaaacaacttatgtatataaataagcttttgtgtattatttataa 14942465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 496 - 568
Target Start/End: Original strand, 19327855 - 19327927
Alignment:
Q  496 agcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    |||||||  |||||| |||||||||||||||||  |||||||||||||| |||| ||| ||| ||||||||||    
T  19327855 agcttatgcaaaacaacttatgcaaataaataaacttttatgtattattcataagtttgtaatgtagtttatg 19327927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 510 - 568
Target Start/End: Original strand, 2669650 - 2669709
Alignment:
Q  510 agcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagtttatg 568  Q
    |||||||||||||||||||| | | ||||||||||||||| ||| |||||||||||||||    
T  2669650 agcttatgcaaataaataagctctaatgtattatttataagtttgttaaggtagtttatg 2669709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 486 - 568
Target Start/End: Original strand, 32131418 - 32131501
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagtttatg 568  Q
    |||||| | ||||||||  ||||||||||||||||||||||||| ||||||| ||||||  ||| ||| | |||||||||||||    
T  32131418 cttatttttgagcttatgcaaaacagcttatgcaaataaataagcttttatgcattattcctaagtttgtcaaggtagtttatg 32131501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 510 - 568
Target Start/End: Original strand, 35453412 - 35453471
Alignment:
Q  510 agcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagtttatg 568  Q
    |||||||||||||||||||| |||||||||||||| |||| ||| | |||||||||||||    
T  35453412 agcttatgcaaataaataagcttttatgtattattcataagtttatcaaggtagtttatg 35453471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 495 - 549
Target Start/End: Complemental strand, 16706199 - 16706145
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||||  ||||| ||||||||||||||||| |||||||||||||||| ||||    
T  16706199 gagcttatgcaaaacggcttatgcaaataaatatgtttttatgtattattcataa 16706145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 485 - 568
Target Start/End: Original strand, 2563335 - 2563419
Alignment:
Q  485 gcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagtttatg 568  Q
    ||||||| ||||| |||| ||||| |  |||||||||||||||| | || ||||||||||||||| ||| |||| ||||||||||    
T  2563335 gcttattttagaggttatgtaaaataatttatgcaaataaataaatattaatgtattatttataagtttgttaaagtagtttatg 2563419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 485 - 568
Target Start/End: Original strand, 30973966 - 30974050
Alignment:
Q  485 gcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttat-aattttttaaggtagtttatg 568  Q
    ||||||| ||||||||||  ||| ||||||||| ||||||| |||  || ||||||||||||| ||||| |||||| ||||||||    
T  30973966 gcttattttagagcttatgcaaagcagcttatgtaaataaagaagcattaatgtattatttataaatttgttaaggcagtttatg 30974050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 485 - 568
Target Start/End: Complemental strand, 36907757 - 36907669
Alignment:
Q  485 gcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttat-----aattttttaaggtagtttatg 568  Q
    ||||||| ||||||||||  ||| ||| ||||||||||||| |||| || |||||||||||||     ||||| |||||||||||||||    
T  36907757 gcttattttagagcttatgcaaagcagtttatgcaaataaagaagtattaatgtattatttatttataaatttgttaaggtagtttatg 36907669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 549
Target Start/End: Complemental strand, 9131212 - 9131173
Alignment:
Q  510 agcttatgcaaataaataagtttttatgtattatttataa 549  Q
    |||||||||||||| ||||| |||||||||||||||||||    
T  9131212 agcttatgcaaatatataagcttttatgtattatttataa 9131173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 486 - 549
Target Start/End: Complemental strand, 19925496 - 19925433
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    |||||| ||||||||||  | ||||| |||||||||||||||||  || |||||||||||||||    
T  19925496 cttattttagagcttatgcataacagtttatgcaaataaataagcattaatgtattatttataa 19925433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 568
Target Start/End: Original strand, 28280711 - 28280770
Alignment:
Q  510 agcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagtttatg 568  Q
    |||||||||||||||||| |  |||||||||||||||||| ||| |||| ||||||||||    
T  28280711 agcttatgcaaataaatatgcatttatgtattatttataagtttgttaatgtagtttatg 28280770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 549
Target Start/End: Original strand, 28879060 - 28879099
Alignment:
Q  510 agcttatgcaaataaataagtttttatgtattatttataa 549  Q
    |||||||||||||||||||| |||||||||||||| ||||    
T  28879060 agcttatgcaaataaataagcttttatgtattattcataa 28879099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 549
Target Start/End: Complemental strand, 32213106 - 32213067
Alignment:
Q  510 agcttatgcaaataaataagtttttatgtattatttataa 549  Q
    |||||||||||||||||||| |||||||||||||| ||||    
T  32213106 agcttatgcaaataaataagcttttatgtattattcataa 32213067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 519 - 549
Target Start/End: Complemental strand, 402163 - 402133
Alignment:
Q  519 aaataaataagtttttatgtattatttataa 549  Q
    |||||||||||||||||||||||||||||||    
T  402163 aaataaataagtttttatgtattatttataa 402133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 547
Target Start/End: Original strand, 35123108 - 35123142
Alignment:
Q  513 ttatgcaaataaataagtttttatgtattatttat 547  Q
    |||||||||||||||||||||||||| ||||||||    
T  35123108 ttatgcaaataaataagtttttatgttttatttat 35123142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 510 - 543
Target Start/End: Complemental strand, 2289970 - 2289937
Alignment:
Q  510 agcttatgcaaataaataagtttttatgtattat 543  Q
    ||||||||||||||||||||||||||| ||||||    
T  2289970 agcttatgcaaataaataagtttttatttattat 2289937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 510 - 539
Target Start/End: Original strand, 10213727 - 10213756
Alignment:
Q  510 agcttatgcaaataaataagtttttatgta 539  Q
    ||||||||||||||||||||||||||||||    
T  10213727 agcttatgcaaataaataagtttttatgta 10213756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 496 - 549
Target Start/End: Original strand, 13131418 - 13131471
Alignment:
Q  496 agcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    |||||||  ||||||  ||||||||||||||||| |||||||||||||| ||||    
T  13131418 agcttatgcaaaacaaattatgcaaataaataagcttttatgtattattcataa 13131471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 536
Target Start/End: Original strand, 24866881 - 24866922
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataagtttttat 536  Q
    ||||||||  |||| |||||||||||||||||||||||||||    
T  24866881 gagcttatgaaaaagagcttatgcaaataaataagtttttat 24866922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 536
Target Start/End: Complemental strand, 28280865 - 28280824
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataagtttttat 536  Q
    ||||||||  |||| |||||||||||||||||||||||||||    
T  28280865 gagcttatgaaaaagagcttatgcaaataaataagtttttat 28280824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 496 - 549
Target Start/End: Original strand, 35285916 - 35285969
Alignment:
Q  496 agcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    |||||| | ||||||||||||||||||||||||| |||| ||| ||||| ||||    
T  35285916 agcttacacaaaacagcttatgcaaataaataagcttttgtgtgttattcataa 35285969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 513 - 549
Target Start/End: Original strand, 1089018 - 1089054
