View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4515_low_24 (Length: 237)

Name: NF4515_low_24
Description: NF4515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4515_low_24
NF4515_low_24
[»] chr4 (64 HSPs)
chr4 (110-237)||(28465500-28465627)
chr4 (110-236)||(34789382-34789508)
chr4 (104-235)||(46736649-46736780)
chr4 (113-235)||(28166007-28166129)
chr4 (110-237)||(14440247-14440374)
chr4 (110-237)||(56077743-56077870)
chr4 (112-237)||(54440988-54441113)
chr4 (108-235)||(12593022-12593149)
chr4 (110-237)||(21034235-21034363)
chr4 (108-237)||(26974281-26974411)
chr4 (108-237)||(45838966-45839097)
chr4 (108-237)||(41114155-41114286)
chr4 (109-237)||(45838546-45838674)
chr4 (106-237)||(55677376-55677508)
chr4 (112-237)||(34789801-34789927)
chr4 (109-235)||(36168752-36168878)
chr4 (113-237)||(34807558-34807682)
chr4 (100-235)||(33689819-33689953)
chr4 (113-228)||(33777635-33777750)
chr4 (109-233)||(46737078-46737202)
chr4 (112-235)||(28465083-28465206)
chr4 (109-235)||(12593444-12593570)
chr4 (109-237)||(19528868-19528997)
chr4 (113-237)||(14439831-14439955)
chr4 (106-237)||(21034655-21034787)
chr4 (112-235)||(54440573-54440694)
chr4 (112-237)||(24851884-24852010)
chr4 (109-201)||(24851315-24851407)
chr4 (107-237)||(6616669-6616800)
chr4 (113-235)||(16214916-16215038)
chr4 (100-237)||(34807106-34807244)
chr4 (136-229)||(17504386-17504479)
chr4 (136-233)||(6617085-6617182)
chr4 (109-237)||(19529112-19529241)
chr4 (112-237)||(33778031-33778156)
chr4 (136-229)||(35193334-35193427)
chr4 (100-201)||(41608870-41608970)
chr4 (125-209)||(35643570-35643654)
chr4 (112-198)||(1397597-1397683)
chr4 (113-237)||(26974663-26974788)
chr4 (108-236)||(36168327-36168458)
chr4 (111-224)||(23986521-23986635)
chr4 (103-229)||(17503967-17504093)
chr4 (113-237)||(41608377-41608502)
chr4 (110-224)||(30597951-30598065)
chr4 (136-229)||(40160120-40160213)
chr4 (112-183)||(44219377-44219448)
chr4 (106-235)||(229580-229709)
chr4 (113-208)||(229164-229260)
chr4 (108-209)||(51309951-51310053)
chr4 (112-224)||(24336194-24336307)
chr4 (113-221)||(40160525-40160633)
chr4 (146-235)||(18965176-18965265)
chr4 (101-163)||(25938163-25938225)
chr4 (109-210)||(35193748-35193849)
chr4 (111-224)||(44892578-44892692)
chr4 (109-229)||(15523234-15523355)
chr4 (160-217)||(30596301-30596358)
chr4 (121-217)||(31297127-31297224)
chr4 (200-237)||(35643977-35644014)
chr4 (111-163)||(20958351-20958403)
chr4 (109-185)||(24335760-24335836)
chr4 (112-176)||(35644042-35644106)
chr4 (111-191)||(37336613-37336693)
[»] chr3 (73 HSPs)
chr3 (108-237)||(49951544-49951673)
chr3 (107-237)||(49720780-49720910)
chr3 (106-235)||(44676893-44677022)
chr3 (109-237)||(38535308-38535436)
chr3 (110-237)||(43678295-43678422)
chr3 (103-237)||(51473274-51473409)
chr3 (109-237)||(41998228-41998357)
chr3 (110-235)||(50662833-50662958)
chr3 (110-237)||(51828376-51828504)
chr3 (109-237)||(55389604-55389732)
chr3 (110-237)||(51828959-51829086)
chr3 (114-237)||(329850-329973)
chr3 (109-225)||(14654198-14654314)
chr3 (106-237)||(16701208-16701342)
chr3 (112-236)||(32730809-32730933)
chr3 (109-236)||(47431695-47431823)
chr3 (108-235)||(51827955-51828082)
chr3 (109-236)||(2051294-2051425)
chr3 (108-237)||(330255-330384)
chr3 (112-236)||(52237237-52237361)
chr3 (111-237)||(46013841-46013968)
chr3 (104-229)||(34104632-34104757)
chr3 (113-236)||(40839072-40839195)
chr3 (106-237)||(51472851-51472982)
chr3 (110-236)||(40275093-40275221)
chr3 (113-237)||(16689361-16689485)
chr3 (109-237)||(38535714-38535842)
chr3 (109-237)||(52375750-52375878)
chr3 (108-237)||(25534888-25535018)
chr3 (109-237)||(55390016-55390144)
chr3 (110-237)||(40275513-40275639)
chr3 (108-235)||(46013420-46013547)
chr3 (109-236)||(49720370-49720497)
chr3 (108-237)||(51828537-51828667)
chr3 (110-236)||(52375327-52375453)
chr3 (113-229)||(22370599-22370716)
chr3 (110-235)||(49951967-49952092)
chr3 (113-237)||(40838655-40838779)
chr3 (108-237)||(14654610-14654737)
chr3 (108-237)||(2044269-2044398)
chr3 (112-236)||(30513724-30513848)
chr3 (113-237)||(32730392-32730516)
chr3 (107-235)||(39010072-39010200)
chr3 (110-237)||(43678703-43678830)
chr3 (110-237)||(44676472-44676599)
chr3 (112-235)||(52236818-52236941)
chr3 (108-235)||(41998650-41998776)
chr3 (116-237)||(34105067-34105190)
chr3 (136-224)||(43222416-43222504)
chr3 (101-229)||(50900954-50901082)
chr3 (123-222)||(39010456-39010554)
chr3 (112-221)||(36701530-36701640)
chr3 (108-209)||(36701104-36701206)
chr3 (109-221)||(27200126-27200238)
chr3 (109-201)||(33412609-33412701)
chr3 (111-222)||(43222823-43222935)
chr3 (109-221)||(49407795-49407907)
chr3 (111-224)||(49408212-49408326)
chr3 (110-229)||(55192118-55192237)
chr3 (111-224)||(37075687-37075803)
chr3 (112-224)||(50900534-50900647)
chr3 (137-209)||(8874133-8874205)
chr3 (113-209)||(27199705-27199801)
chr3 (111-221)||(37076109-37076219)
chr3 (109-229)||(5137406-5137527)
chr3 (109-185)||(20840559-20840635)
chr3 (108-163)||(23644460-23644515)
chr3 (110-185)||(23644935-23645010)
chr3 (109-163)||(30104481-30104535)
chr3 (113-190)||(25612442-25612519)
chr3 (106-163)||(27393657-27393714)
chr3 (101-229)||(30098188-30098317)
chr3 (108-193)||(39555576-39555661)
[»] chr2 (55 HSPs)
chr2 (108-237)||(38008370-38008499)
chr2 (108-237)||(11539635-11539765)
chr2 (108-237)||(20127734-20127864)
chr2 (108-237)||(4809298-4809427)
chr2 (109-237)||(33921030-33921159)
chr2 (109-237)||(62956-63084)
chr2 (108-237)||(43160429-43160559)
chr2 (108-237)||(16952933-16953064)
chr2 (108-237)||(17060904-17061035)
chr2 (102-220)||(5560043-5560161)
chr2 (108-237)||(6949449-6949579)
chr2 (110-236)||(42192240-42192366)
chr2 (109-237)||(4356175-4356303)
chr2 (109-237)||(20128156-20128284)
chr2 (109-237)||(44219643-44219771)
chr2 (113-237)||(13315496-13315623)
chr2 (109-237)||(11540057-11540185)
chr2 (109-237)||(13399839-13399966)
chr2 (111-237)||(16953353-16953479)
chr2 (110-235)||(4355755-4355880)
chr2 (113-237)||(15551093-15551218)
chr2 (109-237)||(38007949-38008078)
chr2 (97-237)||(42192661-42192802)
chr2 (109-237)||(32418565-32418693)
chr2 (99-237)||(649516-649654)
chr2 (109-237)||(16175768-16175897)
chr2 (109-237)||(43216128-43216256)
chr2 (108-230)||(44220071-44220193)
chr2 (101-237)||(32418150-32418284)
chr2 (113-237)||(63377-63507)
chr2 (113-235)||(33920615-33920737)
chr2 (136-237)||(4808905-4809006)
chr2 (113-235)||(15550676-15550799)
chr2 (110-236)||(6949862-6949990)
chr2 (108-229)||(31797204-31797325)
chr2 (112-192)||(649801-649881)
chr2 (113-235)||(9330215-9330338)
chr2 (142-237)||(13399454-13399549)
chr2 (109-237)||(24140098-24140221)
chr2 (113-235)||(43160012-43160135)
chr2 (109-221)||(25336034-25336147)
chr2 (109-224)||(28143461-28143576)
chr2 (113-172)||(9329915-9329974)
chr2 (109-224)||(14942275-14942393)
chr2 (183-237)||(5560969-5561023)
chr2 (108-220)||(3824143-3824256)
chr2 (150-218)||(5035903-5035972)
chr2 (110-193)||(35779708-35779791)
chr2 (136-224)||(2190506-2190596)
chr2 (97-163)||(20444736-20444802)
chr2 (136-217)||(20495219-20495301)
chr2 (108-144)||(17023598-17023634)
chr2 (102-193)||(28617076-28617167)
chr2 (108-229)||(18450828-18450950)
chr2 (109-163)||(20440523-20440577)
[»] chr7 (51 HSPs)
chr7 (108-235)||(7732908-7733035)
chr7 (113-237)||(25637617-25637741)
chr7 (112-237)||(9181534-9181659)
chr7 (111-237)||(15712366-15712492)
chr7 (108-237)||(16081297-16081426)
chr7 (112-237)||(27245623-27245748)
chr7 (109-237)||(48248010-48248139)
chr7 (108-237)||(11971332-11971465)
chr7 (109-230)||(16917712-16917833)
chr7 (108-237)||(786780-786910)
chr7 (113-237)||(5745642-5745766)
chr7 (101-237)||(26026737-26026873)
chr7 (113-237)||(14311706-14311830)
chr7 (110-237)||(28687593-28687720)
chr7 (109-235)||(7732487-7732613)
chr7 (108-237)||(16081718-16081847)
chr7 (109-237)||(5333879-5334007)
chr7 (110-237)||(26048366-26048492)
chr7 (106-236)||(2758118-2758248)
chr7 (109-237)||(25637196-25637325)
chr7 (111-235)||(39388688-39388813)
chr7 (110-237)||(27245203-27245331)
chr7 (113-235)||(26026320-26026443)
chr7 (112-222)||(5334253-5334363)
chr7 (113-207)||(26047960-26048054)
chr7 (123-237)||(28687918-28688032)
chr7 (116-237)||(35161220-35161342)
chr7 (100-237)||(48247577-48247718)
chr7 (113-208)||(787234-787329)
chr7 (107-237)||(9181828-9181961)
chr7 (111-229)||(9394157-9394274)
chr7 (107-237)||(5746058-5746189)
chr7 (110-237)||(24929722-24929854)
chr7 (106-208)||(34595219-34595322)
chr7 (101-198)||(39136991-39137088)
chr7 (113-237)||(11973821-11973945)
chr7 (121-201)||(35160664-35160746)
chr7 (99-229)||(49064023-49064153)
chr7 (109-224)||(39136685-39136800)
chr7 (112-237)||(14311317-14311443)
chr7 (110-229)||(4477702-4477821)
chr7 (200-235)||(35160892-35160927)
chr7 (106-221)||(45815340-45815454)
chr7 (109-200)||(49064176-49064267)
chr7 (112-229)||(9393738-9393855)
chr7 (123-224)||(33880633-33880735)
chr7 (109-163)||(37787259-37787313)
chr7 (113-175)||(40669689-40669751)
chr7 (109-193)||(2658838-2658922)
chr7 (113-224)||(35578902-35579013)
chr7 (99-163)||(37786756-37786820)
[»] chr5 (38 HSPs)
chr5 (109-237)||(28290063-28290191)
chr5 (109-237)||(18149732-18149860)
chr5 (111-237)||(8419040-8419165)
chr5 (110-237)||(19291356-19291484)
chr5 (109-236)||(15029729-15029856)
chr5 (114-237)||(38900648-38900771)
chr5 (99-237)||(21370675-21370821)
chr5 (109-237)||(21371115-21371243)
chr5 (110-237)||(38901059-38901186)
chr5 (100-237)||(15115514-15115647)
chr5 (109-236)||(4967189-4967318)
chr5 (109-237)||(18150142-18150271)
chr5 (108-237)||(28289682-28289811)
chr5 (136-237)||(39083384-39083487)
chr5 (113-237)||(4966819-4966942)
chr5 (113-186)||(14340401-14340474)
chr5 (100-237)||(5161570-5161710)
chr5 (111-237)||(32697642-32697771)
chr5 (111-229)||(10721787-10721905)
chr5 (136-235)||(5161989-5162089)
chr5 (136-237)||(14340826-14340930)
chr5 (100-224)||(20266346-20266471)
chr5 (109-217)||(16752581-16752689)
chr5 (109-200)||(22651767-22651858)
chr5 (111-229)||(28494845-28494963)
chr5 (108-229)||(41834485-41834607)
chr5 (111-209)||(27307507-27307605)
chr5 (109-191)||(28495296-28495378)
chr5 (136-224)||(13557018-13557106)
chr5 (136-224)||(32305844-32305932)
chr5 (112-235)||(22651347-22651470)
chr5 (102-221)||(27307053-27307172)
chr5 (173-224)||(17260389-17260441)
chr5 (109-185)||(17260691-17260767)
chr5 (102-160)||(15708963-15709021)
chr5 (109-163)||(24362328-24362382)
chr5 (110-163)||(164191-164244)
chr5 (101-193)||(8647429-8647521)
[»] chr8 (42 HSPs)
chr8 (107-237)||(41260268-41260398)
chr8 (108-237)||(18428180-18428310)
chr8 (110-237)||(18049590-18049718)
chr8 (109-235)||(5730816-5730942)
chr8 (109-237)||(599917-600045)
chr8 (112-237)||(28254427-28254553)
chr8 (109-237)||(15256247-15256378)
chr8 (109-237)||(34799078-34799207)
chr8 (109-237)||(15255852-15255980)
chr8 (109-237)||(16578515-16578643)
chr8 (112-235)||(2208716-2208840)
chr8 (113-237)||(9797145-9797270)
chr8 (100-237)||(34799502-34799639)
chr8 (111-236)||(42035773-42035898)
chr8 (111-237)||(28254845-28254971)
chr8 (110-237)||(9796726-9796853)
chr8 (109-235)||(41260682-41260808)
chr8 (105-237)||(599527-599659)
chr8 (109-237)||(16578107-16578235)
chr8 (109-237)||(35427231-35427359)
chr8 (109-235)||(6115531-6115658)
chr8 (112-235)||(5731233-5731356)
chr8 (113-235)||(18050012-18050134)
chr8 (15-109)||(44135579-44135680)
chr8 (110-235)||(7911037-7911162)
chr8 (113-209)||(35694325-35694421)
chr8 (139-237)||(26252838-26252936)
chr8 (108-225)||(7910614-7910730)
chr8 (111-237)||(35693869-35693997)
chr8 (109-221)||(42036206-42036319)
chr8 (106-218)||(18674144-18674256)
chr8 (182-237)||(35426885-35426940)
chr8 (99-224)||(9930087-9930213)
chr8 (108-224)||(28877321-28877437)
chr8 (113-229)||(18805167-18805282)
chr8 (100-163)||(35426832-35426895)
chr8 (100-150)||(10919691-10919741)
chr8 (137-226)||(10047066-10047155)
chr8 (100-162)||(11656950-11657012)
chr8 (106-163)||(44831243-44831300)
chr8 (165-224)||(2617800-2617860)
chr8 (109-161)||(33742921-33742973)
[»] chr6 (32 HSPs)
chr6 (100-237)||(5114458-5114595)
chr6 (113-237)||(24640604-24640728)
chr6 (110-237)||(25472431-25472559)
chr6 (109-237)||(31573719-31573852)
chr6 (109-237)||(30251110-30251239)
chr6 (109-237)||(5120888-5121016)
chr6 (110-237)||(31073561-31073688)
chr6 (109-237)||(29891499-29891631)
chr6 (108-235)||(31574146-31574273)
chr6 (113-235)||(25468852-25468976)
chr6 (110-237)||(28636292-28636418)
chr6 (110-237)||(31073143-31073277)
chr6 (109-237)||(29891079-29891207)
chr6 (110-224)||(32836428-32836542)
chr6 (108-229)||(35163612-35163735)
chr6 (183-237)||(28636615-28636669)
chr6 (110-163)||(22534217-22534270)
chr6 (113-229)||(35163187-35163303)
chr6 (100-224)||(835384-835508)
chr6 (136-200)||(31242832-31242896)
chr6 (136-224)||(33096038-33096131)
chr6 (107-193)||(3835188-3835274)
chr6 (100-229)||(11445412-11445542)
chr6 (112-229)||(33095716-33095834)
chr6 (110-163)||(18257629-18257682)
chr6 (109-163)||(28472636-28472690)
chr6 (109-163)||(29859825-29859879)
chr6 (108-185)||(23073997-23074074)
chr6 (111-164)||(30250722-30250775)
chr6 (109-189)||(835692-835772)
chr6 (109-193)||(20741099-20741183)
chr6 (97-161)||(31470302-31470366)
[»] chr1 (62 HSPs)
chr1 (109-237)||(9992153-9992282)
chr1 (108-235)||(37505065-37505193)
chr1 (112-237)||(34555799-34555926)
chr1 (103-237)||(21938556-21938690)
chr1 (110-235)||(9992576-9992701)
chr1 (109-237)||(16299101-16299228)
chr1 (108-237)||(30786769-30786899)
chr1 (110-229)||(10278977-10279093)
chr1 (109-235)||(1837504-1837630)
chr1 (101-237)||(44954645-44954781)
chr1 (113-235)||(50305203-50305328)
chr1 (107-237)||(52335929-52336059)
chr1 (108-235)||(29438928-29439056)
chr1 (110-237)||(443970-444097)
chr1 (110-237)||(2868127-2868254)
chr1 (121-229)||(29439347-29439457)
chr1 (111-237)||(16298683-16298809)
chr1 (136-233)||(2867937-2868034)
chr1 (100-237)||(4080011-4080148)
chr1 (110-235)||(37505489-37505613)
chr1 (112-235)||(10278550-10278674)
chr1 (109-209)||(30787245-30787345)
chr1 (113-212)||(37421388-37421488)
chr1 (113-229)||(39485068-39485184)
chr1 (112-235)||(44582479-44582603)
chr1 (112-228)||(44582059-44582175)
chr1 (110-237)||(23340183-23340310)
chr1 (109-237)||(34555378-34555508)
chr1 (113-224)||(45048158-45048269)
chr1 (148-237)||(17641403-17641492)
chr1 (113-237)||(17641783-17641912)
chr1 (136-237)||(44954252-44954353)
chr1 (136-237)||(8230060-8230161)
chr1 (113-237)||(37421163-37421289)
chr1 (109-236)||(8229636-8229766)
chr1 (112-203)||(50304441-50304532)
chr1 (110-224)||(9833583-9833698)
chr1 (109-223)||(50926674-50926788)
chr1 (109-229)||(17088566-17088686)
chr1 (112-237)||(1744330-1744454)
chr1 (113-237)||(6224700-6224826)
chr1 (111-222)||(23526659-23526770)
chr1 (109-229)||(44802597-44802718)
chr1 (113-229)||(45048562-45048678)
chr1 (112-222)||(23526964-23527074)
chr1 (121-223)||(25274767-25274869)
chr1 (135-220)||(29020905-29020991)
chr1 (112-223)||(50926232-50926345)
chr1 (135-224)||(44291742-44291832)
chr1 (107-183)||(39843497-39843573)
chr1 (98-185)||(15646665-15646752)
chr1 (109-196)||(29021325-29021412)
chr1 (121-223)||(50419401-50419504)
chr1 (112-209)||(44291303-44291401)
chr1 (105-163)||(52268285-52268343)
chr1 (106-163)||(18984611-18984668)
chr1 (109-161)||(15646191-15646243)
chr1 (107-229)||(17088143-17088270)
chr1 (150-221)||(36229414-36229486)
chr1 (99-163)||(39154512-39154576)
chr1 (110-217)||(50419698-50419806)
chr1 (109-224)||(52235099-52235215)
[»] scaffold0712 (2 HSPs)
scaffold0712 (110-237)||(6392-6519)
scaffold0712 (106-224)||(6827-6946)
[»] scaffold0709 (2 HSPs)
scaffold0709 (110-237)||(6410-6537)
scaffold0709 (106-224)||(6845-6964)
[»] scaffold0097 (2 HSPs)
scaffold0097 (109-237)||(46686-46815)
scaffold0097 (108-237)||(46264-46394)
[»] scaffold0007 (4 HSPs)
scaffold0007 (105-224)||(205799-205918)
scaffold0007 (105-200)||(210793-210888)
scaffold0007 (113-208)||(204931-205027)
scaffold0007 (113-208)||(205361-205457)
[»] scaffold1432 (1 HSPs)
scaffold1432 (109-223)||(498-612)
[»] scaffold0025 (1 HSPs)
scaffold0025 (188-237)||(78395-78444)
[»] scaffold0108 (2 HSPs)
scaffold0108 (110-208)||(15545-15644)
scaffold0108 (108-185)||(15111-15188)
[»] scaffold0021 (1 HSPs)
scaffold0021 (147-221)||(159315-159390)
[»] scaffold0951 (1 HSPs)
scaffold0951 (109-163)||(1666-1720)


Alignment Details
Target: chr4 (Bit Score: 116; Significance: 4e-59; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 110 - 237
Target Start/End: Complemental strand, 28465627 - 28465500
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttttt 209  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  28465627 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 28465528  T
Q  210 gcaattttagtcctatctccctatttcc 237  Q
    ||||||||||||||||||||||||||||    
T  28465527 gcaattttagtcctatctccctatttcc 28465500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 110 - 236
Target Start/End: Original strand, 34789382 - 34789508
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttttt 209  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  34789382 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 34789481  T
Q  210 gcaattttagtcctatctccctatttc 236  Q
    ||| |||||||||||||||||||||||    
T  34789482 gcagttttagtcctatctccctatttc 34789508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 104 - 235
Target Start/End: Original strand, 46736649 - 46736780
Alignment:
Q  104 aattaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg 203  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  46736649 aattaaggcttaattatacttttggttctactattttgaccaactcacgaaaatggtcttattttttttaaatcgaacaaaattgtccttaaactatatg 46736748  T
Q  204 ttttttgcaattttagtcctatctccctattt 235  Q
    |||||||||  |||| ||||||||||||||||    
T  46736749 ttttttgcagatttaatcctatctccctattt 46736780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 113 - 235
Target Start/End: Original strand, 28166007 - 28166129
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgca 212  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28166007 ttaattaaatttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatattttttttgca 28166106  T
Q  213 attttagtcctatctccctattt 235  Q
     ||||||||||||||||||||||    
T  28166107 gttttagtcctatctccctattt 28166129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 110 - 237
Target Start/End: Complemental strand, 14440374 - 14440247
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttttt 209  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  14440374 ggcttaattatacttttggtcctaccattttgaccaacttacgaaaatggtcctatcttttttaaatcgaacaaaatcatccttaaactatatgtttttt 14440275  T
Q  210 gcaattttagtcctatctccctatttcc 237  Q
    ||| |||||||| |||||||||||||||    
T  14440274 gcagttttagtcatatctccctatttcc 14440247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 110 - 237
Target Start/End: Complemental strand, 56077870 - 56077743
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttttt 209  Q
    |||||||||| | |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  56077870 ggcttaattacatttttggtcctaccattttgaccaactcacgaaaatggtcttatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 56077771  T
Q  210 gcaattttagtcctatctccctatttcc 237  Q
    ||| ||||||||||||||||||||||||    
T  56077770 gcagttttagtcctatctccctatttcc 56077743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 112 - 237
Target Start/End: Complemental strand, 54441113 - 54440988
Alignment:
Q  112 cttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgc 211  Q
    |||||||| |||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  54441113 cttaattacacttttggtcctaccattttgatcagctcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgc 54441014  T
Q  212 aattttagtcctatctccctatttcc 237  Q
    | ||||||||||||||||||||||||    
T  54441013 agttttagtcctatctccctatttcc 54440988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 108 - 235
Target Start/End: Original strand, 12593022 - 12593149
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttt 207  Q
    |||||||||||| |||||||||||||| | |||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||    
T  12593022 aaggcttaattacacttttggtcctaccagtttgaccaactcacgaaaatggtcataccttttttaaatcgaacaaaatcgtccttaaactatatgtttt 12593121  T
Q  208 ttgcaattttagtcctatctccctattt 235  Q
    ||||||||||| ||||||||||||||||    
T  12593122 ttgcaattttaatcctatctccctattt 12593149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 110 - 237
Target Start/End: Original strand, 21034235 - 21034363
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg-ttttt 208  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  21034235 ggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 21034334  T
Q  209 tgcaattttagtcctatctccctatttcc 237  Q
    | || |||||||| |||||||||||||||    
T  21034335 tacagttttagtcatatctccctatttcc 21034363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 108 - 237
Target Start/End: Original strand, 26974281 - 26974411
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg-ttt 206  Q
    |||||||||||| |||||||||||||| ||||| || ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||    
T  26974281 aaggcttaattacacttttggtcctaccattttaacaaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 26974380  T
Q  207 tttgcaattttagtcctatctccctatttcc 237  Q
    ||| || ||||||||||||||||||||||||    
T  26974381 tttacagttttagtcctatctccctatttcc 26974411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 108 - 237
Target Start/End: Complemental strand, 45839097 - 45838966
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtt-- 205  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||      
T  45839097 aaggtttaattacacttttggtcctactattttgaccaactcacgaaa-tggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 45838999  T
Q  206 -ttttgcaattttagtcctatctccctatttcc 237  Q
     ||||||| |||||||||||||| |||||||||    
T  45838998 tttttgcagttttagtcctatcttcctatttcc 45838966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 108 - 237
Target Start/End: Original strand, 41114155 - 41114286
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg--tt 205  Q
    |||| ||||| | |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||  ||    
T  41114155 aaggtttaatgacacttttggtcctaccattttgaccaactcacgaaaagggtcctatcttttttaaatcgaacaaaaacgtccttaaactatatgtttt 41114254  T
Q  206 ttttgcaattttagtcctatctccctatttcc 237  Q
    ||||||| |||||||| |||||||||||||||    
T  41114255 ttttgcagttttagtcatatctccctatttcc 41114286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 109 - 237
Target Start/End: Original strand, 45838546 - 45838674
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    ||||||| ||| ||||||||||||  |||||||||||||||||| || |||||||| || |||||||||||||||||| |||| ||||||||||||||||    
T  45838546 aggcttatttacacttttggtccttgtattttgaccaactcacgtaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttt 45838645  T
Q  209 tgcaattttagtcctatctccctatttcc 237  Q
    |||| ||||||||||||||||||||||||    
T  45838646 tgcagttttagtcctatctccctatttcc 45838674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 106 - 237
Target Start/End: Complemental strand, 55677508 - 55677376
Alignment:
Q  106 ttaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtt 205  Q
    |||||||||||||| ||||||||||||  ||||||||||||||||||||| |||||||| || |||||||||||||||||| |||  |||||||||||||    
T  55677508 ttaaggcttaattacacttttggtccttgtattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtctctaaactatatgtt 55677409  T
Q  206 -ttttgcaattttagtcctatctccctatttcc 237  Q
     |||| |||||||||||||||||||||||||||    
T  55677408 tttttacaattttagtcctatctccctatttcc 55677376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 112 - 237
Target Start/End: Complemental strand, 34789927 - 34789801
Alignment:
Q  112 cttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtt-ttttg 210  Q
    |||||||| ||||||||||||   |||||||||||||||||||| |||||||| || ||||||||||||||||||||||| ||||||||||||| |||||    
T  34789927 cttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactatatgtttttttg 34789828  T
Q  211 caattttagtcctatctccctatttcc 237  Q
    || ||||||||||||||||||||||||    
T  34789827 cagttttagtcctatctccctatttcc 34789801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 36168878 - 36168752
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    ||||||||||| ||| |||||||||| ||||||||||||||||||||||| |||||| |||||||||| |||||||||| | |||||| |||||||||||    
T  36168878 aggcttaattacactcttggtcctaccattttgaccaactcacgaaaatgatcctattttttttaaatagaacaaaattattcttaaattatatgttttt 36168779  T
Q  209 tgcaattttagtcctatctccctattt 235  Q
    |||  ||||||||||||||||||||||    
T  36168778 tgcggttttagtcctatctccctattt 36168752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 113 - 237
Target Start/End: Complemental strand, 34807682 - 34807558
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgca 212  Q
    ||||||||| |||||||| || |||||||| ||||||||||||||  | ||||||||||||| ||||||||||| ||||||||||||||||||||| |||    
T  34807682 ttaattatatttttggtcttattattttgatcaactcacgaaaattattctatcttttttaattcgaacaaaatcgtccttaaactatatgtttttggca 34807583  T
Q  213 attttagtcctatctccctatttcc 237  Q
     ||||||||||||||||||||||||    
T  34807582 gttttagtcctatctccctatttcc 34807558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 100 - 235
Target Start/End: Original strand, 33689819 - 33689953
Alignment:
Q  100 ataaaattaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaacta 199  Q
    |||||||| ||||||||||| ||||||||||||   |||||||||||||||| ||| |||||||| || |||||||||||||||||| ||||||||||||    
T  33689819 ataaaatttaggcttaattacacttttggtccttgcattttgaccaactcacaaaattggtcctacctcttttaaatcgaacaaaatcgtccttaaacta 33689918  T
Q  200 tatgttttttgcaattttagtcctatctccctattt 235  Q
    |||| |||||||| |||||||| |||||||||||||    
T  33689919 tatg-tttttgcagttttagtcatatctccctattt 33689953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 113 - 228
Target Start/End: Original strand, 33777635 - 33777750
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgca 212  Q
    ||||||| ||||||| |||||| ||||||||||||||||||||||| || ||| ||||| |||||||||||||| |||||||||||||||||||||||||    
T  33777635 ttaattacacttttgttcctaccattttgaccaactcacgaaaatgatcatatttttttaaaatcgaacaaaatcgtccttaaactatatgttttttgca 33777734  T
Q  213 attttagtcctatctc 228  Q
    |||||| |||||||||    
T  33777735 attttaatcctatctc 33777750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 46737202 - 46737078
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    ||||||||||| ||||||||||||   |||||||||||||||||||| |||||||| || |||||||||||||||||| |||| ||||||||||||||||    
T  46737202 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttt 46737103  T
Q  209 tgcaattttagtcctatctccctat 233  Q
    |||| |||||||| ||||| |||||    
T  46737102 tgcagttttagtcatatcttcctat 46737078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 112 - 235
Target Start/End: Original strand, 28465083 - 28465206
Alignment:
Q  112 cttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgc 211  Q
    |||||||| |||||| ||||| | ||||||||||||| |||||| || ||||| || |||||||||||||||||| ||||||||||||||||||||||||    
T  28465083 cttaattacacttttagtccttccattttgaccaacttacgaaattgatcctacctcttttaaatcgaacaaaatcgtccttaaactatatgttttttgc 28465182  T
Q  212 aattttagtcctatctccctattt 235  Q
    | |||||||| |||||||||||||    
T  28465183 agttttagtcatatctccctattt 28465206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 12593570 - 12593444
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    ||||||||||| ||||||||||||   |||||||||||||||||||| ||||| || || |||||||||||||||||| |||  |||||||||| |||||    
T  12593570 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtctgtaaactatatattttt 12593471  T
Q  209 tgcaattttagtcctatctccctattt 235  Q
    |||| ||||||||||||||||||||||    
T  12593470 tgcagttttagtcctatctccctattt 12593444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 109 - 237
Target Start/End: Original strand, 19528868 - 19528997
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg-tttt 207  Q
    ||||||||||| ||||||||||||   ||||||||||| |||||||| |||||||| || |||||||||||| ||||| |||| ||||||||||| ||||    
T  19528868 aggcttaattacacttttggtccttgcattttgaccaattcacgaaattggtcctacctcttttaaatcgaataaaatcgtccctaaactatatgttttt 19528967  T
Q  208 ttgcaattttagtcctatctccctatttcc 237  Q
    ||||| ||||||||||||||||||||||||    
T  19528968 ttgcagttttagtcctatctccctatttcc 19528997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 113 - 237
Target Start/End: Original strand, 14439831 - 14439955
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgca 212  Q
    ||||||| | ||||||||||   |||||||||||||||||||| ||||| || |||||||||||  |||||||| |||| ||||||||||||||||||||    
T  14439831 ttaattacatttttggtccttgcattttgaccaactcacgaaattggtcataccttttttaaattaaacaaaatcgtccctaaactatatgttttttgca 14439930  T
Q  213 attttagtcctatctccctatttcc 237  Q
     ||||||||||||||||||||||||    
T  14439931 gttttagtcctatctccctatttcc 14439955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 106 - 237
Target Start/End: Complemental strand, 21034787 - 21034655
Alignment:
Q  106 ttaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactata-tgt 204  Q
