View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4514_low_17 (Length: 238)

Name: NF4514_low_17
Description: NF4514
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4514_low_17
NF4514_low_17
[»] scaffold0449 (1 HSPs)
scaffold0449 (53-146)||(4190-4286)
[»] chr4 (39 HSPs)
chr4 (170-238)||(4896648-4896716)
chr4 (172-238)||(26250911-26250977)
chr4 (170-237)||(15660183-15660250)
chr4 (170-238)||(41498581-41498649)
chr4 (170-238)||(49111403-49111471)
chr4 (170-237)||(15660275-15660342)
chr4 (172-238)||(10127976-10128042)
chr4 (172-236)||(42844636-42844700)
chr4 (172-238)||(4896723-4896789)
chr4 (172-238)||(31742778-31742844)
chr4 (170-227)||(2125857-2125914)
chr4 (170-238)||(1112605-1112673)
chr4 (170-238)||(11040968-11041035)
chr4 (170-238)||(31473849-31473917)
chr4 (170-237)||(857331-857398)
chr4 (170-236)||(5715744-5715810)
chr4 (172-234)||(7352814-7352876)
chr4 (170-236)||(7352905-7352971)
chr4 (170-227)||(1107154-1107211)
chr4 (173-238)||(10633035-10633100)
chr4 (170-227)||(36455907-36455964)
chr4 (171-227)||(4441338-4441394)
chr4 (170-237)||(10128066-10128133)
chr4 (170-237)||(28845963-28846030)
chr4 (170-224)||(14982280-14982334)
chr4 (170-227)||(11348339-11348396)
chr4 (178-238)||(1539649-1539709)
chr4 (170-224)||(16516171-16516225)
chr4 (170-219)||(31742874-31742923)
chr4 (170-227)||(36456028-36456085)
chr4 (170-237)||(1107051-1107119)
chr4 (170-238)||(1112713-1112781)
chr4 (172-236)||(19461743-19461807)
chr4 (175-227)||(28845876-28845928)
chr4 (196-238)||(21012500-21012542)
chr4 (170-227)||(35470122-35470179)
chr4 (172-217)||(42542979-42543024)
chr4 (170-227)||(55266877-55266934)
chr4 (170-234)||(52493926-52493988)
[»] chr3 (40 HSPs)
chr3 (170-238)||(46429487-46429555)
chr3 (170-238)||(47284317-47284385)
chr3 (170-238)||(9129435-9129503)
chr3 (170-238)||(9137542-9137610)
chr3 (170-238)||(46672807-46672875)
chr3 (172-238)||(39215929-39215995)
chr3 (170-227)||(5415783-5415840)
chr3 (189-238)||(31070497-31070546)
chr3 (170-227)||(49457343-49457400)
chr3 (170-238)||(27251985-27252053)
chr3 (170-238)||(28092214-28092282)
chr3 (170-234)||(44436258-44436322)
chr3 (170-238)||(44692913-44692981)
chr3 (172-231)||(42130694-42130753)
chr3 (170-227)||(5415885-5415942)
chr3 (170-227)||(36398004-36398061)
chr3 (170-227)||(44692822-44692879)
chr3 (170-227)||(47767432-47767489)
chr3 (170-227)||(53129858-53129915)
chr3 (170-226)||(7302346-7302402)
chr3 (174-238)||(21307536-21307600)
chr3 (170-238)||(31189401-31189469)
chr3 (170-226)||(46001364-46001420)
chr3 (170-224)||(42005971-42006025)
chr3 (170-227)||(9129344-9129401)
chr3 (170-227)||(9137451-9137508)
chr3 (170-227)||(37054394-37054451)
chr3 (170-227)||(37321550-37321607)
chr3 (170-227)||(53470444-53470501)
chr3 (178-238)||(31070415-31070474)
chr3 (170-237)||(39110394-39110461)
chr3 (174-224)||(35279920-35279970)
chr3 (170-227)||(34088571-34088628)
chr3 (170-227)||(46635857-46635914)
chr3 (170-226)||(671635-671691)
chr3 (170-233)||(21730902-21730965)
chr3 (170-201)||(47284226-47284257)
chr3 (174-227)||(1146960-1147013)
chr3 (170-227)||(48947605-48947662)
chr3 (178-238)||(19475824-19475884)
[»] chr1 (43 HSPs)
chr1 (172-238)||(40264121-40264187)
chr1 (172-238)||(38277506-38277571)
chr1 (172-238)||(50005170-50005236)
chr1 (171-238)||(32573013-32573080)
chr1 (172-238)||(34756518-34756584)
chr1 (170-238)||(15034750-15034818)
chr1 (170-238)||(23536067-23536135)
chr1 (170-238)||(30190227-30190295)
chr1 (170-238)||(38277415-38277483)
chr1 (170-234)||(44410406-44410470)
chr1 (173-236)||(37036956-37037019)
chr1 (170-224)||(8224768-8224822)
chr1 (170-227)||(4038177-4038234)
chr1 (172-233)||(28745799-28745860)
chr1 (170-238)||(4038075-4038143)
chr1 (170-238)||(24273225-24273293)
chr1 (170-238)||(25889158-25889225)
chr1 (174-238)||(27804269-27804333)
chr1 (170-238)||(34756427-34756495)
chr1 (175-238)||(28745887-28745950)
chr1 (170-237)||(31166310-31166377)
chr1 (170-236)||(26501086-26501152)
chr1 (170-227)||(15034659-15034716)
chr1 (173-234)||(45565397-45565458)
chr1 (170-227)||(50005079-50005136)
chr1 (172-228)||(28632600-28632656)
chr1 (170-237)||(27935577-27935644)
chr1 (170-227)||(6470702-6470759)
chr1 (170-227)||(47165228-47165285)
chr1 (194-238)||(37214843-37214887)
chr1 (170-238)||(44410311-44410379)
chr1 (170-233)||(29446750-29446813)
chr1 (170-236)||(32287940-32288006)
chr1 (172-238)||(34003379-34003445)
chr1 (170-227)||(10166499-10166556)
chr1 (170-227)||(27804367-27804424)
chr1 (179-224)||(37448420-37448465)
chr1 (170-218)||(43623003-43623051)
chr1 (170-200)||(17502198-17502228)
chr1 (188-238)||(31195474-31195524)
chr1 (177-227)||(37447918-37447968)
chr1 (179-227)||(44570687-44570735)
chr1 (170-238)||(49659217-49659284)
[»] chr2 (32 HSPs)
chr2 (170-237)||(17180297-17180364)
chr2 (170-238)||(41461606-41461674)
chr2 (172-238)||(41461517-41461583)
chr2 (170-238)||(14365700-14365768)
chr2 (172-238)||(11532258-11532324)
chr2 (172-238)||(11793897-11793963)
chr2 (172-238)||(44256198-44256263)
chr2 (170-227)||(784895-784952)
chr2 (170-238)||(14537199-14537267)
chr2 (170-238)||(27033490-27033558)
chr2 (174-227)||(11684603-11684656)
chr2 (170-227)||(14365801-14365858)
chr2 (170-238)||(10480119-10480187)
chr2 (170-238)||(11716408-11716476)
chr2 (170-238)||(17905654-17905722)
chr2 (170-224)||(45094490-45094544)
chr2 (170-227)||(769036-769093)
chr2 (170-227)||(1583825-1583882)
chr2 (170-227)||(10244177-10244234)
chr2 (170-227)||(11141305-11141362)
chr2 (178-227)||(11716501-11716550)
chr2 (170-227)||(33189273-33189330)
chr2 (170-227)||(35047695-35047752)
chr2 (170-238)||(13017779-13017847)
chr2 (173-236)||(28740599-28740662)
chr2 (171-233)||(30751356-30751418)
chr2 (178-227)||(30698289-30698338)
chr2 (170-233)||(39630225-39630288)
chr2 (170-224)||(7228031-7228085)
chr2 (176-238)||(40026070-40026132)
chr2 (170-219)||(11981580-11981629)
chr2 (206-238)||(11595355-11595387)
[»] chr8 (36 HSPs)
chr8 (172-238)||(13404829-13404895)
chr8 (170-238)||(37268098-37268166)
chr8 (172-238)||(3853707-3853773)
chr8 (172-238)||(3858165-3858231)
chr8 (170-227)||(14800062-14800119)
chr8 (170-227)||(24044960-24045017)
chr8 (170-238)||(3853616-3853684)
chr8 (170-238)||(3858074-3858142)
chr8 (172-227)||(4156269-4156324)
chr8 (170-237)||(17110869-17110936)
chr8 (170-233)||(31807409-31807471)
chr8 (187-238)||(40046881-40046932)
chr8 (170-237)||(42711372-42711439)
chr8 (170-228)||(14991692-14991750)
chr8 (170-227)||(33902667-33902724)
chr8 (170-237)||(40046804-40046871)
chr8 (170-236)||(44889354-44889420)
chr8 (170-227)||(11744745-11744802)
chr8 (170-227)||(17110971-17111028)
chr8 (170-227)||(28324688-28324745)
chr8 (170-227)||(29257377-29257434)
chr8 (170-227)||(33377323-33377380)
chr8 (170-238)||(23011734-23011802)
chr8 (170-238)||(33986004-33986072)
chr8 (172-227)||(29482833-29482888)
chr8 (187-237)||(13404919-13404969)
chr8 (170-236)||(36103101-36103167)
chr8 (170-227)||(14239-14295)
chr8 (174-227)||(44346704-44346757)
chr8 (170-218)||(32626069-32626117)
chr8 (187-238)||(8049271-8049322)
chr8 (170-236)||(515549-515615)
chr8 (170-235)||(1088295-1088360)
chr8 (170-215)||(27322687-27322732)
chr8 (173-238)||(35979019-35979084)
chr8 (170-238)||(9982637-9982704)
[»] chr5 (46 HSPs)
chr5 (172-238)||(28828438-28828504)
chr5 (170-238)||(37722896-37722964)
chr5 (170-233)||(6634015-6634078)
chr5 (170-233)||(40643913-40643976)
chr5 (172-238)||(2721562-2721628)
chr5 (170-227)||(9764338-9764395)
chr5 (170-227)||(15374062-15374119)
chr5 (168-237)||(15804320-15804389)
chr5 (170-238)||(9764429-9764497)
chr5 (170-238)||(32390063-32390131)
chr5 (170-238)||(40090416-40090484)
chr5 (170-227)||(2316378-2316435)
chr5 (170-227)||(16515120-16515177)
chr5 (170-227)||(22303883-22303940)
chr5 (170-227)||(22766952-22767009)
chr5 (170-227)||(26281282-26281339)
chr5 (172-225)||(28828369-28828422)
chr5 (171-227)||(3563278-3563334)
chr5 (170-238)||(15373960-15374028)
chr5 (171-227)||(20523235-20523291)
chr5 (170-238)||(25935292-25935360)
chr5 (172-219)||(13243514-13243561)
chr5 (172-227)||(32389974-32390029)
chr5 (170-225)||(13243457-13243514)
chr5 (172-238)||(19533909-19533975)
chr5 (170-227)||(927302-927359)
chr5 (170-227)||(23091963-23092019)
chr5 (170-227)||(32250111-32250167)
chr5 (170-227)||(35379344-35379400)
chr5 (170-227)||(41762228-41762285)
chr5 (172-224)||(15804399-15804451)
chr5 (170-238)||(20523133-20523201)
chr5 (170-237)||(40809341-40809408)
chr5 (172-238)||(37145503-37145569)
chr5 (170-227)||(23092064-23092121)
chr5 (170-227)||(34982216-34982272)
chr5 (170-238)||(2316470-2316537)
chr5 (174-238)||(9894324-9894388)
chr5 (170-234)||(32470882-32470946)
chr5 (170-237)||(32470974-32471039)
chr5 (171-227)||(33245385-33245441)
chr5 (188-234)||(8255045-8255091)
chr5 (178-219)||(12991333-12991374)
chr5 (174-227)||(16515009-16515061)
chr5 (170-238)||(11601040-11601107)
chr5 (170-226)||(40809444-40809500)
[»] chr7 (40 HSPs)
chr7 (170-238)||(5644768-5644836)
chr7 (170-238)||(21635885-21635953)
chr7 (170-238)||(29065910-29065978)
chr7 (170-238)||(35776946-35777014)
chr7 (170-227)||(2057497-2057554)
chr7 (170-227)||(40110737-40110794)
chr7 (170-227)||(43955517-43955574)
chr7 (170-238)||(2057395-2057463)
chr7 (170-238)||(26162128-26162196)
chr7 (170-238)||(31632722-31632790)
chr7 (172-227)||(43955616-43955671)
chr7 (170-236)||(6498758-6498824)
chr7 (170-236)||(25189219-25189285)
chr7 (174-227)||(23455249-23455302)
chr7 (170-227)||(28539170-28539227)
chr7 (170-238)||(34398939-34399008)
chr7 (170-238)||(5644677-5644745)
chr7 (170-238)||(29065819-29065887)
chr7 (170-238)||(34388356-34388424)
chr7 (170-238)||(40110829-40110897)
chr7 (170-238)||(44915195-44915263)
chr7 (172-237)||(46069483-46069545)
chr7 (170-227)||(14603264-14603321)
chr7 (170-227)||(35455804-35455861)
chr7 (170-227)||(39342644-39342701)
chr7 (171-227)||(9784933-9784989)
chr7 (170-238)||(29639206-29639274)
chr7 (170-217)||(29195709-29195756)
chr7 (170-237)||(49052786-49052852)
chr7 (172-238)||(22391578-22391644)
chr7 (170-227)||(18789248-18789305)
chr7 (170-227)||(23548613-23548670)
chr7 (170-227)||(34388265-34388322)
chr7 (196-238)||(43791116-43791158)
chr7 (172-221)||(18926812-18926861)
chr7 (168-201)||(19865564-19865597)
chr7 (176-237)||(21635977-21636038)
chr7 (170-227)||(30524255-30524312)
chr7 (179-227)||(22351874-22351922)
chr7 (170-237)||(40854061-40854129)
[»] chr6 (17 HSPs)
chr6 (170-238)||(9763103-9763171)
chr6 (170-237)||(9285647-9285714)
chr6 (170-236)||(34244987-34245053)
chr6 (170-227)||(6919809-6919866)
chr6 (172-238)||(6919710-6919776)
chr6 (172-238)||(9763014-9763080)
chr6 (170-236)||(29889441-29889507)
chr6 (170-227)||(8574695-8574752)
chr6 (170-227)||(8574767-8574824)
chr6 (170-238)||(13487275-13487343)
chr6 (174-238)||(15299516-15299579)
chr6 (170-238)||(28918165-28918233)
chr6 (170-238)||(1368477-1368545)
chr6 (170-227)||(776080-776137)
chr6 (170-227)||(776182-776239)
chr6 (174-227)||(15832470-15832523)
chr6 (170-210)||(33733432-33733472)
[»] scaffold1562 (2 HSPs)
scaffold1562 (172-238)||(496-562)
scaffold1562 (170-227)||(405-462)
[»] scaffold1158 (2 HSPs)
scaffold1158 (172-238)||(2031-2097)
scaffold1158 (170-227)||(2131-2188)
[»] scaffold0044 (1 HSPs)
scaffold0044 (174-227)||(56376-56429)
[»] scaffold0400 (1 HSPs)
scaffold0400 (171-235)||(4506-4570)
[»] scaffold0365 (1 HSPs)
scaffold0365 (171-235)||(5150-5214)
[»] scaffold0129 (1 HSPs)
scaffold0129 (172-238)||(19200-19265)
[»] scaffold0169 (1 HSPs)
scaffold0169 (170-238)||(4075-4143)
[»] scaffold0009 (2 HSPs)
scaffold0009 (170-238)||(41997-42065)
scaffold0009 (170-227)||(42080-42137)
[»] scaffold0048 (1 HSPs)
scaffold0048 (172-227)||(82945-83000)
[»] scaffold0318 (1 HSPs)
scaffold0318 (170-233)||(2867-2930)
[»] scaffold0301 (1 HSPs)
scaffold0301 (172-227)||(7153-7208)
[»] scaffold0027 (1 HSPs)
scaffold0027 (171-236)||(10887-10952)


Alignment Details
Target: scaffold0449 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 53 - 146
Target Start/End: Original strand, 4190 - 4286
Alignment:
Q  53 gatagccatggtgagggaggagaagaaatgagaaatgtggtagctgtagtcgatcataatgggagtaatgag---atttatatataccatttctttt 146  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||    
T  4190 gatagccatggtgagggaagagaagaaatgagaaatgtggtagctgtagtcgatcataatgggagtaatgagggaatttatatataccatttttttt 4286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 3e-26; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 4896648 - 4896716
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4896648 agagtgtgtttggatgggggaatattttgaggtaatgtaatgttttgagggaattcaattattttgagg 4896716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 26250911 - 26250977