Alignment:
Q  513 ttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  1089018 ttatgcaaataaataagttttaatgtattattcataa 1089054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 513 - 549
Target Start/End: Original strand, 13265489 - 13265525
Alignment:
Q  513 ttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  13265489 ttatgcaaataaataagcttttatgtattattcataa 13265525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 1e-33; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 483 - 568
Target Start/End: Complemental strand, 24371517 - 24371432
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  24371517 tagcttattttagagcttatataaaacagcttatgcaaataaataagttttaatgtattatttataagtttttaaggtagtttatg 24371432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 483 - 568
Target Start/End: Original strand, 28004559 - 28004644
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  28004559 tagcttattttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataatttttttaagtagtttatg 28004644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 483 - 568
Target Start/End: Original strand, 25536253 - 25536338
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| ||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25536253 tagcttattttagagtttatataaaacagcttacgtaaataaataagtttttatgtattatttataaatttttaaggtagtttatg 25536338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 483 - 568
Target Start/End: Original strand, 35246647 - 35246732
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  35246647 tagcttattttagagcctatataaaacaacttatgcaaataaataagtttttatgtattatttaaaagtttttaaggtagtttatg 35246732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 483 - 568
Target Start/End: Complemental strand, 14676069 - 14675985
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| |||||||||||||||||| |||||||||||||||| || |||||||||||||||||| ||||||||||||||||||    
T  14676069 tagcttatt-tagagcttatataaaacaacttatgcaaataaataggtgtttatgtattatttataagtttttaaggtagtttatg 14675985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 483 - 568
Target Start/End: Original strand, 16958791 - 16958876
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| | |||||||||||||||| ||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||    
T  16958791 tagcttatttttgagcttatataaaacaacttatgcaactaaataaatttttatgtattatttataagtttttaaggtagtttatg 16958876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 483 - 568
Target Start/End: Complemental strand, 16933040 - 16932955
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| | |||||||||||||| | ||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||    
T  16933040 tagcttatttttgagcttatataaaataacttatgcaactaaataaatttttatgtattatttataagtttttaaggtagtttatg 16932955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 483 - 568
Target Start/End: Complemental strand, 16938423 - 16938338
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| | |||||||||||||| | ||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||    
T  16938423 tagcttatttttgagcttatataaaataacttatgcaactaaataaatttttatgtattatttataagtttttaaggtagtttatg 16938338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 483 - 568
Target Start/End: Complemental strand, 23137273 - 23137188
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| |||||||||||||||| | ||||| |||| |||||| |||||||||||||||||||| ||||||||||||||||||    
T  23137273 tagcttattttagagcttatataaaataacttatacaaacaaataaatttttatgtattatttataagtttttaaggtagtttatg 23137188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 493 - 568
Target Start/End: Original strand, 991485 - 991560
Alignment:
Q  493 tagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||||| |||||| |||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  991485 tagagcttataaaaaacaccttatgcacataaataagtttttatgcattatttataagtttttaaggtagtttatg 991560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 483 - 568
Target Start/End: Original strand, 48949696 - 48949781
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgt-attatttataattttttaaggtagtttatg 568  Q
    ||||||||| || |||||||||||||||| |||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||    
T  48949696 tagcttatttta-agcttatataaaacaggttatgcaaataaatgagtttttatgtaattatttataagtttttaaggtagtttatg 48949781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 487 - 568
Target Start/End: Original strand, 1312093 - 1312174
Alignment:
Q  487 ttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||| ||||||||||| |||||||||||| || |||||||||||||||| |||||||||||| ||||||||| ||||||||    
T  1312093 ttattttagagcttataaaaaacagcttatacagataaataagtttttatatattatttataagtttttaaggcagtttatg 1312174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 486 - 565
Target Start/End: Original strand, 44799382 - 44799460
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagttt 565  Q
    |||||| |||| ||||||||||| || |||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  44799382 cttattttagaacttatataaaatagtttatgcaaataaataagtttttat-tattatttataagtttttaaggtagttt 44799460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 483 - 568
Target Start/End: Complemental strand, 2194155 - 2194069
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgta-ttatttataattttttaaggtagtttatg 568  Q
    ||||||||| || || |||||||||| | ||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||    
T  2194155 tagcttattttacagtttatataaaataacttatgcaaataattaagtttttatgtacttatttataagtttttaaggtagtttatg 2194069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 483 - 549
Target Start/End: Original strand, 22032737 - 22032803
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||    
T  22032737 tagcttattttagagcttatgtaaaacaacttatgcaaataaatatgtttttatgtattatttataa 22032803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 486 - 549
Target Start/End: Original strand, 22575564 - 22575627
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    |||||| |||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||    
T  22575564 cttattttagagcttatgtaaaacatcttatgcaaataaatacgtttttatgtattatttataa 22575627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 483 - 568
Target Start/End: Original strand, 19913920 - 19914006
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttat-aattttttaaggtagtttatg 568  Q
    ||||||||| |||||||||||||||| | |||||| |||||||||| |||||||||  ||||||| ||||| |||| ||||||||||    
T  19913920 tagcttattttagagcttatataaaataacttatgtaaataaataaatttttatgtgctatttataaatttgttaatgtagtttatg 19914006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 504 - 568
Target Start/End: Complemental strand, 21027603 - 21027538
Alignment:
Q  504 taaaacagcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagtttatg 568  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||| ||| ||||||| |||||||    
T  21027603 taaaacagcttatgtaaacaaataagtttttatgtattatttataagtttattaaggtggtttatg 21027538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 495 - 568
Target Start/End: Complemental strand, 44613572 - 44613498
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagtttatg 568  Q
    ||||||||  ||||||||||||||||||||||||| |||||| ||||||| ||||  || |||||||||||||||    
