View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4515_low_5 (Length: 420)

Name: NF4515_low_5
Description: NF4515
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4515_low_5
NF4515_low_5
[»] chr8 (35 HSPs)
chr8 (127-405)||(38593839-38594117)
chr8 (12-131)||(16383372-16383491)
chr8 (12-128)||(34307214-34307330)
chr8 (12-128)||(24307779-24307895)
chr8 (12-131)||(16056387-16056506)
chr8 (12-131)||(30479460-30479579)
chr8 (12-127)||(32032724-32032838)
chr8 (45-131)||(24307624-24307710)
chr8 (22-131)||(504117-504226)
chr8 (22-128)||(14547920-14548026)
chr8 (22-126)||(12831047-12831151)
chr8 (22-126)||(15048178-15048281)
chr8 (22-126)||(15197333-15197437)
chr8 (22-126)||(23122593-23122697)
chr8 (22-126)||(40423939-40424043)
chr8 (12-127)||(17443824-17443939)
chr8 (22-131)||(43414577-43414686)
chr8 (22-126)||(1179936-1180040)
chr8 (21-129)||(10284626-10284734)
chr8 (22-128)||(4854859-4854965)
chr8 (22-124)||(10621083-10621185)
chr8 (22-126)||(34012292-34012396)
chr8 (12-131)||(5957825-5957944)
chr8 (12-127)||(37038478-37038593)
chr8 (12-107)||(8841418-8841513)
chr8 (12-131)||(38229424-38229542)
chr8 (12-82)||(32707989-32708061)
chr8 (22-127)||(44507083-44507188)
chr8 (12-128)||(15258915-15259031)
chr8 (21-128)||(42221513-42221620)
chr8 (12-126)||(20074928-20075034)
chr8 (22-82)||(9122229-9122289)
chr8 (58-126)||(14055624-14055692)
chr8 (88-121)||(9122200-9122233)
chr8 (71-127)||(25838196-25838252)
[»] chr1 (36 HSPs)
chr1 (12-131)||(5958986-5959105)
chr1 (12-126)||(50590986-50591100)
chr1 (12-126)||(41608479-41608593)
chr1 (12-126)||(47748443-47748556)
chr1 (22-129)||(32813244-32813351)
chr1 (22-131)||(38595149-38595258)
chr1 (22-126)||(3000319-3000423)
chr1 (26-129)||(2581912-2582015)
chr1 (22-126)||(9474872-9474976)
chr1 (22-126)||(27564731-27564835)
chr1 (12-130)||(44332357-44332468)
chr1 (22-136)||(8346384-8346498)
chr1 (22-128)||(38632317-38632423)
chr1 (12-128)||(45044546-45044662)
chr1 (22-126)||(48716278-48716382)
chr1 (12-127)||(37926424-37926539)
chr1 (22-128)||(49811523-49811629)
chr1 (22-126)||(47452316-47452420)
chr1 (22-121)||(44548372-44548471)
chr1 (12-127)||(51898669-51898784)
chr1 (22-127)||(41758804-41758909)
chr1 (22-127)||(50630457-50630562)
chr1 (21-125)||(44453980-44454084)
chr1 (22-126)||(26440734-26440838)
chr1 (22-126)||(43132-43236)
chr1 (22-126)||(37649198-37649302)
chr1 (12-126)||(6260870-6260984)
chr1 (12-106)||(11152364-11152458)
chr1 (22-121)||(26274437-26274536)
chr1 (21-126)||(3302528-3302633)
chr1 (56-129)||(23597121-23597194)
chr1 (54-122)||(34340067-34340134)
chr1 (12-127)||(7740732-7740847)
chr1 (22-96)||(13414791-13414865)
chr1 (56-129)||(44112800-44112872)
chr1 (26-83)||(48489343-48489400)
[»] chr6 (21 HSPs)
chr6 (12-129)||(30341346-30341463)
chr6 (12-128)||(15990028-15990144)
chr6 (12-126)||(15508010-15508124)
chr6 (12-126)||(4231548-4231662)
chr6 (22-131)||(17598549-17598658)
chr6 (22-127)||(31976247-31976352)
chr6 (22-119)||(32869685-32869782)
chr6 (22-121)||(22880654-22880753)
chr6 (12-121)||(28536474-28536581)
chr6 (12-126)||(31953016-31953130)
chr6 (22-129)||(6209461-6209568)
chr6 (22-130)||(31110757-31110863)
chr6 (22-127)||(11427615-11427722)
chr6 (22-110)||(31109396-31109484)
chr6 (12-126)||(29857827-29857941)
chr6 (12-131)||(12732477-12732596)
chr6 (12-130)||(15832573-15832691)
chr6 (12-122)||(9379698-9379808)
chr6 (12-82)||(30870058-30870128)
chr6 (22-130)||(23128123-23128231)
chr6 (60-127)||(22422052-22422119)
[»] chr5 (29 HSPs)
chr5 (12-129)||(3921251-3921368)
chr5 (12-127)||(2252154-2252269)
chr5 (16-128)||(39688887-39688999)
chr5 (22-126)||(28177775-28177879)
chr5 (22-127)||(6679697-6679802)