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  26250911 agtgtgtttggatgagggaatattttgaggtaatgtaatgttttgaggaaattcaattattttgagg 26250977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 170 - 237
Target Start/End: Original strand, 15660183 - 15660250
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgag 237  Q
    |||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15660183 agagtgtgtttggataggggaatattttgaggtaatgtaatgttttgagggaattcaattattttgag 15660250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 41498649 - 41498581
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  41498649 agagtgtgtttggatggaggaatattttgagggaatgtaatgttttgaaggaattcaattattttgagg 41498581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 49111471 - 49111403
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||| ||||||||||    
T  49111471 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactattttgagg 49111403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 15660342 - 15660275
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgag 237  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| || ||||||    
T  15660342 agagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattcaactactttgag 15660275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 10127976 - 10128042
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||| ||||||||||||| | ||||||||||||||| ||||||||||||||||||||    
T  10127976 agtgtgtttggatgggggaatattttgaagtaatgtaatgttttgaaggaattcaattattttgagg 10128042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 172 - 236
Target Start/End: Complemental strand, 42844700 - 42844636
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttga 236  Q
    |||||||||||||| || |||||||||||| |||||||||||||||||||| |||||||||||||    
T  42844700 agtgtgtttggatggggaaatattttgaggtaatgtaatgttttgagggaaatcaattattttga 42844636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 4896789 - 4896723
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||| || |||||||||||| ||||||||||||||||||||||||| || |||||||    
T  4896789 agtgtgtttggatggggaaatattttgagggaatgtaatgttttgagggaattcaactactttgagg 4896723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 31742778 - 31742844
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    ||||||||||||||  |||||||||| ||| | ||||||||||||||||||||||||||||||||||    
T  31742778 agtgtgtttggatggaggaatattttaaggtagtgtaatgttttgagggaattcaattattttgagg 31742844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 2125857 - 2125914
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||    
T  2125857 agagtgtgtttggatgggggaatattttgagggaatgtattgttttgagggaattcaa 2125914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 1112605 - 1112673
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||||| |||||| |||||||| |||||||||||| |||||||||||| || |||||||    
T  1112605 agagtgtgtttggatgggggaatgttttgaggaaatgtaatgtttcgagggaattcaactactttgagg 1112673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 11040968 - 11041035
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||| || |||||||    
T  11040968 agagtgtgtttggatg-gggaatattttgagggaatgtaatgttttgagagaattcaactactttgagg 11041035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 31473849 - 31473917
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||||| |||||| |||||||| ||||||||||| ||||||||||||| || |||||||    
T  31473849 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgagg 31473917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 857398 - 857331
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgag 237  Q
    |||||||||||||||| || ||| |||||||| ||||||||||||||||||||||||| || ||||||    
T  857398 agagtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaattcaactactttgag 857331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 170 - 236
Target Start/End: Original strand, 5715744 - 5715810
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttga 236  Q
    ||||||||||||||||||||||| |||||||  ||||||||||||||||| ||||||| || |||||    
T  5715744 agagtgtgtttggatgagggaatgttttgagataatgtaatgttttgaggtaattcaaatactttga 5715810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 172 - 234
Target Start/End: Original strand, 7352814 - 7352876
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattatttt 234  Q
    |||||||||||||| |||||| |||||||| ||||||||||||||| ||||||||| ||||||    
T  7352814 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgatggaattcaactatttt 7352876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 170 - 236
Target Start/End: Complemental strand, 7352971 - 7352905
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttga 236  Q
    |||||||||||||||| || ||| |||||||| ||||||||||||||||||||||||| || |||||    
T  7352971 agagtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaattcaactactttga 7352905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 1107211 - 1107154
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    ||||||| |||||||| ||||||||||||||| ||| |||||||||||||||||||||    
T  1107211 agagtgtatttggatgggggaatattttgagggaatataatgttttgagggaattcaa 1107154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 238
Target Start/End: Original strand, 10633035 - 10633100
Alignment:
Q  173 gtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    ||||||||||||| |||||| |||||||| ||||||||||| ||||||||||||| || |||||||    
T  10633035 gtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgagg 10633100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 36455907 - 36455964
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| |||||| |||||||| ||| |||||||||||||||||||||    
T  36455907 agagtgtgtttggatgggggaatgttttgagggaatctaatgttttgagggaattcaa 36455964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 227
Target Start/End: Original strand, 4441338 - 4441394
Alignment:
Q  171 gagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||  ||||| |||||||| |||||||||||||||||||||||||    
T  4441338 gagtgtgtttggatggtggaatgttttgagggaatgtaatgttttgagggaattcaa 4441394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 10128133 - 10128066
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgag 237  Q
    ||||||| |||||||| |||||| |||||||  ||||||||||||||||||||||||| || ||||||    
T  10128133 agagtgtatttggatgggggaatgttttgagagaatgtaatgttttgagggaattcaactactttgag 10128066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 28846030 - 28845963
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgag 237  Q
    |||||||||||||||| || ||| |||||||| ||| ||||||||||||||||||||| || ||||||    
T  28846030 agagtgtgtttggatggggaaatgttttgagggaatataatgttttgagggaattcaactactttgag 28845963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 224
Target Start/End: Original strand, 14982280 - 14982334
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaatt 224  Q
    ||||||||||||||||  ||||| |||||||| ||||||||||||||||||||||    
T  14982280 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaatt 14982334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 11348396 - 11348339
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    ||||||| |||||||| |||||| |||| ||| |||||||||||||||||||||||||    
T  11348396 agagtgtatttggatgggggaatgttttaagggaatgtaatgttttgagggaattcaa 11348339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 1539649 - 1539709
Alignment:
Q  178 tttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    ||||||||  ||||| |||||||| ||||||||||||||||||||||||| || |||||||    
T  1539649 tttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaaatactttgagg 1539709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 224
Target Start/End: Original strand, 16516171 - 16516225
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaatt 224  Q
    |||||||||||||||| |||||| |||||| | ||||||||||||||| ||||||    
T  16516171 agagtgtgtttggatgggggaatgttttgacggaatgtaatgttttgaaggaatt 16516225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 31742923 - 31742874
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagg 219  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||||||||    
T  31742923 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagg 31742874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 36456085 - 36456028
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    ||||||||||||||||  ||||| |||||||| |||||||| |||||||| |||||||    
T  36456085 agagtgtgtttggatggaggaatgttttgagggaatgtaatattttgaggaaattcaa 36456028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 237
Target Start/End: Original strand, 1107051 - 1107119
Alignment:
Q  170 agagtgtgtttggatgagggaatattttga-ggcaatgtaatgttttgagggaattcaattattttgag 237  Q
    ||||||||||||||||||| ||| |||| | || ||||||||||||||| ||||||||| || ||||||    
T  1107051 agagtgtgtttggatgaggaaatttttttaagggaatgtaatgttttgaaggaattcaactactttgag 1107119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 1112781 - 1112713
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    ||||| |||||||||| ||| || |||||||  |||||||||||| |||||||||||| || |||||||    
T  1112781 agagtttgtttggatggggggatgttttgagcaaatgtaatgtttcgagggaattcaactactttgagg 1112713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 236
Target Start/End: Complemental strand, 19461807 - 19461743
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttga 236  Q
    ||||| |||||||| || |||||||||| | |||||||||||||||| |||||||| || |||||    
T  19461807 agtgtttttggatggggaaatattttgaagtaatgtaatgttttgagcgaattcaaataatttga 19461743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 28845876 - 28845928
Alignment:
Q  175 gtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||  ||||| |||||||| |||||||||||| ||||||||||||    
T  28845876 gtgtttggatggaggaatgttttgagggaatgtaatgtttcgagggaattcaa 28845928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 238
Target Start/End: Complemental strand, 21012542 - 21012500
Alignment:
Q  196 ttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||| ||||||||||| ||||||||||||| ||||||||||    
T  21012542 ttgaggaaatgtaatgttatgagggaattcaaatattttgagg 21012500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 35470122 - 35470179
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    ||||||||||| ||||  | ||| |||||||| |||||| ||||||||||||||||||    
T  35470122 agagtgtgtttagatggtgaaatgttttgagggaatgtattgttttgagggaattcaa 35470179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 42543024 - 42542979
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 217  Q
    ||||||||||||||  ||||| |||||||| |||||||||||||||    
T  42543024 agtgtgtttggatggtggaatgttttgagggaatgtaatgttttga 42542979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 55266934 - 55266877
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    ||||||||||||||||   |||| |||||||| ||| |||| ||||||||||||||||    
T  55266934 agagtgtgtttggatggatgaatgttttgaggaaatataatattttgagggaattcaa 55266877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 234
Target Start/End: Original strand, 52493926 - 52493988
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattatttt 234  Q
    |||||||||||||||| |||||| |||||| | ||||||||| |||||||||||| || ||||||    
T  52493926 agagtgtgtttggatg-gggaatgttttgaagtaatgtaatg-tttgagggaattaaaatatttt 52493988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 3e-26; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 46429555 - 46429487
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  46429555 agagtgtgtttggatgagggaatattttgaggtaatgtaatgttttgaaggaattcaattattttgagg 46429487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 47284385 - 47284317
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  47284385 agagtgtgtttggatgagagaatattttgaggtaatgtaatgttttgagggaattcaattattttgagg 47284317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 9129503 - 9129435
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| || |||||||    
T  9129503 agagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagg 9129435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 9137610 - 9137542
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| || |||||||    
T  9137610 agagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagg 9137542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 46672875 - 46672807
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||| || |||||||    
T  46672875 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagg 46672807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 39215995 - 39215929
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||||| ||||||||||||| ||| ||||||||||||  ||||||||||||||||||    
T  39215995 agtgtgtttggatgagagaatattttgaggtaatataatgttttgagaaaattcaattattttgagg 39215929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 5415783 - 5415840