T  44613572 gagcttatgcaaaacagcttatgcaaataaataagcttttatttattattcataagcttgttaaggtagtttatg 44613498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 486 - 566
Target Start/End: Original strand, 38372536 - 38372617
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagttta 566  Q
    |||||| | ||||||||  ||||||||||||||||||||||||| | |||||||||||| |||| ||| | |||||||||||    
T  38372536 cttatttttgagcttatgcaaaacagcttatgcaaataaataagctcttatgtattattcataagtttgtcaaggtagttta 38372617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 485 - 549
Target Start/End: Original strand, 35809067 - 35809131
Alignment:
Q  485 gcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||| ||||||||||| ||| || ||||||||||||||||||  || |||||||||||||||    
T  35809067 gcttattttagagcttatacaaagcatcttatgcaaataaataagcattaatgtattatttataa 35809131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 510 - 568
Target Start/End: Original strand, 29378647 - 29378706
Alignment:
Q  510 agcttatgcaaataaataagtttttatgtattatttat-aattttttaaggtagtttatg 568  Q
    |||||||||||||||||||| ||||||||||||||||| | ||| | |||||||||||||    
T  29378647 agcttatgcaaataaataagcttttatgtattatttatgagtttgtcaaggtagtttatg 29378706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 505 - 567
Target Start/End: Original strand, 34922928 - 34922991
Alignment:
Q  505 aaaacagcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagtttat 567  Q
    |||||| |||||||||||||||||| |||||||||||||| |||| ||| | ||||||||||||    
T  34922928 aaaacaacttatgcaaataaataagcttttatgtattattcataagtttgtcaaggtagtttat 34922991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 495 - 549
Target Start/End: Original strand, 12473193 - 12473247
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||||  |||||| |||||||||| |||||||||||||||||||||| ||||    
T  12473193 gagcttatgcaaaacaacttatgcaaacaaataagtttttatgtattattcataa 12473247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 495 - 549
Target Start/End: Original strand, 41677361 - 41677415
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||| | |||||| ||||||||||||||||| ||||||||||||||| ||||    
T  41677361 gagcttaaacaaaacaacttatgcaaataaataaatttttatgtattattcataa 41677415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 512 - 549
Target Start/End: Original strand, 21249160 - 21249197
Alignment:
Q  512 cttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  21249160 cttatgcaaataaataagtttttatgtattattcataa 21249197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 495 - 544
Target Start/End: Original strand, 25907766 - 25907815
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataagtttttatgtattatt 544  Q
    ||||||||| ||||||||||||| |||||||| ||||||| |||||||||    
T  25907766 gagcttatacaaaacagcttatgtaaataaatgagtttttttgtattatt 25907815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 485 - 538
Target Start/End: Complemental strand, 34923099 - 34923046
Alignment:
Q  485 gcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgt 538  Q
    ||||||| | ||||||||| |||| |||||||||||||||||||| ||||||||    
T  34923099 gcttatttttgagcttataaaaaatagcttatgcaaataaataagcttttatgt 34923046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 496 - 536
Target Start/End: Complemental strand, 37779376 - 37779336
Alignment:
Q  496 agcttatataaaacagcttatgcaaataaataagtttttat 536  Q
    |||||||| ||||||||||||||||||||||||| ||||||    
T  37779376 agcttatacaaaacagcttatgcaaataaataagcttttat 37779336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 549
Target Start/End: Original strand, 47511045 - 47511084
Alignment:
Q  510 agcttatgcaaataaataagtttttatgtattatttataa 549  Q
    |||||||||||||||||||| |||||||||||||| ||||    
T  47511045 agcttatgcaaataaataagcttttatgtattattcataa 47511084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 495 - 538
Target Start/End: Original strand, 49104298 - 49104341
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataagtttttatgt 538  Q
    |||||||||||||| || |||||||||||||||| |||||||||    
T  49104298 gagcttatataaaatagattatgcaaataaataaatttttatgt 49104341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 510 - 544
Target Start/End: Complemental strand, 1054152 - 1054118
Alignment:
Q  510 agcttatgcaaataaataagtttttatgtattatt 544  Q
    |||||||||||||||||||| ||||||||||||||    
T  1054152 agcttatgcaaataaataagcttttatgtattatt 1054118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 486 - 540
Target Start/End: Complemental strand, 7775396 - 7775342
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtat 540  Q
    |||||| ||||| |||||||||| |  ||||||||||||||||| ||||||||||    
T  7775396 cttattttagagtttatataaaataatttatgcaaataaataagcttttatgtat 7775342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 510 - 544
Target Start/End: Complemental strand, 33288183 - 33288149
Alignment:
Q  510 agcttatgcaaataaataagtttttatgtattatt 544  Q
    |||||||||||||||||||| ||||||||||||||    
T  33288183 agcttatgcaaataaataagcttttatgtattatt 33288149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 510 - 544
Target Start/End: Original strand, 41037755 - 41037789
Alignment:
Q  510 agcttatgcaaataaataagtttttatgtattatt 544  Q
    |||||||||||||||||||| ||||||||||||||    
T  41037755 agcttatgcaaataaataagcttttatgtattatt 41037789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 511 - 549
Target Start/End: Complemental strand, 42083500 - 42083462
Alignment:
Q  511 gcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  42083500 gcttatgtaaataaataagtttttatgtattattcataa 42083462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 549
Target Start/End: Original strand, 20888570 - 20888615
Alignment:
Q  505 aaaacagcttatgcaaataaataag-tttttatgtattatttataa 549  Q
    ||||||| ||||||||||||||||| ||||||||||||||| ||||    
T  20888570 aaaacagtttatgcaaataaataagctttttatgtattattcataa 20888615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 536
Target Start/End: Complemental strand, 22032918 - 22032877
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataagtttttat 536  Q
    ||||||||  |||| |||||||||||||||||||||||||||    
T  22032918 gagcttatgaaaaaaagcttatgcaaataaataagtttttat 22032877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 536
Target Start/End: Original strand, 43818808 - 43818849
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataagtttttat 536  Q
    ||||||||  |||| |||||||||||||||||||||||||||    
T  43818808 gagcttatgaaaaagagcttatgcaaataaataagtttttat 43818849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 510 - 547
Target Start/End: Original strand, 46743952 - 46743989
Alignment:
Q  510 agcttatgcaaataaataagtttttatgtattatttat 547  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  46743952 agctcatgcaaataaataagattttatgtattatttat 46743989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 485 - 549
Target Start/End: Complemental strand, 18260954 - 18260890
Alignment:
Q  485 gcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||| ||| ||||||  |||||| |||||| |||||||||||| || |||||||| ||||||    
T  18260954 gcttattttagtgcttatgaaaaacaacttatgtaaataaataagtattaatgtattagttataa 18260890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 485 - 549
Target Start/End: Original strand, 18837199 - 18837263
Alignment:
Q  485 gcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||| | ||||||||  |||||||| |||||||||||||||| || | ||||||||| ||||    
T  18837199 gcttatttttgagcttatgcaaaacagcatatgcaaataaataagcttatgtgtattattcataa 18837263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 1e-33; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 483 - 568
Target Start/End: Complemental strand, 5203544 - 5203459
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  5203544 tagcttattttagagcttatataaaacagcttatgcaaataaataagtatttatgtattatttataaatttttaaggtagtttatg 5203459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 483 - 568
Target Start/End: Complemental strand, 33667503 - 33667418
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  33667503 tagcttattttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttacaagtttttaaggtagtttatg 33667418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 483 - 568
Target Start/End: Original strand, 33757063 - 33757148
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  33757063 tagcttattttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataagtttttaagctagtttatg 33757148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 483 - 568
Target Start/End: Original strand, 15122520 - 15122605
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  15122520 tagcttattttagagcttatataaaacaacttatgcaaagaaataagtttttatgtattatttataagtttttaaggtagtttatg 15122605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 483 - 567
Target Start/End: Complemental strand, 20458668 - 20458584
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttat 567  Q
    ||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||    
T  20458668 tagcttattttagagcttatataaaacagcttatgcaaataaatacatttttatgtattatttataagtttttaaggtagtttat 20458584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 483 - 568
Target Start/End: Complemental strand, 780678 - 780593
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||  |||||||||||||||||||| ||||||||||||||||||    
T  780678 tagcttattttagagcttatataaaacagtttatgcaaataaatacatttttatgtattatttataagtttttaaggtagtttatg 780593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 487 - 568
Target Start/End: Original strand, 4728825 - 4728906
Alignment:
Q  487 ttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||    
T  4728825 ttattttagagcttatataaaacagcttatgcaaataaataagtttttatgtattatctacaagtttttaaggtagtttatg 4728906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 483 - 568
Target Start/End: Complemental strand, 15710002 - 15709917
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||    
T  15710002 tagcttattttagagcttatataaaacaacttatgcaaataaataagtttttctgtattatttataagtttttaaagtagtttatg 15709917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 483 - 568
Target Start/End: Original strand, 17668375 - 17668460
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| |||||||||||||||||| |||||||||||||||| || |||||||||||||||||| ||||||||||||||||||    
T  17668375 tagcttattttagagcttatataaaacaacttatgcaaataaataggtgtttatgtattatttataagtttttaaggtagtttatg 17668460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 487 - 568
Target Start/End: Original strand, 2531305 - 2531386
Alignment:
Q  487 ttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||| ||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  2531305 ttattttagagtttatataaaacaacttatgcaaataaataagttgttatgtattatttataagtttttaaggtagtttatg 2531386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 483 - 566
Target Start/End: Original strand, 16722002 - 16722085
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagttta 566  Q
    ||||||||| || |||||||| |||| |  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  16722002 tagcttattttaaagcttatagaaaataatttatgcaaataaataagtttttatgtattatttataaatttttaaggtagttta 16722085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 486 - 549
Target Start/End: Original strand, 26002975 - 26003038
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    |||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  26002975 cttattttagagcttatacaaaacagtttatgcaaataaataagtttttatgtattatttataa 26003038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 495 - 549
Target Start/End: Complemental strand, 10537318 - 10537264
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  10537318 gagcttatgtaaaacagcttatgcaaataaataagcttttatgtattatttataa 10537264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 483 - 548
Target Start/End: Complemental strand, 13164861 - 13164797
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttata 548  Q
    ||||||||| |||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||    
T  13164861 tagcttattttagagcttatataaaacatcttatacaaataaataag-ttttatgtattatttata 13164797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 486 - 566
Target Start/End: Original strand, 15413970 - 15414051
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagttta 566  Q
    |||||| ||||||||||  |||||||||||||||||||||||||| || |||||||||| |||| ||| |||||||||||||    
T  15413970 cttattttagagcttatgcaaaacagcttatgcaaataaataagtattaatgtattattgataagtttgttaaggtagttta 15414051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 481 - 568
Target Start/End: Complemental strand, 6026097 - 6026010
Alignment:
Q  481 gatagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataatttt-ttaaggtagtttatg 568  Q
    ||||| ||||| ||||||||||| |||| || ||||||||||||||| | ||||||||||||||||||||||| |||| ||||||||||    
T  6026097 gatagtttattttagagcttatacaaaatagtttatgcaaataaatatg-ttttatgtattatttataattttgttaacgtagtttatg 6026010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 483 - 546
Target Start/End: Complemental strand, 6008390 - 6008327
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattattta 546  Q
    ||||||||| ||||| |||||||||||| |||||||||||||||||  ||||||||||||||||    
T  6008390 tagcttattttagagtttatataaaacaacttatgcaaataaataaacttttatgtattattta 6008327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 483 - 549
Target Start/End: Original strand, 43318978 - 43319044
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||||| ||||||||||  |||||| |||||||||||||||| || ||||||||||||||||||    
T  43318978 tagcttattttagagcttatgcaaaacaacttatgcaaataaatatgtctttatgtattatttataa 43319044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 483 - 535
Target Start/End: Original strand, 38498567 - 38498619
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagttttta 535  Q
    ||||||||| |||||||||||||||||| |||||||| |||||||||||||||    
T  38498567 tagcttattttagagcttatataaaacaacttatgcagataaataagttttta 38498619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 486 - 549
Target Start/End: Original strand, 17128256 - 17128319
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    |||||| | ||||||||  ||||||||||||||||||||||||| |||||||||||||| ||||    
T  17128256 cttatttttgagcttatgcaaaacagcttatgcaaataaataagcttttatgtattattcataa 17128319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 510 - 549
Target Start/End: Original strand, 40697003 - 40697042
Alignment:
Q  510 agcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  40697003 agcttatgcaaataaataagtttttatgtattatttataa 40697042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 495 - 549