chr5 (22-131)||(18520880-18520989)
chr5 (23-130)||(13811648-13811755)
chr5 (12-126)||(26720516-26720630)
chr5 (12-126)||(26990265-26990379)
chr5 (22-128)||(36732938-36733044)
chr5 (22-127)||(2740273-2740378)
chr5 (22-126)||(35785199-35785303)
chr5 (22-126)||(40145407-40145511)
chr5 (22-126)||(42414298-42414402)
chr5 (22-128)||(15409606-15409712)
chr5 (12-126)||(35943878-35943992)
chr5 (12-133)||(14831807-14831928)
chr5 (22-126)||(33149634-33149738)
chr5 (12-130)||(31008984-31009102)
chr5 (67-131)||(36875644-36875708)
chr5 (21-128)||(9603811-9603918)
chr5 (12-121)||(16327906-16328015)
chr5 (63-122)||(10356638-10356698)
chr5 (12-126)||(6259987-6260101)
chr5 (12-126)||(33825310-33825424)
chr5 (21-82)||(21370048-21370109)
chr5 (22-103)||(39557513-39557594)
chr5 (61-129)||(38296200-38296268)
chr5 (56-100)||(32473328-32473371)
[»] chr4 (38 HSPs)
chr4 (12-130)||(19670702-19670820)
chr4 (12-128)||(55475189-55475305)
chr4 (13-128)||(32766956-32767071)
chr4 (12-127)||(47986207-47986322)
chr4 (12-127)||(50813878-50813993)
chr4 (12-126)||(55079699-55079814)
chr4 (12-108)||(17983729-17983825)
chr4 (12-128)||(29547945-29548061)
chr4 (12-126)||(8343149-8343263)
chr4 (12-127)||(44536732-44536846)
chr4 (12-126)||(18924481-18924595)
chr4 (12-118)||(29589726-29589831)
chr4 (12-131)||(50052414-50052533)
chr4 (22-126)||(6034044-6034148)
chr4 (22-126)||(41236347-41236451)
chr4 (12-126)||(11511448-11511562)
chr4 (22-128)||(48183045-48183151)
chr4 (22-131)||(480443-480552)
chr4 (12-128)||(29977883-29977999)
chr4 (12-129)||(29239883-29240000)
chr4 (22-131)||(42044363-42044472)
chr4 (22-126)||(31910192-31910296)
chr4 (22-126)||(54473529-54473633)
chr4 (21-126)||(3481654-3481759)
chr4 (22-127)||(29234241-29234346)
chr4 (22-126)||(40574779-40574883)
chr4 (12-128)||(48647712-48647828)
chr4 (12-127)||(28480254-28480369)
chr4 (12-127)||(28481129-28481244)
chr4 (12-127)||(28482004-28482119)
chr4 (12-126)||(50526157-50526271)
chr4 (22-128)||(23608233-23608339)
chr4 (22-128)||(24995103-24995209)
chr4 (22-82)||(41823926-41823986)
chr4 (12-85)||(56300151-56300224)
chr4 (21-122)||(18769113-18769214)
chr4 (22-122)||(53352562-53352661)
chr4 (12-84)||(47104586-47104658)
[»] chr7 (37 HSPs)
chr7 (12-127)||(22343360-22343475)
chr7 (12-127)||(41915740-41915855)
chr7 (12-128)||(38044195-38044311)
chr7 (12-134)||(7727898-7728020)
chr7 (12-131)||(8238207-8238327)
chr7 (12-126)||(32564412-32564526)
chr7 (12-126)||(40846099-40846213)
chr7 (22-125)||(35522877-35522980)
chr7 (22-128)||(7389387-7389493)
chr7 (22-126)||(19329842-19329946)
chr7 (12-128)||(36208171-36208287)
chr7 (22-121)||(3784000-3784099)
chr7 (22-128)||(8080379-8080485)
chr7 (12-130)||(18207176-18207293)
chr7 (22-127)||(36361909-36362014)
chr7 (22-126)||(4999510-4999614)
chr7 (12-128)||(19436173-19436289)
chr7 (22-126)||(38267040-38267144)
chr7 (22-130)||(38837213-38837321)
chr7 (22-121)||(3694372-3694471)
chr7 (36-126)||(46374812-46374902)
chr7 (22-127)||(3434561-3434666)
chr7 (22-131)||(35137528-35137637)
chr7 (22-127)||(36362025-36362130)
chr7 (12-126)||(39255910-39256023)
chr7 (61-129)||(10343598-10343666)
chr7 (23-126)||(21234401-21234504)
chr7 (22-129)||(40957704-40957811)
chr7 (21-131)||(35468850-35468960)
chr7 (22-127)||(26296643-26296748)
chr7 (21-121)||(2318238-2318338)
chr7 (22-127)||(46033797-46033902)
chr7 (56-126)||(41423682-41423752)
chr7 (22-121)||(32951489-32951588)
chr7 (22-126)||(31735884-31735981)
chr7 (21-129)||(11044185-11044283)
chr7 (56-120)||(43317566-43317629)
[»] chr2 (35 HSPs)
chr2 (12-131)||(45097721-45097840)
chr2 (12-126)||(43490121-43490235)
chr2 (12-126)||(38732354-38732468)