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||    
T  5415783 agagtgtgtttggataggggaatattttgagggaatgtaatgttttgagggaattcaa 5415840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 31070546 - 31070497
Alignment:
Q  189 gaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  31070546 gaatattttgaggtaatgtaatgttttgagggaattcaattattttgagg 31070497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 49457343 - 49457400
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||    
T  49457343 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaa 49457400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 27252053 - 27251985
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||||| ||| || |||||||| ||||||||||||||||||||||||| || |||||||    
T  27252053 agagtgtgtttggatggggggatgttttgagggaatgtaatgttttgagggaattcaactactttgagg 27251985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 28092214 - 28092282
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    ||||| |||||||||| |||||| |||||||| ||||| |||||||||||||||||||||| |||||||    
T  28092214 agagtatgtttggatgggggaatgttttgaggaaatgtgatgttttgagggaattcaattactttgagg 28092282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 170 - 234
Target Start/End: Original strand, 44436258 - 44436322
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattatttt 234  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||| ||||||| ||||||    
T  44436258 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggaaattcaactatttt 44436322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 44692981 - 44692913
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    ||||||||||||||||  ||||| |||||||| ||||||||||||||||||||||||| || |||||||    
T  44692981 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagg 44692913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 231
Target Start/End: Original strand, 42130694 - 42130753
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattat 231  Q
    ||||||||||| || |||||||||||||||  ||||||||||||||||||||||||||||    
T  42130694 agtgtgtttgggtgggggaatattttgaggtgatgtaatgttttgagggaattcaattat 42130753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 5415942 - 5415885
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| ||||||||||||||| || |||||||||||| |||||||||    
T  5415942 agagtgtgtttggatgggggaatattttgagggaaagtaatgttttgatggaattcaa 5415885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 36398061 - 36398004
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| |||||| |||||||| |||||| ||||||||||||||||||    
T  36398061 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttgagggaattcaa 36398004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 44692822 - 44692879
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| |||||| |||||||| || ||||||||||||||||||||||    
T  44692822 agagtgtgtttggatgggggaatgttttgagggaaagtaatgttttgagggaattcaa 44692879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 47767432 - 47767489
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||| |||||||||    
T  47767432 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaaggaattcaa 47767489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 53129915 - 53129858
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    ||||||||||||||||||||||| ||| |||| ||||||||||||| |||||||||||    
T  53129915 agagtgtgtttggatgagggaatgtttcgagggaatgtaatgttttaagggaattcaa 53129858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 226
Target Start/End: Original strand, 7302346 - 7302402
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattca 226  Q
    ||||||||||||||||||||||| |||||||  ||||||||||||||| ||||||||    
T  7302346 agagtgtgtttggatgagggaatgttttgagagaatgtaatgttttgaaggaattca 7302402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 21307600 - 21307536
Alignment:
Q  174 tgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||| |||||| ||||| || ||||||||||||||||||||||||| || |||||||    
T  21307600 tgtgtttggatgggggaatgttttgcgggaatgtaatgttttgagggaattcaaatactttgagg 21307536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 31189469 - 31189401
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||| ||||| |||| |||||||| |||||||||||||||| |||||||| || |||||||    
T  31189469 agagtgtgtttgaatgagagaatgttttgaggtaatgtaatgttttgagagaattcaaatactttgagg 31189401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 226
Target Start/End: Original strand, 46001364 - 46001420
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattca 226  Q
    ||||||||||||||||  |||||||||||||| |||||||||||| |||||||||||    
T  46001364 agagtgtgtttggatggcggaatattttgaggtaatgtaatgtttcgagggaattca 46001420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 224
Target Start/End: Complemental strand, 42006025 - 42005971
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaatt 224  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||| ||||||    
T  42006025 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaaggaatt 42005971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 9129344 - 9129401
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| | || |||||||||| ||||||||||||||| |||||||||    
T  9129344 agagtgtgtttggatgggagactattttgagggaatgtaatgttttgatggaattcaa 9129401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 9137451 - 9137508
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| | || |||||||||| ||||||||||||||| |||||||||    
T  9137451 agagtgtgtttggatgggagactattttgagggaatgtaatgttttgatggaattcaa 9137508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 37054394 - 37054451
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| |||||| |||| ||| ||||||||||||||| |||||||||    
T  37054394 agagtgtgtttggatgggggaatgttttaagggaatgtaatgttttgaaggaattcaa 37054451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 37321550 - 37321607
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    ||||||| |||||||| ||||||||||||||| || |||||||||||||| |||||||    
T  37321550 agagtgtatttggatgggggaatattttgaggaaaagtaatgttttgaggaaattcaa 37321607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 53470501 - 53470444
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    ||||||||||||||||||| ||| |||||||| ||| || ||||||||||||||||||    
T  53470501 agagtgtgtttggatgaggaaatgttttgagggaatctattgttttgagggaattcaa 53470444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 31070415 - 31070474
Alignment:
Q  178 tttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||| |||||| |||||||| ||||||||||||||||||||||||| || |||||||    
T  31070415 tttggatg-gggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagg 31070474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 237
Target Start/End: Original strand, 39110394 - 39110461
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgag 237  Q
    ||||||||||||||||| | ||| |||||||  |||||||||||||| |||||||||| || ||||||    
T  39110394 agagtgtgtttggatgaagaaatgttttgagcgaatgtaatgttttgtgggaattcaactactttgag 39110461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 35279970 - 35279920
Alignment:
Q  174 tgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaatt 224  Q
    |||||||||||| |||||| |||||||| |||||||||||||||| |||||    
T  35279970 tgtgtttggatgggggaatgttttgagggaatgtaatgttttgagtgaatt 35279920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 34088571 - 34088628
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    ||||||||||||||||  | ||| |||||||| |||||| ||||||||||||||||||    
T  34088571 agagtgtgtttggatggagaaatgttttgagggaatgtattgttttgagggaattcaa 34088628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 46635857 - 46635914
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    ||||||||||||||||||  ||| |||||||  ||||||||||||||||| |||||||    
T  46635857 agagtgtgtttggatgagaaaatgttttgagctaatgtaatgttttgaggaaattcaa 46635914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 226
Target Start/End: Complemental strand, 671691 - 671635
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattca 226  Q
    ||||||| |||||||  |||||| |||||||| |||||| |||||||||||||||||    
T  671691 agagtgtttttggataggggaatgttttgagggaatgtattgttttgagggaattca 671635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 233
Target Start/End: Original strand, 21730902 - 21730965
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattt 233  Q
    ||||||||||||||||||||||| |  | |||  |||||||||||||| ||||||||| |||||    
T  21730902 agagtgtgtttggatgagggaatgtcctaaggttatgtaatgttttgaaggaattcaaatattt 21730965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 201
Target Start/End: Complemental strand, 47284257 - 47284226
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgagg 201  Q
    ||||||||||||||||||||||||||||||||    
T  47284257 agagtgtgtttggatgagggaatattttgagg 47284226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 1147013 - 1146960
Alignment:
Q  174 tgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||| ||||||||||||||||||  |||||||| |||||||  |||||||    
T  1147013 tgtgtttgaatgagggaatattttgagctaatgtaattttttgagaaaattcaa 1146960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 48947605 - 48947662
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    ||||||||||||||||   |||| |||||||| |||||| ||||||||| ||||||||    
T  48947605 agagtgtgtttggatggaagaatgttttgagggaatgtattgttttgagagaattcaa 48947662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 19475824 - 19475884
Alignment:
Q  178 tttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    ||||||||  ||||| |||||||| ||||||||||| ||||| ||||||| || |||||||    
T  19475824 tttggatggaggaatgttttgagggaatgtaatgttatgaggtaattcaaatactttgagg 19475884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 4e-25; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 40264187 - 40264121
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  40264187 agtgtgtttggatgggggaatattttgaggtaatgtaatgttttgagggaattcaattattttgagg 40264121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 38277571 - 38277506
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  38277571 agtgtgtttggatg-gggaatattttgaggtaatgtaatgttttgagggaattcaattattttgagg 38277506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 50005236 - 50005170
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    ||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  50005236 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgagggaattcaattattttgagg 50005170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 171 - 238
Target Start/End: Complemental strand, 32573080 - 32573013
Alignment:
Q  171 gagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    ||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  32573080 gagtgtgattggatgggggaatattttgaggtaatgtaatgttttgagggaattcaattcttttgagg 32573013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 34756584 - 34756518
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||| || |||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  34756584 agtgtgtttggatggggaaatattttgaggtaatataatgttttgagggaattcaattattttgagg 34756518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 15034818 - 15034750
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||| || |||||||    
T  15034818 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagg 15034750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 23536067 - 23536135
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||| || |||||||    
T  23536067 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagg 23536135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 30190295 - 30190227
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||| ||||||| ||||||||||    
T  30190295 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggtaattcaactattttgagg 30190227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 38277415 - 38277483
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||| || |||||||    
T  38277415 agagtgtgtttggatgagagaatattttgagggaatgtaatgttttgaaggaattcaactactttgagg 38277483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 170 - 234
Target Start/End: Complemental strand, 44410470 - 44410406
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattatttt 234  Q
    |||||||||||||||  ||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  44410470 agagtgtgtttggattggggaatattttgaggtaatgtaaagttttgagggaattcaattatttt 44410406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 173 - 236
Target Start/End: Complemental strand, 37037019 - 37036956
Alignment:
Q  173 gtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttga 236  Q
    |||||||||||||||||||| |||||||  ||||||||||||||||||||||||| ||||||||    