Target Start/End: Complemental strand, 29922288 - 29922234
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||||  ||||||| |||||||||||||||||||||||||||||||| ||||    
T  29922288 gagcttatgcaaaacagtttatgcaaataaataagtttttatgtattattcataa 29922234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 484 - 549
Target Start/End: Complemental strand, 22202046 - 22201981
Alignment:
Q  484 agcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    |||||||| | ||||||||  ||||||||||||| ||||||||||| |||||||||||||| ||||    
T  22202046 agcttatttttgagcttatgcaaaacagcttatgtaaataaataagcttttatgtattattcataa 22201981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 496 - 549
Target Start/End: Original strand, 24030203 - 24030256
Alignment:
Q  496 agcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    |||||||| |||||||||||| |||||||||||| |||||||||||||| ||||    
T  24030203 agcttatacaaaacagcttatccaaataaataagcttttatgtattattcataa 24030256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 486 - 568
Target Start/End: Complemental strand, 25332346 - 25332263
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagtttatg 568  Q
    |||||| ||||| |||| ||||| ||||||||||||||||||||  || || |||||||||||| ||| |||||||| ||||||    
T  25332346 cttattttagagtttatgtaaaatagcttatgcaaataaataagcattaatatattatttataagtttgttaaggtaatttatg 25332263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 495 - 549
Target Start/End: Original strand, 1473343 - 1473397
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||||| | |||| |||||||||||||||||| |||||||||||||| ||||    
T  1473343 gagcttatacagaacaacttatgcaaataaataagcttttatgtattattcataa 1473397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 495 - 549
Target Start/End: Original strand, 22573640 - 22573694
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||||  |||||| ||||||||||||||| ||||||| ||||||||||||||    
T  22573640 gagcttatgcaaaacaacttatgcaaataaatgagtttttttgtattatttataa 22573694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 503 - 568
Target Start/End: Complemental strand, 36106830 - 36106764
Alignment:
Q  503 ataaaacagcttatgcaaataaataagtttttatgtattatttat-aattttttaaggtagtttatg 568  Q
    |||||| | |||| |||||||||||||||||||||||| ||| || ||||| |||||||||||||||    
T  36106830 ataaaataacttacgcaaataaataagtttttatgtatgattcataaatttgttaaggtagtttatg 36106764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 505 - 549
Target Start/End: Original strand, 11991302 - 11991346
Alignment:
Q  505 aaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||    
T  11991302 aaaacaacttatgtaaataaataagcttttatgtattatttataa 11991346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 549
Target Start/End: Original strand, 13739254 - 13739318
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataag-tttttatgtattatttataa 549  Q
    |||||| | ||||||||  ||||||||||||||| ||||||||| ||||||||||||||| ||||    
T  13739254 cttatttttgagcttattcaaaacagcttatgcatataaataagctttttatgtattattgataa 13739318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 505 - 568
Target Start/End: Original strand, 14243820 - 14243884
Alignment:
Q  505 aaaacagcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagtttatg 568  Q
    ||||||||||||| ||||||||||| || |||||| |||| |||| || ||||||||||||||||    
T  14243820 aaaacagcttatgtaaataaataagcttctatgtaatattcataagttgtttaaggtagtttatg 14243884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 505 - 549
Target Start/End: Original strand, 42852019 - 42852063
Alignment:
Q  505 aaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    |||||||||||| |||||||||||| |||||||||||||| ||||    
T  42852019 aaaacagcttattcaaataaataagcttttatgtattattcataa 42852063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 495 - 534
Target Start/End: Complemental strand, 589309 - 589270
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataagttttt 534  Q
    ||||||||| |||| |||||||||||||||||||||||||    
T  589309 gagcttataaaaaatagcttatgcaaataaataagttttt 589270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 506 - 549
Target Start/End: Complemental strand, 2878764 - 2878721
Alignment:
Q  506 aaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    |||||||||||||||||||||||| |||||| ||||||| ||||    
T  2878764 aaacagcttatgcaaataaataagcttttatctattattcataa 2878721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 498 - 549
Target Start/End: Complemental strand, 27982008 - 27981957
Alignment:
Q  498 cttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    |||||| |||||| |||||| |||||||||| ||||||||||||||| ||||    
T  27982008 cttatacaaaacatcttatgaaaataaataaatttttatgtattattcataa 27981957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 499 - 549
Target Start/End: Original strand, 1031411 - 1031461
Alignment:
Q  499 ttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    |||||||||||||  || |||||||||| ||||| ||||||||||||||||    
T  1031411 ttatataaaacagtatacgcaaataaattagtttgtatgtattatttataa 1031461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 495 - 568
Target Start/End: Original strand, 2670062 - 2670136
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagtttatg 568  Q
    |||||||| |||||||| ||||||||||||| ||  ||||||||| |||| |||| ||| | |||||||||||||    
T  2670062 gagcttatgtaaaacagtttatgcaaataaacaatcttttatgtactattcataagtttgtcaaggtagtttatg 2670136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 496 - 538
Target Start/End: Complemental strand, 3977628 - 3977586
Alignment:
Q  496 agcttatataaaacagcttatgcaaataaataagtttttatgt 538  Q
    |||||||  ||||||||||||||||||||||||| ||||||||    
T  3977628 agcttattaaaaacagcttatgcaaataaataagcttttatgt 3977586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 507 - 549
Target Start/End: Original strand, 7984104 - 7984146
Alignment:
Q  507 aacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    |||| ||||||||||||| ||||||||||||||||||| ||||    
T  7984104 aacaacttatgcaaataactaagtttttatgtattattcataa 7984146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 511 - 549
Target Start/End: Complemental strand, 29418835 - 29418797
Alignment:
Q  511 gcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  29418835 gcttatgcaaataaatatgtctttatgtattatttataa 29418797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 487 - 564
Target Start/End: Complemental strand, 40416079 - 40416001
Alignment:
Q  487 ttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagtt 564  Q
    ||||| ||||||||||  |||||| ||||||||||||| |||   || ||||||||||||||| ||| |||||||||||    
T  40416079 ttattatagagcttatgcaaaacaacttatgcaaataactaaacattaatgtattatttataagtttgttaaggtagtt 40416001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 511 - 549
Target Start/End: Complemental strand, 43268704 - 43268666
Alignment:
Q  511 gcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  43268704 gcttatgcaaataaataagcttttatgtattattaataa 43268666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 485 - 546
Target Start/End: Original strand, 341967 - 342028
Alignment:
Q  485 gcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattattta 546  Q
    ||||||| | ||||||||  ||| || || ||| ||||||||||||||||||||||||||||    
T  341967 gcttatttttgagcttatgcaaagcaactcatgtaaataaataagtttttatgtattattta 342028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 510 - 543