chr2 (12-131)||(13365346-13365467)
chr2 (12-108)||(2997473-2997569)
chr2 (22-126)||(40613898-40614002)
chr2 (22-128)||(9058478-9058584)
chr2 (22-128)||(10249378-10249484)
chr2 (12-129)||(26891490-26891607)
chr2 (21-130)||(33436095-33436204)
chr2 (22-126)||(28381651-28381755)
chr2 (22-130)||(42257189-42257297)
chr2 (22-121)||(28863460-28863559)
chr2 (26-127)||(32505648-32505749)
chr2 (22-126)||(40701478-40701582)
chr2 (22-121)||(19930816-19930915)
chr2 (22-127)||(7465731-7465836)
chr2 (12-76)||(3034969-3035033)
chr2 (22-126)||(13438343-13438447)
chr2 (22-126)||(17473020-17473124)
chr2 (22-130)||(38273138-38273246)
chr2 (22-133)||(30915456-30915567)
chr2 (22-127)||(5574484-5574589)
chr2 (12-126)||(17819990-17820104)
chr2 (12-130)||(20700811-20700929)
chr2 (20-126)||(27864704-27864810)
chr2 (21-127)||(33436210-33436316)
chr2 (22-127)||(2533123-2533227)
chr2 (61-126)||(4060685-4060750)
chr2 (22-127)||(36168835-36168940)
chr2 (12-120)||(3439985-3440093)
chr2 (56-128)||(15428770-15428842)
chr2 (12-83)||(3737986-3738057)
chr2 (12-121)||(41575142-41575252)
chr2 (61-129)||(38882849-38882916)
[»] chr3 (40 HSPs)
chr3 (12-126)||(45058539-45058652)
chr3 (12-104)||(36331315-36331407)
chr3 (12-123)||(42823114-42823225)
chr3 (22-126)||(26141528-26141632)
chr3 (22-126)||(53982011-53982115)
chr3 (12-123)||(26754698-26754809)
chr3 (12-126)||(8076393-8076507)
chr3 (22-128)||(11907369-11907475)
chr3 (12-126)||(14623825-14623939)
chr3 (22-136)||(31456679-31456793)
chr3 (22-128)||(41189760-41189866)
chr3 (22-128)||(54868891-54868997)
chr3 (23-128)||(27714888-27714993)
chr3 (22-126)||(33644200-33644304)
chr3 (22-126)||(47531865-47531969)
chr3 (22-130)||(49607410-49607518)
chr3 (22-122)||(52629304-52629404)
chr3 (12-121)||(13898041-13898150)
chr3 (22-127)||(17470404-17470509)
chr3 (22-130)||(11347918-11348026)
chr3 (22-126)||(20764911-20765015)
chr3 (21-121)||(30801728-30801828)
chr3 (22-126)||(51419356-51419460)
chr3 (61-128)||(11095388-11095455)
chr3 (22-121)||(48587087-48587186)
chr3 (12-127)||(24699940-24700055)
chr3 (12-127)||(25395319-25395434)
chr3 (61-128)||(33118886-33118953)
chr3 (12-127)||(35536625-35536740)
chr3 (56-127)||(36331408-36331479)
chr3 (12-127)||(48375692-48375807)
chr3 (61-129)||(36707459-36707527)
chr3 (12-127)||(8956761-8956876)
chr3 (12-121)||(25407133-25407243)
chr3 (23-128)||(35093583-35093688)
chr3 (12-126)||(41080709-41080821)
chr3 (60-128)||(1758490-1758560)
chr3 (56-129)||(4190170-4190242)
chr3 (55-128)||(35965803-35965876)
chr3 (56-100)||(9434247-9434290)
[»] scaffold0018 (1 HSPs)
scaffold0018 (12-113)||(152511-152612)
[»] scaffold0321 (1 HSPs)
scaffold0321 (22-131)||(10105-10214)
[»] scaffold0316 (1 HSPs)
scaffold0316 (10-83)||(17097-17170)
[»] scaffold0237 (1 HSPs)
scaffold0237 (12-126)||(4029-4143)
[»] scaffold1268 (1 HSPs)
scaffold1268 (12-126)||(915-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (12-126)||(915-1029)
[»] scaffold0110 (1 HSPs)
scaffold0110 (21-126)||(8858-8963)


Alignment Details
Target: chr8 (Bit Score: 242; Significance: 1e-134; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 127 - 405
Target Start/End: Original strand, 38593839 - 38594117
Alignment:
Q  127 tttttgtttttggtaaactagaaatactatgtggcttcataaatgatcttttcaacgacacttactcccatgnnnnnnngtaaaaaggtggagatggcta 226  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||       |||||||||||||||| ||||    
T  38593839 tttttgtttttggtaaactagaaatactatttggcttcatagatgatcttttcaacgacacttactcccatgtttttttgtaaaaaggtggagatagcta 38593938  T
