View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4515_high_18 (Length: 257)
Name: NF4515_high_18
Description: NF4515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4515_high_18 |
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Alignment Details
Target: chr5 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 17 - 247
Target Start/End: Complemental strand, 16847549 - 16847319
Alignment:
| Q |
17 |
caagtagcaacactaggaattccagaatggataacaaaaagcatataatatccaggtggggccacattaagagatgggggcccacgaaccgtcgccttat |
116 |
Q |
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| T |
16847549 |
caagtagcaacactaggaattccaacatggataacaaaaagcatataatatccaggtggggccacattaagagatgggggcccacgaaccgtcgccttat |
16847450 |
T |
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| Q |
117 |
aaaccgaattcccaatctttcccggtcctaatgagctcccgaaaccaaactcaccaaaattttgaccttgcatagaattcacaacctcctccaacgcggt |
216 |
Q |
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| T |
16847449 |
aaaccgaattcgcaatctttcccggtcctaatgagctcccgaaaccaaactcaccaaaattttgatcttgcatagaattcacaacctcctccaacgcggt |
16847350 |
T |
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| Q |
217 |
aacttctaaaaatagcaaccgttgattcatc |
247 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
16847349 |
aacttctaaaaatagcaaccgttgattcatc |
16847319 |
T |
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