Target Start/End: Original strand, 1943012 - 1943045
Alignment:
Q  510 agcttatgcaaataaataagtttttatgtattat 543  Q
    ||||||||||| ||||||||||||||||||||||    
T  1943012 agcttatgcaagtaaataagtttttatgtattat 1943045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 496 - 549
Target Start/End: Complemental strand, 11163367 - 11163314
Alignment:
Q  496 agcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    |||||||  ||||||||||||| |||| ||||||||||||||||| ||| ||||    
T  11163367 agcttatgcaaaacagcttatgtaaatcaataagtttttatgtatgattcataa 11163314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 549
Target Start/End: Original strand, 17657246 - 17657283
Alignment:
Q  512 cttatgcaaataaataagtttttatgtattatttataa 549  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  17657246 cttatgcaaataaataagcttttatgtattattcataa 17657283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 536
Target Start/End: Complemental strand, 29659216 - 29659175
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataagtttttat 536  Q
    ||||||||  |||| |||||||||||||||||||||||||||    
T  29659216 gagcttatgaaaaagagcttatgcaaataaataagtttttat 29659175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 549
Target Start/End: Original strand, 30852167 - 30852212
Alignment:
Q  504 taaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    |||||||| ||||||||||||||||  |||||||||||||| ||||    
T  30852167 taaaacagattatgcaaataaataaacttttatgtattattaataa 30852212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 485 - 538
Target Start/End: Original strand, 41059709 - 41059762
Alignment:
Q  485 gcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgt 538  Q
    ||||||| | ||||||||  ||||||| ||||||||||||||||| ||||||||    
T  41059709 gcttatttttgagcttatgaaaaacagtttatgcaaataaataagcttttatgt 41059762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 485 - 541
Target Start/End: Original strand, 1576608 - 1576664
Alignment:
Q  485 gcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtatt 541  Q
    ||||||||| | ||||||  ||||||||||| ||||||||||||  |||||||||||    
T  1576608 gcttattcttgggcttatgcaaaacagcttaagcaaataaataaacttttatgtatt 1576664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 485 - 541
Target Start/End: Complemental strand, 1608207 - 1608151
Alignment:
Q  485 gcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtatt 541  Q
    ||||||||| | ||||||  ||||||||||| ||||||||||||  |||||||||||    
T  1608207 gcttattcttgggcttatgcaaaacagcttaagcaaataaataaacttttatgtatt 1608151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 482 - 538
Target Start/End: Original strand, 2577345 - 2577401
Alignment:
Q  482 atagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgt 538  Q
    |||||||||| | ||||||||  |||| ||||||||||||||||||| || ||||||    
T  2577345 atagcttatttttgagcttatgaaaaatagcttatgcaaataaataaattgttatgt 2577401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 513 - 549
Target Start/End: Original strand, 12467269 - 12467305
Alignment:
Q  513 ttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  12467269 ttatgcaaataaataagcttttatgtattattcataa 12467305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 549
Target Start/End: Complemental strand, 23087865 - 23087824
Alignment:
Q  506 aaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||| |||||||||||||||  |||||||||||||||||||||    
T  23087865 aaacaacttatgcaaataaat--gtttttatgtattatttataa 23087824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 513 - 549
Target Start/End: Original strand, 41534628 - 41534664
Alignment:
Q  513 ttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  41534628 ttatgcaaataaataagcttttatgtattattcataa 41534664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 3e-31; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 483 - 568
Target Start/End: Original strand, 1468151 - 1468236
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  1468151 tagcttattttagagcttatataaaatagcttatgcaaataaataagtttttatgtattatttataggtttttaaggtagtttatg 1468236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 483 - 568
Target Start/End: Complemental strand, 10184440 - 10184355
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  10184440 tagcttattttagagcttatataaaacagcttatgtaaataaataagtttttatctattatttataagtttttaaggtagtttatg 10184355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 486 - 568
Target Start/End: Original strand, 17914924 - 17915006
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    |||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||    
T  17914924 cttattttagagcttatataaaacagcttatgcaaataaatacatttttatgtattatttataagtttttaaggtagtttatg 17915006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 486 - 564
Target Start/End: Complemental strand, 32615522 - 32615444
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtt 564  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  32615522 cttattttatagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataaatttttaaggtagtt 32615444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 483 - 568
Target Start/End: Original strand, 4808547 - 4808632
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||| |||||||||    
T  4808547 tagcttattttagagcttatataaaacagcttatgcaaataaatgagttttcatgtattatttataagtttttaagatagtttatg 4808632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 495 - 568
Target Start/End: Complemental strand, 17300837 - 17300764
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    |||||||| | ||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  17300837 gagcttatttgaaacaacttatgcaaataaataagtttttatgtattatttatcattttttaaggttgtttatg 17300764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 499 - 567
Target Start/End: Complemental strand, 23314908 - 23314840
Alignment:
Q  499 ttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttat 567  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||| ||||||    
T  23314908 ttatataaaacagcttatgcaaataaataagtttttatgcgttatttataagtttttaaggtcgtttat 23314840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 499 - 567
Target Start/End: Complemental strand, 23325075 - 23325007
Alignment:
Q  499 ttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttat 567  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||| ||||||    
T  23325075 ttatataaaacagcttatgcaaataaataagtttttatgcgttatttataagtttttaaggtcgtttat 23325007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 513 - 568
Target Start/End: Complemental strand, 32165341 - 32165286
Alignment:
Q  513 ttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  32165341 ttatgaaaataaataagtttttatgtattatttataattttttaaagtagtttatg 32165286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 483 - 568
Target Start/End: Original strand, 9894741 - 9894827
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagtttatg 568  Q
    ||||||||| | ||||||||| ||||||||||| ||||||||||||  ||||||||||||||||||| ||| |||||||| ||||||    
T  9894741 tagcttattttcgagcttatacaaaacagcttacgcaaataaataatcttttatgtattatttataagtttgttaaggtattttatg 9894827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 483 - 567