    |||||||||||||| | ||||||||||   |||||||||||||||||||| ||||||||||| |||||||||||||||||| |||| | ||||||| | |    
T  21034787 ttaaggcttaattacaattttggtccttgcattttgaccaactcacgaaattggtcctatctcttttaaatcgaacaaaatcgtccctgaactatatttt 21034688  T
Q  205 tttttgcaattttagtcctatctccctatttcc 237  Q
    |||||||| ||||||| ||||||||||||||||    
T  21034687 tttttgcagttttagttctatctccctatttcc 21034655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 112 - 235
Target Start/End: Original strand, 54440573 - 54440694
Alignment:
Q  112 cttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgc 211  Q
    |||||||| ||||||||||||   |||||||||||||||||||| |||||||| || |||||||||||||||||| |||| |||||  ||||||||||||    
T  54440573 cttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaac--tatgttttttgc 54440670  T
Q  212 aattttagtcctatctccctattt 235  Q
    | ||||||||||||||||||||||    
T  54440671 agttttagtcctatctccctattt 54440694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 112 - 237
Target Start/End: Complemental strand, 24852010 - 24851884
Alignment:
Q  112 cttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtt-ttttg 210  Q
    |||||||||||||||||||||   |||||||||||||||||||| || ||||| || |||||||||||||||||| |||| ||||||||||||| |||||    
T  24852010 cttaattatacttttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttg 24851911  T
Q  211 caattttagtcctatctccctatttcc 237  Q
    || ||||||||||||||  ||||||||    
T  24851910 cagttttagtcctatctttctatttcc 24851884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 109 - 201
Target Start/End: Original strand, 24851315 - 24851407
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactata 201  Q
    ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  24851315 aggcttaattacacttttgatcctaccattttgaccaactcacgaaaatggtgctatcttttttaaattgaacaaaatcgtccttaaactata 24851407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 107 - 237
Target Start/End: Original strand, 6616669 - 6616800
Alignment:
Q  107 taaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg-tt 205  Q
    ||||| ||||||| ||||||||| |||  ||||||| |||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||| ||    
T  6616669 taaggtttaattacacttttggttctatcattttgatcaactcacgaaaatggtcttattttttttaaatcgaacaaaatcgtccttaaactatatgttt 6616768  T
Q  206 ttttgcaattttagtcctatctccctatttcc 237  Q
    ||||||  | ||||||||| ||| ||||||||    
T  6616769 ttttgctgtgttagtcctacctctctatttcc 6616800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 113 - 235
Target Start/End: Complemental strand, 16215038 - 16214916
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgca 212  Q
    |||||||||||||||||||||  ||||||| ||||| ||||||||| || |||||||||||||| ||| ||||| ||||||||||||||| |||||||||    
T  16215038 ttaattatacttttggtcctatcattttgatcaacttacgaaaatgatcatatcttttttaaattgaataaaatcgtccttaaactatatattttttgca 16214939  T
Q  213 attttagtcctatctccctattt 235  Q
     ||||| | |||||| |||||||    
T  16214938 gttttaattctatcttcctattt 16214916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 100 - 237
Target Start/End: Original strand, 34807106 - 34807244
Alignment:
Q  100 ataaaattaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaacta 199  Q
    |||||||  ||||||||||| ||||||||||||   ||||||| |||||||||||| ||||| || || |||||||||||||||||| |||| |||| ||    
T  34807106 ataaaatgtaggcttaattacacttttggtccttgcattttgatcaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaagta 34807205  T
Q  200 tatg-ttttttgcaattttagtcctatctccctatttcc 237  Q
    |||| ||||||||| |||||||||||||||| |||||||    
T  34807206 tatgtttttttgcagttttagtcctatctccatatttcc 34807244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 136 - 229
Target Start/End: Complemental strand, 17504479 - 17504386
Alignment:
Q  136 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgcaattttagtcctatctcc 229  Q
    ||||||| || ||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||| ||| ||||    
T  17504479 attttgaacagctcacgaaaatggtcctatctcttttaaatcgaacaaaaccgtccttaaactatatgttttttgcaattttagtactacctcc 17504386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 136 - 233
Target Start/End: Complemental strand, 6617182 - 6617085
Alignment:
Q  136 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgcaattttagtcctatctccctat 233  Q
    |||||||| ||||||||||| |||||||| || |||||||||||| ||||| |||| |||||||||| ||||||||| ||||||||||||||||||||    
T  6617182 attttgactaactcacgaaattggtcctacctcttttaaatcgaataaaatcgtccctaaactatattttttttgcagttttagtcctatctccctat 6617085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 109 - 237
Target Start/End: Complemental strand, 19529241 - 19529112
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtt-tt 207  Q
    ||||||||||| ||||||| |||||| ||||||||||||| |  |||||| | |||||| |||||||| ||||||||| ||| |||||||||||||| ||    
T  19529241 aggcttaattacacttttgctcctaccattttgaccaacttataaaaatgattctatctcttttaaattgaacaaaatcgtctttaaactatatgttttt 19529142  T
Q  208 ttgcaattttagtcctatctccctatttcc 237  Q
    ||||| ||||||| |||||||| |||||||    
T  19529141 ttgcagttttagttctatctccatatttcc 19529112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 112 - 237
Target Start/End: Complemental strand, 33778156 - 33778031
Alignment:
Q  112 cttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgc 211  Q
    |||||||| |||||| || |||| |||||||| |||||||||||||| | ||| || ||||||||| |||||||| || | |||| ||||||||||||||    
T  33778156 cttaattacacttttcgttctaccattttgactaactcacgaaaatgattctacctcttttaaatcaaacaaaatcgttcctaaattatatgttttttgc 33778057  T
Q  212 aattttagtcctatctccctatttcc 237  Q
    | ||||||| ||||||||||||||||    
T  33778056 agttttagttctatctccctatttcc 33778031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 136 - 229
Target Start/End: Original strand, 35193334 - 35193427
Alignment:
Q  136 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgcaattttagtcctatctcc 229  Q
    ||||||| || |||||||||||||||||| || ||| |||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||    
T  35193334 attttgatcagctcacgaaaatggtcctacctctttcaaatcgaacaaaatcgtccctaaactatatgttttttgcagttttagtcctatctcc 35193427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 100 - 201
Target Start/End: Complemental strand, 41608970 - 41608870
Alignment:
Q  100 ataaaattaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaacta 199  Q
    ||||||||| |||||||||| |||||||||||||| |||||||||||||||||||| |||||||| || ||||||||| |||||||| || |||||||||    
T  41608970 ataaaatta-ggcttaattacacttttggtcctaccattttgaccaactcacgaaattggtcctacctcttttaaatccaacaaaatcgttcttaaacta 41608872  T
Q  200 ta 201  Q
    ||    
T  41608871 ta 41608870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 125 - 209
Target Start/End: Original strand, 35643570 - 35643654
Alignment:
Q  125 ttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttttt 209  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||| |||| ||| ||||| ||||||||||||||||||||||    
T  35643570 ttggtcttaccattttgaccaactcacgaaaatggtcctatctttttaaaattgaataaaatcgtccttaaactatatgtttttt 35643654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 112 - 198
Target Start/End: Original strand, 1397597 - 1397683
Alignment:
Q  112 cttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaact 198  Q
    |||||||| ||||||| ||| || |||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||    
T  1397597 cttaattacacttttgatccaaccattttgaccaactcataaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact 1397683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 113 - 237
Target Start/End: Complemental strand, 26974788 - 26974663
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtt-ttttgc 211  Q
    ||||||| | ||||||||||   |||||||  || |||||||| |||||||| || ||||||||||||||||||||||| ||||||||||||| ||||||    
T  26974788 ttaattacatttttggtccttgcattttgaataattcacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactatatgtttttttgc 26974689  T
Q  212 aattttagtcctatctccctatttcc 237  Q
    | |||||||| ||||| |||||||||    
T  26974688 agttttagtcatatcttcctatttcc 26974663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 236
Target Start/End: Original strand, 36168327 - 36168458
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg---t 204  Q
    |||| ||||||| ||||||| ||||   |||||||||||| ||||||| ||||| || || |||||||||||||||||| ||||||||| ||||||   |    
T  36168327 aaggtttaattacacttttgctccttgcattttgaccaacccacgaaattggtcttacctcttttaaatcgaacaaaatcgtccttaaattatatgtttt 36168426  T
Q  205 tttttgcaattttagtcctatctccctatttc 236  Q
    |||||||| |||||||| ||||||||||||||    
T  36168427 tttttgcagttttagtcttatctccctatttc 36168458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 111 - 224
Target Start/End: Original strand, 23986521 - 23986635
Alignment:
Q  111 gcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgtttttt 209  Q
    ||||||||  ||||||||||||   |||||||||| ||||||||||||||| | ||| ||| ||||||||||||| ||||| |||||||| |||||||||    
T  23986521 gcttaatttcacttttggtcctcacattttgaccagctcacgaaaatggtcatgtctctttcaaatcgaacaaaactgtccctaaactatcatgtttttt 23986620  T
Q  210 gcaattttagtccta 224  Q
    ||| |||||||||||    
T  23986621 gcagttttagtccta 23986635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 103 - 229
Target Start/End: Original strand, 17503967 - 17504093
Alignment:
Q  103 aaattaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-a 201  Q
    ||||||||||||||||||||| ||||||||   |||||||||| |||||||||||||||||  || ||| |||| ||||| ||  |||| |||||||| |    
T  17503967 aaattaaggcttaattatactgttggtcctcgcattttgaccatctcacgaaaatggtcctgcctctttcaaatggaacataaccgtcc-taaactatca 17504065  T
Q  202 tgttttttgcaattttagtcctatctcc 229  Q
    ||||||||||| ||||||||||| ||||    
T  17504066 tgttttttgcagttttagtcctacctcc 17504093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 113 - 237
Target Start/End: Original strand, 41608377 - 41608502
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg---tttttt 209  Q
    ||||||| ||||||||||||   ||||||| ||||||| |||| ||||| || || |||||||||||||||||| ||||  ||||||||||   ||||||    
T  41608377 ttaattacacttttggtccttgcattttgatcaactcatgaaattggtcatacctcttttaaatcgaacaaaatcgtcc--aaactatatgttttttttt 41608474  T
Q  210 gcaattttagtcctatctccctatttcc 237  Q
    ||| |||||||||||||||| |||||||    
T  41608475 gcagttttagtcctatctccatatttcc 41608502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 30598065 - 30597951
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttttt 209  Q
    ||||| |||| ||||||||||||  | |||||||||||||||| || |||| || ||| |||||||||||||||||| |||| |||| ||||| ||| ||    
T  30598065 ggcttgattacacttttggtcctcgtgttttgaccaactcacggaattggttctgtctcttttaaatcgaacaaaatcgtccctaaattatatttttgtt 30597966  T
Q  210 gcaattttagtccta 224  Q
    ||| |||| ||||||    
T  30597965 gcacttttggtccta 30597951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 136 - 229
Target Start/End: Original strand, 40160120 - 40160213
Alignment:
Q  136 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgcaattttagtcctatctcc 229  Q
    ||||| |||| ||||||||||| ||| |  || |||||||||||||||||  |||| |||||||||||||||||||| ||||||||||| ||||    
T  40160120 attttaaccagctcacgaaaatagtcatgcctcttttaaatcgaacaaaaccgtccctaaactatatgttttttgcagttttagtcctacctcc 40160213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 183
Target Start/End: Original strand, 44219377 - 44219448
Alignment:
Q  112 cttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaa 183  Q
    |||||||| ||||||||||||  |||||| |||||||||||||| ||||||| |||||||||||| ||||||    
T  44219377 cttaattacacttttggtcctcgtattttaaccaactcacgaaattggtcctctcttttttaaattgaacaa 44219448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 235
Target Start/End: Complemental strand, 229709 - 229580
Alignment:
Q  106 ttaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgt 204  Q
    |||||| ||||||| |||||||||| |   |||||||||| ||||||||||||||| |  || ||| ||||| |||||||| ||||||||||||| |||     
T  229709 ttaaggtttaattacacttttggtcttcgcattttgaccagctcacgaaaatggtcttgcctctttcaaatcaaacaaaatcgtccttaaactatcatg- 229611  T
Q  205 tttttgcaattttagtcctatctccctattt 235  Q
    |||||||| ||||| ||||| |||| |||||    
T  229610 tttttgcagttttaatcctacctccttattt 229580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 208
Target Start/End: Original strand, 229164 - 229260
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgttttt 208  Q
    ||||||| ||||||||||||  ||||||||||| ||| ||||||||||| |  || ||| |||| ||||||||| ||||||||||||| ||||||||    
T  229164 ttaattacacttttggtcctcgtattttgaccagctcgcgaaaatggtcttgcctctttcaaattgaacaaaatcgtccttaaactatcatgttttt 229260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 108 - 209
Target Start/End: Complemental strand, 51310053 - 51309951
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgttt 206  Q
    |||||||||||  ||||||||||||   ||||| |||| ||||||||||||||| |  || ||| |||||||||||||  |||| |||||||| ||||||    
T  51310053 aaggcttaattgcacttttggtcctcgcatttttaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaacagtccctaaactatcatgttt 51309954  T
Q  207 ttt 209  Q
    |||    
T  51309953 ttt 51309951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 224
Target Start/End: Complemental strand, 24336307 - 24336194
Alignment:
Q  112 cttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgttttttg 210  Q
    |||||||| ||||||| ||||   |||||||| | |||||||||||||||||  || ||| |||||||||||||  || | |||| ||| ||||||||||    
T  24336307 cttaattacacttttgatcctcgcattttgacaagctcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgttcctaaattatcatgttttttg 24336208  T
Q  211 caattttagtccta 224  Q
    |  |||||||||||    
T  24336207 ctcttttagtccta 24336194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 221
Target Start/End: Complemental strand, 40160633 - 40160525
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgttttttgc 211  Q
    ||||||| | ||||||||||   |||||||||||||||||||||| ||| |  || ||| |||| ||||||||  |||| |||||||| |||||||||||    
T  40160633 ttaattacatttttggtccttgcattttgaccaactcacgaaaatagtcatgcctctttcaaattgaacaaaaccgtcc-taaactatcatgttttttgc 40160535  T
Q  212 aattttagtc 221  Q
    | ||||||||    
T  40160534 agttttagtc 40160525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 235
Target Start/End: Original strand, 18965176 - 18965265
Alignment:
Q  146 actcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgttttttgcaattttagtcctatctccctattt 235  Q
    ||||||||||| |||| |  || ||| |||||||||||||| ||||||||||||| ||| |||||||| ||||||| ||| |||| |||||    
T  18965176 actcacgaaaacggtcttgcctctttcaaatcgaacaaaatcgtccttaaactatcatg-tttttgcagttttagttctacctccttattt 18965265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 163
Target Start/End: Complemental strand, 25938225 - 25938163
Alignment:
Q  101 taaaattaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcct 163  Q
    |||||| |||||||||||| ||||||||||||  | ||||| || |||||||||| |||||||    
T  25938225 taaaataaaggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcct 25938163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 210
Target Start/End: Complemental strand, 35193849 - 35193748
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgtttt 207  Q
    ||||||||||| ||||||||||||   |||||||  | |||||||||||||||||  || ||| ||||| |||||||  |||| |||||||| |||||||    
T  35193849 aggcttaattacacttttggtccttgcattttgataagctcacgaaaatggtcctgcctctttcaaatctaacaaaaccgtcc-taaactatcatgtttt 35193751  T
Q  208 ttg 210  Q
    |||    
T  35193750 ttg 35193748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 224
Target Start/End: Complemental strand, 44892692 - 44892578
Alignment:
Q  111 gcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttt-tt 209  Q
    ||||||||||| ||||||||||  | |||||||| ||||||||||||||| ||  | |||| |||  |||||||| |||| || || ||||| |||| ||    
T  44892692 gcttaattatatttttggtcctcgtgttttgacctactcacgaaaatggttctgccattttaaaacagaacaaaactgtctttcaattatattttttgtt 44892593  T
Q  210 gcaattttagtccta 224  Q
    ||| |||| ||||||    
T  44892592 gcatttttcgtccta 44892578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 229
Target Start/End: Original strand, 15523234 - 15523355
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaacta-tatgtttt 207  Q
    ||||||||||| ||||||||||||  | ||||| || |||||||||| |||||||  | |||| |||  ||||||||  |||||| || || ||| ||||    
T  15523234 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattatttttt 15523333  T
Q  208 ttgcaattttagtcctatctcc 229  Q
    ||||| |||| |||||| ||||    
T  15523334 ttgcatttttcgtcctacctcc 15523355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 30596301 - 30596358
Alignment:
Q  160 tcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgcaatttt 217  Q
    |||| ||| ||||||||||||||||||||| | |||||||||| ||| ||||| ||||    
T  30596301 tcctgtctcttttaaatcgaacaaaattgttcctaaactatatttttgttgcactttt 30596358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 217
Target Start/End: Complemental strand, 31297224 - 31297127
Alignment:
Q  121 acttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgttttttgcaatttt 217  Q
    ||||||||| ||  |||||  |||||||||||||| ||||| |  ||||||||||||||||||| ||| || ||  ||||  ||||||||||||||||    
T  31297224 acttttggttctcgtatttaaaccaactcacgaaattggtcatgccttttttaaatcgaacaaagttgcccctatgctatcttgttttttgcaatttt 31297127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 237
Target Start/End: Complemental strand, 35644014 - 35643977
Alignment:
Q  200 tatgttttttgcaattttagtcctatctccctatttcc 237  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  35644014 tatgttttttgcagttttagtcttatctccctatttcc 35643977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 20958403 - 20958351
Alignment:
Q  111 gcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcct 163  Q
    ||||||||| |||||| |||||  ||||||| || ||||||||||||||||||    
T  20958403 gcttaattacacttttagtcctcgtattttggcctactcacgaaaatggtcct 20958351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 185
Target Start/End: Original strand, 24335760 - 24335836
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaa 185  Q
    ||||||||||| ||||| | ||||   |||||||||| ||||||||||||||| |  || ||| |||||||||||||    
T  24335760 aggcttaattacactttcgatccttgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaa 24335836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 35644106 - 35644042
Alignment:
Q  112 cttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaat 176  Q
    |||||||| ||||||||||||   ||||||||||||||||||||  |||| || || ||||||||    
T  35644106 cttaattacacttttggtccttgcattttgaccaactcacgaaataggtcatacctcttttaaat 35644042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 191
Target Start/End: Complemental strand, 37336693 - 37336613
Alignment:
Q  111 gcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtcc 191  Q
    |||||||| || ||||||||||   ||||| ||||||||||||||  |||  | ||||||| |||||||||||| ||||||    
T  37336693 gcttaattgtatttttggtcctcgcattttaaccaactcacgaaataggttatctctttttcaaatcgaacaaagttgtcc 37336613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 114; Significance: 6e-58; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 108 - 237
Target Start/End: Original strand, 49951544 - 49951673
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttt 207  Q
    |||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  49951544 aaggtttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 49951643  T
Q  208 ttgcaattttagtcctatctccctatttcc 237  Q
    ||||||||||||||||||||||||||||||    
T  49951644 ttgcaattttagtcctatctccctatttcc 49951673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 107 - 237
Target Start/End: Complemental strand, 49720910 - 49720780
Alignment:
Q  107 taaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttt 206  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  49720910 taaggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgttt 49720811  T
Q  207 tttgcaattttagtcctatctccctatttcc 237  Q
    |||||| |||||||| |||||||||||||||    
T  49720810 tttgcagttttagtcttatctccctatttcc 49720780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 106 - 235
Target Start/End: Complemental strand, 44677022 - 44676893
Alignment:
Q  106 ttaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtt 205  Q
    |||||| ||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  44677022 ttaaggtttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgtt 44676923  T
Q  206 ttttgcaattttagtcctatctccctattt 235  Q
    ||||||||||||||||||||||| ||||||    
T  44676922 ttttgcaattttagtcctatctctctattt 44676893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 109 - 237
Target Start/End: Original strand, 38535308 - 38535436
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    ||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  38535308 aggcttaattacacttttggtcctaccattttgaccaactcaggaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 38535407  T
Q  209 tgcaattttagtcctatctccctatttcc 237  Q
    |||| ||| ||||||||||||||||||||    
T  38535408 tgcagtttcagtcctatctccctatttcc 38535436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 110 - 237
Target Start/End: Original strand, 43678295 - 43678422
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttttt 209  Q
    |||||||||| |||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  43678295 ggcttaattacacttttggtcctaccattttgaccaactcacgaacatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 43678394  T
Q  210 gcaattttagtcctatctccctatttcc 237  Q
    ||| |||||||| |||||||||||||||    
T  43678395 gcagttttagtcttatctccctatttcc 43678422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 103 - 237
Target Start/End: Complemental strand, 51473409 - 51473274
Alignment:
Q  103 aaattaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatat 202  Q
    |||| |||| ||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  51473409 aaatcaaggtttaattacacttttgatcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatat 51473310  T
Q  203 gtt-ttttgcaattttagtcctatctccctatttcc 237  Q
    ||| ||||||| ||||||||||||||||||||||||    
T  51473309 gtttttttgcagttttagtcctatctccctatttcc 51473274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 109 - 237
Target Start/End: Original strand, 41998228 - 41998357
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg-tttt 207  Q
    ||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  41998228 aggcttaattacacttttggtcctaccattttgaccaactcgcgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 41998327  T
Q  208 ttgcaattttagtcctatctccctatttcc 237  Q
    ||||| |||||||| |||||||||||||||    
T  41998328 ttgcagttttagtcatatctccctatttcc 41998357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 110 - 235
Target Start/End: Complemental strand, 50662958 - 50662833
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttttt 209  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  50662958 ggcttaattatacttttggtcctaccattttgacaaactcacgaaaatagtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 50662859  T
Q  210 gcaattttagtcctatctccctattt 235  Q
    ||| ||||||||||| ||||||||||    
T  50662858 gcagttttagtcctagctccctattt 50662833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 110 - 237
Target Start/End: Complemental strand, 51828504 - 51828376
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtt-ttt 208  Q
    |||||||||| |||||||||||||| | |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||    
T  51828504 ggcttaattacacttttggtcctaccactttgaccaactcacgaaaatggtcatatattttttaaatcgaacaaaattgtccttaaactatatgtttttt 51828405  T
Q  209 tgcaattttagtcctatctccctatttcc 237  Q
    |||| ||||||||||||||||||||||||    
T  51828404 tgcagttttagtcctatctccctatttcc 51828376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 109 - 237
Target Start/End: Original strand, 55389604 - 55389732
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    |||| |||||| |||||||||||| | |||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  55389604 aggcataattacacttttggtcctcccatttcgaccaactcacgaaaatggtcctaccttttttaaatcgaacaaaatcgtccttaaactatatgttttt 55389703  T
Q  209 tgcaattttagtcctatctccctatttcc 237  Q
    |||| ||||||||||||||||||||||||    
T  55389704 tgcagttttagtcctatctccctatttcc 55389732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 110 - 237
Target Start/End: Complemental strand, 51829086 - 51828959
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttttt 209  Q
    |||||||||| |||||||||| ||||||||||| |||||||||||||||||| |||||||||||| || |||||||| ||||||||||||||||||||||    
T  51829086 ggcttaattacacttttggtcatactattttgatcaactcacgaaaatggtcgtatcttttttaattcaaacaaaatcgtccttaaactatatgtttttt 51828987  T
Q  210 gcaattttagtcctatctccctatttcc 237  Q
    ||| ||||||||||||||||||||||||    
T  51828986 gcagttttagtcctatctccctatttcc 51828959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 114 - 237
Target Start/End: Original strand, 329850 - 329973
Alignment:
Q  114 taattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgcaa 213  Q
    |||||| ||||||||| || | ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||     
T  329850 taattacacttttggttcttccattttgaccaactcacgaaaatggtcctaacttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcag 329949  T
Q  214 ttttagtcctatctccctatttcc 237  Q
    |||||||||||||||||| |||||    
T  329950 ttttagtcctatctccctgtttcc 329973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 109 - 225
Target Start/End: Original strand, 14654198 - 14654314
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    ||||||||||| ||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  14654198 aggcttaattacacttttgatactaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaactatatgttttt 14654297  T
Q  209 tgcaattttagtcctat 225  Q
    |||| ||||||||||||    
T  14654298 tgcatttttagtcctat 14654314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 106 - 237
Target Start/End: Complemental strand, 16701342 - 16701208
Alignment:
Q  106 ttaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtt 205  Q
    |||||||||||||| | |||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||    
T  16701342 ttaaggcttaattacatttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaattcgaacaaaatcgtccttaaactatatgtt 16701243  T
Q  206 ---ttttgcaattttagtcctatctccctatttcc 237  Q
       ||||||| |||||||| |||||||||||||||    
T  16701242 tttttttgcagttttagtcatatctccctatttcc 16701208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 112 - 236
Target Start/End: Complemental strand, 32730933 - 32730809
Alignment:
Q  112 cttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgc 211  Q
    |||||||| |||||||||| ||| ||||| ||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  32730933 cttaattacacttttggtcataccattttaaccaactcaagaaaatggtcctatcttttttaaattgaacaaaatcgtccttaaactatatgttttttgc 32730834  T
Q  212 aattttagtcctatctccctatttc 236  Q
    | ||||| |||||||||||||||||    
T  32730833 agttttaatcctatctccctatttc 32730809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 109 - 236
Target Start/End: Original strand, 47431695 - 47431823
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg-tttt 207  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||| || || |||||||||||||||||| ||| |||||||||||| ||||    
T  47431695 aggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtctttaaactatatgttttt 47431794  T
Q  208 ttgcaattttagtcctatctccctatttc 236  Q
    ||||| |||||||||||||||||||||||    
T  47431795 ttgcagttttagtcctatctccctatttc 47431823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 108 - 235
Target Start/End: Original strand, 51827955 - 51828082
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttt 207  Q
    |||||||||||| ||||||||||||   |||||||||||||||||||| |||||||| || |||||||||||||||||| |||| |||||||||||||||    
T  51827955 aaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctagctcttttaaatcgaacaaaatcgtccctaaactatatgtttt 51828054  T
Q  208 ttgcaattttagtcctatctccctattt 235  Q
    ||||| ||||||||||||||||||||||    
T  51828055 ttgcatttttagtcctatctccctattt 51828082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 109 - 236
Target Start/End: Original strand, 2051294 - 2051425
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg----t 204  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    |    
T  2051294 aggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgttcttaaactatatgttttt 2051393  T
Q  205 tttttgcaattttagtcctatctccctatttc 236  Q
    |||||||| ||||| |||||| ||||||||||    
T  2051394 tttttgcagttttattcctatttccctatttc 2051425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 108 - 237
Target Start/End: Complemental strand, 330384 - 330255
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttt 207  Q
    |||||||||||| || |||||||||   ||||||||||||||||||||||||||||| |||||||||||| |||||||| |||| |||||||||||||||    
T  330384 aaggcttaattacacatttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtccctaaactatatgtttt 330285  T
Q  208 ttgcaattttagtcctatctccctatttcc 237  Q
    ||||| |||||||| |||||||||||||||    
T  330284 ttgcagttttagtcatatctccctatttcc 330255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 112 - 236
Target Start/End: Complemental strand, 52237361 - 52237237
Alignment:
Q  112 cttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgc 211  Q
    |||||||| ||||||||||||   ||||||||||||||||||||||||||||| || |||||||||||||||||| |||| |||| ||||||||||||||    