T  37037019 gtgtgtttggatgagggaatgttttgagtgaatgtaatgttttgagggaattcaaatattttga 37036956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 170 - 224
Target Start/End: Original strand, 8224768 - 8224822
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaatt 224  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  8224768 agagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaatt 8224822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 4038234 - 4038177
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||    
T  4038234 agagtgtgtttggatgggggaatattttgagggaaagtaatgttttgagggaattcaa 4038177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 172 - 233
Target Start/End: Original strand, 28745799 - 28745860
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattt 233  Q
    ||||| |||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||    
T  28745799 agtgtatttggatgggggaatattttgagggaatgtaatggtttgagggaattcaattattt 28745860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 4038075 - 4038143
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    ||||||||||||| || |||||| |||||||| ||||||||||||||||||||||||| || |||||||    
T  4038075 agagtgtgtttgggtgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagg 4038143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 24273293 - 24273225
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||||| |||||| |||||||| ||||||||||| ||||||||||||| || |||||||    
T  24273293 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgagg 24273225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 25889158 - 25889225
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    ||||||| || ||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  25889158 agagtgtattgggatgagggaatattttgaggtaat-taatgttttgaaggaattcaattattttgagg 25889225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 174 - 238
Target Start/End: Original strand, 27804269 - 27804333
Alignment:
Q  174 tgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||| |||||| |||||||| |||||||| |||||||||||||||| ||||||||||    
T  27804269 tgtgtttggatgggggaatgttttgagggaatgtaatattttgagggaattcaactattttgagg 27804333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 34756427 - 34756495
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||| ||||||||||| |||||| |||||||| ||||||||||||||||||||||||| || |||||||    
T  34756427 agagagtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagg 34756495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 175 - 238
Target Start/End: Complemental strand, 28745950 - 28745887
Alignment:
Q  175 gtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    ||||||||||||| ||||||||| ||| |||||||| |||||||||||||||| ||||||||||    
T  28745950 gtgtttggatgagagaatattttaagggaatgtaatattttgagggaattcaactattttgagg 28745887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 237
Target Start/End: Original strand, 31166310 - 31166377
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgag 237  Q
    ||||||||||||||||||||||| |||||||  ||||||||||||||| ||||| ||| |||||||||    
T  31166310 agagtgtgtttggatgagggaatgttttgagataatgtaatgttttgatggaatgcaaatattttgag 31166377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 170 - 236
Target Start/End: Complemental strand, 26501152 - 26501086
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttga 236  Q
    ||||||||||||||||  ||||| |||||||| ||||||||||||||||||||||||| || |||||    
T  26501152 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaaatactttga 26501086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 15034659 - 15034716
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||||||||||||||||    
T  15034659 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaa 15034716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 234
Target Start/End: Original strand, 45565397 - 45565458
Alignment:
Q  173 gtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattatttt 234  Q
    ||||||||||||| |||||| |||||||  ||||||||||||||||||||||||| ||||||    
T  45565397 gtgtgtttggatgggggaatgttttgagagaatgtaatgttttgagggaattcaactatttt 45565458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 50005079 - 50005136
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    ||||||||||||||||| |||||||||||||  |||||||||||||||| ||||||||    
T  50005079 agagtgtgtttggatgacggaatattttgagagaatgtaatgttttgagcgaattcaa 50005136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 28632656 - 28632600
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaat 228  Q
    ||||||||||||||||||||| ||| |||| |||||||||||||||| |||||||||    
T  28632656 agtgtgtttggatgagggaatgtttggagggaatgtaatgttttgagagaattcaat 28632600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 27935644 - 27935577
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgag 237  Q
    ||||||||||||||||  | |||||||||||| ||||||||||||||||| ||||||| || ||||||    
T  27935644 agagtgtgtttggatggagaaatattttgagggaatgtaatgttttgaggaaattcaactactttgag 27935577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 6470759 - 6470702
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    ||||||||||||||||  ||||| |||||||  |||||||||||||||||||||||||    
T  6470759 agagtgtgtttggatggcggaatgttttgagagaatgtaatgttttgagggaattcaa 6470702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 47165285 - 47165228
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    ||||||||||||||||  | ||| |||||||| |||||||||||||||||||||||||    
T  47165285 agagtgtgtttggatggagaaatgttttgaggaaatgtaatgttttgagggaattcaa 47165228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 194 - 238
Target Start/End: Original strand, 37214843 - 37214887
Alignment:
Q  194 ttttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||| |||||||||||||||| |||||||||||||||||||    
T  37214843 ttttgaggtaatgtaatgttttgagagaattcaattattttgagg 37214887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 44410311 - 44410379
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    ||||||| |||||||| | |||| |||||||| ||||||||||||| || |||||||| ||||||||||    
T  44410311 agagtgtatttggatgggagaatgttttgagggaatgtaatgttttaagcgaattcaactattttgagg 44410379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 233
Target Start/End: Original strand, 29446750 - 29446813
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattt 233  Q
    |||||||||||| | | |||||| |||||| | ||||||||||||||||||||||||| |||||    
T  29446750 agagtgtgtttgaacgggggaatgttttgaaggaatgtaatgttttgagggaattcaactattt 29446813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 236
Target Start/End: Complemental strand, 32288006 - 32287940
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttga 236  Q
    ||||||||||||||||  ||||  |||||||| ||||||||||||||||| ||||||| || |||||    
T  32288006 agagtgtgtttggatggaggaaagttttgagggaatgtaatgttttgaggaaattcaaatactttga 32287940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 34003379 - 34003445
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||||| ||||||||| | ||||| |||| ||||||||| |||||| || |||||||    
T  34003379 agtgtgtttggatgagtgaatattttaaagcaatataatattttgagggcattcaaatactttgagg 34003445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 10166499 - 10166556
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||||| |||| ||||| || ||||||||||||||| |||| ||||    
T  10166499 agagtgtgtttggatgagagaatgttttgtggtaatgtaatgttttgaaggaactcaa 10166556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 27804424 - 27804367
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||| || |||||||||    
T  27804424 agagtgtgtttggatggaggaatgttttgaggaaatgtaatgtttagaaggaattcaa 27804367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 37448465 - 37448420
Alignment:
Q  179 ttggatgagggaatattttgaggcaatgtaatgttttgagggaatt 224  Q
    |||||||||||||| |||||||  ||||||||||||||||||||||    
T  37448465 ttggatgagggaatgttttgagagaatgtaatgttttgagggaatt 37448420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 218
Target Start/End: Complemental strand, 43623051 - 43623003
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgag 218  Q
    |||||||||||||||| |||||| |||||| | ||||||||||||||||    
T  43623051 agagtgtgtttggatgggggaatgttttgatggaatgtaatgttttgag 43623003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 200
Target Start/End: Original strand, 17502198 - 17502228
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgag 200  Q
    |||||||||||||||||||||||||||||||    
T  17502198 agagtgtgtttggatgagggaatattttgag 17502228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 238
Target Start/End: Original strand, 31195474 - 31195524
Alignment:
Q  188 ggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||| ||||||||||| ||||| |||| || ||||||||||    
T  31195474 ggaatattttgagggaatgtaatgttctgaggaaatttaaatattttgagg 31195524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 227
Target Start/End: Complemental strand, 37447968 - 37447918
Alignment:
Q  177 gtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    ||||||||  |||||||||| |||| ||||||||||||||| |||||||||    
T  37447968 gtttggataggggaatatttggagggaatgtaatgttttgaaggaattcaa 37447918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 44570687 - 44570735
Alignment:
Q  179 ttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    ||||||| | |||| |||||||| ||||||||||||||| |||||||||    
T  44570687 ttggatgggagaatgttttgagggaatgtaatgttttgaaggaattcaa 44570735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 49659217 - 49659284
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||||| |||||| | |||||| |||||||||||  ||||||||| || || |||||||    
T  49659217 agagtgtgtttggatg-gggaatgtattgagggaatgtaatgttacgagggaatttaaatactttgagg 49659284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 2e-23; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 170 - 237
Target Start/End: Original strand, 17180297 - 17180364
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgag 237  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||    
T  17180297 agagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattcaactattttgag 17180364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 41461674 - 41461606
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||| ||||||||||    
T  41461674 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactattttgagg 41461606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 41461517 - 41461583
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||| || |||||||||||| |||||||||||||||||||||| |||||||||||||    
T  41461517 agtgtgtttggatggggaaatattttgaggtaatgtaatgttttgagggaatttaattattttgagg 41461583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 14365700 - 14365768
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||| || |||||||    
T  14365700 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagg 14365768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 11532324 - 11532258
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||| |||||||||| |||| ||||||||||||||||||||||||| || |||||||    
T  11532324 agtgtgtttggatgggggaatatttggagggaatgtaatgttttgagggaattcaaatactttgagg 11532258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 11793897 - 11793963
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||| || |||||||    
T  11793897 agtgtgtttggatgggggaatattttgagggaatgtaatgttatgagggaattcaaatactttgagg 11793963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 44256263 - 44256198
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||| |||||||||| |||| ||||||||||||||||||||||| ||||||||||||    
T  44256263 agtgtgtttggatgggggaatattt-gaggtaatgtaatgttttgagggaattcgattattttgagg 44256198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 784952 - 784895
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||    
T  784952 agagtgtgtttggatgggggaatattttgatggaatgtaatgttttgagggaattcaa 784895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 14537199 - 14537267
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||| ||||||| || |||||||    
T  14537199 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggtaattcaactactttgagg 14537267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 27033490 - 27033558
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||||| |||||| |||||||  ||||||||||||||||||||||||| || |||||||    
T  27033490 agagtgtgtttggatgggggaatgttttgagagaatgtaatgttttgagggaattcaactactttgagg 27033558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 11684603 - 11684656
Alignment:
Q  174 tgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||| |||||| |||||||| |||||||||||||||||||||||||    
T  11684603 tgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaa 11684656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 14365858 - 14365801
