View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4515_high_16 (Length: 270)
Name: NF4515_high_16
Description: NF4515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4515_high_16 |
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Alignment Details
Target: chr6 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 97 - 252
Target Start/End: Complemental strand, 71831 - 71690
Alignment:
| Q |
97 |
ttatccacaaaactgtcatttaaaatgcaagaaatgcaggttattttcatgagaatctcatttagaagtactccgcaatattacagaaaataccaaaacc |
196 |
Q |
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| T |
71831 |
ttatccacaaaactgtcatttaaaatgcaagaaatgcaggttaat--------------attgagaagtactccgcaatattacagaaaataccaaaacc |
71746 |
T |
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| Q |
197 |
tagttcatcaacaccaaaatacaccaaaaccggctaatagctaaatcctccatcat |
252 |
Q |
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| T |
71745 |
tagttcatcaacaccaaaatacaccaaaaccggctaatagctaaatcctccatcat |
71690 |
T |
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