T  52237361 cttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaattatatgttttttgc 52237262  T
Q  212 aattttagtcctatctccctatttc 236  Q
    | |||||||||||||||||||||||    
T  52237261 agttttagtcctatctccctatttc 52237237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 111 - 237
Target Start/End: Complemental strand, 46013968 - 46013841
Alignment:
Q  111 gcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtt-tttt 209  Q
    ||||||||| ||||||||| |||  |||||||||||||| | |||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  46013968 gcttaattacacttttggtactatcattttgaccaactcccaaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttt 46013869  T
Q  210 gcaattttagtcctatctccctatttcc 237  Q
    ||| ||||||||||||||||||||||||    
T  46013868 gcagttttagtcctatctccctatttcc 46013841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 104 - 229
Target Start/End: Original strand, 34104632 - 34104757
Alignment:
Q  104 aattaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg 203  Q
    ||||||||||| |||| |||||| || |||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||| ||||||||||||    
T  34104632 aattaaggcttcattacactttttgttctaccattttgaccaactcacgaaaatggttctatcttttttaaattgaacaaaatcgtcattaaactatatg 34104731  T
Q  204 ttttttgcaattttagtcctatctcc 229  Q
    ||||||||| |||||||| |||||||    
T  34104732 ttttttgcagttttagtcatatctcc 34104757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 113 - 236
Target Start/End: Complemental strand, 40839195 - 40839072
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgca 212  Q
    ||||||| ||||||||||||   |||||||| ||||||||||||||||| || || |||||||||||||||||| |||| ||||||||||||||||||||    
T  40839195 ttaattacacttttggtcctcacattttgacaaactcacgaaaatggtcttacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgca 40839096  T
Q  213 attttagtcctatctccctatttc 236  Q
     |||||||||||||||||||||||    
T  40839095 gttttagtcctatctccctatttc 40839072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 106 - 237
Target Start/End: Original strand, 51472851 - 51472982
Alignment:
Q  106 ttaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtt 205  Q
    |||||||||||||||||||||||||||   ||||||||||||||| |||| |  ||||| || ||||||||| ||||||||||||| |||| ||||||||    
T  51472851 ttaaggcttaattatacttttggtccttgcattttgaccaactcatgaaatttttcctacctcttttaaatcaaacaaaattgtccctaaagtatatgtt 51472950  T
Q  206 ttttgcaattttagtcctatctccctatttcc 237  Q
    ||||||| ||||||||||||||||||||||||    
T  51472951 ttttgcagttttagtcctatctccctatttcc 51472982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 110 - 236
Target Start/End: Original strand, 40275093 - 40275221
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg--tttt 207  Q
    |||||||||| ||||||||||||   ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||| ||||  ||||    
T  40275093 ggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaattgtccctaaactctatgtttttt 40275192  T
Q  208 ttgcaattttagtcctatctccctatttc 236  Q
    ||||| |||||||||||||||| ||||||    
T  40275193 ttgcagttttagtcctatctccatatttc 40275221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 113 - 237
Target Start/End: Original strand, 16689361 - 16689485
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgca 212  Q
    ||||||| | |||||||||||  |||||||||||||||||||| |||||||| || |||||||||||||||||| |||| |||| |||||||||||||||    
T  16689361 ttaattacagttttggtcctagcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccataaaatatatgttttttgca 16689460  T
Q  213 attttagtcctatctccctatttcc 237  Q
     ||||||||||||| ||||||||||    
T  16689461 gttttagtcctatcaccctatttcc 16689485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 109 - 237
Target Start/End: Complemental strand, 38535842 - 38535714
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    |||||||||||||||||||||||    ||||||||||||| |||||| | |||| |||| |||||||||||| ||||| |||| ||||||||||||||||    
T  38535842 aggcttaattatacttttggtccgtgcattttgaccaacttacgaaattagtccgatctcttttaaatcgaataaaatcgtccctaaactatatgttttt 38535743  T
Q  209 tgcaattttagtcctatctccctatttcc 237  Q
    |||| ||||||||||||||||||||||||    
T  38535742 tgcagttttagtcctatctccctatttcc 38535714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 109 - 237
Target Start/End: Complemental strand, 52375878 - 52375750
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    ||||||||||| ||||||||||||   ||||||||||||||||||||||||||||| || |||||||| ||||||||| |||| ||||||||||||||||    
T  52375878 aggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaattgaacaaaatcgtccataaactatatgttttt 52375779  T
Q  209 tgcaattttagtcctatctccctatttcc 237  Q
    |||| |||||||| |||  ||||||||||    
T  52375778 tgcagttttagtcatattcccctatttcc 52375750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 108 - 237
Target Start/End: Original strand, 25534888 - 25535018
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgt-ccttaaactatatgttt 206  Q
    |||||||||||| ||||||||||||   ||||||||||| ||| ||||||||||||| || |||||||||||||||||| || || |||| |||||||||    
T  25534888 aaggcttaattacacttttggtcctcgcattttgaccaattcatgaaaatggtcctacctcttttaaatcgaacaaaatcgtcccctaaattatatgttt 25534987  T
Q  207 tttgcaattttagtcctatctccctatttcc 237  Q
    |||||| ||||||||||||||||||||||||    
T  25534988 tttgcagttttagtcctatctccctatttcc 25535018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 109 - 237
Target Start/End: Complemental strand, 55390144 - 55390016
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    ||||||||||| ||||||||||||   ||||| ||||| ||||||||||||||||| |||||||||||| |||||||| |||  ||||||||||||||||    
T  55390144 aggcttaattacacttttggtcctcgcattttaaccaattcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtcactaaactatatgttttt 55390045  T
Q  209 tgcaattttagtcctatctccctatttcc 237  Q
    || | ||||||||||| ||||||||||||    
T  55390044 tgtagttttagtcctacctccctatttcc 55390016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 110 - 237
Target Start/End: Complemental strand, 40275639 - 40275513
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttttt 209  Q
    |||||||||| ||||||||||||   |||||||||||||||||||| |||||||| || |||||||||||||||||| |||  |||||||||||||||||    
T  40275639 ggcttaattacacttttggtcctcacattttgaccaactcacgaaa-tggtcctacctcttttaaatcgaacaaaatcgtctctaaactatatgtttttt 40275541  T
Q  210 gcaattttagtcctatctccctatttcc 237  Q
    ||| |||||||| |||| ||||||||||    
T  40275540 gcagttttagtcatatccccctatttcc 40275513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 108 - 235
Target Start/End: Original strand, 46013420 - 46013547
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttt 207  Q
    |||||||||||| ||||||| ||||   |||||||||||||||||||| ||||| || || |||||||||||||||||| |||| |||| ||||||||||    
T  46013420 aaggcttaattacacttttgatccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaagtatatgtttt 46013519  T
Q  208 ttgcaattttagtcctatctccctattt 235  Q
    ||||| |||||||| |||||||||||||    
T  46013520 ttgcagttttagtcatatctccctattt 46013547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 109 - 236
Target Start/End: Original strand, 49720370 - 49720497
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    ||||||||||| ||||||| ||||   |||||||||||||||||||| |||||||| || |||||||||||||||||| |||| |||| |||| ||||||    
T  49720370 aggcttaattacacttttgatccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaagtatacgttttt 49720469  T
Q  209 tgcaattttagtcctatctccctatttc 236  Q
    |||| |||||||||||||||| ||||||    
T  49720470 tgcagttttagtcctatctccttatttc 49720497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 108 - 237
Target Start/End: Original strand, 51828537 - 51828667
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg-ttt 206  Q
    |||||||||||| ||||||||||||   ||||||||||| | |||||| ||||| || || |||||||||||||||||| |||| ||||||||||| |||    
T  51828537 aaggcttaattacacttttggtccttgcattttgaccaaattacgaaattggtcttacctcttttaaatcgaacaaaatcgtccgtaaactatatgtttt 51828636  T
Q  207 tttgcaattttagtcctatctccctatttcc 237  Q
    |||||| ||||||||||||||||||||||||    
T  51828637 tttgcagttttagtcctatctccctatttcc 51828667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 110 - 236
Target Start/End: Original strand, 52375327 - 52375453
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttttt 209  Q
    |||||||||| ||||||||||||   ||||| ||||| |||||||||||||| || || |||||||| ||||||||| |||| |||||||||||||||||    
T  52375327 ggcttaattacacttttggtcctcacattttaaccaattcacgaaaatggtcatacctcttttaaattgaacaaaatcgtccctaaactatatgtttttt 52375426  T
Q  210 gcaattttagtcctatctccctatttc 236  Q
    ||| ||||||| |||||||||||||||    
T  52375427 gcagttttagttctatctccctatttc 52375453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 113 - 229
Target Start/End: Original strand, 22370599 - 22370716
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg-ttttttgc 211  Q
    ||||||| ||||||||||||   ||||||||||||||||||||||||||||| |||||||||| | |||||||| |||| ||||||||||| ||||||||    
T  22370599 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaaccaaacaaaatcgtccctaaactatatgtttttttgc 22370698  T
Q  212 aattttagtcctatctcc 229  Q
    | ||||||||||||||||    
T  22370699 agttttagtcctatctcc 22370716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 110 - 235
Target Start/End: Complemental strand, 49952092 - 49951967
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttttt 209  Q
    |||||||||| | ||||||||||   |||||||||||||||||||| ||||| || || |||||||||||||||||| ||| |||||||| |||||||||    
T  49952092 ggcttaattacatttttggtccttgcattttgaccaactcacgaaattggtcttacctcttttaaatcgaacaaaatcgtcattaaactacatgtttttt 49951993  T
Q  210 gcaattttagtcctatctccctattt 235  Q
    ||| |||||||| |||||||||||||    
T  49951992 gcagttttagtcatatctccctattt 49951967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 113 - 237
Target Start/End: Original strand, 40838655 - 40838779
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgca 212  Q
    ||||||| ||||||| ||||   |||||||||||||||||||||||||| || || ||||||||| |||||||| |||| ||||||||||||||||||||    
T  40838655 ttaattacacttttgatcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcaaacaaaatcgtccataaactatatgttttttgca 40838754  T
Q  213 attttagtcctatctccctatttcc 237  Q
     |||||||| |||| ||||||||||    
T  40838755 gttttagtcatatccccctatttcc 40838779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 108 - 237
Target Start/End: Complemental strand, 14654737 - 14654610
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttt 207  Q
    |||||||||||| ||||||||||||   |||||||||||||||||||| |||  ||| || |||||||||||||||||| |||| |||||  ||||||||    
T  14654737 aaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggctctacctcttttaaatcgaacaaaatcgtccgtaaac--tatgtttt 14654640  T
Q  208 ttgcaattttagtcctatctccctatttcc 237  Q
    ||||| |||||||||||||||| |||||||    
T  14654639 ttgcagttttagtcctatctccttatttcc 14654610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 108 - 237
Target Start/End: Original strand, 2044269 - 2044398
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttt 207  Q
    |||||||||||  ||||||||| ||   ||||||||||||||| |||||||||| || || |||||||||||||||||| |||| |||| ||||||||||    
T  2044269 aaggcttaatttcacttttggttctcgcattttgaccaactcatgaaaatggtcatacctcttttaaatcgaacaaaatcgtccataaattatatgtttt 2044368  T
Q  208 ttgcaattttagtcctatctccctatttcc 237  Q
    ||| | |||||||| |||||||||||||||    
T  2044369 ttggagttttagtcatatctccctatttcc 2044398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 112 - 236
Target Start/End: Original strand, 30513724 - 30513848
Alignment:
Q  112 cttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt-tg 210  Q
    |||||||| | ||||||||||   |||||||| |||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||| ||    
T  30513724 cttaattacatttttggtccttgcattttgacaaactcacgaaaatggtcctatcttttttaaatcgaataaaatcgt-cttaaactatatgtttttctg 30513822  T
Q  211 caattttagtcctatctccctatttc 236  Q
    || |||||||| ||||||| ||||||    
T  30513823 cagttttagtcatatctccatatttc 30513848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 113 - 237
Target Start/End: Original strand, 32730392 - 32730516
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgca 212  Q
    ||||||| ||||||||||||   ||||||||||||||  |||| |||||||| || |||||||| ||||||||| |||| ||||||||||||||||||||    
T  32730392 ttaattacacttttggtccttgcattttgaccaactcttgaaattggtcctacctcttttaaattgaacaaaatcgtccctaaactatatgttttttgca 32730491  T
Q  213 attttagtcctatctccctatttcc 237  Q
     ||||| || |||||||||||||||    
T  32730492 gttttaatcgtatctccctatttcc 32730516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 107 - 235
Target Start/End: Original strand, 39010072 - 39010200
Alignment:
Q  107 taaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttt 206  Q
    ||||||||||||| | ||||||||||   |||||||||||||||| ||| || || || || ||||||||||||||||||||| |||||||| |||||||    
T  39010072 taaggcttaattacatttttggtccttgcattttgaccaactcacaaaattgctcatacctcttttaaatcgaacaaaattgttcttaaactgtatgttt 39010171  T
Q  207 tttgcaattttagtcctatctccctattt 235  Q
    |||||| ||||||||  ||||||||||||    
T  39010172 tttgcagttttagtcacatctccctattt 39010200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 110 - 237
Target Start/End: Complemental strand, 43678830 - 43678703
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttttt 209  Q
    |||||||||| ||||||||||||   ||||||| |||||||||||  |||||| | || |||||||||||||||||| |||| |||||||||||||||||    
T  43678830 ggcttaattacacttttggtccttgcattttgatcaactcacgaacttggtccaacctcttttaaatcgaacaaaatcgtccataaactatatgtttttt 43678731  T
Q  210 gcaattttagtcctatctccctatttcc 237  Q
    ||| ||| |||| ||||| |||||||||    
T  43678730 gcagtttcagtcatatcttcctatttcc 43678703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 110 - 237
Target Start/End: Original strand, 44676472 - 44676599
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttttt 209  Q
    |||||||||| ||||||||||||   |||||||| |||||| |||| || || || || |||||||||||||||||  |||| |||||||||||||||||    
T  44676472 ggcttaattacacttttggtccttgcattttgacaaactcatgaaattgatcatacctcttttaaatcgaacaaaaccgtccctaaactatatgtttttt 44676571  T
Q  210 gcaattttagtcctatctccctatttcc 237  Q
    |||  |||||||||||||||||||||||    
T  44676572 gcagctttagtcctatctccctatttcc 44676599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 112 - 235
Target Start/End: Original strand, 52236818 - 52236941
Alignment:
Q  112 cttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgc 211  Q
    |||||||| |||||| |||||   ||||||| ||| |||||||||||||| || || |||||||||||||||||| |||| |||||||||||||||||||    
T  52236818 cttaattacacttttagtcctcgcattttgaacaattcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgc 52236917  T
Q  212 aattttagtcctatctccctattt 235  Q
    | |||||||| |||| ||||||||    
T  52236918 agttttagtcatatccccctattt 52236941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 108 - 235
Target Start/End: Complemental strand, 41998776 - 41998650
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg-ttt 206  Q
    |||||||||||| ||||||||||||   ||||||||||||| |||||| |||||||| || |||||||||||||||||| |||| | ||||||||| |||    
T  41998776 aaggcttaattacacttttggtccttgcattttgaccaacttacgaaattggtcctacctcttttaaatcgaacaaaatcgtccct-aactatatgtttt 41998678  T
Q  207 tttgcaattttagtcctatctccctattt 235  Q
    |||||| ||||||||||| ||||||||||    
T  41998677 tttgcagttttagtccta-ctccctattt 41998650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 237
Target Start/End: Complemental strand, 34105190 - 34105067
Alignment:
Q  116 attatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtt--ttttgcaa 213  Q
    |||| ||||||||||||   ||||||||||||| |||||  |||||||  || |||||||||||||||||| |||| |||||||||||||  |||||||     
T  34105190 attacacttttggtccttgcattttgaccaacttacgaagttggtcctccctcttttaaatcgaacaaaatcgtccctaaactatatgttttttttgcag 34105091  T
Q  214 ttttagtcctatctccctatttcc 237  Q
    ||||||||| |||||| |||||||    
T  34105090 ttttagtcccatctccttatttcc 34105067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 136 - 224
Target Start/End: Original strand, 43222416 - 43222504
Alignment:
Q  136 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgcaattttagtccta 224  Q
    |||||||||||||||||||||| ||  | ||| |||||||||||||||||| |||| |||||||||||||||||||| ||||| |||||    
T  43222416 attttgaccaactcacgaaaatagttatgtctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgcatttttaatccta 43222504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 229
Target Start/End: Complemental strand, 50901082 - 50900954
Alignment:
Q  101 taaaattaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat 200  Q
    ||||||| ||||||||||| ||||||||||||   |||||||||| ||||| ||||||| |||  || ||  |||||||||||||  |||| ||||||||    
T  50901082 taaaatttaggcttaattacacttttggtcctcgcattttgaccagctcacaaaaatggccctgcctcttacaaatcgaacaaaaccgtccctaaactat 50900983  T
Q  201 atgttttttgcaattttagtcctatctcc 229  Q
    |||||||||||| |||| |||||| ||||    
T  50900982 atgttttttgcagtttttgtcctacctcc 50900954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 123 - 222
Target Start/End: Complemental strand, 39010554 - 39010456
Alignment:
Q  123 ttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgcaattttagtcc 222  Q
    ||||| |||| | |||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||| |  |||||||||| || |||||||||    
T  39010554 ttttgatcctgccattttgaccagctcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaatccgtatgtttttt-cagttttagtcc 39010456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 112 - 221
Target Start/End: Complemental strand, 36701640 - 36701530
Alignment:
Q  112 cttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgttttttg 210  Q
    |||||||| ||||||||||||   |||||||||| ||||||||||||||| | ||| ||| ||||||||||||||  ||| |||||||| ||||||||||    
T  36701640 cttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgtctctttcaaatcgaacaaaatcatccctaaactatcatgttttttg 36701541  T
Q  211 caattttagtc 221  Q
    || ||||||||    
T  36701540 cagttttagtc 36701530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 209
Target Start/End: Original strand, 36701104 - 36701206
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgttt 206  Q
    |||||||||||| ||||||||||||   ||||||| ||||||||||||||| || |  || ||| |||||||||||||| |||| |||||||| ||||||    
T  36701104 aaggcttaattacacttttggtcctcgcattttgatcaactcacgaaaatgatcatgcctctttcaaatcgaacaaaatcgtccataaactatcatgttt 36701203  T
Q  207 ttt 209  Q
    |||    
T  36701204 ttt 36701206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 109 - 221
Target Start/End: Complemental strand, 27200238 - 27200126
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgtttt 207  Q
    ||||||||||| ||||||||||||   |||||||||| |||||||||||||| ||  || ||| ||||||||||| |  |||| |||||||| |||||||    
T  27200238 aggcttaattacacttttggtccttgcattttgaccagctcacgaaaatggttctgcctctttcaaatcgaacaataccgtcc-taaactatcatgtttt 27200140  T
Q  208 ttgcaattttagtc 221  Q
    ||||| ||||||||    
T  27200139 ttgcagttttagtc 27200126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 201
Target Start/End: Complemental strand, 33412701 - 33412609
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactata 201  Q
    ||||||||||| ||||||||||||   ||||||| || |||||||||||||| || ||| |||  ||||||||||||| |||| |||||||||    
T  33412701 aggcttaattacacttttggtcctcgcattttgatcagctcacgaaaatggttctgtctctttcgaatcgaacaaaatcgtccctaaactata 33412609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 222
Target Start/End: Complemental strand, 43222935 - 43222823
Alignment:
Q  111 gcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg-tttttt 209  Q
    ||||||| | ||||||||||||   |||||||| | | ||||||||||||| |  || |||||||||||||||||| |||| |||||| |||| ||||||    
T  43222935 gcttaatcacacttttggtcctcgcattttgacaagcgcacgaaaatggtcatgcctcttttaaatcgaacaaaatcgtccctaaactttatgttttttt 43222836  T
Q  210 gcaattttagtcc 222  Q
    ||| |||||||||    
T  43222835 gcagttttagtcc 43222823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 221
Target Start/End: Original strand, 49407795 - 49407907
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    ||||||||||| ||||||||||||   |||||||||| ||||||||||||||| |  || ||| |||| ||||||||  |||| |||||| ||||||||     
T  49407795 aggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatagaacaaaaccgtccctaaactttatgttttg 49407894  T
Q  209 tgcaattttagtc 221  Q
    | || ||||||||    
T  49407895 tacagttttagtc 49407907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 111 - 224
Target Start/End: Complemental strand, 49408326 - 49408212
Alignment:
Q  111 gcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atg-ttttt 208  Q
    ||||||||| ||||||||| ||   |||||||||| ||||||||||||||  | ||| ||| ||||||||||||| ||||| |||||||| ||| |||||    
T  49408326 gcttaattacacttttggtactcgcattttgaccatctcacgaaaatggttgtgtctctttcaaatcgaacaaaactgtcc-taaactatcatgtttttt 49408228  T
Q  209 tgcaattttagtccta 224  Q
    |||| |||||||||||    
T  49408227 tgcagttttagtccta 49408212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 229
Target Start/End: Original strand, 55192118 - 55192237
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttttt 209  Q
    |||||||||| |||||| ||||    |||||||||| |||||||||||||||    || ||| ||||| |||||||  |||| |||||||||||||||||    
T  55192118 ggcttaattacacttttagtccccgcattttgaccagctcacgaaaatggtctcgcctctttcaaatcaaacaaaaccgtccataaactatatgtttttt 55192217  T
Q  210 gcaattttagtcctatctcc 229  Q
    | | ||||||||||| ||||    
T  55192218 gtagttttagtcctacctcc 55192237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 224
Target Start/End: Original strand, 37075687 - 37075803
Alignment:
Q  111 gcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttttt- 209  Q
    ||||||||| ||||||||||     ||||||||||||||||||||||||||||  || ||| ||||| ||||||   |||| |||||||||||||||||     
T  37075687 gcttaattacacttttggtctccgcattttgaccaactcacgaaaatggtcctgcctctttcaaatcaaacaaacccgtccctaaactatatgttttttt 37075786  T
Q  210 --gcaattttagtccta 224  Q
      ||| |||||||||||    
T  37075787 ttgcagttttagtccta 37075803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 224
Target Start/End: Original strand, 50900534 - 50900647
Alignment:
Q  112 cttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgtttttt- 209  Q
    |||||||| |||||||||| |   ||||||| || |||||||||||||||||| || ||| |||||||||||||  |||| |||||||| |||||||||     
T  50900534 cttaattaaacttttggtcttcaaattttgatcagctcacgaaaatggtcctaactctttcaaatcgaacaaaaccgtcc-taaactatcatgttttttc 50900632  T
Q  210 gcaattttagtccta 224  Q
    ||| |||||||||||    
T  50900633 gcagttttagtccta 50900647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 209
Target Start/End: Complemental strand, 8874205 - 8874133
Alignment:
Q  137 ttttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttttt 209  Q
    ||||||||| |||||||||||||||||   | |||||||||||||||||   ||| |||||||||||||||||    
T  8874205 ttttgaccagctcacgaaaatggtcctgcttcttttaaatcgaacaaaaccttccctaaactatatgtttttt 8874133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 27199705 - 27199801
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttttt 209  Q
    ||||||| | ||||||||||   |||||||||| ||||||||||||||| |  || ||| |||||||||||||  |||  |||||||||||||||||    
T  27199705 ttaattacatttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtcactaaactatatgtttttt 27199801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 221
Target Start/End: Complemental strand, 37076219 - 37076109
Alignment:
Q  111 gcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgtttttt 209  Q
    ||||||||| | ||||||||||   ||||||| || ||||||||||||||||   || ||| |||||||||||||| |||| |||||||| |||||||||    
T  37076219 gcttaattacatttttggtcctcgcattttgatcagctcacgaaaatggtcccgcctctttcaaatcgaacaaaatcgtcc-taaactatcatgtttttt 37076121  T
Q  210 gcaattttagtc 221  Q
     || ||||||||    
T  37076120 acatttttagtc 37076109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 229
Target Start/End: Complemental strand, 5137527 - 5137406
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgtttt 207  Q
    ||||||||||| ||||||||||||  | ||||| || ||||| |||| |||| ||  | |||| |||| ||||||||| |||||| || ||| || |||     
T  5137527 aggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgcccttttaaaatagaacaaaatggtccttcaattatcatttttg 5137428  T
Q  208 ttgcaattttagtcctatctcc 229  Q
    ||||| ||||||||||||||||    
T  5137427 ttgcatttttagtcctatctcc 5137406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 185
Target Start/End: Original strand, 20840559 - 20840635
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaa 185  Q
    ||||||||||| ||||||||||||  | ||||| || |||||||||| |||||||  |||||| |||| ||||||||    
T  20840559 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaatagaacaaaa 20840635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 23644460 - 23644515
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcct 163  Q
    |||||||||||| ||||||||||||  ||||||| || |||||||||| |||||||    
T  23644460 aaggcttaattacacttttggtcctcgtattttggcctactcacgaaattggtcct 23644515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 185
Target Start/End: Complemental strand, 23645010 - 23644935
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaa 185  Q
    |||||||||||||||||||||||  | ||||| || |||||||||| |||||||| | |||| |||  ||||||||    
T  23645010 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcctacccttttaaaacagaacaaaa 23644935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 163
Target Start/End: Original strand, 30104481 - 30104535
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcct 163  Q
    ||||||||||| ||||||||||||  | |||||||| |||||||||| |||||||    
T  30104481 aggcttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcct 30104535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 190
Target Start/End: Complemental strand, 25612519 - 25612442
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtc 190  Q
    ||||||| ||||||||||||  | |||||||| |||||||||| |||||||  | |||| |||| |||||||| ||||    
T  25612519 ttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtc 25612442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 163
Target Start/End: Original strand, 27393657 - 27393714
Alignment:
Q  106 ttaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcct 163  Q
    |||||||||||||| ||||||||||||  | |||||||| |||||| ||| |||||||    
T  27393657 ttaaggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcct 27393714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 229
Target Start/End: Complemental strand, 30098317 - 30098188
Alignment:
Q  101 taaaattaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat 200  Q
    ||||| ||||||||||||| ||||||||||||  | |||||||  |||||||||| ||||| |  | |||| |||  ||||||||| |||||| || |||    
T  30098317 taaaaataaggcttaattacacttttggtcctcgtgttttgacatactcacgaaactggtcttgcccttttaaaacagaacaaaatggtccttcaattat 30098218  T
Q  201 -atgttttttgcaattttagtcctatctcc 229  Q
     || ||| ||||| |||| |||||| ||||    
T  30098217 catttttgttgcatttttcgtcctacctcc 30098188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 193
Target Start/End: Original strand, 39555576 - 39555661
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtcctt 193  Q
    |||||||||||| ||||||||||||  | ||||| || |||||||||| |||||||  | |||| |||  ||||||||| ||||||    
T  39555576 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaatggtcctt 39555661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 114; Significance: 6e-58; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 108 - 237
Target Start/End: Complemental strand, 38008499 - 38008370
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttt 207  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  38008499 aaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 38008400  T
Q  208 ttgcaattttagtcctatctccctatttcc 237  Q
    ||||| ||||||||||||||||||||||||    
T  38008399 ttgcagttttagtcctatctccctatttcc 38008370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 108 - 237
Target Start/End: Original strand, 11539635 - 11539765
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg-ttt 206  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| |||    
T  11539635 aaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaatcgtccttaaactatatgtttt 11539734  T
Q  207 tttgcaattttagtcctatctccctatttcc 237  Q
    |||||| ||||||||||||||||||||||||    
T  11539735 tttgcagttttagtcctatctccctatttcc 11539765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 108 - 237
Target Start/End: Original strand, 20127734 - 20127864
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg-ttt 206  Q
    |||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||    
T  20127734 aaggcttaattacacttttggtcctaccattttgaccaattcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 20127833  T
Q  207 tttgcaattttagtcctatctccctatttcc 237  Q
    |||||| ||||||||||||||||||||||||    
T  20127834 tttgcagttttagtcctatctccctatttcc 20127864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 108 - 237
Target Start/End: Complemental strand, 4809427 - 4809298
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttt 207  Q
    |||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||| |||||||||| ||||||| | ||||||||||||||||||||    