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||||||||||||||||    
T  14365858 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaa 14365801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 10480119 - 10480187
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||||| |||||| |||||||| |||||||||||  |||||||||||| || |||||||    
T  10480119 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttacgagggaattcaaatactttgagg 10480187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 11716408 - 11716476
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    ||||||||||||||||   |||| |||||||| ||||||||||||||||||||||||| || |||||||    
T  11716408 agagtgtgtttggatggaagaatgttttgagggaatgtaatgttttgagggaattcaactactttgagg 11716476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 17905654 - 17905722
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||| |||||||||||| |||||||  ||||||||||||| | ||||||||| ||||||||||    
T  17905654 agagtgtgttaggatgagggaatgttttgagagaatgtaatgttttaaaggaattcaaatattttgagg 17905722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 224
Target Start/End: Complemental strand, 45094544 - 45094490
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaatt 224  Q
    |||||||||||| |||||||||| |||||||| ||| ||||||||||||||||||    
T  45094544 agagtgtgtttgaatgagggaatgttttgagggaatataatgttttgagggaatt 45094490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 769036 - 769093
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| |||||| |||||||| |||||| |||||| |||||||||||    
T  769036 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaa 769093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 1583882 - 1583825
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| |||||| |||||||| |||||| |||||| |||||||||||    
T  1583882 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaa 1583825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 10244177 - 10244234
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| | ||||||| ||||| || ||||||||||||||||||||||    
T  10244177 agagtgtgtttggatgggagaatattctgagggaaagtaatgttttgagggaattcaa 10244234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 11141305 - 11141362
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| |||||| |||||||| |||||| |||||| |||||||||||    
T  11141305 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaa 11141362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 227
Target Start/End: Complemental strand, 11716550 - 11716501
Alignment:
Q  178 tttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||| |||||| |||||||| |||||||||||||||||||||||||    
T  11716550 tttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaa 11716501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 33189330 - 33189273
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| |||||| |||||||| |||||| |||||| |||||||||||    
T  33189330 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaa 33189273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 35047752 - 35047695
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| |||||| |||||||| |||||| |||||| |||||||||||    
T  35047752 agagtgtgtttggatgggggaatgttttgaggaaatgtattgttttaagggaattcaa 35047695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 13017779 - 13017847
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||||| || ||| |||||||| |||||||| |||| ||||||||||| || |||||||    
T  13017779 agagtgtgtttggatgtggaaatgttttgagggaatgtaatattttaagggaattcaaatactttgagg 13017847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 236
Target Start/End: Original strand, 28740599 - 28740662
Alignment:
Q  173 gtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttga 236  Q
    ||||||||| ||| || ||| |||||||| ||||||||||||||||||||||||| || |||||    
T  28740599 gtgtgtttgaatggggaaatgttttgagggaatgtaatgttttgagggaattcaaatactttga 28740662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 233
Target Start/End: Complemental strand, 30751418 - 30751356
Alignment:
Q  171 gagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattt 233  Q
    ||||||||||||||||| |||| |||||||  |||||||||||||||| ||||| || |||||    
T  30751418 gagtgtgtttggatgagagaatgttttgagataatgtaatgttttgagtgaatttaaatattt 30751356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 30698289 - 30698338
Alignment:
Q  178 tttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||| |||||| |||||||| ||||||||||||||| |||||||||    
T  30698289 tttggatgggggaatgttttgagggaatgtaatgttttgaaggaattcaa 30698338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 233
Target Start/End: Original strand, 39630225 - 39630288
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattt 233  Q
    |||||||||||| |||  | ||| |||||||| |||||| |||||||||||||||||| |||||    
T  39630225 agagtgtgtttgaatggagaaatgttttgagggaatgtattgttttgagggaattcaaatattt 39630288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 224
Target Start/End: Complemental strand, 7228085 - 7228031
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaatt 224  Q
    |||||||||||||||| || ||| |||||||  ||||||||||||||| ||||||    
T  7228085 agagtgtgtttggatggggaaatgttttgagagaatgtaatgttttgaaggaatt 7228031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 238
Target Start/End: Original strand, 40026070 - 40026132
Alignment:
Q  176 tgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||| ||| ||||||||||||||| ||| ||||||||||||| |||| || || |||||||    
T  40026070 tgtttgaatgggggaatattttgaggtaatataatgttttgaggaaatttaaatactttgagg 40026132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 11981629 - 11981580
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagg 219  Q
    |||||||||||||||||  |||||||||  || |||||||||||||||||    
T  11981629 agagtgtgtttggatgaaagaatattttagggtaatgtaatgttttgagg 11981580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 238
Target Start/End: Original strand, 11595355 - 11595387
Alignment:
Q  206 gtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||||||||||| ||||||||||    
T  11595355 gtaatgttttgagggaattcaaatattttgagg 11595387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 13404829 - 13404895
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13404829 agtgtgtttggatggggaaatattttgaggtaatgtaatgttttgagggaattcaattattttgagg 13404895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 37268166 - 37268098
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||||  ||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  37268166 agagtgtgtttggataggggaatattttgaggtaatgtaatgttttgagggaatttaattattttgagg 37268098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 3853773 - 3853707
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||| || |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  3853773 agtgtgtttggatggggaaatattttgaggtaatgtaatgtttggagggaattcaattattttgagg 3853707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 3858231 - 3858165
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||| || |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  3858231 agtgtgtttggatggggaaatattttgaggtaatgtaatgtttggagggaattcaattattttgagg 3858165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 14800119 - 14800062
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||    
T  14800119 agagtgtgtttggatgggggaatattttgagggaaagtaatgttttgagggaattcaa 14800062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 24044960 - 24045017
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||    
T  24044960 agagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgaaggaattcaa 24045017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 3853616 - 3853684
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||| ||||||| || |||||||    
T  3853616 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgagg 3853684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 3858074 - 3858142
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||| ||||||| || |||||||    
T  3858074 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgagg 3858142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 4156324 - 4156269
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||| | ||||||||||||| |||||||||||||||||||||||||    
T  4156324 agtgtgtttggatgggagaatattttgagggaatgtaatgttttgagggaattcaa 4156269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 237
Target Start/End: Original strand, 17110869 - 17110936
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgag 237  Q
    |||||||||||||||| || ||| |||||||| ||||||||||||||||||||||||| || ||||||    
T  17110869 agagtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaattcaactactttgag 17110936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 233
Target Start/End: Original strand, 31807409 - 31807471
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattt 233  Q
    |||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||| |||||    
T  31807409 agagtgtgtttggatgagagaatgttttgagg-aatgtaatgttttgagggaattcaactattt 31807471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 187 - 238
Target Start/End: Complemental strand, 40046932 - 40046881
Alignment:
Q  187 gggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  40046932 gggaatgttttgaggtaatgtaatgttttgagggaattcaattattttgagg 40046881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 42711439 - 42711372
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgag 237  Q
    |||||||||||||||  |||||| |||||||| ||||||||||||||||||||||||| || ||||||    
T  42711439 agagtgtgtttggattggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgag 42711372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 170 - 228
Target Start/End: Original strand, 14991692 - 14991750
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaat 228  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||| ||||||||    
T  14991692 agagtgtgtttggatgggggaatgttttgaggtaatgtaatgttttgaggcaattcaat 14991750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 33902667 - 33902724
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    ||||||||||||||||  ||||| |||||||| |||||||||||||||||||||||||    
T  33902667 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaa 33902724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 237
Target Start/End: Original strand, 40046804 - 40046871
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgag 237  Q
    ||||||||||||||||   |||| |||||||| ||||||||||||||||||||||||| || ||||||    
T  40046804 agagtgtgtttggatggatgaatgttttgagggaatgtaatgttttgagggaattcaactactttgag 40046871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 236
Target Start/End: Original strand, 44889354 - 44889420
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttga 236  Q
    ||||||||||||||||  ||||| |||||||| ||| ||||||||||||||||||||| || |||||    
T  44889354 agagtgtgtttggatggaggaatgttttgagggaatataatgttttgagggaattcaaatactttga 44889420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 11744802 - 11744745
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||||| |||||||| |||| ||||||||||| ||| |||||||||    
T  11744802 agagtgtgtttggatgagagaatatttagagggaatgtaatgttgtgaaggaattcaa 11744745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 17111028 - 17110971
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    ||||||||||||||||  | ||| |||||||| |||||||||||||||||||||||||    
T  17111028 agagtgtgtttggatggagaaatgttttgagggaatgtaatgttttgagggaattcaa 17110971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 28324745 - 28324688
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    ||||||||||||||||  ||||| |||||||| ||||||||||||||| |||||||||    
T  28324745 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaaggaattcaa 28324688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 29257434 - 29257377
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| |||||| |||||||| |||||| |||||| |||||||||||    
T  29257434 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaa 29257377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 33377380 - 33377323
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| |||||| |||||||| ||| || ||||||||||||||||||    
T  33377380 agagtgtgtttggatgggggaatgttttgagggaatatattgttttgagggaattcaa 33377323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 23011734 - 23011802
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||| | | |||| |||||||| ||||||||||| ||||||||||||| || |||||||    
T  23011734 agagtgtgtttggacgggagaatgttttgagggaatgtaatgttatgagggaattcaaatactttgagg 23011802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 33986004 - 33986072
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||||| |||||| | |||| | |||||||||||||||| |||||||| || |||||||    
