View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4515_high_15 (Length: 274)
Name: NF4515_high_15
Description: NF4515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4515_high_15 |
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Alignment Details
Target: chr8 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 37604385 - 37604643
Alignment:
| Q |
1 |
ttgagtgggttttgattgattttcctttcattggaagttacttgtcttcatctatgtttgagtggggaataatggggtgttgctgatttcttgcttttat |
100 |
Q |
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| T |
37604385 |
ttgagtgggttttgattgattttcctttcattggaagttacttgtcttcatctatgtttgagtggggaataatggggtgttgctgatttcttgcttttat |
37604484 |
T |
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| Q |
101 |
aatgcttatgcactttgctnnnnnnnntcaagtttgtaagatatgttcttatatatataaggtttctttaattagaactatgttcttaacattttattct |
200 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37604485 |
aatgcttatgcactttgctaaaaaaaatcaagtttgtaagatatgttcttatatatataaggtttctttaattagaactatgttcttaacattttattct |
37604584 |
T |
|
| Q |
201 |
tttttagtttggtatgttttgttttcttctacgaaactataatgtgatgacaaataaac |
259 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37604585 |
tttttagtttggtatgttttgttttcttctacgaaactataatgtgatgacaaataaac |
37604643 |
T |
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