T  4809427 aaggcttaattacacttttggtcctaccattttgactaactcacgaaaatggtcctatgttttttaaattgaacaaagtcgtccttaaactatatgtttt 4809328  T
Q  208 ttgcaattttagtcctatctccctatttcc 237  Q
    ||||| ||||||||||||||||||||||||    
T  4809327 ttgcagttttagtcctatctccctatttcc 4809298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 109 - 237
Target Start/End: Complemental strand, 33921159 - 33921030
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg-tttt 207  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||| ||||    
T  33921159 aggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaactaaatgttttt 33921060  T
Q  208 ttgcaattttagtcctatctccctatttcc 237  Q
    ||||| ||||||||||||||||||||||||    
T  33921059 ttgcagttttagtcctatctccctatttcc 33921030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 109 - 237
Target Start/End: Original strand, 62956 - 63084
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    ||||||||||| |||| ||||||| | ||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||    
T  62956 aggcttaattacacttatggtccttccattttgaccaactcacgaaaatggtcctacctttttaaaatcgaacaaaatcgtccttaaactatatgttttt 63055  T
Q  209 tgcaattttagtcctatctccctatttcc 237  Q
    |||| ||||||||||||||||||||||||    
T  63056 tgcagttttagtcctatctccctatttcc 63084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 108 - 237
Target Start/End: Complemental strand, 43160559 - 43160429
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtt-t 206  Q
    |||||||||||| ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |    
T  43160559 aaggcttaattacactttaggtcctaccattttgacaaactcacgaaaatggtcctatcttttttaaatcgaactaaatcgtccttaaactatatgtttt 43160460  T
Q  207 tttgcaattttagtcctatctccctatttcc 237  Q
    |||||| ||||||||||||||||||||||||    
T  43160459 tttgcagttttagtcctatctccctatttcc 43160429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 108 - 237
Target Start/End: Original strand, 16952933 - 16953064
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg--tt 205  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||  ||    
T  16952933 aaggcttaattatacttttggtcctaccattttgaccaactcacgaaaattgtcttatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 16953032  T
Q  206 ttttgcaattttagtcctatctccctatttcc 237  Q
    ||||||  |||||||| |||||||||||||||    
T  16953033 ttttgcggttttagtcatatctccctatttcc 16953064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 108 - 237
Target Start/End: Original strand, 17060904 - 17061035
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg--tt 205  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||  ||    
T  17060904 aaggcttaattatacttttggtcctaccattttgaccaactcacgaaaattgtcttatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 17061003  T
Q  206 ttttgcaattttagtcctatctccctatttcc 237  Q
    ||||||  |||||||| |||||||||||||||    
T  17061004 ttttgcggttttagtcatatctccctatttcc 17061035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 102 - 220
Target Start/End: Original strand, 5560043 - 5560161
Alignment:
Q  102 aaaattaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactata 201  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||    
T  5560043 aaaattaaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaattgaacaaaatcgtccttaaactata 5560142  T
Q  202 tgttttttgcaattttagt 220  Q
    | ||||||||| |||||||    
T  5560143 tattttttgcagttttagt 5560161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 108 - 237
Target Start/End: Original strand, 6949449 - 6949579
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg-ttt 206  Q
    |||||||||||| | |||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||    
T  6949449 aaggcttaattacatttttggtcctatcattttgactaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcctttaactatatgtttt 6949548  T
Q  207 tttgcaattttagtcctatctccctatttcc 237  Q
    |||||| ||||||||||||||||||||||||    
T  6949549 tttgcagttttagtcctatctccctatttcc 6949579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 110 - 236
Target Start/End: Original strand, 42192240 - 42192366
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttttt 209  Q
    |||||||||| ||||||||||||   ||||||||||||||||||||||||||||| || |||||||||||||||||| |||| |||||||||||||||||    
T  42192240 ggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt 42192339  T
Q  210 gcaattttagtcctatctccctatttc 236  Q
    ||| |||||||||||||||||||||||    
T  42192340 gcagttttagtcctatctccctatttc 42192366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 109 - 237
Target Start/End: Complemental strand, 4356303 - 4356175
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    ||||||||||| |||||||||||||  |||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  4356303 aggcttaattacacttttggtcctatcattttgaccaactcacgataatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 4356204  T
Q  209 tgcaattttagtcctatctccctatttcc 237  Q
    |||| ||||| | |||| |||||||||||    
T  4356203 tgcagttttaattctatttccctatttcc 4356175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 109 - 237
Target Start/End: Complemental strand, 20128284 - 20128156
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    ||||||||||| ||||||||||||   ||||| |||||||||||||| |||||||| || ||||||||| |||||||| |||||||||||||||||||||    
T  20128284 aggcttaattacacttttggtccttgcatttttaccaactcacgaaattggtcctacctcttttaaatcaaacaaaatcgtccttaaactatatgttttt 20128185  T
Q  209 tgcaattttagtcctatctccctatttcc 237  Q
    |||||||||||||||||||||||||||||    
T  20128184 tgcaattttagtcctatctccctatttcc 20128156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 109 - 237
Target Start/End: Original strand, 44219643 - 44219771
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    ||||||||||| |||||||||||| | ||||||| |||||||| |||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  44219643 aggcttaattacacttttggtccttccattttgatcaactcacaaaaatgatcctaccttttttaaatcgaacaaaattgtccttaaattatatgttttt 44219742  T
Q  209 tgcaattttagtcctatctccctatttcc 237  Q
    |||| |||||||||||||||||| |||||    
T  44219743 tgcagttttagtcctatctccctgtttcc 44219771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 113 - 237
Target Start/End: Original strand, 13315496 - 13315623
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg---tttttt 209  Q
    ||||||| |||||| ||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||   ||||||    
T  13315496 ttaattacactttttgtcctaccattttgaccaactcatgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttttt 13315595  T
Q  210 gcaattttagtcctatctccctatttcc 237  Q
    ||| ||||||||||||||||||||||||    
T  13315596 gcagttttagtcctatctccctatttcc 13315623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 109 - 237
Target Start/End: Complemental strand, 11540185 - 11540057
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    |||||||||||||||||||||| |   ||||||||||||||||||||||||||||| || |||||||||||||||||| |||| ||||||||||||||||    
T  11540185 aggcttaattatacttttggtcatcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgttttt 11540086  T
Q  209 tgcaattttagtcctatctccctatttcc 237  Q
    |||| |||||||| ||| |||||||||||    
T  11540085 tgcagttttagtcatatatccctatttcc 11540057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 109 - 237
Target Start/End: Complemental strand, 13399966 - 13399839
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    ||||||||||  | |||| ||||||| |||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||| |||||    
T  13399966 aggcttaattgcaattttagtcctaccattttgaccaactcacgaaaatggtc-tatttcttttaaatcgaacaaaattgtccttaaactatatattttt 13399868  T
Q  209 tgcaattttagtcctatctccctatttcc 237  Q
    |||| |||||||| |||||||||||||||    
T  13399867 tgcagttttagtcatatctccctatttcc 13399839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 111 - 237
Target Start/End: Complemental strand, 16953479 - 16953353
Alignment:
Q  111 gcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttg 210  Q
    ||||||||| ||||||||||||   ||||||||||||||| |||| |||||||| || ||||||||||||||||| ||||| |||| |||||||||||||    
T  16953479 gcttaattacacttttggtccttgcattttgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaaatgtccctaaagtatatgttttttg 16953380  T
Q  211 caattttagtcctatctccctatttcc 237  Q
    || ||||||||||||||||||||||||    
T  16953379 cagttttagtcctatctccctatttcc 16953353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 110 - 235
Target Start/End: Original strand, 4355755 - 4355880
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttttt 209  Q
    |||||||||| ||||||||||||   ||||||||| |||||||||| ||||| || || |||||||||||||||||| |||| |||||||||||||||||    
T  4355755 ggcttaattacacttttggtccttgcattttgacctactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt 4355854  T
Q  210 gcaattttagtcctatctccctattt 235  Q
    ||| ||||||||||||||||||||||    
T  4355855 gcagttttagtcctatctccctattt 4355880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 113 - 237
Target Start/End: Complemental strand, 15551218 - 15551093
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtt-ttttgc 211  Q
    ||||||| |||||||| ||||| |||||||||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||  |||||||| ||||||    
T  15551218 ttaattacacttttggccctaccattttgaccaactcacaaaaatggtcatatattttttaaatcgaacaaaatcgtccttaagttatatgtttttttgc 15551119  T
Q  212 aattttagtcctatctccctatttcc 237  Q
    | ||||||||||||||||||||||||    
T  15551118 agttttagtcctatctccctatttcc 15551093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 109 - 237
Target Start/End: Original strand, 38007949 - 38008078
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg-tttt 207  Q
    ||||||||||| ||||||||||||   |||||||||||||||||||| |||||||| || |||||||||||||||||| |||| ||||||||||| ||||    
T  38007949 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttt 38008048  T
Q  208 ttgcaattttagtcctatctccctatttcc 237  Q
    ||||| |||||||| |||||||||||||||    
T  38008049 ttgcagttttagtcatatctccctatttcc 38008078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 97 - 237
Target Start/End: Complemental strand, 42192802 - 42192661
Alignment:
Q  97 ctcataaaattaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaa 196  Q
    |||| ||||| |||||||||||| ||||||||||||   ||||||||||||||||||||||||||||| || |||||||||||||||||| |||| ||||    
T  42192802 ctcaaaaaataaaggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaa 42192703  T
Q  197 ctatatg-ttttttgcaattttagtcctatctccctatttcc 237  Q
    ||| ||| ||||||||| |||||||| |||| ||||||||||    
T  42192702 ctagatgtttttttgcagttttagtcatatccccctatttcc 42192661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 109 - 237
Target Start/End: Complemental strand, 32418693 - 32418565
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    |||||||||||||||||||||||||  ||||||||||| |||||||| || | ||| || |||||||||||||||||| ||||||||||||||| |||||    
T  32418693 aggcttaattatacttttggtcctatcattttgaccaattcacgaaattgattctacctcttttaaatcgaacaaaatcgtccttaaactatatattttt 32418594  T
Q  209 tgcaattttagtcctatctccctatttcc 237  Q
    |||| ||||| || |||||||||||||||    
T  32418593 tgcagttttaatcttatctccctatttcc 32418565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 99 - 237
Target Start/End: Original strand, 649516 - 649654
Alignment:
Q  99 cataaaattaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaact 198  Q
    |||||||  |||||||||||| ||||||||||||   || |||||||||| |||||| |||||||| || |||||||||||||||||| |||| ||||||    
T  649516 cataaaaacaaggcttaattacacttttggtccttgcatcttgaccaacttacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaact 649615  T
Q  199 atatgttttttgcaattttagtcctatctccctatttcc 237  Q
    |||||||||||||| ||||||| || |||||||||||||    
T  649616 atatgttttttgcagttttagttctgtctccctatttcc 649654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 109 - 237
Target Start/End: Complemental strand, 16175897 - 16175768
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtt-tt 207  Q
    |||| |||||| ||||||||||||   ||||| |||||||||||||| ||||| || || |||||||||||||||||| |||||||||||||||||| ||    
T  16175897 aggcataattacacttttggtccttacatttttaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccttaaactatatgttttt 16175798  T
Q  208 ttgcaattttagtcctatctccctatttcc 237  Q
    ||||| ||||||||||||||||||||||||    
T  16175797 ttgcagttttagtcctatctccctatttcc 16175768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 109 - 237
Target Start/End: Complemental strand, 43216256 - 43216128
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    ||||||||||| |||||| |||||    ||||||||||||||||||| |||||||| || |||||||||||||||||| |||| |||||||||| |||||    
T  43216256 aggcttaattacacttttagtccttgcgttttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatattttt 43216157  T
Q  209 tgcaattttagtcctatctccctatttcc 237  Q
    |||| ||||||||||||||| ||||||||    
T  43216156 tgcagttttagtcctatctctctatttcc 43216128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 108 - 230
Target Start/End: Complemental strand, 44220193 - 44220071
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttt 207  Q
    |||||||||||| |||||| |||||   |||||||||||||||||||||||||| || |||||||||||| |||||||| |||| |||||||||||||||    
T  44220193 aaggcttaattacactttttgtcctcgcattttgaccaactcacgaaaatggtcataccttttttaaatcaaacaaaatcgtccctaaactatatgtttt 44220094  T
Q  208 ttgcaattttagtcctatctccc 230  Q
    ||| | |||||||| ||||||||    
T  44220093 ttgtagttttagtcatatctccc 44220071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 101 - 237
Target Start/End: Original strand, 32418150 - 32418284
Alignment:
Q  101 taaaattaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat 200  Q
    ||||||||||||||||||| |||| |||||||   |||||||||||||||||||| |||||||| || |||  ||||||||||||| |||| ||||||||    
T  32418150 taaaattaaggcttaattacacttatggtccttgcattttgaccaactcacgaaattggtcctacctcttt--aatcgaacaaaatcgtccctaaactat 32418247  T
Q  201 atgttttttgcaattttagtcctatctccctatttcc 237  Q
    || ||||||||| |||||||| ||||||| |||||||    
T  32418248 atattttttgcagttttagtcatatctccttatttcc 32418284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 113 - 237
Target Start/End: Complemental strand, 63507 - 63377
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtt------t 206  Q
    ||||||||| ||||||||||  ||||||||||||||||||||||||||| ||||| ||||||||| |||||||| |||| |||||||||||||      |    
T  63507 ttaattatatttttggtccttgtattttgaccaactcacgaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactatatgttttttttt 63408  T
Q  207 tttgcaattttagtcctatctccctatttcc 237  Q
    |||||| |||||||||||||| |||||||||    
T  63407 tttgcagttttagtcctatcttcctatttcc 63377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 113 - 235
Target Start/End: Original strand, 33920615 - 33920737
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgca 212  Q
    ||||||| | ||||||||||   |||||||||||||||||||| || || || || |||||||||||||||||| |||| ||||||||||| ||||||||    
T  33920615 ttaattacatttttggtccttgcattttgaccaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatgatttttgca 33920714  T
Q  213 attttagtcctatctccctattt 235  Q
     ||||||||||||||||||||||    
T  33920715 gttttagtcctatctccctattt 33920737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 136 - 237
Target Start/End: Original strand, 4808905 - 4809006
Alignment:
Q  136 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgcaattttagtcctatctccctattt 235  Q
    |||||||||||||||||||| || ||||| || |||||||||||||||||| |||| |||||||||||||||||| | |||||||||||||| |||||||    
T  4808905 attttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccataaactatatgttttttgtagttttagtcctatcttcctattt 4809004  T
Q  236 cc 237  Q
    ||    
T  4809005 cc 4809006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 113 - 235
Target Start/End: Original strand, 15550676 - 15550799
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg-ttttttgc 211  Q
    ||||||| ||||||| ||||   ||| |||||||||||||||| |||||||| || |||||||||||||||||| |||| ||||||||||| ||||||||    
T  15550676 ttaattacacttttgatccttgcattctgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttgc 15550775  T
Q  212 aattttagtcctatctccctattt 235  Q
    | |||||||||||| |||||||||    
T  15550776 agttttagtcctatttccctattt 15550799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 110 - 236
Target Start/End: Complemental strand, 6949990 - 6949862
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactata--tgtttt 207  Q
    |||||||||| ||||||||||||   |||||||||||||||||||| ||||||||  | |||||||| ||||||||| |||| |||||||||  | ||||    
T  6949990 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacatcttttaaatagaacaaaatcgtccctaaactatatttttttt 6949891  T
Q  208 ttgcaattttagtcctatctccctatttc 236  Q
    ||||| |||||||||||||||| ||||||    
T  6949890 ttgcagttttagtcctatctccatatttc 6949862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 108 - 229
Target Start/End: Complemental strand, 31797325 - 31797204
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttt 207  Q
    |||||||||||| ||||||||||||   |||||||||| ||||||||||||||| |  || ||| |||||||||||||  |||| |||||||||||||||    
T  31797325 aaggcttaattacacttttggtcctcacattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaactatatgtttt 31797226  T
Q  208 ttgcaattttagtcctatctcc 229  Q
    ||||| ||||||||||| ||||    
T  31797225 ttgcagttttagtcctacctcc 31797204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 112 - 192
Target Start/End: Complemental strand, 649881 - 649801
Alignment:
Q  112 cttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtcct 192  Q
    |||||||| |||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  649881 cttaattacacttttggtcctatcattttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaatcgtcct 649801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 113 - 235
Target Start/End: Complemental strand, 9330338 - 9330215
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtt-ttttgc 211  Q
    ||||||| ||||||||||||   |||||||||||||||||||| | ||| || || |||||||||||||||||| ||||  |||||||||||| ||||||    
T  9330338 ttaattacacttttggtccttgcattttgaccaactcacgaaatttgtcatacctcttttaaatcgaacaaaatcgtccccaaactatatgtttttttgc 9330239  T
Q  212 aattttagtcctatctccctattt 235  Q
    | |||||||||||||| |||||||    
T  9330238 agttttagtcctatctacctattt 9330215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 13399454 - 13399549
Alignment:
Q  142 accaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgcaattttagtcctatctccctatttcc 237  Q
    ||||| |||||||| ||||| || || |||||||| ||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  13399454 accaattcacgaaattggtcatacctcttttaaatggaacaaaatcgtccctaaactatatgttttttgcagttttagtcctatctccctatttcc 13399549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 109 - 237
Target Start/End: Complemental strand, 24140221 - 24140098
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    ||||||||||| ||||||| ||||   || |||||||||||||||||||||||||| |||||||||||| |||||||| |||| |||||||||     ||    
T  24140221 aggcttaattacacttttgttcctcgcatcttgaccaactcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtccataaactata-----tt 24140127  T
Q  209 tgcaattttagtcctatctccctatttcc 237  Q
    |||| ||||||| |||| |||||||||||    
T  24140126 tgcagttttagttctatatccctatttcc 24140098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 113 - 235
Target Start/End: Original strand, 43160012 - 43160135
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactata-tgttttttgc 211  Q
    ||||||| | ||||||||||   ||||||| |||||||||||| ||||| || || |||||||||||||||||| |||| |||||||||   ||||||||    
T  43160012 ttaattacatttttggtccttgcattttgatcaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatacatttttttgc 43160111  T
Q  212 aattttagtcctatctccctattt 235  Q
    | ||||||||||||||||||||||    
T  43160112 agttttagtcctatctccctattt 43160135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 109 - 221
Target Start/End: Complemental strand, 25336147 - 25336034
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatat-gtttt 207  Q
    ||||||||||| ||||||||||||   |||||||||||||||||||| ||||||||  | |||||||||||||||||| |||| |||| |||||  ||||    
T  25336147 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacttcttttaaatcgaacaaaatcgtccctaaattatatattttt 25336048  T
Q  208 ttgcaattttagtc 221  Q
    ||||| ||||||||    
T  25336047 ttgcagttttagtc 25336034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 109 - 224
Target Start/End: Complemental strand, 28143576 - 28143461
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgtttt 207  Q
    ||||||||||  ||||||||||||   |||||||||| |||||||||||||||||  || ||| |||||||||||||| |||| |||||||| ||| |||    
T  28143576 aggcttaatttcacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcaaatcgaacaaaatcgtccctaaactatcatg-ttt 28143478  T
Q  208 ttgcaattttagtccta 224  Q
    ||||| |||||||||||    
T  28143477 ttgcagttttagtccta 28143461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 113 - 172
Target Start/End: Original strand, 9329915 - 9329974
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatctttttt 172  Q
    ||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  9329915 ttaattacacttttggtcctacaattttgaccaactcacaaaaatggtcctatctttttt 9329974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 109 - 224
Target Start/End: Complemental strand, 14942393 - 14942275
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atg--tt 205  Q
    ||||||||||| |||||||||| |   |||||||||| ||||||||||||||| | ||| ||| ||||||||||||||||||| |||| ||| |||  ||    
T  14942393 aggcttaattacacttttggtcttcgcattttgaccagctcacgaaaatggtcttgtctctttcaaatcgaacaaaattgtccataaattatcatgtttt 14942294  T
Q  206 ttttgcaattttagtccta 224  Q
    ||||||| |||||||||||    
T  14942293 ttttgcagttttagtccta 14942275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 183 - 237
Target Start/End: Complemental strand, 5561023 - 5560969
Alignment:
Q  183 aaattgtccttaaactatatgttttttgcaattttagtcctatctccctatttcc 237  Q
    |||| |||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  5561023 aaatcgtccctaaactatatgttttttgcagttttagtcctatctccctatttcc 5560969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 220
Target Start/End: Complemental strand, 3824256 - 3824143
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgttt 206  Q
    |||| |||||||||||||||||| |   ||||| |||||||||||||| ||||| |  | ||||||||||||||||||  || | ||  |||| ||||||    
T  3824256 aaggtttaattatacttttggtcatcgcattttaaccaactcacgaaattggtcatgccctttttaaatcgaacaaaacagttcatatgctatcatgttt 3824157  T
Q  207 tttgcaattttagt 220  Q
    ||||||||||||||    
T  3824156 tttgcaattttagt 3824143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 218
Target Start/End: Original strand, 5035903 - 5035972
Alignment:
Q  150 acgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgttttttgcaatttta 218  Q
    |||||||||||||| |||||||||||||||||||||  |||| |||||||| || ||||||||| |||||    
T  5035903 acgaaaatggtcctgtcttttttaaatcgaacaaaaccgtccctaaactatcatattttttgcagtttta 5035972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 193
Target Start/End: Original strand, 35779708 - 35779791
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtcctt 193  Q
    |||||||||| ||||||||||||  | |||||||  ||||||||||||||||||  | |||| |||  ||||||||||||||||    
T  35779708 ggcttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgccattttaaaacagaacaaaattgtcctt 35779791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 224
Target Start/End: Complemental strand, 2190596 - 2190506
Alignment:
Q  136 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atg-ttttttgcaattttagtccta 224  Q
    |||||||||| ||||||||| |||||||  |||||| |||||||||||||| |||| |||| ||| | | ||||||||| |||||||||||    
T  2190596 attttgaccagctcacgaaattggtcctgcctttttcaaatcgaacaaaatcgtccctaaattatcacgcttttttgcagttttagtccta 2190506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 97 - 163
Target Start/End: Original strand, 20444736 - 20444802
Alignment:
Q  97 ctcataaaattaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcct 163  Q
    |||||||||  |||||||||||| ||||||||||||  | ||||| ||||||||||||| |||||||    
T  20444736 ctcataaaagaaaggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcct 20444802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 217
Target Start/End: Original strand, 20495219 - 20495301
Alignment:
Q  136 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgttttttgcaatttt 217  Q
    ||||||||||||||||||||||| || |  || ||||||||| |||||||| |||| |||||||| || ||||||||| ||||    
T  20495219 attttgaccaactcacgaaaatgatcatgcctcttttaaatctaacaaaatcgtccctaaactatcatattttttgcactttt 20495301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 144
Target Start/End: Original strand, 17023598 - 17023634
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgacc 144  Q
    ||||||||||||||||||||||||||| |||||||||    
T  17023598 aaggcttaattatacttttggtcctaccattttgacc 17023634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 193
Target Start/End: Complemental strand, 28617167 - 28617076
Alignment:
Q  102 aaaattaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtcctt 193  Q
    ||||| |||||||||||| ||||||||||||  | ||||| || |||||||||| |||| || || |||| |||  ||||||||| ||||||    
T  28617167 aaaatgaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgtccttttaaaacagaacaaaatggtcctt 28617076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 229
Target Start/End: Original strand, 18450828 - 18450950
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgttt 206  Q
    |||||||||||| ||||||||||||  | ||||| || |||||||||| ||||||   | |||| |||  ||||||||  |||||| || ||| || |||    
T  18450828 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtccagcccttttaaaacagaacaaaacggtccttcaattatcattttt 18450927  T
Q  207 tttgcaattttagtcctatctcc 229  Q
    |||||| ||||||||||| ||||    
T  18450928 tttgcatttttagtcctacctcc 18450950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 163
Target Start/End: Complemental strand, 20440577 - 20440523
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcct 163  Q
    ||||||||||| ||||||||||||  | ||||| ||||||||||||| |||||||    
T  20440577 aggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcct 20440523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 112; Significance: 9e-57; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 108 - 235
Target Start/End: Complemental strand, 7733035 - 7732908
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttt 207  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7733035 aaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 7732936  T
Q  208 ttgcaattttagtcctatctccctattt 235  Q
    ||||||||||||||||||||||||||||    
T  7732935 ttgcaattttagtcctatctccctattt 7732908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 113 - 237
Target Start/End: Complemental strand, 25637741 - 25637617
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgca 212  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25637741 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 25637642  T
Q  213 attttagtcctatctccctatttcc 237  Q
     ||||||||||||||||||||||||    
T  25637641 gttttagtcctatctccctatttcc 25637617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 112 - 237
Target Start/End: Original strand, 9181534 - 9181659
Alignment:
Q  112 cttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgc 211  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  9181534 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatattttttttgc 9181633  T
Q  212 aattttagtcctatctccctatttcc 237  Q
    | ||||||||||||||||||||||||    
T  9181634 agttttagtcctatctccctatttcc 9181659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 111 - 237
Target Start/End: Original strand, 15712366 - 15712492
Alignment:
Q  111 gcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttg 210  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  15712366 gcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatattttttg 15712465  T
Q  211 caattttagtcctatctccctatttcc 237  Q
     | ||||||||||||||||||||||||    
T  15712466 tagttttagtcctatctccctatttcc 15712492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 108 - 237
Target Start/End: Original strand, 16081297 - 16081426
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttt 207  Q
    |||||||||||| |||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  16081297 aaggcttaattacacttttggtccttctattttgaccaactcatggaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatttgtttt 16081396  T
Q  208 ttgcaattttagtcctatctccctatttcc 237  Q
    ||||| |||||||||||||| |||||||||    
T  16081397 ttgcagttttagtcctatctacctatttcc 16081426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 112 - 237
Target Start/End: Complemental strand, 27245748 - 27245623
Alignment:
Q  112 cttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgc 211  Q
    ||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||    
T  27245748 cttaattatacttttggtcttaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaattatatgtattttgc 27245649  T
Q  212 aattttagtcctatctccctatttcc 237  Q
    |||||||||| |||||||||||||||    
T  27245648 aattttagtcatatctccctatttcc 27245623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 109 - 237
Target Start/End: Complemental strand, 48248139 - 48248010
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtt-tt 207  Q