Target Start/End: Complemental strand, 10401898 - 10401814
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttat 567  Q
    ||||||||| |||  |||||| |||||| |||| | |||||||||||||||||| |||||||||||  |||||||||||||||||    
T  10401898 tagcttattttagtacttatacaaaacatcttacgtaaataaataagtttttatatattatttatacgtttttaaggtagtttat 10401814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 483 - 549
Target Start/End: Original strand, 6632634 - 6632700
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||||| ||||||||||  |||||| |||||||||||||||| | |||||||||||||||||||    
T  6632634 tagcttattttagagcttattcaaaacaacttatgcaaataaatatgcttttatgtattatttataa 6632700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 487 - 549
Target Start/End: Complemental strand, 34223632 - 34223570
Alignment:
Q  487 ttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||| |||| ||||||||||||| |||||| |||||||||||||||||||| ||||||||||    
T  34223632 ttattttagaacttatataaaacaacttatgaaaataaataagtttttatgtgttatttataa 34223570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 510 - 568
Target Start/End: Complemental strand, 2034313 - 2034254
Alignment:
Q  510 agcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagtttatg 568  Q
    |||||||||||||||||||| ||||||||||||||||||| ||| | |||||||||||||    
T  2034313 agcttatgcaaataaataagcttttatgtattatttataagtttgtcaaggtagtttatg 2034254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 495 - 557
Target Start/End: Complemental strand, 22816684 - 22816622
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaa 557  Q
    ||||||||| ||||||  ||||||||||||||||||||||||||| |||| |||| |||||||    
T  22816684 gagcttataaaaaacaatttatgcaaataaataagtttttatgtaatattcataagtttttaa 22816622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 505 - 549
Target Start/End: Original strand, 30533977 - 30534021
Alignment:
Q  505 aaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||    
T  30533977 aaaacagcttatgcaaataaataagcttttatgtattattcataa 30534021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 505 - 542
Target Start/End: Complemental strand, 3211090 - 3211053
Alignment:
Q  505 aaaacagcttatgcaaataaataagtttttatgtatta 542  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  3211090 aaaacagcttatgcaaataaataagcttttatgtatta 3211053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 512 - 549
Target Start/End: Complemental strand, 9582538 - 9582501
Alignment:
Q  512 cttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  9582538 cttatgcaaataaataaatttttatgtattatttataa 9582501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 499 - 568
Target Start/End: Complemental strand, 21871378 - 21871309
Alignment:
Q  499 ttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    |||| ||||||| ||||||||||||| |||  |||||||||||||| |||| || | |||||||||||||    
T  21871378 ttatgtaaaacaacttatgcaaataagtaaacttttatgtattattgataacttgtcaaggtagtttatg 21871309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 568
Target Start/End: Original strand, 10619207 - 10619288
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagtttatg 568  Q
    |||||| |||||||||| |||| ||||||||||||||||||  |  || ||||||||||| ||| ||| |||||||||||||||    
T  10619207 cttattttagagcttatgtaaagcagcttatgcaaataaat--gcattaatgtattatttgtaagtttgttaaggtagtttatg 10619288  T

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Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 549
Target Start/End: Complemental strand, 21610150 - 21610094
Alignment:
Q  493 tagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||||||  |||||||||||||||||||||||  | |||||| |||||||||||    
T  21610150 tagagcttatgcaaaacagcttatgcaaataaatatttctttatgaattatttataa 21610094  T

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Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 486 - 549
Target Start/End: Complemental strand, 716033 - 715970
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    |||||| || |||||||  ||| || |||||| |||||||||||||| ||||||||||||||||    
T  716033 cttattttaaagcttatgcaaatcaacttatgtaaataaataagtttctatgtattatttataa 715970  T

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Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 549
Target Start/End: Original strand, 10054383 - 10054422
Alignment:
Q  510 agcttatgcaaataaataagtttttatgtattatttataa 549  Q
    |||||||||||||||||||| |||||||||||||| ||||    
T  10054383 agcttatgcaaataaataagcttttatgtattattcataa 10054422  T

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Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 568
Target Start/End: Complemental strand, 21025311 - 21025252
Alignment:
Q  510 agcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagtttatg 568  Q
    |||||||||||||||||||| |||||||||||||  ||||  || |||||||||||||||    
T  21025311 agcttatgcaaataaataagcttttatgtattatgcataagcttgttaaggtagtttatg 21025252  T

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Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 486 - 541
Target Start/End: Complemental strand, 25430871 - 25430816
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtatt 541  Q
    |||||| | |||||||| ||||||||||||| ||||||||||||  ||||||||||    
T  25430871 cttatttttgagcttatgtaaaacagcttatacaaataaataagcatttatgtatt 25430816  T

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Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 499 - 541
Target Start/End: Original strand, 6593092 - 6593134
Alignment:
Q  499 ttatataaaacagcttatgcaaataaataagtttttatgtatt 541  Q
    |||||||||||||||||||||||||||| | ||||||| ||||    
T  6593092 ttatataaaacagcttatgcaaataaattaatttttatttatt 6593134  T

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Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 495 - 541
Target Start/End: Original strand, 10687294 - 10687340
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataagtttttatgtatt 541  Q
    ||||||||  ||||||||||||||||||||||||| ||| |||||||    
T  10687294 gagcttattcaaaacagcttatgcaaataaataagctttgatgtatt 10687340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 507 - 549
Target Start/End: Complemental strand, 28758408 - 28758366
Alignment:
Q  507 aacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||| |||||||||||||||| ||||||||||||||| ||||    
T  28758408 aacagtttatgcaaataaataaatttttatgtattattcataa 28758366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 495 - 568
Target Start/End: Complemental strand, 29623576 - 29623502
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataagtttttatgtattatttat-aattttttaaggtagtttatg 568  Q
    ||||||||  |||||| |||||||||||||||||  |||||| |||||||||| | ||| |||| ||||||||||    
T  29623576 gagcttatgcaaaacaacttatgcaaataaataaccttttatttattatttatgagtttgttaatgtagtttatg 29623502  T

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Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 549
Target Start/End: Original strand, 7267771 - 7267816
Alignment:
Q  504 taaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    |||||| ||||||||||| ||||||| |||||||||||||| ||||    
T  7267771 taaaacggcttatgcaaacaaataagcttttatgtattattcataa 7267816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Original strand, 22816525 - 22816558
Alignment:
Q  505 aaaacagcttatgcaaataaataagtttttatgt 538  Q