T  33986004 agagtgtgtttggatgggggaatgtcttgaagtaatgtaatgttttgagagaattcaaatactttgagg 33986072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 29482888 - 29482833
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||| |||||| |||||||| || ||| ||||||||||||||||||    
T  29482888 agtgtgtttggatgggggaatgttttgagggaacgtattgttttgagggaattcaa 29482833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 187 - 237
Target Start/End: Complemental strand, 13404969 - 13404919
Alignment:
Q  187 gggaatattttgaggcaatgtaatgttttgagggaattcaattattttgag 237  Q
    |||||| |||||||| ||||||||||||||||||||||||| || ||||||    
T  13404969 gggaatgttttgagggaatgtaatgttttgagggaattcaactactttgag 13404919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 236
Target Start/End: Original strand, 36103101 - 36103167
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttga 236  Q
    ||||||||||||||||  ||||| |||||||| ||||||||||||| ||| ||||||| || |||||    
T  36103101 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttaaggaaattcaaatactttga 36103167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 14239 - 14295
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| |||||| ||| |||| ||||||||||||| |||||||||||    
T  14239 agagtgtgtttggatg-gggaatgtttggagggaatgtaatgttttaagggaattcaa 14295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 44346757 - 44346704
Alignment:
Q  174 tgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||| |||||| |||||||| |||||| |||||| |||||||||||    
T  44346757 tgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaa 44346704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 218
Target Start/End: Complemental strand, 32626117 - 32626069
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgag 218  Q
    |||||||| ||||||| |||||| |||||||| ||||||||||||||||    
T  32626117 agagtgtgcttggatgggggaatcttttgagggaatgtaatgttttgag 32626069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 238
Target Start/End: Original strand, 8049271 - 8049322
Alignment:
Q  187 gggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||| |||||||| ||| ||||||||||||||||||||| || |||||||    
T  8049271 gggaatgttttgagggaatataatgttttgagggaattcaaatactttgagg 8049322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 236
Target Start/End: Complemental strand, 515615 - 515549
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttga 236  Q
    ||||||||||||||||  ||||| |||||| | ||||||||||||| ||||| ||||| || |||||    
T  515615 agagtgtgtttggatggaggaatgttttgaaggaatgtaatgttttaagggagttcaaatactttga 515549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 1088360 - 1088295
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttg 235  Q
    ||||||||||||| ||  ||||| |||||||  |||||| |||||||||| ||||||| |||||||    
T  1088360 agagtgtgtttgggtggaggaatgttttgagagaatgtattgttttgaggaaattcaaatattttg 1088295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 215
Target Start/End: Complemental strand, 27322732 - 27322687
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgtttt 215  Q
    |||||||||||||||| | |||| |||||||| |||||||||||||    
T  27322732 agagtgtgtttggatgggagaatgttttgagggaatgtaatgtttt 27322687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 238
Target Start/End: Complemental strand, 35979084 - 35979019
Alignment:
Q  173 gtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||  ||||| |||||||| |||||||| ||  |||||||||||| || |||||||    
T  35979084 gtgtgtttggatggaggaatgttttgagggaatgtaatcttaagagggaattcaaatactttgagg 35979019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 9982637 - 9982704
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||| ||||||||||| | |||| |||| ||| |||||||||||||||| ||||| || ||||||||||    
T  9982637 agagcgtgtttggatg-gagaatgttttaaggtaatgtaatgttttgagagaatttaaatattttgagg 9982704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 28828504 - 28828438
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  28828504 agtgtgtttggatggggaaatattttgaggtaatgtaatgttttgagggaattcaattattttgagg 28828438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 37722964 - 37722896
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| || |||||||    
T  37722964 agagtgtgtttggatgggggaatattttgagggaatgtaatgttttgagggaattcaaatactttgagg 37722896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 170 - 233
Target Start/End: Original strand, 6634015 - 6634078
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattt 233  Q
    |||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||    
T  6634015 agagtgtgtttggatggggggatattttgaggtaatgtaatgttttgagggaattcaattattt 6634078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 170 - 233
Target Start/End: Complemental strand, 40643976 - 40643913
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattt 233  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||| |||||    
T  40643976 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactattt 40643913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 2721628 - 2721562
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||| |||||| |||||||| ||||||||||||||||||||||||| || |||||||    
T  2721628 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagg 2721562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 9764338 - 9764395
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||    
T  9764338 agagtgtgtttggatgggggaatattttgagggaaagtaatgttttgagggaattcaa 9764395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 15374119 - 15374062
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||    
T  15374119 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaa 15374062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 168 - 237
Target Start/End: Original strand, 15804320 - 15804389
Alignment:
Q  168 tgagagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgag 237  Q
    |||||||||||||||||| |||||| |||||||| |||||| |||||||||||||||||| || ||||||    
T  15804320 tgagagtgtgtttggatgggggaatgttttgagggaatgtagtgttttgagggaattcaactactttgag 15804389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 9764497 - 9764429
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||||| |||||| ||| |||| ||||||||||||||||||||||||| || |||||||    
T  9764497 agagtgtgtttggatgggggaatgtttcgagggaatgtaatgttttgagggaattcaactactttgagg 9764429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 32390131 - 32390063
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    ||||||||||||||| || |||| |||||||| ||||||||||||||||||||||||| || |||||||    
T  32390131 agagtgtgtttggattagagaattttttgagggaatgtaatgttttgagggaattcaactactttgagg 32390063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 40090484 - 40090416
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||| ||||||||| || |||||||    
T  40090484 agagtgtgtttggatgggggaatgttttgaggaaatgtaatgttttgatggaattcaaatactttgagg 40090416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 2316378 - 2316435
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| |||||| |||||||| |||||||| ||||||||||||||||    
T  2316378 agagtgtgtttggatgggggaatgttttgagggaatgtaatattttgagggaattcaa 2316435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 16515177 - 16515120
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||||| |||| |||| ||| |||||||||||||||||||||||||    
T  16515177 agagtgtgtttggatgagagaatgtttttagggaatgtaatgttttgagggaattcaa 16515120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 22303940 - 22303883
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||| |||||||||    
T  22303940 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaaggaattcaa 22303883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 22766952 - 22767009
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| |||||| |||||||| ||| |||||||||||||||||||||    
T  22766952 agagtgtgtttggatgggggaatgttttgagggaatataatgttttgagggaattcaa 22767009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 26281339 - 26281282
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| |||||  |||||||| |||||||||||||||||||||||||    
T  26281339 agagtgtgtttggatgggggaacgttttgagggaatgtaatgttttgagggaattcaa 26281282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 172 - 225
Target Start/End: Original strand, 28828369 - 28828422
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattc 225  Q
    |||||||||||||| |||||| |||||||| |||||||||||||||||||||||    
T  28828369 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 28828422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 227
Target Start/End: Original strand, 3563278 - 3563334
Alignment:
Q  171 gagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    ||||||||||||||  |||||| |||||||| |||||||||||||||||||||||||    
T  3563278 gagtgtgtttggataggggaatgttttgagggaatgtaatgttttgagggaattcaa 3563334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 15373960 - 15374028
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    ||||||||||||||||   |||| |||||||| ||||||||||||||||||||||||| || |||||||    
T  15373960 agagtgtgtttggatggaagaattttttgagggaatgtaatgttttgagggaattcaactactttgagg 15374028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 227
Target Start/End: Complemental strand, 20523291 - 20523235
Alignment:
Q  171 gagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    ||||||||||||||| |||||| |||||||  |||||||||||||||||||||||||    
T  20523291 gagtgtgtttggatgggggaatgttttgagagaatgtaatgttttgagggaattcaa 20523235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 25935360 - 25935292
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||||| |||||| |||||||| ||||||||||| ||||| ||||||| || |||||||    
T  25935360 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgaggaaattcaaatactttgagg 25935292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 13243561 - 13243514
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagg 219  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||    
T  13243561 agtgtgtttggatgggggaatattttgaggtaatgtaatgttttgagg 13243514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 32389974 - 32390029
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    ||||||||||||||||||||| |||||| | |||||||| ||||||||||||||||    
T  32389974 agtgtgtttggatgagggaatgttttgaaggaatgtaatattttgagggaattcaa 32390029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 13243457 - 13243514
Alignment:
Q  170 agagtgtgtttg--gatgagggaatattttgaggcaatgtaatgttttgagggaattc 225  Q
    ||||||||||||  ||||||||||| |||||||| |||||||||||||||||||||||    
T  13243457 agagtgtgtttgtggatgagggaatgttttgagggaatgtaatgttttgagggaattc 13243514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 19533975 - 19533909
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    ||||||||||||||  ||||| |||||||| ||||||||||| ||||||||||||| || |||||||    
T  19533975 agtgtgtttggatggaggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgagg 19533909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 927302 - 927359
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| || ||| |||||||| |||||| ||||||||||||||||||    
T  927302 agagtgtgtttggatggggaaatgttttgagggaatgtattgttttgagggaattcaa 927359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 23091963 - 23092019
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    ||||||||||| |||| ||||||||||||||| ||||||||||||||| |||||||||    
T  23091963 agagtgtgttttgatg-gggaatattttgagggaatgtaatgttttgaaggaattcaa 23092019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 32250167 - 32250111
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| |||||| |||||||| || ||||||||||||||||||||||    
T  32250167 agagtgtgtttggatg-gggaatgttttgagggaaagtaatgttttgagggaattcaa 32250111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 35379344 - 35379400
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| |||||| |||||||  |||||||||||||||||||||||||    
T  35379344 agagtgtgtttggatg-gggaatgttttgagataatgtaatgttttgagggaattcaa 35379400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 41762285 - 41762228
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| |||||| |||||||| |||||| |||||| |||||||||||    
T  41762285 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaa 41762228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 172 - 224
Target Start/End: Complemental strand, 15804451 - 15804399
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaatt 224  Q
    |||||||||||||| || ||| |||||||| ||||||||||||||||||||||    
T  15804451 agtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaatt 15804399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 20523133 - 20523201
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||||| | |||| |||||||| |||||||| || ||||||||||||| || |||||||    