    ||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||    
T  48248139 aggcttaattacacttttggtcctaccattttgaccaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 48248040  T
Q  208 ttgcaattttagtcctatctccctatttcc 237  Q
    ||||| ||||||||| ||||||||||||||    
T  48248039 ttgcagttttagtcccatctccctatttcc 48248010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 108 - 237
Target Start/End: Original strand, 11971332 - 11971465
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttt 207  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  11971332 aaggcttaattatacttttggtcctaccattttgacctactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 11971431  T
Q  208 ttg----caattttagtcctatctccctatttcc 237  Q
    ||     || ||||||||||||||||||||||||    
T  11971432 ttttttacagttttagtcctatctccctatttcc 11971465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 16917712 - 16917833
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||    
T  16917712 aggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttt 16917811  T
Q  209 tgcaattttagtcctatctccc 230  Q
    |||| |||||||| ||||||||    
T  16917812 tgcagttttagtcatatctccc 16917833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 108 - 237
Target Start/End: Original strand, 786780 - 786910
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg-ttt 206  Q
    |||||||||||| ||||||| |||| | |||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||| |||    
T  786780 aaggcttaattacacttttgatccttccattttgaccaactcacgaaaatggtcataccttttttaaatcgaacaaaattttccttaaactatatgtttt 786879  T
Q  207 tttgcaattttagtcctatctccctatttcc 237  Q
    |||||| ||||||||||||||||||||||||    
T  786880 tttgcagttttagtcctatctccctatttcc 786910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 113 - 237
Target Start/End: Original strand, 5745642 - 5745766
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgca 212  Q
    ||||||| |||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||  | ||||||||||||||||||||||    
T  5745642 ttaattacacttttggtcctatcattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatctttcttaaactatatgttttttgca 5745741  T
Q  213 attttagtcctatctccctatttcc 237  Q
     |||||||| |||||||||||||||    
T  5745742 gttttagtcttatctccctatttcc 5745766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 101 - 237
Target Start/End: Complemental strand, 26026873 - 26026737
Alignment:
Q  101 taaaattaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat 200  Q
    ||||||| ||| ||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||   ||||||||||||    
T  26026873 taaaatttaggtttaattacacttttggtcctactattttgacaaattcacgaaaatggtcctatcttttataaatcgaacaaaaccatccttaaactat 26026774  T
Q  201 atgttttttgcaattttagtcctatctccctatttcc 237  Q
    |||||||||||| |||||||  |||||||||||||||    
T  26026773 atgttttttgcagttttagttttatctccctatttcc 26026737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 113 - 237
Target Start/End: Complemental strand, 14311830 - 14311706
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgca 212  Q
    ||||||| |||||| ||| ||| | |||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  14311830 ttaattacactttttgtcgtaccaatttgaccaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaactatatgttttttgca 14311731  T
Q  213 attttagtcctatctccctatttcc 237  Q
     |||||||| |||||||||||||||    
T  14311730 gttttagtcttatctccctatttcc 14311706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 110 - 237
Target Start/End: Original strand, 28687593 - 28687720
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttttt 209  Q
    |||||||||| |||||||||| ||  ||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  28687593 ggcttaattacacttttggtcatatcattttgaccaactcacgaaaatggttctatcttttataaatcgaacaaaatcgtccttaaactatatttttttt 28687692  T
Q  210 gcaattttagtcctatctccctatttcc 237  Q
    ||| || ||||||||||| |||||||||    
T  28687693 gcagttctagtcctatcttcctatttcc 28687720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 7732487 - 7732613
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    ||||||||||| | ||||||||||   ||||||| |||||||||||| |||||||| || |||||||||||||||||| |||||||||||||||||||||    
T  7732487 aggcttaattacatttttggtccttgcattttgatcaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccttaaactatatgttttt 7732586  T
Q  209 tgcaattttagtcctatctccctattt 235  Q
    |||| ||||||||||||||||||||||    
T  7732587 tgcagttttagtcctatctccctattt 7732613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 108 - 237
Target Start/End: Complemental strand, 16081847 - 16081718
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttt 207  Q
    |||||||||||| || |||||||||   |||||||||||||||||||| || ||||| || ||||||||||||||||||  ||| |||||||||||||||    
T  16081847 aaggcttaattacacctttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcatccctaaactatatgtttt 16081748  T
Q  208 ttgcaattttagtcctatctccctatttcc 237  Q
    ||||| ||||||||||||||||||||||||    
T  16081747 ttgcagttttagtcctatctccctatttcc 16081718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 109 - 237
Target Start/End: Original strand, 5333879 - 5334007
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    ||||||||||| ||||||| ||||   |||||||||||||||||||||||||| || || |||||||||||||||||| |||| ||||||||||||||||    
T  5333879 aggcttaattacacttttgatccttgcattttgaccaactcacgaaaatggtcgtacctcttttaaatcgaacaaaatcgtccctaaactatatgttttt 5333978  T
Q  209 tgcaattttagtcctatctccctatttcc 237  Q
    |||| |||||||| |||| ||||||||||    
T  5333979 tgcagttttagtcatatccccctatttcc 5334007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 110 - 237
Target Start/End: Complemental strand, 26048492 - 26048366
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttttt 209  Q
    |||||||||| ||||||| ||||    ||||||||||||||||||| |||||||| || ||||||||| |||||||||||||||||||||||||| ||||    
T  26048492 ggcttaattacacttttgttccttgcgttttgaccaactcacgaaattggtcctacctcttttaaatcaaacaaaattgtccttaaactatatgt-tttt 26048394  T
Q  210 gcaattttagtcctatctccctatttcc 237  Q
    ||| |||||||| |||||||||||||||    
T  26048393 gcagttttagtcatatctccctatttcc 26048366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 106 - 236
Target Start/End: Complemental strand, 2758248 - 2758118
Alignment:
Q  106 ttaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtt 205  Q
    |||||||||||||| ||||||||||||   ||||||  ||||||||||||||||| ||| || |||||||||||||||||| |||| |||||||||||||    
T  2758248 ttaaggcttaattacacttttggtcctcgcattttgttcaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccataaactatatgtt 2758149  T
Q  206 ttttgcaattttagtcctatctccctatttc 236  Q
    |||||||  ||||||| |||| |||||||||    
T  2758148 ttttgcaggtttagtcatatccccctatttc 2758118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 109 - 237
Target Start/End: Original strand, 25637196 - 25637325
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg-tttt 207  Q
    ||||||||||| ||||||||||||   || |||||||||||| |||| |||||||| || |||||||||||||||||| |||| ||||||||||| ||||    
T  25637196 aggcttaattacacttttggtccttgcatattgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttt 25637295  T
Q  208 ttgcaattttagtcctatctccctatttcc 237  Q
    ||| | ||||||||||||||||||||||||    
T  25637296 ttgtagttttagtcctatctccctatttcc 25637325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 111 - 235
Target Start/End: Complemental strand, 39388813 - 39388688
Alignment:
Q  111 gcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtt-tttt 209  Q
    ||||||||| ||||||||||||   |||||||||||||||||||| | |||||| || |||||||||||||||||| |||  ||||||||||||| ||||    
T  39388813 gcttaattacacttttggtccttgcattttgaccaactcacgaaatttgtcctacctcttttaaatcgaacaaaatcgtctctaaactatatgttttttt 39388714  T
Q  210 gcaattttagtcctatctccctattt 235  Q
    ||| ||||||||||||||||||||||    
T  39388713 gcagttttagtcctatctccctattt 39388688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 110 - 237
Target Start/End: Original strand, 27245203 - 27245331
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg-ttttt 208  Q
    |||||||||| ||||||||||||   |||||||||||||||||||| |||||||| || |||||||||||||||||| ||||  |||| ||||| |||||    
T  27245203 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccccaaaccatatgtttttt 27245302  T
Q  209 tgcaattttagtcctatctccctatttcc 237  Q
    |||| |||||||||||||||| |||||||    
T  27245303 tgcagttttagtcctatctccttatttcc 27245331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 113 - 235
Target Start/End: Original strand, 26026320 - 26026443
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg-ttttttgc 211  Q
    ||||||| ||||||||||||  ||||||||||| ||||||||| ||||| || || |||||||||||||||||| |||| ||||||||||| ||||||||    
T  26026320 ttaattacacttttggtccttgtattttgaccagctcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccataaactatatgtttttttgc 26026419  T
Q  212 aattttagtcctatctccctattt 235  Q
    | |||||||| |||||||||||||    
T  26026420 agttttagtcttatctccctattt 26026443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 112 - 222
Target Start/End: Complemental strand, 5334363 - 5334253
Alignment:
Q  112 cttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgc 211  Q
    |||||||| ||||||||||||   |||||||||||||||||||||| |||||| || |||||||||||||||||| |||| |||||||||| ||||||||    
T  5334363 cttaattacacttttggtcctcacattttgaccaactcacgaaaatagtcctacctcttttaaatcgaacaaaatcgtccctaaactatatattttttgc 5334264  T
Q  212 aattttagtcc 222  Q
    | |||||||||    
T  5334263 agttttagtcc 5334253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 26047960 - 26048054
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttt 207  Q
    ||||||| ||||||| | |||| |||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  26047960 ttaattacacttttgattctaccatttcgaccaactcacgaaaatggtcatatcttttttaaatcgaataaaattgtccttaaactatatgtttt 26048054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 123 - 237
Target Start/End: Complemental strand, 28688032 - 28687918
Alignment:
Q  123 ttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgcaattttagtcc 222  Q
    ||||||||||   |||||||||||||||||||| || || || || |||||||||||||||||| |||| |||||||||||||||||||| |||||||||    
T  28688032 ttttggtccttgcattttgaccaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgcacttttagtcc 28687933  T
Q  223 tatctccctatttcc 237  Q
    ||||| |||||||||    
T  28687932 tatcttcctatttcc 28687918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 116 - 237
Target Start/End: Complemental strand, 35161342 - 35161220
Alignment:
Q  116 attatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtt-ttttgcaat 214  Q
    |||| ||||||||||||   ||||||||||||||||| || |||||||| || |||||||||||||||||| |||| ||||||||||||| ||||||| |    
T  35161342 attacacttttggtccttgcattttgaccaactcacggaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttgcagt 35161243  T
Q  215 tttagtcctatctccctatttcc 237  Q
    ||||||| |||||||||||||||    
T  35161242 tttagtcatatctccctatttcc 35161220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 100 - 237
Target Start/End: Original strand, 48247577 - 48247718
Alignment:
Q  100 ataaaattaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaacta 199  Q
    |||||||| ||||||||||| ||||||||||||   ||||||| |||||||||||| |||||||| || ||||||||| |||||||| |||| |||| ||    
T  48247577 ataaaatttaggcttaattacacttttggtccttgcattttgatcaactcacgaaattggtcctacctcttttaaatcaaacaaaatcgtccctaaagta 48247676  T
Q  200 ta----tgttttttgcaattttagtcctatctccctatttcc 237  Q
    ||    | ||||||||| |||||||| |||||||||||||||    
T  48247677 tatattttttttttgcagttttagtcatatctccctatttcc 48247718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 113 - 208
Target Start/End: Complemental strand, 787329 - 787234
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    ||||||| ||||||||| ||  |||||||||||||||||||||||||||||| || |||||||||||||||||| |||| |||||||| |||||||    
T  787329 ttaattacacttttggtgctcgtattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactatttgttttt 787234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 107 - 237
Target Start/End: Complemental strand, 9181961 - 9181828
Alignment:
Q  107 taaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtt- 205  Q
    ||||||||||||| ||||||| ||||   ||||||||||| |||||||| || || || || |||||||||||||||||| |||| |||||||||||||     
T  9181961 taaggcttaattacacttttgatccttgcattttgaccaattcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatgttt 9181862  T
Q  206 --ttttgcaattttagtcctatctccctatttcc 237  Q
      |||| || ||||||||||||||||||||||||    
T  9181861 ttttttccagttttagtcctatctccctatttcc 9181828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 111 - 229
Target Start/End: Complemental strand, 9394274 - 9394157
Alignment:
Q  111 gcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttg 210  Q
    ||||||||| ||||||||||   | |||||||||| ||||| |||||||||||| |||||| |||||||||||||  |||| |||||||||| |||||||    
T  9394274 gcttaattacacttttggtctcgc-attttgaccagctcacaaaaatggtcctacctttttcaaatcgaacaaaaccgtccctaaactatatattttttg 9394176  T
Q  211 caattttagtcctatctcc 229  Q
    || ||||||||||||||||    
T  9394175 cagttttagtcctatctcc 9394157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 237
Target Start/End: Complemental strand, 5746189 - 5746058
Alignment:
Q  107 taaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttt 206  Q
    ||||||||||||| ||||||||||||   |||||||| ||||||||||| || || |  || |||||||||||||||||  |||| ||||||||||||||    
T  5746189 taaggcttaattacacttttggtccttgcattttgactaactcacgaaattgatc-tgcctcttttaaatcgaacaaaaccgtccataaactatatgttt 5746091  T
Q  207 ttt--gcaattttagtcctatctccctatttcc 237  Q
    |||  |||||||||||| |||||||||||||||    
T  5746090 tttttgcaattttagtcttatctccctatttcc 5746058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 110 - 237
Target Start/End: Complemental strand, 24929854 - 24929722
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactata-----tgt 204  Q
    |||||||||| | ||||||||||   |||||||||||||||||||| ||||| || || ||||||||| |||||||| |||| |||||||||     | |    
T  24929854 ggcttaattacatttttggtccttgcattttgaccaactcacgaaattggtcttacctcttttaaatcaaacaaaatcgtccctaaactatatatatttt 24929755  T
Q  205 tttttgcaattttagtcctatctccctatttcc 237  Q
    |||||||| ||||||||||||||||||||||||    
T  24929754 tttttgcagttttagtcctatctccctatttcc 24929722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 106 - 208
Target Start/End: Complemental strand, 34595322 - 34595219
Alignment:
Q  106 ttaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgt 204  Q
    |||||||||||||| ||||||||||||   ||||||||||||||||||||||||||||   | |||||||||||||||||| |||| |||||||| ||||    
T  34595322 ttaaggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctgcatcttttaaatcgaacaaaatcgtccctaaactatcatgt 34595223  T
Q  205 tttt 208  Q
    ||||    
T  34595222 tttt 34595219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 101 - 198
Target Start/End: Complemental strand, 39137088 - 39136991
Alignment:
Q  101 taaaattaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaact 198  Q
    |||||| |||||||||||| ||||||| ||||  ||||||||||  |||||||||||||||||  || |||||||||||||||||| |||| ||||||    
T  39137088 taaaatcaaggcttaattacacttttgatcctcgtattttgacccgctcacgaaaatggtcctgcctcttttaaatcgaacaaaatcgtccataaact 39136991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 113 - 237
Target Start/End: Complemental strand, 11973945 - 11973821
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgca 212  Q
    ||||||| | ||||||||||   ||||||||||||  |||||| |||| ||| || |||||||| ||||||||| |||| |||| || ||| ||||||||    
T  11973945 ttaattacatttttggtccttgcattttgaccaacgtacgaaattggttctacctcttttaaattgaacaaaatcgtccctaaattaaatggtttttgca 11973846  T
Q  213 attttagtcctatctccctatttcc 237  Q
     ||||||| |||||| |||||||||    
T  11973845 gttttagttctatcttcctatttcc 11973821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 201
Target Start/End: Original strand, 35160664 - 35160746
Alignment:
Q  121 acttttggtcctactattttgaccaactcacgaaaatggtccta--tcttttttaaatcgaacaaaattgtccttaaactata 201  Q
    |||||||||||||| |||||||||||||||||||||||||| ||  | ||||||||||||||| |||| || |||||| ||||    
T  35160664 acttttggtcctaccattttgaccaactcacgaaaatggtcatattttttttttaaatcgaactaaatcgttcttaaattata 35160746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 229
Target Start/End: Original strand, 49064023 - 49064153
Alignment:
Q  99 cataaaattaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaact 198  Q
    |||| ||| |||||||||||| ||||||||||||  ||||||||||| ||||||||||||||  |  || ||| |||| |||||||||  ||| ||||||    
T  49064023 catacaataaaggcttaattacacttttggtcctcgtattttgaccagctcacgaaaatggtattgcctctttcaaatagaacaaaatcttccataaact 49064122  T
Q  199 at-atgttttttgcaattttagtcctatctcc 229  Q
    || ||| |||||||| ||||||||||| ||||    
T  49064123 atcatg-tttttgcacttttagtcctaactcc 49064153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 224
Target Start/End: Original strand, 39136685 - 39136800
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgtttt 207  Q
    ||||||||||| ||||||| ||||   |||||||||| |||||||||||||| ||  || ||| |||||||||||||| |||| |||||||| ||| |||    
T  39136685 aggcttaattacacttttgatccttgcattttgaccagctcacgaaaatggttctgactctttcaaatcgaacaaaatcgtccctaaactatcatg-ttt 39136783  T
Q  208 ttgcaattttagtccta 224  Q
     |||| |||||||||||    
T  39136784 atgcacttttagtccta 39136800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 237
Target Start/End: Original strand, 14311317 - 14311443
Alignment:
Q  112 cttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg-ttttttg 210  Q
    |||||||||| ||||||| ||   ||||| |||||||||  ||| ||||  || || |||||||| ||| ||||| |||| ||||||||||| ||||||     
T  14311317 cttaattatatttttggtacttgcattttaaccaactcataaaattggttatacctcttttaaattgaataaaatcgtccctaaactatatgttttttta 14311416  T
Q  211 caattttagtcctatctccctatttcc 237  Q
    || ||||| ||||||||||||||||||    
T  14311417 cagttttaatcctatctccctatttcc 14311443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 229
Target Start/End: Original strand, 4477702 - 4477821
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgttttt 208  Q
    |||||||||| ||| ||| ||||   ||||||||||| |||||||||||||||   || |||||||| ||| ||||| |||| |||||||| ||| ||||    
T  4477702 ggcttaattacactattgatccttacattttgaccaattcacgaaaatggtcccgcctcttttaaattgaataaaatcgtccctaaactatcatg-tttt 4477800  T
Q  209 tgcaattttagtcctatctcc 229  Q
    |||| ||||||||||| ||||    
T  4477801 tgcagttttagtcctacctcc 4477821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 235
Target Start/End: Original strand, 35160892 - 35160927
Alignment:
Q  200 tatgttttttgcaattttagtcctatctccctattt 235  Q
    ||||||||||| ||||||||||||||||||||||||    
T  35160892 tatgttttttgtaattttagtcctatctccctattt 35160927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 221
Target Start/End: Original strand, 45815340 - 45815454
Alignment:
Q  106 ttaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atg- 203  Q
    |||||||||||||| ||||||||||||   |||||||||| ||   |||||||||| |  || ||| |||||||||||||  |||| |||||||| |||     
T  45815340 ttaaggcttaattacacttttggtccttgcattttgaccagct---gaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaactatcatgt 45815436  T
Q  204 ttttttgcaattttagtc 221  Q
    ||||||||| ||||||||    
T  45815437 ttttttgcagttttagtc 45815454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 200
Target Start/End: Complemental strand, 49064267 - 49064176
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat 200  Q
    ||||||||||||||||||| ||||   |||||| |||  |||||||||||||| |  || ||| |||||||||||||| |||  ||||||||    
T  49064267 aggcttaattatacttttgatcctcacattttggccagttcacgaaaatggtcatgactctttcaaatcgaacaaaatcgtcaataaactat 49064176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 229
Target Start/End: Original strand, 9393738 - 9393855
Alignment:
Q  112 cttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgttttttg 210  Q
    |||||||| ||||||| ||||   ||||||| || ||||||||||| ||| |  || ||| |||||||||||||  |||| |||||||| ||||||||||    
T  9393738 cttaattacacttttgatcctcgcattttgatcagctcacgaaaattgtcttgcctctttcaaatcgaacaaaaccgtcc-taaactatcatgttttttg 9393836  T
Q  211 caattttagtcctatctcc 229  Q
    |  ||||||||||| ||||    
T  9393837 ctgttttagtcctacctcc 9393855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 224
Target Start/End: Original strand, 33880633 - 33880735
Alignment:
Q  123 ttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgttttttgcaattttagtc 221  Q
    ||||||||||  ||||||||||| ||||| ||||| || ||  || ||| |||||||||||||  |||| |||| ||| || ||||||||| ||||||||    
T  33880633 ttttggtcctcgtattttgaccagctcacaaaaattgttctgcctctttcaaatcgaacaaaaccgtccctaaattatcatattttttgcacttttagtc 33880732  T
Q  222 cta 224  Q
    |||    
T  33880733 cta 33880735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 163
Target Start/End: Complemental strand, 37787313 - 37787259
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcct 163  Q
    ||||||||||||||||||||||||  | ||||| || |||||||||| |||||||    
T  37787313 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcct 37787259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 175
Target Start/End: Complemental strand, 40669751 - 40669689
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaa 175  Q
    ||||||| ||||||| |||| | ||||||||||||||||||||||| || ||  |||||||||    
T  40669751 ttaattacacttttgatccttccattttgaccaactcacgaaaatgatcatactttttttaaa 40669689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 2658838 - 2658922
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtcctt 193  Q
    ||||||||||| |||||| |||||  | ||||| || |||||||||| |||||||  | |||| |||| ||||||||| ||||||    
T  2658838 aggcttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtcctt 2658922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 35578902 - 35579013
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgttttttgc 211  Q
    ||||||| |||||||||| |   |||||||||| ||||| |||||||||||  |  ||| |||||||||||||  || | |||||||| |||||||||||    
T  35578902 ttaattacacttttggtcattgcattttgaccagctcacaaaaatggtcctgccactttcaaatcgaacaaaaccgt-cataaactatcatgttttttgc 35579000  T
Q  212 aattttagtccta 224  Q
    | ||||| |||||    
T  35579001 agttttaatccta 35579013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 37786756 - 37786820
Alignment:
Q  99 cataaaattaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcct 163  Q
    |||||||| |||||||||||| ||||||||||||  | ||||| || ||| |||||| |||||||    
T  37786756 cataaaataaaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcct 37786820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 109; Significance: 6e-55; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 109 - 237
Target Start/End: Complemental strand, 28290191 - 28290063
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  28290191 aggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcatttttaaatcgaacaaaatcgtccttaaactatatgttttt 28290092  T
Q  209 tgcaattttagtcctatctccctatttcc 237  Q
    |||| ||||||||||||||||||||||||    
T  28290091 tgcagttttagtcctatctccctatttcc 28290063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 109 - 237
Target Start/End: Original strand, 18149732 - 18149860
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    ||||||||||| ||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  18149732 aggcttaattacacttttgatcctaccatttggaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 18149831  T
Q  209 tgcaattttagtcctatctccctatttcc 237  Q
    |||| |||||||||||| |||||||||||    
T  18149832 tgcagttttagtcctatttccctatttcc 18149860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 111 - 237
Target Start/End: Complemental strand, 8419165 - 8419040
Alignment:
Q  111 gcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttg 210  Q
    ||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||    
T  8419165 gcttaattacacttttggtcctaccattttgaccaactcacgaatatggtcctatcttttttaaattgaacaaaatcgtccttaaactatat-ttttttg 8419067  T
Q  211 caattttagtcctatctccctatttcc 237  Q
    || ||||||||||||||||||||||||    
T  8419066 cagttttagtcctatctccctatttcc 8419040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 110 - 237
Target Start/End: Original strand, 19291356 - 19291484
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg-ttttt 208  Q
    |||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  19291356 ggcttaattacacttttggtcctactattttgaacaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 19291455  T
Q  209 tgcaattttagtcctatctccctatttcc 237  Q
    |||| |||||||| ||||||| |||||||    
T  19291456 tgcagttttagtcttatctccttatttcc 19291484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 109 - 236
Target Start/End: Complemental strand, 15029856 - 15029729
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    ||||||||||| |||||||||||| | |||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||    
T  15029856 aggcttaattacacttttggtcctcccattttgaccaactcacgaaaatggtcttaccttttttaaatcgaacaaaatcgtccttaaactatatgttttt 15029757  T
Q  209 tgcaattttagtcctatctccctatttc 236  Q
    |||| ||||||| | |||||||||||||    
T  15029756 tgcagttttagttcgatctccctatttc 15029729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 114 - 237
Target Start/End: Original strand, 38900648 - 38900771
Alignment:
Q  114 taattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgcaa 213  Q
    |||||| ||||||||||||   ||||||||||||||||||||||| ||||| || |||||||||||||||||| |||| |||| |||||||||||||||     
T  38900648 taattacacttttggtcctcgcattttgaccaactcacgaaaatgatcctacctcttttaaatcgaacaaaatcgtccctaaattatatgttttttgcag 38900747  T
Q  214 ttttagtcctatctccctatttcc 237  Q
    ||||||||||||||||||||||||    
T  38900748 ttttagtcctatctccctatttcc 38900771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 99 - 237
Target Start/End: Original strand, 21370675 - 21370821
Alignment:
Q  99 cataaaattaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaact 198  Q
    |||||||| |||| ||||||||| |||| ||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||| ||| |||||||    
T  21370675 cataaaatcaaggtttaattatattttttgtcctactattttgaccaactgacgaaaatggttatatcttttttaaatcgaacaaaatcgtctttaaact 21370774  T
Q  199 a--------tatgttttttgcaattttagtcctatctccctatttcc 237  Q
    |        ||| ||||||||||||||||||||||||||||||||||    
T  21370775 attattttttattttttttgcaattttagtcctatctccctatttcc 21370821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 109 - 237
Target Start/End: Complemental strand, 21371243 - 21371115
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    ||||||||||| ||||||| ||||   |||||||||||||||  ||| |||||||| || ||||||||| |||||||| |||| ||||||||||||||||    
T  21371243 aggcttaattacacttttgatccttgcattttgaccaactcataaaattggtcctacctcttttaaatcaaacaaaatcgtccctaaactatatgttttt 21371144  T
Q  209 tgcaattttagtcctatctccctatttcc 237  Q
    |||||||||||||||||||||||||||||    
T  21371143 tgcaattttagtcctatctccctatttcc 21371115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 110 - 237
Target Start/End: Complemental strand, 38901186 - 38901059
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttttt 209  Q
    |||||||||| |||||||||||| | |||||||| ||  |||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||    
T  38901186 ggcttaattacacttttggtccttccattttgactaaagcacgaaaatggtcctaccctttttaaatcgaacaaaatcgtccttaaactatatgtttttt 38901087  T
Q  210 gcaattttagtcctatctccctatttcc 237  Q
    ||| |||||||  ||||||| |||||||    
T  38901086 gcagttttagttatatctccttatttcc 38901059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 100 - 237
Target Start/End: Complemental strand, 15115647 - 15115514
Alignment:
Q  100 ataaaattaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaacta 199  Q
    ||||||||| |||||||||| ||||||| ||||   ||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||    
T  15115647 ataaaatta-ggcttaattacacttttgatcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccttaaacta 15115549  T
Q  200 tatgttttttgcaattttagtcctatctccctatttcc 237  Q
    ||   |||||||| |||||||| |||| ||||||||||    
T  15115548 ta---tttttgcagttttagtcatatcgccctatttcc 15115514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 109 - 236
Target Start/End: Complemental strand, 4967318 - 4967189
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtt--t 206  Q
    ||||||||||| ||||||||||||   |||||||||||||||| ||||||||| || || |||||||||||||||||| |||| |||||||||||||  |    
T  4967318 aggcttaattacacttttggtcctcacattttgaccaactcacaaaaatggtcttacctcttttaaatcgaacaaaatcgtccctaaactatatgttttt 4967219  T
Q  207 tttgcaattttagtcctatctccctatttc 236  Q
    |||||| |||||||||||| ||||||||||    
T  4967218 tttgcagttttagtcctatatccctatttc 4967189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 109 - 237
Target Start/End: Complemental strand, 18150271 - 18150142
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtt-tt 207  Q
    ||||||||||| |||| || ||||  ||||||||| ||||||||||| |||||||| || ||||||||||||||||||  ||| ||||||||||||| ||    
T  18150271 aggcttaattacacttgtgatccttgtattttgacaaactcacgaaattggtcctacctcttttaaatcgaacaaaatcatccctaaactatatgttttt 18150172  T
Q  208 ttgcaattttagtcctatctccctatttcc 237  Q
    ||||| ||||||||||||||||||||||||    
T  18150171 ttgcagttttagtcctatctccctatttcc 18150142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 108 - 237