Q  227 ctggacattcttggttttcgttgatgtttccatcgtatttagcatctctctaaaaattgtgaacttttttcgttgatgtttccttttattaaaaaggtgg 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  38593939 ctggacattcttggttttcgttgatgtttccatcgtatttagcatctctctaaaaattgtgaacttttttcgttgatgttcccttttattaaaaaggtgg 38594038  T
Q  327 agattttatgaagtatgtatatgaacatgaaatatcaaaaagctaatatacagtaaagattattggttaagaaaaagat 405  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38594039 agattttatgaagtatgtatatgaacatgaaatatcaaaaagctaatatacagtaaagattattggttaagaaaaagat 38594117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 16383491 - 16383372
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  16383491 agagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtt 16383392  T
Q  112 tatgtatcataactcttttt 131  Q
    ||||||||||||||||||||    
T  16383391 tatgtatcataactcttttt 16383372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 12 - 128
Target Start/End: Complemental strand, 34307330 - 34307214
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  34307330 agagaagaagaaagagaaagtgtacttgtgcggggttcatatgtccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtt 34307231  T
Q  112 tatgtatcataactctt 128  Q
    |||||||||||||||||    
T  34307230 tatgtatcataactctt 34307214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 12 - 128
Target Start/End: Original strand, 24307779 - 24307895
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||  | ||||||||||||||||||||||    
T  24307779 agagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatatcagatttttgtgtgggtgtcaagggatgtattgccacctaagggtgtt 24307878  T
Q  112 tatgtatcataactctt 128  Q
    |||||||||||||||||    
T  24307879 tatgtatcataactctt 24307895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 16056387 - 16056506
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  | ||||||| ||| ||||| ||||    
T  16056387 agagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataaggatgtt 16056486  T
Q  112 tatgtatcataactcttttt 131  Q
    ||||||||||||||||||||    
T  16056487 tatgtatcataactcttttt 16056506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 30479460 - 30479579
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||| ||||| ||||||  ||||||||||||||||||||||||    
T  30479460 agagaagaagaaagagaaagtgtacttgtgcgaggtccatatagccacatgtcagatttttatgtggatgtcaaagggtgtattgccacctaagggtgtt 30479559  T
Q  112 tatgtatcataactcttttt 131  Q
    ||||||||||||||| ||||    
T  30479560 tatgtatcataactcctttt 30479579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 32032838 - 32032724
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    ||||||| ||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||    
T  32032838 agagaaggagaaagagaaagtgtacttgtgcaggatccatatggccacatgtcagatttttgtgtggatgtcaa-ggatgtattgccacctaagggtgtt 32032740  T
Q  112 tatgtatcataactct 127  Q
    ||||||||||||||||    
T  32032739 tatgtatcataactct 32032724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 45 - 131
Target Start/End: Complemental strand, 24307710 - 24307624
Alignment:
Q  45 ggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcataactcttttt 131  Q
    |||||||||| |||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  24307710 ggtccatatggccacatatcagatttttgtgtgggtgtcaatggatgtattgccacctaagggtgtttatgtatcataactcttttt 24307624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 504117 - 504226
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    |||||||| |||| |||||||||||||||  || | || ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  504117 aaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcat 504216  T
Q  122 aactcttttt 131  Q
     |||| ||||    
T  504217 tactcatttt 504226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 14548026 - 14547920