T  20523133 agagtgtgtttggatgggagaatgttttgagggaatgtaatattctgagggaattcaactactttgagg 20523201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 237
Target Start/End: Original strand, 40809341 - 40809408
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgag 237  Q
    |||||||||||||||| || ||| |||||||  ||| ||||||||||||||||||||| || ||||||    
T  40809341 agagtgtgtttggatggggaaatgttttgagagaatataatgttttgagggaattcaactactttgag 40809408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 37145569 - 37145503
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||| ||||||||| |||||| |||||||| ||||||||||| |||| |||||||| || |||||||    
T  37145569 agtgggtttggatgggggaatgttttgagggaatgtaatgttatgagagaattcaaatactttgagg 37145503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 23092121 - 23092064
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| |||||| ||||||   ||||||||||||||||||| |||||    
T  23092121 agagtgtgtttggatgggggaatgttttgaacgaatgtaatgttttgagggagttcaa 23092064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 34982216 - 34982272
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||  |||||| |||||||| ||||| |||||||||||||||||||    
T  34982216 agagtgtgtttggataggggaatgttttgagggaatgt-atgttttgagggaattcaa 34982272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 2316537 - 2316470
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||||| |  ||| |||||||| |||||||||||||||| |||||||| || |||||||    
T  2316537 agagtgtgtttggatg-gaaaatgttttgagggaatgtaatgttttgagagaattcaactactttgagg 2316470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 9894388 - 9894324
Alignment:
Q  174 tgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||| |||||| |||||||| |||||||||||   ||||||||||| || |||||||    
T  9894388 tgtgtttggatgggggaatgttttgagggaatgtaatgttaccagggaattcaaatactttgagg 9894324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 234
Target Start/End: Original strand, 32470882 - 32470946
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattatttt 234  Q
    ||||||| ||||||||  | ||| |||||||| ||||||||||||||| ||||||||| ||||||    
T  32470882 agagtgtatttggatggagaaatgttttgagggaatgtaatgttttgaaggaattcaactatttt 32470946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 32471039 - 32470974
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgag 237  Q
    |||||||||||||||| || ||| ||  |||| ||||||||||||||||||||||||| || ||||||    
T  32471039 agagtgtgtttggatgtggaaatctt--gagggaatgtaatgttttgagggaattcaactactttgag 32470974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 227
Target Start/End: Complemental strand, 33245441 - 33245385
Alignment:
Q  171 gagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    ||||||||||||||| |||||| |||||| | ||||||||||||||||  |||||||    
T  33245441 gagtgtgtttggatgggggaatgttttgatggaatgtaatgttttgagaaaattcaa 33245385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 234
Target Start/End: Original strand, 8255045 - 8255091
Alignment:
Q  188 ggaatattttgaggcaatgtaatgttttgagggaattcaattatttt 234  Q
    |||||| ||| ||| ||||||||||||||||||||||||| ||||||    
T  8255045 ggaatactttaaggtaatgtaatgttttgagggaattcaaatatttt 8255091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 12991374 - 12991333
Alignment:
Q  178 tttggatgagggaatattttgaggcaatgtaatgttttgagg 219  Q
    ||||||||||||||| |||||||| || ||||||||||||||    
T  12991374 tttggatgagggaatgttttgaggtaaagtaatgttttgagg 12991333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 16515009 - 16515061
Alignment:
Q  174 tgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||| | |||| |||||||| ||||||| |||||||||||||||||    
T  16515009 tgtgtttggatg-gagaatgttttgagggaatgtaaggttttgagggaattcaa 16515061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 11601040 - 11601107
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||| |||| | |||||||| ||| ||| ||||||||||| ||||||||| || |||||||    
T  11601040 agagtgtgtttgaatgatg-aatattttaaggtaatataatgttttgaaggaattcaaataatttgagg 11601107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 226
Target Start/End: Complemental strand, 40809500 - 40809444
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattca 226  Q
    ||||||||||| |||| || ||| |||||||  |||||||||||||||| |||||||    
T  40809500 agagtgtgtttagatggggaaatgttttgagagaatgtaatgttttgagtgaattca 40809444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 5644836 - 5644768
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||||| |||||  |||||||| ||||||||||||||||||||||||||||||||||||    
T  5644836 agagtgtgtttggatgggggaacgttttgaggtaatgtaatgttttgagggaattcaattattttgagg 5644768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 21635885 - 21635953
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||| ||||||| | ||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  21635885 agagtgtgcttggatgggagaatattttgaggtaatgtaatgttttgaggggattcaattattttgagg 21635953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 29065978 - 29065910
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    ||||||||||||||||  ||||| |||| ||| ||||||||||||||||||||||||||||||||||||    
T  29065978 agagtgtgtttggatggaggaatgttttaaggtaatgtaatgttttgagggaattcaattattttgagg 29065910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 35777014 - 35776946
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    ||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||| || |||||||    
T  35777014 agagtgtgtttggatgagggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgagg 35776946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 2057554 - 2057497
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||    
T  2057554 agagtgtgtttggatgggggaatattttgagggaaagtaatgttttgagggaattcaa 2057497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 40110737 - 40110794
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||    
T  40110737 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaa 40110794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 43955517 - 43955574
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||    
T  43955517 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaa 43955574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 2057395 - 2057463
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||||| |||||| |||||||  ||||||||||||||||||||||||| || |||||||    
T  2057395 agagtgtgtttggatgggggaatgttttgagcgaatgtaatgttttgagggaattcaactactttgagg 2057463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 26162196 - 26162128
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||||| |||||| |||||||| ||||||||||| ||||||||||||| || |||||||    
T  26162196 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgagg 26162128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 31632722 - 31632790
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||||| |||||| |||||||| ||||||||||| ||||||||||||| || |||||||    
T  31632722 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgagg 31632790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 43955671 - 43955616
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||| |||||| |||||||| |||||||||||||||||||||||||    
T  43955671 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaa 43955616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 170 - 236
Target Start/End: Complemental strand, 6498824 - 6498758
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttga 236  Q
    ||||||||||||||||  ||||| |||||||| ||||||||||||||||||||||||| || |||||    
T  6498824 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaaatactttga 6498758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 170 - 236
Target Start/End: Complemental strand, 25189285 - 25189219
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttga 236  Q
    |||||||||||||||| |||||| |||||||| |||| |||||||||||||||||||| || |||||    
T  25189285 agagtgtgtttggatgtgggaatgttttgaggtaatgcaatgttttgagggaattcaaatactttga 25189219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 23455302 - 23455249
Alignment:
Q  174 tgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    ||||||||||||||||||| |||||||| |||||| ||||||||||||||||||    
T  23455302 tgtgtttggatgagggaatgttttgagggaatgtattgttttgagggaattcaa 23455249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 28539227 - 28539170
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| |||||| |||||||| |||||| ||||||||||||||||||    
T  28539227 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttgagggaattcaa 28539170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 34399008 - 34398939
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagg-gaattcaattattttgagg 238  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||| |||||||| || |||||||    
T  34399008 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggtgaattcaactactttgagg 34398939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 5644677 - 5644745
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||| |||  ||||| |||||||| ||||||||||||||||||||||||| || |||||||    
T  5644677 agagtgtgtttgaatggaggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagg 5644745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 29065819 - 29065887
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    ||||||||||||||||   |||| |||||||| ||||||||||||||||||||||||| || |||||||    
T  29065819 agagtgtgtttggatggatgaatgttttgagggaatgtaatgttttgagggaattcaactactttgagg 29065887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 34388424 - 34388356
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||| |||| ||||| |||||||| |||||||| |||||||||||||||| || |||||||    
T  34388424 agagtgtgtttgaatgatggaatgttttgagggaatgtaatattttgagggaattcaactactttgagg 34388356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 40110897 - 40110829
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||||| || ||| ||| |||| ||||||||||||||||||||||||| || |||||||    
T  40110897 agagtgtgtttggatggggaaatgtttcgagggaatgtaatgttttgagggaattcaactactttgagg 40110829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 44915195 - 44915263
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||||||| |||| |||||||| || |||||||||||| ||||||||| || |||||||    
T  44915195 agagtgtgtttggatgagagaattttttgagggaacgtaatgttttgaaggaattcaactactttgagg 44915263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 237
Target Start/End: Complemental strand, 46069545 - 46069483
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgag 237  Q
    |||||||||||||| |||||||||| |||| |||||||||||  ||||||||||||||||||||||    
T  46069545 agtgtgtttggatgggggaatattt-gaggtaatgtaatgtt--gagggaattcaattattttgag 46069483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 14603321 - 14603264
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| |||||| |||||||| |||||| |||||| |||||||||||    
T  14603321 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaa 14603264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 35455804 - 35455861
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| |||||| |||||||| |||||| |||||| |||||||||||    
T  35455804 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaa 35455861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 39342701 - 39342644
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| |||||| |||||||| |||||| |||||| |||||||||||    
T  39342701 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaa 39342644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 227
Target Start/End: Complemental strand, 9784989 - 9784933
Alignment:
Q  171 gagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||  ||||| |||||||| |||||| ||||||||||||||||||    
T  9784989 gagtgtgtttggatggaggaatgttttgagggaatgtattgttttgagggaattcaa 9784933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 29639274 - 29639206
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    ||||||||| |||||| |||||| |||| ||| ||||||||||| ||||| ||||||| ||||||||||    
T  29639274 agagtgtgtatggatgggggaatgttttcagggaatgtaatgttatgaggaaattcaaatattttgagg 29639206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 29195709 - 29195756
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga 217  Q
    ||||||||||||||||  |||||||||||||| |||||||||||||||    
T  29195709 agagtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 29195756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 237
Target Start/End: Original strand, 49052786 - 49052852
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgag 237  Q
    ||||||||||||||||||  ||| |||||||| |||||||||||||||| |||||||| || ||||||    
T  49052786 agagtgtgtttggatgagaaaatgttttgagg-aatgtaatgttttgagtgaattcaactactttgag 49052852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 22391644 - 22391578