Target Start/End: Original strand, 28289682 - 28289811
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttt 207  Q
    |||||||||||| ||||||| ||||   |||||||||||||||||||| | ||| || || |||||||||||||||||| |||| |||| ||||||||||    
T  28289682 aaggcttaattacacttttgatccttgcattttgaccaactcacgaaattagtcatacctcttttaaatcgaacaaaatcgtccctaaattatatgtttt 28289781  T
Q  208 ttgcaattttagtcctatctccctatttcc 237  Q
    || || ||||||||||||||||||||||||    
T  28289782 ttccagttttagtcctatctccctatttcc 28289811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 136 - 237
Target Start/End: Original strand, 39083384 - 39083487
Alignment:
Q  136 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaac--tatatgttttttgcaattttagtcctatctccctat 233  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||  ||||| ||||||||| |||||||| ||||||| |||    
T  39083384 attttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaattgttcttaaactatatatattttttgcagttttagtcatatctccatat 39083483  T
Q  234 ttcc 237  Q
    ||||    
T  39083484 ttcc 39083487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 113 - 237
Target Start/End: Original strand, 4966819 - 4966942
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgca 212  Q
    ||||||| ||||||||||||   |||||||||||||||||||||| || ||  || |||||||||||||||||| |||| |||||||||||||||| |||    
T  4966819 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatagtactgcctcttttaaatcgaacaaaatcgtccctaaactatatgtttttagca 4966918  T
Q  213 attttagtcctatctccctatttcc 237  Q
     |||||||| |||| ||||||||||    
T  4966919 gttttagtcatatc-ccctatttcc 4966942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 113 - 186
Target Start/End: Original strand, 14340401 - 14340474
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaat 186  Q
    ||||||| | |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  14340401 ttaattacatttttggtcctaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaat 14340474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 100 - 237
Target Start/End: Original strand, 5161570 - 5161710
Alignment:
Q  100 ataaaattaaggcttaattatacttttg-gtcctactattttgac-caactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaac 197  Q
    |||||||||||| ||||||||| ||||  ||||||  ||||| |  ||| |||||||||| ||| |||||||||||||||||||||||||||| |||||     
T  5161570 ataaaattaaggtttaattatatttttttgtcctatcatttttaatcaaatcacgaaaattgtcatatcttttttaaatcgaacaaaattgtctttaaat 5161669  T
Q  198 tatatg-ttttttgcaattttagtcctatctccctatttcc 237  Q
    |||||| ||||||||| |||||||| ||||| |||||||||    
T  5161670 tatatgtttttttgcagttttagtcttatcttcctatttcc 5161710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 111 - 237
Target Start/End: Complemental strand, 32697771 - 32697642
Alignment:
Q  111 gcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtt---tt 207  Q
    ||||||||| |||||||||| |   |||||||||||||||||||| |||||||| || |||||||||||||| ||| |||| |||||||||||||   ||    
T  32697771 gcttaattacacttttggtcattgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacagaatcgtccctaaactatatgttttatt 32697672  T
Q  208 ttgcaattttagtcctatctccctatttcc 237  Q
    ||||| |||||||  || ||||||||||||    
T  32697671 ttgcagttttagtgatacctccctatttcc 32697642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 111 - 229
Target Start/End: Original strand, 10721787 - 10721905
Alignment:
Q  111 gcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgtttttt 209  Q
    ||||||||| | ||||||||||   |||||||||| ||||||||||||||| | ||| ||| |||||||||||||| |||| |||||||| |||||||||    
T  10721787 gcttaattacatttttggtcctcacattttgaccagctcacgaaaatggtcttgtctctttcaaatcgaacaaaatcgtcc-taaactatcatgtttttt 10721885  T
Q  210 gcaattttagtcctatctcc 229  Q
    ||| ||||||||||| ||||    
T  10721886 gcagttttagtcctacctcc 10721905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 235
Target Start/End: Complemental strand, 5162089 - 5161989
Alignment:
Q  136 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtt-ttttgcaattttagtcctatctccctatt 234  Q
    ||||||||||||||| || | | ||| || || |||||||||||||||||| |||| |||| |||||||| ||||||||||||||||||||||||| |||    
T  5162089 attttgaccaactcatgagattagtcatacctcttttaaatcgaacaaaatcgtccctaaattatatgtttttttgcaattttagtcctatctcccaatt 5161990  T
Q  235 t 235  Q
    |    
T  5161989 t 5161989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 136 - 237
Target Start/End: Complemental strand, 14340930 - 14340826
Alignment:
Q  136 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactata---tgttttttgcaattttagtcctatctcccta 232  Q
    |||||||||||||||||||| ||||| ||  | |||||||||||||||||| |||| |||||||||   | ||||||| | |||||||||||||||| ||    
T  14340930 attttgaccaactcacgaaattggtcatacatcttttaaatcgaacaaaatcgtccataaactatatatttttttttgtagttttagtcctatctcctta 14340831  T
Q  233 tttcc 237  Q
    |||||    
T  14340830 tttcc 14340826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 100 - 224
Target Start/End: Complemental strand, 20266471 - 20266346
Alignment:
Q  100 ataaaattaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaacta 199  Q
    |||||||| ||| ||||||  ||||||||||||  ||||||||||| || |||||||||||| | ||| ||| |||||||||||||| |||| |||||||    
T  20266471 ataaaatttaggtttaattgcacttttggtcctcgtattttgaccagcttacgaaaatggtcatgtctctttcaaatcgaacaaaatcgtccctaaacta 20266372  T
Q  200 t-atgttttttgcaattttagtccta 224  Q
    | ||| || ||| | |||||||||||    
T  20266371 tcatggttgttgtagttttagtccta 20266346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 109 - 217
Target Start/End: Original strand, 16752581 - 16752689
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    ||||||||||| |||||||||||    |||||||||| |||||||||||| || |   | ||| |||||||||||||| |||| ||||||||||||||||    
T  16752581 aggcttaattacacttttggtccctgcattttgaccagctcacgaaaatgatcatgcttctttcaaatcgaacaaaatcgtccataaactatatgttttt 16752680  T
Q  209 tgcaatttt 217  Q
    |||| ||||    
T  16752681 tgcagtttt 16752689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 109 - 200
Target Start/End: Complemental strand, 22651858 - 22651767
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat 200  Q
    ||||||||||| |||||| |||||   |||||||||| |||||||||||||| ||  |||||| |||||||||||||| |||| ||||||||    
T  22651858 aggcttaattacactttttgtcctcgcattttgaccagctcacgaaaatggttctgcctttttcaaatcgaacaaaatcgtccataaactat 22651767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 111 - 229
Target Start/End: Original strand, 28494845 - 28494963
Alignment:
Q  111 gcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgtttttt 209  Q
    ||||||||| ||||||||||||   ||||||||||  ||| ||||||||| ||  || ||| ||||||||||||| ||||| |||||||| |||||||||    
T  28494845 gcttaattacacttttggtccttacattttgaccagttcaggaaaatggttctgcctctttcaaatcgaacaaaactgtcc-taaactatcatgtttttt 28494943  T
Q  210 gcaattttagtcctatctcc 229  Q
    ||| ||||||||||| ||||    
T  28494944 gcagttttagtcctacctcc 28494963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 229
Target Start/End: Complemental strand, 41834607 - 41834485
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atg-tt 205  Q
    |||||||||||| ||||||||||||   |||||||||| |||||||||||||||||  || ||| | |||||||||||  |||| |||||||| ||| ||    
T  41834607 aaggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcagatcgaacaaaaccgtcc-taaactatcatgttt 41834509  T
Q  206 ttttgcaattttagtcctatctcc 229  Q
    ||||||| ||||||||||| ||||    
T  41834508 ttttgcagttttagtcctacctcc 41834485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 209
Target Start/End: Complemental strand, 27307605 - 27307507
Alignment:
Q  111 gcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttttt 209  Q
    ||||||||| |||||||||||    ||||||||||  ||||||||||||| ||  || ||| |||||||||||||  |||| |||||||||||||||||    
T  27307605 gcttaattagacttttggtccccgcattttgaccagttcacgaaaatggttctccctctttcaaatcgaacaaaaccgtccataaactatatgtttttt 27307507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 191
Target Start/End: Complemental strand, 28495378 - 28495296
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtcc 191  Q
    ||||||||||| ||||||||||    ||||||||||| ||||||||||||||| |  || ||| |||||||||||||||||||    
T  28495378 aggcttaattacacttttggtctccatattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaattgtcc 28495296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 224
Target Start/End: Original strand, 13557018 - 13557106
Alignment:
Q  136 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgttttttgcaattttagtccta 224  Q
    |||||||||| ||||||||||||||| |  || ||| ||||| |||||||| || |||||||||| |||||||||||| |||||||||||    
T  13557018 attttgaccagctcacgaaaatggtcatgcctctttcaaatcaaacaaaatcgt-cttaaactatcatgttttttgcagttttagtccta 13557106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 224
Target Start/End: Original strand, 32305844 - 32305932
Alignment:
Q  136 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgttttttgcaattttagtccta 224  Q
    ||||||| || ||||||||||| || ||| || |||||||||||||||||| |||| |||||||| ||| |||||||| |||||||||||    
T  32305844 attttgatcagctcacgaaaattgttctacctcttttaaatcgaacaaaatcgtccctaaactatcatg-tttttgcagttttagtccta 32305932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 235
Target Start/End: Original strand, 22651347 - 22651470
Alignment:
Q  112 cttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgttttttg 210  Q
    |||||||| | ||||||| ||  ||||||||||| |||||| |||||||| |  || ||||||||| |||||||   |||||||||||| ||| ||||||    
T  22651347 cttaattacatttttggttctcgtattttgaccagctcacggaaatggtcatgcctcttttaaatcaaacaaaaccatccttaaactatcatg-tttttg 22651445  T
Q  211 caattttagtcctatctccctattt 235  Q
    || ||||||||||| |||| |||||    
T  22651446 cagttttagtcctacctccttattt 22651470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 221
Target Start/End: Original strand, 27307053 - 27307172
Alignment:
Q  102 aaaattaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat- 200  Q
    ||||| |||||||||||| ||||||||| ||   ||||||||||||| | |||||||||| | | | ||| |||| |||||||||  ||| ||||||||     
T  27307053 aaaataaaggcttaattacacttttggttctcgcattttgaccaacttatgaaaatggtcatgtttctttcaaattgaacaaaatcatcc-taaactatc 27307151  T
Q  201 atgttttttgcaattttagtc 221  Q
    |||||||||||| ||||||||    
T  27307152 atgttttttgcagttttagtc 27307172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 224
Target Start/End: Original strand, 17260389 - 17260441
Alignment:
Q  173 aaatcgaacaaaattgtccttaaactat-atgttttttgcaattttagtccta 224  Q
    ||||||||||||||||||| |||| ||| |||||||||||| |||||||||||    
T  17260389 aaatcgaacaaaattgtccataaattatcatgttttttgcagttttagtccta 17260441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 185
Target Start/End: Complemental strand, 17260767 - 17260691
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaa 185  Q
    ||||||||||  ||||||||||||   ||||||||||| ||||||||||| | ||| || ||| |||||||||||||    
T  17260767 aggcttaattgcacttttggtcctcgcattttgaccaattcacgaaaatgattctacctctttcaaatcgaacaaaa 17260691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 15708963 - 15709021
Alignment:
Q  102 aaaattaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggt 160  Q
    |||||| ||||||||||| ||||||||||||| | ||||| || |||||||||| ||||    
T  15708963 aaaatttaggcttaattacacttttggtcctagtgttttggcctactcacgaaactggt 15709021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 163
Target Start/End: Complemental strand, 24362382 - 24362328
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcct 163  Q
    ||||||||||| ||||||||||||  ||||||| || |||||||||| |||||||    
T  24362382 aggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcct 24362328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 164191 - 164244
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcct 163  Q
    |||||||||| ||||||||||||  | |||||||| |||||||||| |||||||    
T  164191 ggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcct 164244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 193
Target Start/End: Original strand, 8647429 - 8647521
Alignment:
Q  101 taaaattaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtcctt 193  Q
    |||||| | |||||||||| ||||||||||||  | ||||| || |||||||||| |||||||  | |||| |||  ||||||||| ||||||    
T  8647429 taaaataatggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccgttttaaaacagaacaaaatggtcctt 8647521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 107; Significance: 9e-54; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 107 - 237
Target Start/End: Original strand, 41260268 - 41260398
Alignment:
Q  107 taaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttt 206  Q
    ||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  41260268 taaggcttaattacacttttggtcctaccattttgaccaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttt 41260367  T
Q  207 tttgcaattttagtcctatctccctatttcc 237  Q
    |||||| |||||||| |||||||||||||||    
T  41260368 tttgcagttttagtcttatctccctatttcc 41260398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 108 - 237
Target Start/End: Complemental strand, 18428310 - 18428180
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtt-t 206  Q
    |||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |    
T  18428310 aaggtttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 18428211  T
Q  207 tttgcaattttagtcctatctccctatttcc 237  Q
    |||||| ||||| ||||||||||||||||||    
T  18428210 tttgcagttttactcctatctccctatttcc 18428180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 110 - 237
Target Start/End: Original strand, 18049590 - 18049718
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg-ttttt 208  Q
    |||| ||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||    
T  18049590 ggctcaattacacttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 18049689  T
Q  209 tgcaattttagtcctatctccctatttcc 237  Q
    |||| ||||||||||||||||||||||||    
T  18049690 tgcagttttagtcctatctccctatttcc 18049718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 5730816 - 5730942
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  5730816 aggcttaattacacttttggtcctaccattttgaccaactcacgaaaatagtcctatcttttttaaatcaaacaaaatcgtccttaaactatatgttttt 5730915  T
Q  209 tgcaattttagtcctatctccctattt 235  Q
    |||  ||||||||||| ||||||||||    
T  5730916 tgctgttttagtcctacctccctattt 5730942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 109 - 237
Target Start/End: Complemental strand, 600045 - 599917
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    ||||||||||| |||||||||||||| ||||||||||||| |||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||    
T  600045 aggcttaattacacttttggtcctaccattttgaccaactaacgaaaatggtcatatcttttttaaatggaacaaaatcgtccttaaactatatgttttt 599946  T
Q  209 tgcaattttagtcctatctccctatttcc 237  Q
    |||| |||||||| |||||| ||||||||    
T  599945 tgcagttttagtcttatctctctatttcc 599917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 112 - 237
Target Start/End: Original strand, 28254427 - 28254553
Alignment:
Q  112 cttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg-ttttttg 210  Q
    |||||||| |||||||||||||| ||||||| |||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||| |||||||    
T  28254427 cttaattacacttttggtcctaccattttgatcaactcacgaaaatggtcctatctattttaaattgaacaaaatcgtccttaaactatatgtttttttg 28254526  T
Q  211 caattttagtcctatctccctatttcc 237  Q
    || ||||||||||||||||||||||||    
T  28254527 cagttttagtcctatctccctatttcc 28254553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 109 - 237
Target Start/End: Complemental strand, 15256378 - 15256247
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtt--- 205  Q
    ||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||       
T  15256378 aggcttaattacacttttggtcctaccattttgaccaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 15256279  T
Q  206 ttttgcaattttagtcctatctccctatttcc 237  Q
    ||||||| || ||||| |||||||||||||||    
T  15256278 ttttgcagttctagtcatatctccctatttcc 15256247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 109 - 237
Target Start/End: Original strand, 34799078 - 34799207
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg-tttt 207  Q
    ||||||||||| |||||||||| ||| ||||||||||||||| |||||||||||||| |||||||||||||||||| | |||||||||||||||| ||||    
T  34799078 aggcttaattacacttttggtcataccattttgaccaactcatgaaaatggtcctattttttttaaatcgaacaaagtcgtccttaaactatatgttttt 34799177  T
Q  208 ttgcaattttagtcctatctccctatttcc 237  Q
    ||||| ||||||||||||||||||||||||    
T  34799178 ttgcagttttagtcctatctccctatttcc 34799207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 109 - 237
Target Start/End: Original strand, 15255852 - 15255980
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    ||||||||||| ||||||||||||   |||||||||||||||||||| |||||||| || |||||||||||||||||| |||| ||||||||||||||||    
T  15255852 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttt 15255951  T
Q  209 tgcaattttagtcctatctccctatttcc 237  Q
    |||| ||||||||||||||||||||||||    
T  15255952 tgcagttttagtcctatctccctatttcc 15255980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 109 - 237
Target Start/End: Complemental strand, 16578643 - 16578515
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    ||||||||||| |||||||||||||| |||||||| ||||||||||||||||  ||||||||| ||||||||||||||  || |||||||||||||||||    
T  16578643 aggcttaattacacttttggtcctaccattttgacgaactcacgaaaatggttatatctttttcaaatcgaacaaaatcatcattaaactatatgttttt 16578544  T
Q  209 tgcaattttagtcctatctccctatttcc 237  Q
    |||| ||||||||||||||||||||||||    
T  16578543 tgcagttttagtcctatctccctatttcc 16578515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 112 - 235
Target Start/End: Original strand, 2208716 - 2208840
Alignment:
Q  112 cttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatat-gttttttg 210  Q
    |||||||| ||||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||  ||||||     
T  2208716 cttaattacacttttgatcctaccattttgaccaactcacgaaaattgtcctatcttttttaaatcgaacaaaatcgtccttaaactatatattttttta 2208815  T
Q  211 caattttagtcctatctccctattt 235  Q
    ||||||||||| |||||||||||||    
T  2208816 caattttagtcatatctccctattt 2208840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 113 - 237
Target Start/End: Complemental strand, 9797270 - 9797145
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtt-ttttgc 211  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| || ||||| |||||||||||||||||| ||||||    
T  9797270 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcaaataaaatcgtccttaaactatatgtttttttgc 9797171  T
Q  212 aattttagtcctatctccctatttcc 237  Q
    | ||||||| |||||| |||||||||    
T  9797170 agttttagttctatctacctatttcc 9797145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 100 - 237
Target Start/End: Complemental strand, 34799639 - 34799502
Alignment:
Q  100 ataaaattaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaacta 199  Q
    |||||||  ||||||||||| ||||||||||||   ||||||||||| | |||||| |||||||| || ||||||||||||||||||||||| |||||||    
T  34799639 ataaaatataggcttaattacacttttggtcctttcattttgaccaattaacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaacta 34799540  T
Q  200 tatgttttttgcaattttagtcctatctccctatttcc 237  Q
    ||||||||||||| |||||||||||||| |||||||||    
T  34799539 tatgttttttgcagttttagtcctatcttcctatttcc 34799502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 111 - 236
Target Start/End: Original strand, 42035773 - 42035898
Alignment:
Q  111 gcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttg 210  Q
    ||||||||| ||||||||||||   ||||||||||||||||||||||||| ||| || |||||||||||||||||| |||| |||||||||| | |||||    
T  42035773 gcttaattacacttttggtcctcacattttgaccaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccataaactatatatattttg 42035872  T
Q  211 caattttagtcctatctccctatttc 236  Q
    ||||||||||||||||||||||||||    
T  42035873 caattttagtcctatctccctatttc 42035898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 111 - 237
Target Start/End: Complemental strand, 28254971 - 28254845
Alignment:
Q  111 gcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttg 210  Q
    ||||||||| ||||||||||||   |||||||||||||||||||| |||||||| || |||||||||||||||||| |||| ||||||||||  ||||||    
T  28254971 gcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatataatttttg 28254872  T
Q  211 caattttagtcctatctccctatttcc 237  Q
    || ||||||||||||||||||||||||    
T  28254871 cagttttagtcctatctccctatttcc 28254845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 110 - 237
Target Start/End: Original strand, 9796726 - 9796853
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttttt 209  Q
    |||||||||| ||||||||||||   |||||||||||||||| ||| |||||||| || ||||||||||||||||||  ||| |||||||||||||||||    
T  9796726 ggcttaattacacttttggtccttgcattttgaccaactcacaaaattggtcctacctcttttaaatcgaacaaaatcatccataaactatatgtttttt 9796825  T
Q  210 gcaattttagtcctatctccctatttcc 237  Q
    ||| |||||||| |||||||||||||||    
T  9796826 gcagttttagtcatatctccctatttcc 9796853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 41260808 - 41260682
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    |||||||||||||||||||||| |   ||||||| |||||||||||| || || || || |||||||||||||||||| |||| ||||||||||||||||    
T  41260808 aggcttaattatacttttggtcattgcattttgatcaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttt 41260709  T
Q  209 tgcaattttagtcctatctccctattt 235  Q
    |||| ||||||||||||||||||||||    
T  41260708 tgcagttttagtcctatctccctattt 41260682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 105 - 237
Target Start/End: Original strand, 599527 - 599659
Alignment:
Q  105 attaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgt 204  Q
    ||||||||||||||| | ||||||||||   |||||||||||||||||||| ||||| || || ||||||||||||||||||  ||| |||| |||||||    
T  599527 attaaggcttaattacatttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcatccctaaattatatgt 599626  T
Q  205 tttttgcaattttagtcctatctccctatttcc 237  Q
    |||||||| |||||||| |||||||||||||||    
T  599627 tttttgcagttttagtcatatctccctatttcc 599659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 109 - 237
Target Start/End: Original strand, 16578107 - 16578235
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    ||||||||||| | ||||||| ||   |||||||||||||||||||| |||||||| || |||||||||||||||||| |||| |||| |||||||||||    
T  16578107 aggcttaattacatttttggttcttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaattatatgttttt 16578206  T
Q  209 tgcaattttagtcctatctccctatttcc 237  Q
    |||| |||| |||||||||||||||||||    
T  16578207 tgcagttttggtcctatctccctatttcc 16578235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 109 - 237
Target Start/End: Complemental strand, 35427359 - 35427231
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    ||||||||||| ||||||||||||   ||||||||||||||||||||||||| ||| || ||||||| |||||||||| |||| |||| ||||| |||||    
T  35427359 aggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggttctacctcttttaaaccgaacaaaatcgtccctaaattatatattttt 35427260  T
Q  209 tgcaattttagtcctatctccctatttcc 237  Q
    |||| ||||||||| ||||||||||||||    
T  35427259 tgcagttttagtcccatctccctatttcc 35427231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 109 - 235
Target Start/End: Complemental strand, 6115658 - 6115531
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtt-tt 207  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||| |||||||| || |||||||||||||||||| |||| ||||||||||||| ||    
T  6115658 aggcttaattatacttttggtccttgtattttgaccaactcgcgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttt 6115559  T
Q  208 ttgcaattttagtcctatctccctattt 235  Q
    ||| | ||||||| |||||||| |||||    
T  6115558 ttgtagttttagttctatctccttattt 6115531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 112 - 235
Target Start/End: Complemental strand, 5731356 - 5731233
Alignment:
Q  112 cttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgc 211  Q
    ||||||||||||||| ||| |   ||||||||||||||| |||| |||| ||| ||||| ||||||||||||||| |||| |||||||||||||||||||    
T  5731356 cttaattatactttttgtcattgcattttgaccaactcaggaaattggttctaccttttataaatcgaacaaaatcgtccataaactatatgttttttgc 5731257  T
Q  212 aattttagtcctatctccctattt 235  Q
    | ||||||| ||||||||||||||    
T  5731256 agttttagttctatctccctattt 5731233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 113 - 235
Target Start/End: Complemental strand, 18050134 - 18050012
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgca 212  Q
    ||||||| | ||||||||||   |||||||||||||||||||| ||||| || || |||||||||||||||||| |||| |||||||||||||||||||     
T  18050134 ttaattacatttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgct 18050035  T
Q  213 attttagtcctatctccctattt 235  Q
     ||||| ||||||||||||||||    
T  18050034 gttttaatcctatctccctattt 18050012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 109
Target Start/End: Original strand, 44135579 - 44135680
Alignment:
Q  15 caactacatttattaaattctccatagttataatcaataca-------ttacactaaaagatttaaatcaccttctaaagtcacatgacctcataaaatt 107  Q
    ||||||||| |||||||||||| ||| ||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44135579 caactacatatattaaattctcaatatttataatcaatacaatgtagtttacactaaaagatttaaatcaccttctaaagtcacatgacctcataaaatt 44135678  T
Q  108 aa 109  Q
    ||    
T  44135679 aa 44135680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 110 - 235
Target Start/End: Complemental strand, 7911162 - 7911037
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttttt 209  Q
    |||||||||| ||||||  ||||   ||||||||||||||||||||||||| ||| || |||||||||||||||||| |||| |||||||||| ||||||    
T  7911162 ggcttaattacacttttaatcctcgcattttgaccaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccctaaactatatatttttt 7911063  T
Q  210 gcaattttagtcctatctccctattt 235  Q
    ||| |||||||| |||| | ||||||    
T  7911062 gcagttttagtcatatccctctattt 7911037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 113 - 209
Target Start/End: Complemental strand, 35694421 - 35694325
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttttt 209  Q
    ||||||| |||||||||||| | |||||||| ||||||| ||||||||||||  |||||||||||||||||||| ||||||||||||||| ||||||    
T  35694421 ttaattacacttttggtccttccattttgactaactcacaaaaatggtcctacattttttaaatcgaacaaaatcgtccttaaactatatttttttt 35694325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 26252838 - 26252936
Alignment:
Q  139 ttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgcaattttagtcctatctccctatttcc 237  Q
    ||||| || |||||||| ||||   |||| |||||||||||||||||| |||| ||||||||||||||| |||| ||||||||||||||||||||||||    
T  26252838 ttgactaattcacgaaattggtaacatctcttttaaatcgaacaaaatcgtccctaaactatatgttttgtgcagttttagtcctatctccctatttcc 26252936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 7910614 - 7910730
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttt 207  Q
    |||||||||||| | ||||||||||   ||||||| |||||||||||||||||  || || |||||||||||||||||| |||| |||| ||||||||||    
T  7910614 aaggcttaattacatttttggtcctcacattttgatcaactcacgaaaatggttatacctcttttaaatcgaacaaaatcgtccctaaattatatgtttt 7910713  T
Q  208 ttgcaattttagtcctat 225  Q
    |||| | |||||||||||    
T  7910714 ttgc-agtttagtcctat 7910730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 111 - 237
Target Start/End: Original strand, 35693869 - 35693997
Alignment:
Q  111 gcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaac--tatatgttttt 208  Q
    ||||||||| ||||||| ||||   ||||||||||| | ||||||||| | ||| || |||||||||||| ||||| |||| |||||  ||||| |||||    
T  35693869 gcttaattacacttttgatccttgcattttgaccaatttacgaaaatgattctacctcttttaaatcgaataaaatcgtccataaactatatatattttt 35693968  T
Q  209 tgcaattttagtcctatctccctatttcc 237  Q
    | || ||||||||||||||||||||||||    
T  35693969 ttcagttttagtcctatctccctatttcc 35693997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 109 - 221
Target Start/End: Complemental strand, 42036319 - 42036206
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtt-tt 207  Q
    ||||||||||||||||||  || |   ||||||||||||| ||||||||| || || || |||||||||||||||||| |||| ||||||||||||| ||    
T  42036319 aggcttaattatacttttcatcttcgcattttgaccaacttacgaaaatgatcttacctcttttaaatcgaacaaaatcgtccctaaactatatgttttt 42036220  T
Q  208 ttgcaattttagtc 221  Q
    ||||| ||||||||    
T  42036219 ttgcagttttagtc 42036206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 106 - 218
Target Start/End: Original strand, 18674144 - 18674256
Alignment:
Q  106 ttaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtt 205  Q
    |||||||||||||| ||| ||||||||   | ||||||||| |||||||| |||| ||  |  |||||||||||||||||| |||| |||||||||||||    
T  18674144 ttaaggcttaattacactcttggtccttgcactttgaccaattcacgaaattggttcttccacttttaaatcgaacaaaatcgtccctaaactatatgtt 18674243  T
Q  206 ttttgcaatttta 218  Q
    ||||||| |||||    
T  18674244 ttttgcagtttta 18674256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 182 - 237
Target Start/End: Original strand, 35426885 - 35426940
Alignment:
Q  182 aaaattgtccttaaactatatgttttttgcaattttagtcctatctccctatttcc 237  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  35426885 aaaatggtccttaaactatatgttttttgcaattttactcctatctccctatttcc 35426940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 224
Target Start/End: Complemental strand, 9930213 - 9930087
Alignment:
Q  99 cataaaattaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaact 198  Q
    |||||||| |||||||||||| ||||||||||||  ||||||| || |||||||||| |||||||  | |||| |||| ||||||||| |||||| ||||    
T  9930213 cataaaataaaggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaact 9930114  T
Q  199 at-atgttttttgcaattttagtccta 224  Q
    || || ||| ||||| |||| ||||||    
T  9930113 atcatttttgttgcatttttcgtccta 9930087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 224
Target Start/End: Complemental strand, 28877437 - 28877321
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgttt 206  Q
    |||| ||||||| ||||||||||||   |||||||||||||||||||||||||  || || ||| |||| |||||||||||||| | |||||| ||||||    
T  28877437 aaggtttaattacacttttggtcctcgcattttgaccaactcacgaaaatggttatacctctttcaaattgaacaaaattgtccct-aactatcatgttt 28877339  T
Q  207 tttgcaattttagtccta 224  Q
    |||||  |||||||||||    
T  28877338 tttgctgttttagtccta 28877321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 229
Target Start/End: Original strand, 18805167 - 18805282
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgca 212  Q
    ||||||| |||||||||||    |||||||| | |||||||||||||| || ||| ||||||||||||||||| |||||   ||||||||||||||| |     
T  18805167 ttaattacacttttggtccctgcattttgacaagctcacgaaaatggttct-tctcttttaaatcgaacaaaactgtcccagaactatatgttttttcct 18805265  T
Q  213 attttagtcctatctcc 229  Q
     ||||||||||| ||||    
T  18805266 gttttagtcctacctcc 18805282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 100 - 163
Target Start/End: Original strand, 35426832 - 35426895
Alignment:
Q  100 ataaaattaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcct 163  Q
    |||| ||| ||| ||||||| |||||| ||||||| ||||||||||||||||||||||||||||    
T  35426832 ataatatttaggtttaattacacttttagtcctaccattttgaccaactcacgaaaatggtcct 35426895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 100 - 150
Target Start/End: Complemental strand, 10919741 - 10919691
Alignment:
Q  100 ataaaattaaggcttaattatacttttggtcctactattttgaccaactca 150  Q
    |||||||||||||||||||||||||||||||||  | |||||||| |||||    
T  10919741 ataaaattaaggcttaattatacttttggtcctcgtgttttgacctactca 10919691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 226
Target Start/End: Complemental strand, 10047155 - 10047066
Alignment:
Q  137 ttttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgttttttgcaattttagtcctatc 226  Q
    |||||| |||||||||||||| ||| | | | |||||||||||||||||| |||  |||||||| ||| |||||||| ||||| |||||||    
T  10047155 ttttgatcaactcacgaaaatagtcttgtttcttttaaatcgaacaaaatggtctctaaactatcatg-tttttgcagttttaatcctatc 10047066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 162
Target Start/End: Complemental strand, 11657012 - 11656950
Alignment:
Q  100 ataaaattaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcc 162  Q
    ||||||| |||||||||||| ||||||||||||  | ||||| || |||||||||| ||||||    
T  11657012 ataaaataaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcc 11656950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 163
Target Start/End: Original strand, 44831243 - 44831300
Alignment:
Q  106 ttaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcct 163  Q
    |||||||||||||| ||||||||||||  | ||||| || |||||||||| |||||||    
T  44831243 ttaaggcttaattacacttttggtcctcatgttttggcctactcacgaaattggtcct 44831300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 224
Target Start/End: Original strand, 2617800 - 2617860
Alignment:
Q  165 tcttttttaaatcgaacaaaattgtccttaaactat-atgttttttgcaattttagtccta 224  Q
    ||||||| |||| ||||||| | ||||||| ||||| ||||||||||||||||| ||||||    
T  2617800 tctttttcaaattgaacaaagtagtccttatactatcatgttttttgcaattttcgtccta 2617860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 33742921 - 33742973
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtc 161  Q
    ||||||||||| ||||||||||||  | |||||||| |||||||||| |||||    
T  33742921 aggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtc 33742973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 106; Significance: 4e-53; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 100 - 237
Target Start/End: Original strand, 5114458 - 5114595
Alignment:
Q  100 ataaaattaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaacta 199  Q
    ||||||| |||||||||||| | ||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  5114458 ataaaatgaaggcttaattacatttttgatcctaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaacta 5114557  T
Q  200 tatgttttttgcaattttagtcctatctccctatttcc 237  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  5114558 tatgttttttgcagttttagtcctatctccctatttcc 5114595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 113 - 237
Target Start/End: Complemental strand, 24640728 - 24640604
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgca 212  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  24640728 ttaattatacttttggtcctaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 24640629  T
Q  213 attttagtcctatctccctatttcc 237  Q
     |||||||| |||||||||||||||    
T  24640628 gttttagtcttatctccctatttcc 24640604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 110 - 237
Target Start/End: Complemental strand, 25472559 - 25472431
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtt-ttt 208  Q
    |||||||||| ||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||    
T  25472559 ggcttaattacacttttgatcctaccattttgaccaactcacgaaaatggtcttatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 25472460  T
Q  209 tgcaattttagtcctatctccctatttcc 237  Q
    |||| ||||||||||||||||||||||||    
T  25472459 tgcagttttagtcctatctccctatttcc 25472431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 109 - 237
Target Start/End: Original strand, 31573719 - 31573852
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtccta-tcttttttaaatcgaacaaaattgtccttaaactatatg---- 203  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| |||||| | |||||||||||||||||||| || |||||||||||||        
T  31573719 aggcttaattatacttttggtcctaccattttgaccaactcacgaaaatagtcctatttttttttaaatcgaacaaaatcgttcttaaactatatgtttt 31573818  T
Q  204 ttttttgcaattttagtcctatctccctatttcc 237  Q
    ||||||||| ||||||||||||||||||||||||    
T  31573819 ttttttgcagttttagtcctatctccctatttcc 31573852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 109 - 237
Target Start/End: Complemental strand, 30251239 - 30251110
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgt-ttt 207  Q
    ||||||||||| ||||||| ||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||| ||||||||||||| ||| |||    
T  30251239 aggcttaattacacttttgatcctactattttgaccaactcacaaaaattgtcatatcttttttaaatcgaacaaaatcgtccttaaactatttgtattt 30251140  T
Q  208 ttgcaattttagtcctatctccctatttcc 237  Q
    ||| | |||||||| |||||||||||||||    
T  30251139 ttgtagttttagtcttatctccctatttcc 30251110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 109 - 237
Target Start/End: Complemental strand, 5121016 - 5120888
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    ||||||||||| ||||||||||||   |||||||||||||||||||| |  ||||| || |||||||||||||||||| |||| ||||||||||||||||    
T  5121016 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattattcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttt 5120917  T
Q  209 tgcaattttagtcctatctccctatttcc 237  Q
    |||| ||||||||||||||||||||||||    
T  5120916 tgcagttttagtcctatctccctatttcc 5120888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 110 - 237
Target Start/End: Complemental strand, 31073688 - 31073561
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttttt 209  Q
    |||||||||| ||||||||||||   |||||||||| ||||||||| ||||| || || ||||||||||||||||||||||| ||||||||||||||| |    
T  31073688 ggcttaattacacttttggtccttgcattttgaccagctcacgaaattggtcatacctcttttaaatcgaacaaaattgtccctaaactatatgttttgt 31073589  T
Q  210 gcaattttagtcctatctccctatttcc 237  Q
    ||| ||||||||||||||||||||||||    
T  31073588 gcagttttagtcctatctccctatttcc 31073561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 109 - 237
Target Start/End: Complemental strand, 29891631 - 29891499
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctat----cttttttaaatcgaacaaaattgtccttaaactatatgt 204  Q
    ||||||||||| |||||||||||||| ||||||||||||||  |||||||||||| |     || ||||||| ||||||||| |||||||||||||||||    
T  29891631 aggcttaattacacttttggtcctaccattttgaccaactcgtgaaaatggtccttttttatttatttaaattgaacaaaatcgtccttaaactatatgt 29891532  T
Q  205 tttttgcaattttagtcctatctccctatttcc 237  Q
    |||||||| ||||||||||||||||||||||||    
T  29891531 tttttgcagttttagtcctatctccctatttcc 29891499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 108 - 235
Target Start/End: Complemental strand, 31574273 - 31574146
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttt 207  Q
    |||||||||||| ||||||||||||   |||||||||||||||||||| | ||| || || |||||||||||||||||| |||| |||||||||||||||    
T  31574273 aaggcttaattacacttttggtccttgcattttgaccaactcacgaaattagtcatacctcttttaaatcgaacaaaatcgtccctaaactatatgtttt 31574174  T
Q  208 ttgcaattttagtcctatctccctattt 235  Q
    ||||| |||||||| |||||||||||||    
T  31574173 ttgcagttttagtcatatctccctattt 31574146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 113 - 235
Target Start/End: Original strand, 25468852 - 25468976
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttt--ttg 210  Q
    ||||||| ||||||||||||   |||||||||||||||||||| ||||| ||||| |||||||||||||||||| |||| |||||||||||||||  |||    
T  25468852 ttaattacacttttggtccttacattttgaccaactcacgaaattggtcatatctcttttaaatcgaacaaaatcgtccctaaactatatgtttttcttg 25468951  T
Q  211 caattttagtcctatctccctattt 235  Q
    || ||||||||||||||||||||||    
T  25468952 cagttttagtcctatctccctattt 25468976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 237
Target Start/End: Original strand, 28636292 - 28636418
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttttt 209  Q
    |||||||||| | |||||||| |  ||||||||||||||||||||| ||||| ||  | |||||||||||||||||| || | ||||||||||| |||||    
T  28636292 ggcttaattacatttttggtcattgtattttgaccaactcacgaaattggtcttacttcttttaaatcgaacaaaatcgttcctaaactatatg-ttttt 28636390  T
Q  210 gcaattttagtcctatctccctatttcc 237  Q
    ||| |||||||| |||||||||||||||    
T  28636391 gcagttttagtcatatctccctatttcc 28636418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 237
Target Start/End: Original strand, 31073143 - 31073277
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaat------tgtccttaaactata-t 202  Q
    |||||||||| ||||||||||||   |||||||||||| || |||||||||||||||||||||||||||||||||||       |||||||||||||| |    
T  31073143 ggcttaattacacttttggtcctttaattttgaccaacacatgaaaatggtcctatcttttttaaatcgaacaaaatcgtttaagtccttaaactatatt 31073242  T
Q  203 gttttttgcaattttagtcctatctccctatttcc 237  Q
     ||||||||| |||||||| ||||| |||||||||    
T  31073243 attttttgcagttttagtcatatcttcctatttcc 31073277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 109 - 237
Target Start/End: Original strand, 29891079 - 29891207
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    ||||||||||| ||||||| ||||   |||||||| |||| |||||| || || || || ||||||| |||||||||  |||| ||||||||||||||||    
T  29891079 aggcttaattacacttttgttccttacattttgactaacttacgaaattgatcatacctcttttaaaccgaacaaaagcgtccctaaactatatgttttt 29891178  T
Q  209 tgcaattttagtcctatctccctatttcc 237  Q
    | |||||||| | ||||||||||||||||    
T  29891179 tacaattttaattctatctccctatttcc 29891207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 32836542 - 32836428
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttttt 209  Q
    |||||||||| |||||| |||||   |||||||||| ||||||||||||||| |  || ||| |||||||||||||  || |||||||| ||||||||||    
T  32836542 ggcttaattacacttttagtccttgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgttcttaaactgtatgtttttt 32836443  T
Q  210 gcaattttagtccta 224  Q
    ||| |||||||||||    
T  32836442 gcagttttagtccta 32836428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 229
Target Start/End: Complemental strand, 35163735 - 35163612
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtt-- 205  Q
    |||||||||||| |||||||||||    |||||||||| |||||||||||||| ||  || ||| ||||| |||||||| |||| |||||||||||||      
T  35163735 aaggcttaattacacttttggtccccgcattttgaccagctcacgaaaatggttctgcctctttcaaatcaaacaaaatcgtccctaaactatatgtttt 35163636  T
Q  206 ttttgcaattttagtcctatctcc 229  Q
    ||||||| ||||||||||| ||||    
T  35163635 ttttgcagttttagtcctacctcc 35163612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 183 - 237
Target Start/End: Complemental strand, 28636669 - 28636615
Alignment:
Q  183 aaattgtccttaaactatatgttttttgcaattttagtcctatctccctatttcc 237  Q
    |||| ||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  28636669 aaatcgtccttaaactatatgttttttgcagttttagtcttatctccctatttcc 28636615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 22534270 - 22534217
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcct 163  Q
    |||||||||| ||||||||||||  |||||||||||||||||||||||||||||    
T  22534270 ggcttaattacacttttggtcctcgtattttgaccaactcacgaaaatggtcct 22534217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 113 - 229
Target Start/End: Original strand, 35163187 - 35163303
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgttttttgc 211  Q
    ||||||| |||||| |||||   |||||||||| ||||| ||||||||| | ||| ||| |||||||||||||  |||| |||||||| |||||||||||    
T  35163187 ttaattacacttttagtcctcgcattttgaccagctcacaaaaatggtcttgtctctttcaaatcgaacaaaaccgtcc-taaactatcatgttttttgc 35163285  T
Q  212 aattttagtcctatctcc 229  Q
    | ||||||||||| ||||    
T  35163286 agttttagtcctacctcc 35163303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 100 - 224
Target Start/End: Original strand, 835384 - 835508
Alignment:
Q  100 ataaaattaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaacta 199  Q
    |||||| | ||||||||||  ||||||||||||   ||||| | || ||||||||||||||| |  || ||| ||||||||||||| ||||| |||||||    
T  835384 ataaaaattaggcttaattgcacttttggtcctcacatttttagcagctcacgaaaatggtcttgcctctttcaaatcgaacaaaactgtccctaaacta 835483  T
Q  200 tatgttttttgcaattttagtccta 224  Q
    |   |||||||||  ||||||||||    
T  835484 tcatttttttgcagctttagtccta 835508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 136 - 200
Target Start/End: Original strand, 31242832 - 31242896
Alignment:
Q  136 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat 200  Q
    ||||||||||||||||||||||| ||||  ||||||||||||||||| || |||||  |||||||    
T  31242832 attttgaccaactcacgaaaatgatcctgccttttttaaatcgaacataactgtccccaaactat 31242896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 136 - 224
Target Start/End: Complemental strand, 33096131 - 33096038
Alignment:
Q  136 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaat----tgtccttaaactat-atgttttttgcaattttagtccta 224  Q
    ||||| |||| |||| |||||||||| | ||| ||| |||||||||||||     |||||||||||||| ||||||||||||||||||||||||    
T  33096131 atttttaccagctcatgaaaatggtcatgtctctttcaaatcgaacaaaaccaactgtccttaaactatcatgttttttgcaattttagtccta 33096038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 107 - 193
Target Start/End: Complemental strand, 3835274 - 3835188
Alignment:
Q  107 taaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtcctt 193  Q
    ||||| ||||||| |||||||||||   | |||||||| ||||||||||||||||||  || ||| |||  ||||||||||||||||    
T  3835274 taaggtttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaacaaaattgtcctt 3835188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 100 - 229
Target Start/End: Complemental strand, 11445542 - 11445412
Alignment:
Q  100 ataaaattaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaacta 199  Q
    |||||||| ||||||||||| ||||||||||||  | ||||| || |||||||||| |||||||  |||||| |||  ||||||||  |||||| || ||    
T  11445542 ataaaatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaatta 11445443  T
Q  200 t-atgttttttgcaattttagtcctatctcc 229  Q
    | || ||| ||||| |||| |||||| ||||    
T  11445442 tcatttttgttgcatttttcgtcctacctcc 11445412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 229
Target Start/End: Original strand, 33095716 - 33095834
Alignment:
Q  112 cttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgttttttg 210  Q
    |||||||  ||||||||||||   ||||| | || ||| |||||||||||  | || ||| |||||||||||||  |||| |||||||| ||||||||||    
T  33095716 cttaattgcacttttggtcctcgcatttttatcagctcgcgaaaatggtctcacctctttcaaatcgaacaaaaccgtccctaaactatcatgttttttg 33095815  T
Q  211 caattttagtcctatctcc 229  Q
    || ||||||||||| ||||    
T  33095816 cagttttagtcctacctcc 33095834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 18257682 - 18257629
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcct 163  Q
    |||||||||||||||||||||||  | |||||||| |||||||||| |||||||    
T  18257682 ggcttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcct 18257629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 163
Target Start/End: Original strand, 28472636 - 28472690
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcct 163  Q
    ||||||||||| ||||||||||||  | ||||| ||||||||||||| |||||||    
T  28472636 aggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcct 28472690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 163
Target Start/End: Original strand, 29859825 - 29859879
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcct 163  Q
    ||||||||||| ||||||||||||  | ||||| ||||||||||||| |||||||    
T  29859825 aggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcct 29859879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 23073997 - 23074074
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaa 185  Q
    |||||||||||| ||||||||||||  | ||||| || |||||||||| |||||||  | |||| |||| ||||||||    
T  23073997 aaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaa 23074074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 30250722 - 30250775
Alignment:
Q  111 gcttaattatacttttggtcctactattttgaccaactcacgaaaatggtccta 164  Q
    ||||||||| | ||||||||||   |||||||||||||||||||| ||||||||    
T  30250722 gcttaattacaattttggtccttgcattttgaccaactcacgaaattggtccta 30250775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 189
Target Start/End: Complemental strand, 835772 - 835692
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgt 189  Q
    ||||||||||  ||||||||||||   ||||| | || || ||||||||||||||  || ||| |||||||||||||||||    
T  835772 aggcttaattgcacttttggtcctcgcatttttagcagcttacgaaaatggtcctgcctctttcaaatcgaacaaaattgt 835692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 20741099 - 20741183
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtcctt 193  Q
    ||||||||||| ||||||||||||  | ||||| || |||||||||| |||||||  | |||| |||  ||||||||| ||||||    
T  20741099 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtcctt 20741183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 161
Target Start/End: Original strand, 31470302 - 31470366
Alignment:
Q  97 ctcataaaattaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtc 161  Q
    |||||||| |||||||||||||| ||||||| ||||  | ||||| || |||||||||| |||||    
T  31470302 ctcataaacttaaggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtc 31470366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 102; Significance: 9e-51; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 109 - 237
Target Start/End: Original strand, 9992153 - 9992282
Alignment:
Q  109 aggcttaattatacttttggtcctactatttt-gaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttt 207  Q
    ||||||||||| |||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  9992153 aggcttaattacacttttggtcctaccatttttgaccaactcacggaaatggtcctatcttttttaaatcgaacaaaatggtccttaaactatatgtttt 9992252  T
Q  208 ttgcaattttagtcctatctccctatttcc 237  Q
    ||||| ||||||||||||||||||||||||    
T  9992253 ttgcagttttagtcctatctccctatttcc 9992282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 108 - 235
Target Start/End: Original strand, 37505065 - 37505193
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg-ttt 206  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||    
T  37505065 aaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 37505164  T
Q  207 tttgcaattttagtcctatctccctattt 235  Q
    |||||| |||||||||||| |||||||||    
T  37505165 tttgcagttttagtcctatttccctattt 37505193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 112 - 237
Target Start/End: Complemental strand, 34555926 - 34555799
Alignment:
Q  112 cttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtt--tttt 209  Q
    |||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||    
T  34555926 cttaattacacttttagtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttt 34555827  T
Q  210 gcaattttagtcctatctccctatttcc 237  Q
    ||| |||||||| |||||||||||||||    
T  34555826 gcagttttagtcatatctccctatttcc 34555799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 103 - 237
Target Start/End: Original strand, 21938556 - 21938690
Alignment:
Q  103 aaattaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatat 202  Q
    |||| |||| ||||||| |||||||||| ||| ||||||| ||||||||||||||| || |||||||||||||||||||||||| |||| ||||||||||    
T  21938556 aaataaaggtttaattacacttttggtcttaccattttgatcaactcacgaaaatgatcttatcttttttaaatcgaacaaaatcgtccataaactatat 21938655  T
Q  203 gttttttgcaattttagtcctatctccctatttcc 237  Q
    |||||||||| ||||||||||||||||||||||||    
T  21938656 gttttttgcagttttagtcctatctccctatttcc 21938690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 110 - 235
Target Start/End: Complemental strand, 9992701 - 9992576
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttttt 209  Q
    |||||||||| ||||||||||||   |||||||| |||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  9992701 ggcttaattacacttttggtccttgcattttgacaaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtgcttaaactatatgtttttt 9992602  T
Q  210 gcaattttagtcctatctccctattt 235  Q
    ||| | ||||||||||||||||||||    
T  9992601 gcagtattagtcctatctccctattt 9992576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 109 - 237
Target Start/End: Complemental strand, 16299228 - 16299101
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    |||||||||||||||||| ||||||| ||||||| |||||| ||||||||||||||| |||||||| | ||||||||| |||||||||||||||||||||    
T  16299228 aggcttaattatactttttgtcctaccattttgatcaactcgcgaaaatggtcctattttttttaatt-gaacaaaatcgtccttaaactatatgttttt 16299130  T
Q  209 tgcaattttagtcctatctccctatttcc 237  Q
    |||| |||||||||||||||| |||||||    
T  16299129 tgcagttttagtcctatctccatatttcc 16299101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 108 - 237
Target Start/End: Original strand, 30786769 - 30786899
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaat-ggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttt 206  Q
    |||||||||||| ||||||||| ||   |||||||||||||||||||||| ||||||| || |||||||||||||||||| |||| ||||||||||||||    
T  30786769 aaggcttaattacacttttggttcttgcattttgaccaactcacgaaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttt 30786868  T
Q  207 tttgcaattttagtcctatctccctatttcc 237  Q
    |||||| ||||||||||||||||||||||||    
T  30786869 tttgcagttttagtcctatctccctatttcc 30786899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 110 - 229
Target Start/End: Complemental strand, 10279093 - 10278977
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttttt 209  Q
    |||||||||| ||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||      
T  10279093 ggcttaattacacttttgatcctaccgttttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt-- 10278996  T
Q  210 gcaattttagtcctatctcc 229  Q
     || ||||||||||||||||    
T  10278995 -cagttttagtcctatctcc 10278977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 1837504 - 1837630
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    ||||||||||| ||||||||||||   ||||||| |||||||||||| || || ||||| ||||||||||||||||||||||| ||||||||||||||||    
T  1837504 aggcttaattacacttttggtccttgcattttgatcaactcacgaaattgatcatatctcttttaaatcgaacaaaattgtccctaaactatatgttttt 1837603  T
Q  209 tgcaattttagtcctatctccctattt 235  Q
    |||| |||||||| |||||||||||||    
T  1837604 tgcagttttagtcatatctccctattt 1837630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 101 - 237
Target Start/End: Complemental strand, 44954781 - 44954645
Alignment:
Q  101 taaaattaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat 200  Q
    |||||| || ||||||||| ||||||||||||   ||||||||||||||| ||||||| || || |||||||||||| ||||||||  ||| ||||||||    
T  44954781 taaaataaaagcttaattacacttttggtcctcgcattttgaccaactcatgaaaatgatcataccttttttaaatcaaacaaaatcatccataaactat 44954682  T
Q  201 atgttttttgcaattttagtcctatctccctatttcc 237  Q
    |||||||||||| ||||||||||||||||||||||||    
T  44954681 atgttttttgcagttttagtcctatctccctatttcc 44954645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 113 - 235
Target Start/End: Complemental strand, 50305328 - 50305203
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactata---tgtttttt 209  Q
    ||||||| ||||||||| |||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||   | ||||||    
T  50305328 ttaattacacttttggttctaccattttaaccaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatattttttttt 50305229  T
Q  210 gcaattttagtcctatctccctattt 235  Q
    ||| |||||||| |||||||||||||    
T  50305228 gcagttttagtcatatctccctattt 50305203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 107 - 237
Target Start/End: Complemental strand, 52336059 - 52335929
Alignment:
Q  107 taaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttt 206  Q
    |||||||||||||  |||||||| |||  ||||||||||||||| |||| |||||||| || |||||||||||||||||| |||| |||||||||| |||    
T  52336059 taaggcttaattactcttttggttctatcattttgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatattttt 52335960  T
Q  207 tttgcaattttagtcctatctccctatttcc 237  Q
    |||||| |||||||| |||||||||||||||    
T  52335959 tttgcagttttagtcatatctccctatttcc 52335929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 108 - 235
Target Start/End: Original strand, 29438928 - 29439056
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg-ttt 206  Q
    |||||||||||| ||||||||||||   |||||||||||||||||||| |||||||| || |||||||||||||||||| |||| ||||||| ||| |||    
T  29438928 aaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactaaatgtttt 29439027  T
Q  207 tttgcaattttagtcctatctccctattt 235  Q
    |||||| ||||||||||||||| ||||||    
T  29439028 tttgcagttttagtcctatctctctattt 29439056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 110 - 237
Target Start/End: Complemental strand, 444097 - 443970
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttttt 209  Q
    |||||||||||||||||| || |   |||||||||||||||||||| | ||| || || |||||||||||||||||| || | |||||||||||||||||    
T  444097 ggcttaattatacttttgatctttgcattttgaccaactcacgaaatttgtcatacctcttttaaatcgaacaaaatcgttcctaaactatatgtttttt 443998  T
Q  210 gcaattttagtcctatctccctatttcc 237  Q
    ||| ||||||||||||||||||||||||    
T  443997 gcagttttagtcctatctccctatttcc 443970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 110 - 237
Target Start/End: Complemental strand, 2868254 - 2868127
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttttt 209  Q
    |||||||||| ||||||| ||||   |||||||||||| |||||||||||||||| || |||||||||||||||||| |||| || ||||||||||||||    
T  2868254 ggcttaattacacttttgatcctcacattttgaccaacacacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctacactatatgtttttt 2868155  T
Q  210 gcaattttagtcctatctccctatttcc 237  Q
    ||| |||||||| |||| ||||||||||    
T  2868154 gcagttttagtcatatccccctatttcc 2868127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 121 - 229
Target Start/End: Complemental strand, 29439457 - 29439347
Alignment:
Q  121 acttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtt--ttttgcaatttta 218  Q
    ||||||||||| || ||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||  |||||||  ||||    
T  29439457 acttttggtcccaccattttgatcaactcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttttgcagattta 29439358  T
Q  219 gtcctatctcc 229  Q
    |||||||||||    
T  29439357 gtcctatctcc 29439347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 111 - 237
Target Start/End: Original strand, 16298683 - 16298809
Alignment:
Q  111 gcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttg 210  Q
    ||||||||| | |||||| |||   |||||||||||||||||||| ||||| || || |||||||||||||||||| |||| ||||||||||||||||||    
T  16298683 gcttaattacatttttggcccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttg 16298782  T
Q  211 caattttagtcctatctccctatttcc 237  Q
    || |||||||||||||| |||||||||    
T  16298783 cagttttagtcctatctacctatttcc 16298809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 136 - 233
Target Start/End: Original strand, 2867937 - 2868034
Alignment:
Q  136 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgcaattttagtcctatctccctat 233  Q
    ||||||||||||||||||||||| || ||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||| |||||||    
T  2867937 attttgaccaactcacgaaaatgatcatatctcttttaaatcgaacaaaattgtcgttaaactatatgttttttgcagttttagtcatatttccctat 2868034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 100 - 237
Target Start/End: Original strand, 4080011 - 4080148
Alignment:
Q  100 ataaaattaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaacta 199  Q
