View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4515_low_27 (Length: 227)
Name: NF4515_low_27
Description: NF4515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4515_low_27 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 7 - 227
Target Start/End: Original strand, 2154504 - 2154724
Alignment:
| Q |
7 |
gaagcattaaagagcaattcctaaccctatattttatgttaaagttactcacatgtatttttaccaaatagttgattcaaatcaccaaatatatactaaa |
106 |
Q |
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| T |
2154504 |
gaagcattaaagagcaattcctaaccctatattttatgttaaagttactcacatgtatttttaccaaatagttgattcaaatcaccaaatatatactaca |
2154603 |
T |
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| Q |
107 |
agaataaacaaatcttatgaatcaattcatagaatgattcaatatttatttagaggcttcgacactagtgacattgtacaaagttttttaacaagagaat |
206 |
Q |
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| T |
2154604 |
agaataaacaaatcttatgaatcaatgcatagaatgattcaatatttatttagaggcttcgacactagtgacattgtacaaagttttttaacaagagaat |
2154703 |
T |
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| Q |
207 |
gtgagaaacaagaaaattttc |
227 |
Q |
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||||||||||||||||||||| |
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| T |
2154704 |
gtgagaaacaagaaaattttc |
2154724 |
T |
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