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||| |||||  ||| |||||||| |||||||||||||||| ||||| || ||||||||||    
T  22391644 agtgtgtttgaatgagataatgttttgagggaatgtaatgttttgagagaatttaaatattttgagg 22391578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 18789305 - 18789248
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    ||||||||||||||||  |||||||||||||  ||| ||||||| |||||||||||||    
T  18789305 agagtgtgtttggatggaggaatattttgagagaatataatgttatgagggaattcaa 18789248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 23548670 - 23548613
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    ||||||||||||||||  ||||| |||||||| |||||| |||||||||| |||||||    
T  23548670 agagtgtgtttggatggaggaatgttttgagggaatgtattgttttgaggaaattcaa 23548613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 34388265 - 34388322
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| || |||||||||||| || |||||||| |||| ||||||||    
T  34388265 agagtgtgtttggatggggaaatattttgaggaaaagtaatgttctgagagaattcaa 34388322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 238
Target Start/End: Original strand, 43791116 - 43791158
Alignment:
Q  196 ttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||| ||||||||||||||||||||||||| || |||||||    
T  43791116 ttgagggaatgtaatgttttgagggaattcaaatactttgagg 43791158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 18926861 - 18926812
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgaggga 221  Q
    ||||||||| |||| ||| | ||||||||| |||||||||||||||||||    
T  18926861 agtgtgttttgatggggggacattttgaggtaatgtaatgttttgaggga 18926812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 201
Target Start/End: Complemental strand, 19865597 - 19865564
Alignment:
Q  168 tgagagtgtgtttggatgagggaatattttgagg 201  Q
    ||||||||||||||||||||||||| ||||||||    
T  19865597 tgagagtgtgtttggatgagggaatgttttgagg 19865564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 237
Target Start/End: Complemental strand, 21636038 - 21635977
Alignment:
Q  176 tgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgag 237  Q
    |||||||||| || ||| |||||||| ||||||||||||||| |||||| || || ||||||    
T  21636038 tgtttggatggggaaatgttttgagggaatgtaatgttttgaaggaatttaactactttgag 21635977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 30524255 - 30524312
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    ||||||||| ||||||  | ||| |||||| | |||||||||||||||||||||||||    
T  30524255 agagtgtgtatggatggagtaatgttttgaaggaatgtaatgttttgagggaattcaa 30524312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 22351922 - 22351874
Alignment:
Q  179 ttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    ||||||| |||||| ||||| || |||||||||||||||| ||||||||    
T  22351922 ttggatgggggaatgttttggggtaatgtaatgttttgagagaattcaa 22351874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 40854129 - 40854061
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttga-gggaattcaattattttgag 237  Q
    |||||||||||||||| || ||| || ||||| |||||||| |||||| |||||||||| || ||||||    
T  40854129 agagtgtgtttggatggggaaatgttctgagggaatgtaatattttgaggggaattcaactactttgag 40854061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 9763171 - 9763103
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    ||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  9763171 agagtgtgtttggatggaggaatattttgaggtaatgtaatgttttgagggaattcaattattgtgagg 9763103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 170 - 237
Target Start/End: Original strand, 9285647 - 9285714
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgag 237  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||| || ||||||    
T  9285647 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgag 9285714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 170 - 236
Target Start/End: Complemental strand, 34245053 - 34244987
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttga 236  Q
    ||||||||||||||||  ||||| |||||||| ||||||||||||||||||||||||| || |||||    
T  34245053 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaaatactttga 34244987  T

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Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 6919866 - 6919809
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| |||||| |||||||| || ||||||||||||||||||||||    
T  6919866 agagtgtgtttggatgggggaatgttttgagggaaagtaatgttttgagggaattcaa 6919809  T

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Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 6919710 - 6919776
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    ||||||||||||||  |||||  ||||||| ||||||||||||||||||||||||| || |||||||    
T  6919710 agtgtgtttggatggaggaatggtttgagggaatgtaatgttttgagggaattcaactactttgagg 6919776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 9763014 - 9763080
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||| | || ||| |||||||| ||||||||||||||||||||||||| || |||||||    
T  9763014 agtgtgtttggaaggggaaatgttttgagggaatgtaatgttttgagggaattcaactactttgagg 9763080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 236
Target Start/End: Complemental strand, 29889507 - 29889441
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttga 236  Q
    ||||||||||||||||  ||||| |||||| | ||||||||||||||||||||||||| || |||||    
T  29889507 agagtgtgtttggatggaggaatgttttgatggaatgtaatgttttgagggaattcaaatactttga 29889441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 8574695 - 8574752
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| || ||| |||||||  |||||||||||||||||||||||||    
T  8574695 agagtgtgtttggatggggaaatgttttgagtgaatgtaatgttttgagggaattcaa 8574752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 8574824 - 8574767
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| || ||| |||||||  |||||||||||||||||||||||||    
T  8574824 agagtgtgtttggatggggaaatgttttgagtgaatgtaatgttttgagggaattcaa 8574767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 13487275 - 13487343
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    ||||||||||| |||| |||||| |||||||| |||||| |||| ||||||||||||| || |||||||    
T  13487275 agagtgtgtttagatgggggaatgttttgagggaatgtagtgttatgagggaattcaaatactttgagg 13487343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 15299579 - 15299516
Alignment:
Q  174 tgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||| |||||| |||||||| ||||||||||||||| ||||||||| || |||||||    
T  15299579 tgtgtttggatg-gggaatgttttgagggaatgtaatgttttgaaggaattcaactactttgagg 15299516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 28918165 - 28918233
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    ||||||||||||||||  ||||| |||||||| ||||||||||||| ||| ||||||| || |||||||    
T  28918165 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttaaggaaattcaaatactttgagg 28918233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 1368477 - 1368545
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    ||||||||||||||||  ||||| |||||||  |||||||| |||| ||||||||||| | ||||||||    
T  1368477 agagtgtgtttggatggaggaatgttttgagagaatgtaatattttaagggaattcaaatgttttgagg 1368545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 776080 - 776137
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    ||||||||||| ||||  | ||| |||||||| ||||||||||||||||| |||||||    
T  776080 agagtgtgtttagatggagaaatgttttgagggaatgtaatgttttgaggaaattcaa 776137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 776239 - 776182
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||  |  ||| |||||||| ||||||||||||||||| |||||||    
T  776239 agagtgtgtttggataggaaaatgttttgagggaatgtaatgttttgaggaaattcaa 776182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 15832470 - 15832523
Alignment:
Q  174 tgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    ||||||||||||||| ||| ||| || | ||||||||||||| |||||||||||    
T  15832470 tgtgtttggatgaggtaatgtttcgaaggaatgtaatgttttaagggaattcaa 15832523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 33733432 - 33733472
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaat 210  Q
    |||||||||||||||| |||||| |||||||| ||||||||    
T  33733432 agagtgtgtttggatgggggaatgttttgagggaatgtaat 33733472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 562 - 496
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||| |||||| |||||||| ||||||||||||||||||||||||| || |||||||    
T  562 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagg 496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 405 - 462
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| ||||||||||||||| ||  |||||||||||||||||||||    
T  405 agagtgtgtttggatgggggaatattttgagggaaaataatgttttgagggaattcaa 462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 2031 - 2097
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||| |||||| |||||||| ||||||||||||||||||||||||| || |||||||    
T  2031 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagg 2097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 2188 - 2131
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| ||||||||||||||| ||  |||||||||||||||||||||    
T  2188 agagtgtgtttggatgggggaatattttgagggaaaataatgttttgagggaattcaa 2131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 56429 - 56376
Alignment:
Q  174 tgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  56429 tgtgtttggatgagggaatattttgagggaaagtaatgttttgagggaattcaa 56376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 4570 - 4506
Alignment:
Q  171 gagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttg 235  Q
    |||||||||||||||||||||| |||||||| ||| ||||||||||||| ||||||| |||||||    
T  4570 gagtgtgtttggatgagggaatgttttgagggaatataatgttttgaggaaattcaaatattttg 4506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 5214 - 5150
Alignment:
Q  171 gagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttg 235  Q
    |||||||||||||||||||||| |||||||| ||| ||||||||||||| ||||||| |||||||    
T  5214 gagtgtgtttggatgagggaatgttttgagggaatataatgttttgaggaaattcaaatattttg 5150  T

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Target: scaffold0129 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 19200 - 19265
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||||| |||| |||||||||| ||||||||||||||| ||||||||| ||||||||||    
T  19200 agtgtgtttggatgggggagtattttgagggaatgtaatgttttga-ggaattcaaatattttgagg 19265  T

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Target: scaffold0169 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 4075 - 4143
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    ||||||||||||||| | ||||| |||||||  ||||||||||||||||||||||||| || |||||||    
T  4075 agagtgtgtttggataaaggaatgttttgagagaatgtaatgttttgagggaattcaaatactttgagg 4143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 41997 - 42065
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttgagg 238  Q
    |||||||||||| |||  ||||| |||||||| ||||||||||||||||||||||||| || |||||||    
T  41997 agagtgtgtttgaatggaggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagg 42065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 42137 - 42080
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||||| |||||  |||||||| |||||||||||||||| ||||||||    
T  42137 agagtgtgtttggatgggggaacgttttgagggaatgtaatgttttgagagaattcaa 42080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 82945 - 83000
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    |||||||||||||| | |||| |||||||| |||||||||||||||||||||||||    
T  82945 agtgtgtttggatgggtgaatgttttgagggaatgtaatgttttgagggaattcaa 83000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 233
Target Start/End: Original strand, 2867 - 2930
Alignment:
Q  170 agagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattt 233  Q
    ||||||||||| |||| |||||| ||| |||  ||||||||||||||||||||||||| |||||    
T  2867 agagtgtgtttagatgggggaatgtttcgagagaatgtaatgttttgagggaattcaaatattt 2930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 7153 - 7208
Alignment:
Q  172 agtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaa 227  Q
    ||||||||||||||  ||||| |||||||| |||||| |||||| |||||||||||    
T  7153 agtgtgtttggatggaggaatgttttgagggaatgtattgttttaagggaattcaa 7208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 236
Target Start/End: Original strand, 10887 - 10952
Alignment:
Q  171 gagtgtgtttggatgagggaatattttgaggcaatgtaatgttttgagggaattcaattattttga 236  Q
    ||||||||||| |||   |||| |||| ||| ||||||||||||||||||||||||| || |||||    
T  10887 gagtgtgtttgaatggaagaatgttttaagggaatgtaatgttttgagggaattcaaatactttga 10952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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