    ||||||| |||||| ||||| ||||||||||||   || ||||||||||||||||| || || || || |||||||||||||||||| |||| |||||||    
T  4080011 ataaaataaaggctcaattacacttttggtccttgcatcttgaccaactcacgaaattgatcgtacctattttaaatcgaacaaaatcgtccctaaacta 4080110  T
Q  200 tatgttttttgcaattttagtcctatctccctatttcc 237  Q
    |||||||||| || |||||||| |||||||||||||||    
T  4080111 tatgttttttacagttttagtcatatctccctatttcc 4080148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 110 - 235
Target Start/End: Complemental strand, 37505613 - 37505489
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttttt 209  Q
    |||||||||||| ||||||||||  ||||||||||||||||||||| || || ||||| ||||||| | |||||||| |||| |||||||||||| ||||    
T  37505613 ggcttaattatatttttggtccttttattttgaccaactcacgaaattgatcatatctcttttaaaacaaacaaaatcgtccataaactatatgt-tttt 37505515  T
Q  210 gcaattttagtcctatctccctattt 235  Q
    ||| ||||||||||||||||||||||    
T  37505514 gcagttttagtcctatctccctattt 37505489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 112 - 235
Target Start/End: Original strand, 10278550 - 10278674
Alignment:
Q  112 cttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg-ttttttg 210  Q
    |||||||| ||||||||||||   |||||||||||||||||||| || ||||| || |||||||||||||||||| |||| ||||||||||| |||||||    
T  10278550 cttaattacacttttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttg 10278649  T
Q  211 caattttagtcctatctccctattt 235  Q
    || ||||||||||||||||| ||||    
T  10278650 cagttttagtcctatctccccattt 10278674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 109 - 209
Target Start/End: Complemental strand, 30787345 - 30787245
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    ||||||||||| ||||||| |||||| |||| || |||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||    
T  30787345 aggcttaattacacttttgatcctaccatttagatcaactcacgaaaatggtcatatctttttaaaatcgaacaaaatcgtccttaaactatatgttttt 30787246  T
Q  209 t 209  Q
    |    
T  30787245 t 30787245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 113 - 212
Target Start/End: Complemental strand, 37421488 - 37421388
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatctt-ttttaaatcgaacaaaattgtccttaaactatatgttttttgc 211  Q
    ||||||| |||||| ||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||    
T  37421488 ttaattacacttttagtcataccattttgaccaactcacgaaaatggtcctatctttttttaaatcgaacaaaatcgtccttaaactatatgatttttgc 37421389  T
Q  212 a 212  Q
    |    
T  37421388 a 37421388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 113 - 229
Target Start/End: Original strand, 39485068 - 39485184
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgca 212  Q
    ||||||| ||||||||||||   |||||||| | |||||||||||||||||| || ||| |||||||||||||| |||| ||||||||||||||||||||    
T  39485068 ttaattacacttttggtcctcgcattttgactagctcacgaaaatggtcctacctctttcaaatcgaacaaaatcgtccctaaactatatgttttttgca 39485167  T
Q  213 attttagtcctatctcc 229  Q
     ||||||||||||||||    
T  39485168 gttttagtcctatctcc 39485184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 112 - 235
Target Start/End: Complemental strand, 44582603 - 44582479
Alignment:
Q  112 cttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtt-ttttg 210  Q
    |||||||| ||||||||| |||| ||||||| |||||||||||||||||| |||| |||| |||||||||||||| ||| |||||||||||||| |||||    
T  44582603 cttaattacacttttggttctaccattttgatcaactcacgaaaatggtcatatcattttcaaatcgaacaaaatcgtctttaaactatatgtttttttg 44582504  T
Q  211 caattttagtcctatctccctattt 235  Q
    || |||||||| | |||||||||||    
T  44582503 cagttttagtcttgtctccctattt 44582479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 112 - 228
Target Start/End: Original strand, 44582059 - 44582175
Alignment:
Q  112 cttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgc 211  Q
    |||||||| ||||||||||||   ||||||||||||| |||||| |||||||| || |||||||||||||||||| |||  |||| ||||||||||||||    
T  44582059 cttaattacacttttggtccttacattttgaccaactaacgaaattggtcctacctcttttaaatcgaacaaaatcgtctctaaattatatgttttttgc 44582158  T
Q  212 aattttagtcctatctc 228  Q
    | |||||||||||||||    
T  44582159 agttttagtcctatctc 44582175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 110 - 237
Target Start/End: Original strand, 23340183 - 23340310
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttttt 209  Q
    |||||||||| ||||||| || |   |||||||||||||||||||| ||||||||||| |||||||||||||||||| |  | |||||||||| ||||||    
T  23340183 ggcttaattacacttttgatcattgcattttgaccaactcacgaaattggtcctatctcttttaaatcgaacaaaatcgctcataaactatatatttttt 23340282  T
Q  210 gcaattttagtcctatctccctatttcc 237  Q
    ||| |||||||| ||||||| |||||||    
T  23340283 gcagttttagtcatatctccttatttcc 23340310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 109 - 237
Target Start/End: Original strand, 34555378 - 34555508
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg--ttt 206  Q
    ||||||||||| ||||||||||||   |||||||| ||||| ||||| |||| ||| || |||||||||||||||||| |||| |||||||||||  |||    
T  34555378 aggcttaattacacttttggtccttgcattttgactaactcgcgaaattggtgctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttt 34555477  T
Q  207 tttgcaattttagtcctatctccctatttcc 237  Q
    ||| || ||||||||||||||||||||||||    
T  34555478 tttacagttttagtcctatctccctatttcc 34555508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 45048158 - 45048269
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgca 212  Q
    ||||||| ||||||||||||   ||||||||||||| ||||||||||| ||| || |||||||| ||||||||| |||| ||||||||||||||||||||    
T  45048158 ttaattacacttttggtccttgcattttgaccaacttacgaaaatggttctacctcttttaaattgaacaaaatcgtccataaactatatgttttttgca 45048257  T
Q  213 attttagtccta 224  Q
     |||||||||||    
T  45048258 gttttagtccta 45048269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 148 - 237
Target Start/End: Original strand, 17641403 - 17641492
Alignment:
Q  148 tcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgcaattttagtcctatctccctatttcc 237  Q
    |||||||||||||| || |||||||||||||||||||||||| ||||||||||| |||||||| | ||||||| ||||||||||||||||    
T  17641403 tcacgaaaatggtcataccttttttaaatcgaacaaaattgttcttaaactatacgttttttgtagttttagttctatctccctatttcc 17641492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 113 - 237
Target Start/End: Complemental strand, 17641912 - 17641783
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-----atgtttt 207  Q
    ||||||| ||||||||||||   |||||||||||||||||||||||||| || || |||||||||||||||||| |||| ||||||||      | ||||    
T  17641912 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtccctaaactatttttattttttt 17641813  T
Q  208 ttgcaattttagtcctatctccctatttcc 237  Q
    ||||| ||||||||||||||||||||||||    
T  17641812 ttgcagttttagtcctatctccctatttcc 17641783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 136 - 237
Target Start/End: Original strand, 44954252 - 44954353
Alignment:
Q  136 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgcaattttagtcctatctccctattt 235  Q
    |||||||||||||||||||||||||| || |||||||||||| |||||||| ||| ||||| ||||||||||||||| |||||||| |||||| || |||    
T  44954252 attttgaccaactcacgaaaatggtcataccttttttaaatccaacaaaatcgtctttaaattatatgttttttgcagttttagtcgtatctctctgttt 44954351  T
Q  236 cc 237  Q
    ||    
T  44954352 cc 44954353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 237
Target Start/End: Complemental strand, 8230161 - 8230060
Alignment:
Q  136 attttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgcaattttagtcctatctccctattt 235  Q
    ||||||||| | |||||||||||||  || || |||||||||||||||||| |||| |||||||||||||||||||| |||||||| |||| ||||||||    
T  8230161 attttgacctattcacgaaaatggttatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgcagttttagtcatatccccctattt 8230062  T
Q  236 cc 237  Q
    ||    
T  8230061 cc 8230060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 113 - 237
Target Start/End: Original strand, 37421163 - 37421289
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg--ttttttg 210  Q
    ||||||| |||||||||| |   ||||||||||| |||||||| ||||| || || |||||||||||||||||| |||| |||||||||||  |||||||    
T  37421163 ttaattacacttttggtctttgcattttgaccaattcacgaaattggtcttacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttttg 37421262  T
Q  211 caattttagtcctatctccctatttcc 237  Q
    || |||||||| ||| |||||||||||    
T  37421263 cagttttagtcatatttccctatttcc 37421289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 109 - 236
Target Start/End: Original strand, 8229636 - 8229766
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg---tt 205  Q
    ||||||||||| ||||||| ||||   ||||||| ||||||||||||||| | |||  | |||||||||||| ||||| |||  |||||||||||   ||    
T  8229636 aggcttaattacacttttgatcctcacattttgatcaactcacgaaaatgattctacatcttttaaatcgaataaaatcgtctctaaactatatgttttt 8229735  T
Q  206 ttttgcaattttagtcctatctccctatttc 236  Q
    ||||||| |||||||||||||||||||||||    
T  8229736 ttttgcagttttagtcctatctccctatttc 8229766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 112 - 203
Target Start/End: Original strand, 50304441 - 50304532
Alignment:
Q  112 cttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg 203  Q
    |||||||| ||||||||||||   |||||||||||||||||||||||||| || || |||||||||||||||||| |||  |||||||||||    
T  50304441 cttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtctctaaactatatg 50304532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 9833698 - 9833583
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaacta-tatgttttt 208  Q
    ||||||||| |||||||| ||||  || |||||||||||||||||||| ||| |  || ||| |||||||||||||| |||| |||| || |||||||||    
T  9833698 ggcttaattgtacttttgatccttgtactttgaccaactcacgaaaatagtcatgcctctttcaaatcgaacaaaatcgtccctaaaatattatgttttt 9833599  T
Q  209 tgcaattttagtccta 224  Q
    |||| |||||||||||    
T  9833598 tgcagttttagtccta 9833583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 109 - 223
Target Start/End: Complemental strand, 50926788 - 50926674
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    ||||||||||| |||||||||| |   |||||||||| ||||||||||||||||  ||| ||| |||||||||||||  |||| ||||||||   |||||    
T  50926788 aggcttaattacacttttggtcatcgcattttgaccagctcacgaaaatggtcccgtctctttcaaatcgaacaaaaccgtccctaaactatcatttttt 50926689  T
Q  209 tgcaattttagtcct 223  Q
    |||| ||||||||||    
T  50926688 tgcagttttagtcct 50926674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 109 - 229
Target Start/End: Complemental strand, 17088686 - 17088566
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    ||||||||||| ||||||||||||   ||||||| || ||||||||||||||| |  || ||| ||||| |||||||  |||| |||||||||| |||||    
T  17088686 aggcttaattacacttttggtcctctcattttgaacagctcacgaaaatggtcatgcctctttcaaatcaaacaaaaccgtccctaaactatatattttt 17088587  T
Q  209 tgcaattttagtcctatctcc 229  Q
    |||| ||||||| ||| ||||    
T  17088586 tgcagttttagttctacctcc 17088566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 237
Target Start/End: Original strand, 1744330 - 1744454
Alignment:
Q  112 cttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttttt-g 210  Q
    |||||||| |||||||||| |  ||||||||| |||||||| ||||| ||||| ||||||  | || || ||||| |||| |||||||||| |||||| |    
T  1744330 cttaattacacttttggtcttcgtattttgacaaactcacgtaaatgatcctaccttttt--agtcaaataaaatcgtccctaaactatatatttttttg 1744427  T
Q  211 caattttagtcctatctccctatttcc 237  Q
    || |||||||| |||||||||||||||    
T  1744428 cagttttagtcatatctccctatttcc 1744454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 237
Target Start/End: Original strand, 6224700 - 6224826
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaa--ctatatgttttttg 210  Q
    ||||||| | ||||| |||||  |||||||||||||||  |||||||| ||   |||||||||||||||||||| |||||||||   ||||| ||||||     
T  6224700 ttaattacatttttgatcctatcattttgaccaactcataaaaatggttcttgtttttttaaatcgaacaaaatcgtccttaaattatatatatttttta 6224799  T
Q  211 caattttagtcctatctccctatttcc 237  Q
    || |||||||| |||||| ||||||||    
T  6224800 cagttttagtcttatctctctatttcc 6224826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 111 - 222
Target Start/End: Original strand, 23526659 - 23526770
Alignment:
Q  111 gcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttg 210  Q
    ||||| ||| ||||||||||||   |||||||||| |||||||||||||||||  || ||||||||||||||||||  ||| || |||||   |||||||    
T  23526659 gcttagttacacttttggtcctcacattttgaccagctcacgaaaatggtcctgcctcttttaaatcgaacaaaatcatccctagactatcatttttttg 23526758  T
Q  211 caattttagtcc 222  Q
    || |||||||||    
T  23526759 cagttttagtcc 23526770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 109 - 229
Target Start/End: Complemental strand, 44802718 - 44802597
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgtttt 207  Q
    ||||||||||| ||||||||||||   |||||||||| ||||||||| ||||| |  || ||| |||  ||||||||| |||| |||||||| |||||||    
T  44802718 aggcttaattacacttttggtccttgcattttgaccagctcacgaaagtggtcatgcctctttcaaacggaacaaaatcgtccctaaactatcatgtttt 44802619  T
Q  208 ttgcaattttagtcctatctcc 229  Q
    ||||| ||||||| ||| ||||    
T  44802618 ttgcagttttagttctacctcc 44802597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 113 - 229
Target Start/End: Complemental strand, 45048678 - 45048562
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgttttttgc 211  Q
    ||||||| ||||||||||||   ||||||||||  |||||||||||||| || || |||  ||||||||||||  |||| |||||||| |||||||||||    
T  45048678 ttaattacacttttggtcctcgcattttgaccagttcacgaaaatggtcatacctctttccaatcgaacaaaaccgtcc-taaactatcatgttttttgc 45048580  T
Q  212 aattttagtcctatctcc 229  Q
    | ||||||||||| ||||    
T  45048579 agttttagtcctacctcc 45048562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 222
Target Start/End: Complemental strand, 23527074 - 23526964
Alignment:
Q  112 cttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgc 211  Q
    |||||||||||||||| ||||   ||||||| || |||| |||||||||| |  ||||||||||||||||||||  |||  ||||||||   ||||||||    
T  23527074 cttaattatacttttgatcctcacattttgatcagctcatgaaaatggtcatgccttttttaaatcgaacaaaaccgtctctaaactatcatttttttgc 23526975  T
Q  212 aattttagtcc 222  Q
    | |||||||||    
T  23526974 agttttagtcc 23526964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 223
Target Start/End: Original strand, 25274767 - 25274869
Alignment:
Q  121 acttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttttgcaattttagt 220  Q
    ||||||||||||   |||||||||| ||||||||||||||| |  || ||| |||||||||||||  || | ||||||| |||||||||||| |||| ||    
T  25274767 acttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgttcctaaactacatgttttttgcatttttggt 25274866  T
Q  221 cct 223  Q
    |||    
T  25274867 cct 25274869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 220
Target Start/End: Original strand, 29020905 - 29020991
Alignment:
Q  135 tattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgttttttgcaattttagt 220  Q
    |||||||| || ||||  ||||||||| | ||| ||||||||||||||||||  |||||||| ||| ||||||||||||||||||||    
T  29020905 tattttgatcagctcataaaaatggtcatgtctcttttaaatcgaacaaaatcatccttaaattatcatgttttttgcaattttagt 29020991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 50926232 - 50926345
Alignment:
Q  112 cttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat--atgtttttt 209  Q
    |||||||| | |||||||||| | |||||||||| |||||||||||  || || || ||| |||||||||||||| |||| ||||||||   | ||||||    
T  50926232 cttaattacagttttggtcctcccattttgaccagctcacgaaaataatcatacctctttcaaatcgaacaaaatcgtccctaaactatcattttttttt 50926331  T
Q  210 gcaattttagtcct 223  Q
    ||| ||||||||||    
T  50926332 gcagttttagtcct 50926345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 44291832 - 44291742
Alignment:
Q  135 tattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgttttttgcaattttagtccta 224  Q
    ||||||||||| |||| |||||||||| | ||| |||||||||||| ||||| |||    |||||| |||||||||||| |||||||||||    
T  44291832 tattttgaccagctcatgaaaatggtcatgtctcttttaaatcgaataaaatcgtcacctaactatcatgttttttgcagttttagtccta 44291742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 183
Target Start/End: Complemental strand, 39843573 - 39843497
Alignment:
Q  107 taaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaa 183  Q
    |||||||| |||| ||||| ||||||   |||| ||||||||||||||| |||||||  |||||| |||||||||||    
T  39843573 taaggctttattacactttcggtcctcgcatttagaccaactcacgaaattggtcctgcctttttcaaatcgaacaa 39843497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 185
Target Start/End: Complemental strand, 15646752 - 15646665
Alignment:
Q  98 tcataaaattaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaa 185  Q
    ||||| |||||||||||||||| ||||||||||||  | ||||| || |||||||||| || ||||| | |||| |||  ||||||||    
T  15646752 tcatagaattaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctacccttttaaaacagaacaaaa 15646665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 196
Target Start/End: Complemental strand, 29021412 - 29021325
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaa 196  Q
    ||||||||||  ||||||||||||   |||||||||| |||||||||||| || |  || ||| |||||||||||||| |||| ||||    
T  29021412 aggcttaattgcacttttggtcctcacattttgaccagctcacgaaaatgttcatgcctctttcaaatcgaacaaaatcgtccctaaa 29021325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 223
Target Start/End: Original strand, 50419401 - 50419504
Alignment:
Q  121 acttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgttttttgcaattttag 219  Q
    ||||||||||||   ||||  |||||||||| ||||||||| | ||||||| |||||||||||| | ||||||  ||||| ||||||||| || |||| |    
T  50419401 acttttggtcctcgcatttaaaccaactcacaaaaatggtcatgtctttttcaaatcgaacaaagtagtccttgtactatcatgttttttacacttttgg 50419500  T
Q  220 tcct 223  Q
    ||||    
T  50419501 tcct 50419504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 209
Target Start/End: Original strand, 44291303 - 44291401
Alignment:
Q  112 cttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgtttttt 209  Q
    |||||||  ||||||||||||   |||||||||| ||||||||||||||  |  || ||| |||| ||||||||| |||| |||||||| |||||||||    
T  44291303 cttaattgcacttttggtcctcacattttgaccagctcacgaaaatggttatgcctctttcaaattgaacaaaatcgtccataaactatcatgtttttt 44291401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 163
Target Start/End: Original strand, 52268285 - 52268343
Alignment:
Q  105 attaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcct 163  Q
    ||||||||||||||| ||||||||||||  ||||||| ||  ||||||||| |||||||    
T  52268285 attaaggcttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcct 52268343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 18984668 - 18984611
Alignment:
Q  106 ttaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcct 163  Q
    |||||||||||||| ||||||||||||  | ||||| || |||||||||| |||||||    
T  18984668 ttaaggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcct 18984611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 15646191 - 15646243
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtc 161  Q
    ||||||||||||||||||||||||  | ||||| || |||||||||| |||||    
T  15646191 aggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtc 15646243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 229
Target Start/End: Original strand, 17088143 - 17088270
Alignment:
Q  107 taaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atg-- 203  Q
    ||||||||||||| ||| |||||| |   |||||||||| ||||||||||||||  |  || ||| |||||||||||||  |||| |||||||| |||      
T  17088143 taaggcttaattacactgttggtcatcgcattttgaccagctcacgaaaatggttttgcctctttcaaatcgaacaaaaccgtcc-taaactatcatgtt 17088241  T
Q  204 ---ttttttgcaattttagtcctatctcc 229  Q
       ||||||||||||||||||||| ||||    
T  17088242 tttttttttgcaattttagtcctacctcc 17088270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 221
Target Start/End: Complemental strand, 36229486 - 36229414
Alignment:
Q  150 acgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgttttttgcaattttagtc 221  Q
    |||||||||||| | ||| | |||||| ||||||| |  |||||||||||| |||||||||||| ||||||||    
T  36229486 acgaaaatggtcttgtctctattaaattgaacaaactgatccttaaactatcatgttttttgcagttttagtc 36229414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 39154576 - 39154512
Alignment:
Q  99 cataaaattaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcct 163  Q
    |||| ||| |||||||||||| ||||||||||||  | ||||| || |||||||||| |||||||    
T  39154576 catataatgaaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 39154512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 50419806 - 50419698
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgttttt 208  Q
    |||||||||  |||||||||| |   |||| ||||||||||||||| |||||||  |||||| |||| ||||||||  |||| |  ||||| ||||||||    
T  50419806 ggcttaattgcacttttggtcatcgcatttagaccaactcacgaaattggtcctgcctttttaaaattgaacaaaacggtccctgtactatcatgttttt 50419707  T
Q  209 tgcaatttt 217  Q
    |||| ||||    
T  50419706 tgcactttt 50419698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 224
Target Start/End: Complemental strand, 52235215 - 52235099
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgtttt 207  Q
    ||||||||||| ||||||| ||||   ||||| |||||||||||||| || ||||  | |||| ||||||||| ||   |||| || ||||| ||||||     
T  52235215 aggcttaattacacttttgatcctcagattttaaccaactcacgaaactgatcctgcccttttcaaatcgaacgaagcagtccctatactatcatgtttc 52235116  T
Q  208 ttgcaattttagtccta 224  Q
    |||||||||| ||||||    
T  52235115 ttgcaattttggtccta 52235099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 110 - 237
Target Start/End: Original strand, 6392 - 6519
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttttt 209  Q
    |||||||||  |||||||||||||| ||||||| ||||||| ||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  6392 ggcttaattgcacttttggtcctaccattttgatcaactcatgaaaatggtactatcttttttaaatcgaacaaaatcgtccttaaattatatgtttttt 6491  T
Q  210 gcaattttagtcctatctccctatttcc 237  Q
    ||| |||||||||||||| |||||||||    
T  6492 gcagttttagtcctatcttcctatttcc 6519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 106 - 224
Target Start/End: Complemental strand, 6946 - 6827
Alignment:
Q  106 ttaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg-t 204  Q
    |||||| |||||||  |||||||||||   ||||||||||| | |||||| ||||| ||  | |||||||||||||||||| || | ||||||| ||| |    
T  6946 ttaaggtttaattactcttttggtccttgcattttgaccaatttacgaaattggtcttacatcttttaaatcgaacaaaatcgtacctaaactacatgtt 6847  T
Q  205 tttttgcaattttagtccta 224  Q
    |||||||| |||||||||||    
T  6846 tttttgcagttttagtccta 6827  T

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Target: scaffold0709 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 110 - 237
Target Start/End: Original strand, 6410 - 6537
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtttttt 209  Q
    |||||||||  |||||||||||||| ||||||| ||||||| ||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  6410 ggcttaattgcacttttggtcctaccattttgatcaactcatgaaaatggtactatcttttttaaatcgaacaaaatcgtccttaaattatatgtttttt 6509  T
Q  210 gcaattttagtcctatctccctatttcc 237  Q
    ||| |||||||||||||| |||||||||    
T  6510 gcagttttagtcctatcttcctatttcc 6537  T

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Target: scaffold0709; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 106 - 224
Target Start/End: Complemental strand, 6964 - 6845
Alignment:
Q  106 ttaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg-t 204  Q
    |||||| |||||||  |||||||||||   ||||||||||| | |||||| ||||| ||  | |||||||||||||||||| || | ||||||| ||| |    
T  6964 ttaaggtttaattactcttttggtccttgcattttgaccaatttacgaaattggtcttacatcttttaaatcgaacaaaatcgtacctaaactacatgtt 6865  T
Q  205 tttttgcaattttagtccta 224  Q
    |||||||| |||||||||||    
T  6864 tttttgcagttttagtccta 6845  T

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Target: scaffold0097 (Bit Score: 82; Significance: 7e-39; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 109 - 237
Target Start/End: Complemental strand, 46815 - 46686
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgtt-tt 207  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||| ||| |||||||||||||| ||    
T  46815 aggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatatattttaaatcgaacaaaatcgtctttaaactatatgttttt 46716  T
Q  208 ttgcaattttagtcctatctccctatttcc 237  Q
    ||| | ||||||| ||||| ||||||||||    
T  46715 ttgtagttttagttctatcaccctatttcc 46686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 108 - 237
Target Start/End: Original strand, 46264 - 46394
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatg-ttt 206  Q
    |||||||||||  ||||||||||||   ||||||||||||| ||||||||||| ||| || ||||||||||||||||||  ||| ||||||||||| |||    
T  46264 aaggcttaattgcacttttggtcctcgcattttgaccaacttacgaaaatggttctacctcttttaaatcgaacaaaatcatccctaaactatatgtttt 46363  T
Q  207 tttgcaattttagtcctatctccctatttcc 237  Q
    |||||| |||||||| |||||||||||||||    
T  46364 tttgcagttttagtcatatctccctatttcc 46394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 49; Significance: 4e-19; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 224
Target Start/End: Complemental strand, 205918 - 205799
Alignment:
Q  105 attaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atg 203  Q
    |||||| |||||||| |||||| |||||   ||||||||||||||||||||||||||||  || ||| |||||||||||||  |||| |||||||| |||    
T  205918 attaagtcttaattacacttttagtcctcacattttgaccaactcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcatg 205819  T
Q  204 ttttttgcaattttagtccta 224  Q
     |||||||| |||||||||||    
T  205818 -tttttgcagttttagtccta 205799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 105 - 200
Target Start/End: Complemental strand, 210888 - 210793
Alignment:
Q  105 attaaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat 200  Q
    ||||||||||||||| ||||||||||||   ||||||||||||||| ||||||||||||  || ||| |||||||||||||  |||| ||||||||    
T  210888 attaaggcttaattacacttttggtcctcacattttgaccaactcatgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactat 210793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 208
Target Start/End: Original strand, 204931 - 205027
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgttttt 208  Q
    ||||||| ||||||||||||  ||||||||||| |||||||  ||||||||  || ||| ||||| ||||||||||||| |||||||| ||||||||    
T  204931 ttaattacacttttggtccttgtattttgaccagctcacgactatggtccttcctctttcaaatcaaacaaaattgtccctaaactatcatgttttt 205027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 208
Target Start/End: Original strand, 205361 - 205457
Alignment:
Q  113 ttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgttttt 208  Q
    ||||||| ||||||| ||||  ||||||||||| |||||||  ||||||||  || ||| |||||||||||| |||||| |||||||| ||||||||    
T  205361 ttaattacacttttgatccttgtattttgaccagctcacgactatggtccttcctctttcaaatcgaacaaatttgtccctaaactatcatgttttt 205457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1432 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1432
Description:

Target: scaffold1432; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 223
Target Start/End: Complemental strand, 612 - 498
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatatgttttt 208  Q
    ||||||||||| ||||||| ||||   |||||||| | ||||||||||||||| |  || ||| |||||||||||||  |||  ||||||||||||||||    
T  612 aggcttaattacacttttgatcctcgcattttgacgagctcacgaaaatggtcttgcctctttcaaatcgaacaaaacagtctctaaactatatgttttt 513  T
Q  209 tgcaattttagtcct 223  Q
    |||| |||| |||||    
T  512 tgcagttttggtcct 498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 78395 - 78444
Alignment:
Q  188 gtccttaaactatatgttttttgcaattttagtcctatctccctatttcc 237  Q
    |||| |||||||||||||||||||| ||||||||||||||| ||||||||    
T  78395 gtccctaaactatatgttttttgcagttttagtcctatctctctatttcc 78444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 208
Target Start/End: Complemental strand, 15644 - 15545
Alignment:
Q  110 ggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgttttt 208  Q
    |||||||||| | ||||||| ||   ||||||| || |||||||||||||||||  || ||| ||||||||||||| ||||| |||||||| ||||||||    
T  15644 ggcttaattagatttttggttctcgcattttgatcagctcacgaaaatggtcctgactctttcaaatcgaacaaaactgtccctaaactatcatgttttt 15545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 15111 - 15188
Alignment:
Q  108 aaggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaa 185  Q
    ||||||||||||||||||||||| |   |||||||||| ||| |||||||| | ||  || ||| |||||||||||||    
T  15111 aaggcttaattatacttttggtcatcgcattttgaccagctcgcgaaaatgattctgcctctttcaaatcgaacaaaa 15188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 221
Target Start/End: Complemental strand, 159390 - 159315
Alignment:
Q  147 ctcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactat-atgttttttgcaattttagtc 221  Q
    ||||||||||||||| | ||| ||| |||||||||||||| || | |||||||| || ||||||||| ||||||||    
T  159390 ctcacgaaaatggtcatgtctctttcaaatcgaacaaaatcgttcataaactatcatattttttgcagttttagtc 159315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 163
Target Start/End: Original strand, 1666 - 1720
Alignment:
Q  109 aggcttaattatacttttggtcctactattttgaccaactcacgaaaatggtcct 163  Q
    ||||||||||| |||||||||||| || ||||| || |||||||||| |||||||    
T  1666 aggcttaattacacttttggtcctcctgttttggcctactcacgaaactggtcct 1720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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