    ||||||| ||||||||||||||||||||||||||    
T  22816525 aaaacagtttatgcaaataaataagtttttatgt 22816558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 499 - 543
Target Start/End: Original strand, 4272373 - 4272417
Alignment:
Q  499 ttatataaaacagcttatgcaaataaataagtttttatgtattat 543  Q
    ||||| ||||||  |||||||||||||||| ||||||||||||||    
T  4272373 ttatacaaaacaatttatgcaaataaataactttttatgtattat 4272417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 536
Target Start/End: Complemental strand, 6776963 - 6776923
Alignment:
Q  496 agcttatataaaacagcttatgcaaataaataagtttttat 536  Q
    |||||||  |||| |||||||||||||||||||||||||||    
T  6776963 agcttatgaaaaatagcttatgcaaataaataagtttttat 6776923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 513 - 553
Target Start/End: Complemental strand, 10021014 - 10020974
Alignment:
Q  513 ttatgcaaataaataagtttttatgtattatttataatttt 553  Q
    ||||| |||||||||| ||||||| ||||||||||||||||    
T  10021014 ttatgtaaataaataattttttatatattatttataatttt 10020974  T

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Target: scaffold0048 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 483 - 560
Target Start/End: Original strand, 59243 - 59320
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggt 560  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  59243 tagctgattttagagcttatataaaacagcttatgcaaataaataagtttttaagtattatttataagtttttaaggt 59320  T

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Target: scaffold0006 (Bit Score: 58; Significance: 4e-24; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 483 - 568
Target Start/End: Complemental strand, 279102 - 279017
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| ||||| |||||||||| | |||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||    
T  279102 tagcttattttagagattatataaaataacttatgcaaatacataaatttttatgtattatttataagtttttaaggtagtttatg 279017  T

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Target: scaffold0006; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 483 - 568
Target Start/End: Complemental strand, 40787 - 40703
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| ||||| |||||||||||| |||||||||||||||||  ||||||||||||||||||| | ||||||||||||||||    
T  40787 tagcttattttagagtttatataaaacaacttatgcaaataaataa-attttatgtattatttataagtgtttaaggtagtttatg 40703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 483 - 568
Target Start/End: Complemental strand, 38563 - 38478
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| || || |||||||||| || ||||||||||||||||||||||||||||||||||||| |||| ||| || ||||||    
T  38563 tagcttattttaaagtttatataaaatagtttatgcaaataaataagtttttatgtattatttataaattttcaagctattttatg 38478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 483 - 568
Target Start/End: Complemental strand, 242750 - 242665
Alignment:
Q  483 tagcttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||||||| || ||||||||||||| || ||||||||||||||||||||||||||||||| ||||| |||| ||| || ||||||    
T  242750 tagcttattttatagcttatataaaatagtttatgcaaataaataagtttttatgtattatatataagttttcaagctattttatg 242665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1130 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold1130
Description:

Target: scaffold1130; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 487 - 568
Target Start/End: Original strand, 2228 - 2308
Alignment:
Q  487 ttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataattttttaaggtagtttatg 568  Q
    ||||| ||||| |||||||||||| |||||||||||||||||  ||| ||||||||||||||| | ||||||||||||||||    
T  2228 ttattttagagtttatataaaacaacttatgcaaataaataa-atttaatgtattatttataaatgtttaaggtagtttatg 2308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 495 - 544
Target Start/End: Complemental strand, 43915 - 43866
Alignment:
Q  495 gagcttatataaaacagcttatgcaaataaataagtttttatgtattatt 544  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  43915 gagcttatacaaaacagcatatgcaaataaataagtttttatgtattatt 43866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 506 - 568
Target Start/End: Original strand, 178498 - 178561
Alignment:
Q  506 aaacagcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagtttatg 568  Q
    ||||| |||||||||||||||||| ||||||||||||||||||| ||| |||||||| ||||||    
T  178498 aaacaacttatgcaaataaataagcttttatgtattatttataagtttcttaaggtattttatg 178561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 505 - 549
Target Start/End: Original strand, 24742 - 24786
Alignment:
Q  505 aaaacagcttatgcaaataaataagtttttatgtattatttataa 549  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||    
T  24742 aaaacagcttatgcaaataaataagcttttatgtattattcataa 24786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 510 - 538
Target Start/End: Complemental strand, 24888 - 24860
Alignment:
Q  510 agcttatgcaaataaataagtttttatgt 538  Q
    |||||||||||||||||||||||||||||    
T  24888 agcttatgcaaataaataagtttttatgt 24860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1088 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold1088
Description:

Target: scaffold1088; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 486 - 568
Target Start/End: Original strand, 1272 - 1355
Alignment:
Q  486 cttattctagagcttatataaaacagcttatgcaaataaataagtttttatgtattatttataa-ttttttaaggtagtttatg 568  Q
    |||||| ||||||||||  |||||| ||||||||||| ||||||  || || |||||||||||| ||| |||||||||||||||    
T  1272 cttattttagagcttatgcaaaacaacttatgcaaatgaataaggattaatatattatttataagtttgttaaggtagtttatg 1355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 557
Target Start/End: Complemental strand, 14830 - 14783
Alignment:
Q  510 agcttatgcaaataaataagtttttatgtattatttataattttttaa 557  Q
    ||||||| |||||||||||| |||||||||||||| |||| |||||||    
T  14830 agcttatacaaataaataagcttttatgtattattcataagtttttaa 14783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 497 - 543
Target Start/End: Original strand, 1047 - 1093
Alignment:
Q  497 gcttatataaaacagcttatgcaaataaataagtttttatgtattat 543  Q
    ||||||| |||||| |||||||||||||||||| |||||| ||||||    
T  1047 gcttatacaaaacaacttatgcaaataaataagcttttatttattat 1093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 497 - 543
Target Start/End: Complemental strand, 11397 - 11351
Alignment:
Q  497 gcttatataaaacagcttatgcaaataaataagtttttatgtattat 543  Q
    ||||||| |||||| |||||||||||||||||| |||||| ||||||    
T  11397 gcttatacaaaacaacttatgcaaataaataagcttttatttattat 11351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 496 - 538
Target Start/End: Original strand, 48559 - 48601
Alignment:
Q  496 agcttatataaaacagcttatgcaaataaataagtttttatgt 538  Q
    |||||||| |||| |||||||||||||||||||| ||||||||    
T  48559 agcttatacaaaatagcttatgcaaataaataagcttttatgt 48601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 303 - 375
Target Start/End: Original strand, 23033 - 23105
Alignment:
Q  303 tagtgtagagagactatgataaaagtgtgttccataatcgatctaatggttaaaaagtaactttcctatgatg 375  Q
    |||||| ||||||| ||||||||| | |||||| || |  ||||||||||| |||| ||||||||| ||||||    
T  23033 tagtgttgagagaccatgataaaattatgttccctatttaatctaatggttcaaaactaactttcccatgatg 23105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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