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||||||||  || | || |||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||| |    
T  14548026 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagggtgtctatgtatctt 14547927  T
Q  122 aactctt 128  Q
     ||||||    
T  14547926 tactctt 14547920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 12831151 - 12831047
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||||||||  || | || |||||||||||||||||||||||||  ||||||||| ||||||||||||| ||||||||||    
T  12831151 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcat 12831052  T
Q  122 aactc 126  Q
     ||||    
T  12831051 tactc 12831047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 15048178 - 15048281
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||||||||| || | || |||||||||||||||| ||||||||  ||||||||||||||||||| ||| ||||||||||    
T  15048178 aaagagaaagtgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgt-ggtgtcaaagggtgtattgccacctaaggatgtctatgtatcat 15048276  T
Q  122 aactc 126  Q
    |||||    
T  15048277 aactc 15048281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 15197437 - 15197333
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||||||||  || | || |||||||||||||||||||||||||  |||||||||||||||||| |||| ||||||||||    
T  15197437 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcat 15197338  T
Q  122 aactc 126  Q
     ||||    
T  15197337 tactc 15197333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 23122593 - 23122697
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| ||| |||||||||||  || | || ||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||    
T  23122593 aaagagaaagtgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacttaagggtgtctatgtatcat 23122692  T
Q  122 aactc 126  Q
     ||||    
T  23122693 tactc 23122697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 40423939 - 40424043
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| ||||||||||||||| ||| | || |||||||||||||||||| ||||||  ||||||||||||||||||||| | ||||||||||    
T  40423939 aaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtatctatgtatcat 40424038  T
Q  122 aactc 126  Q
     ||||    
T  40424039 tactc 40424043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 17443939 - 17443824
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||||||| ||||||||||||||  ||||| |||||||| ||| | |||||||||||||||||||| |||| || | |||||||| ||||||||| |||     
T  17443939 agagaagatgaaagagaaagtgtctttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtc 17443840  T
Q  112 tatgtatcataactct 127  Q
    ||||||||||||||||    
T  17443839 tatgtatcataactct 17443824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 43414577 - 43414686
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||| ||||| || |||| ||| |||||||||||||||||||||  ||||| |||||| |||||| ||| ||||||||||    
T  43414577 aaagagaaagtgtgcttgtgcgggatccatgtgaccacgtgttagatttttgtgtgggtgtcaaagggtgtgttgccatctaaggatgtctatgtatcat 43414676  T
Q  122 aactcttttt 131  Q
    ||||| ||||    
T  43414677 aactcatttt 43414686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 1179936 - 1180040
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||  |||| ||| | || |||||||||||||||||||||||||  |||||||| |||||||||||||| ||||||||||    
T  1179936 aaagagaaagtgtgcttgtgcggaatccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcat 1180035  T
Q  122 aactc 126  Q
     ||||    
T  1180036 tactc 1180040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 129
Target Start/End: Original strand, 10284626 - 10284734
Alignment:
Q  21 gaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatca 120  Q
    |||||||||||||| |||||||||||||||  || | || ||||| |||||||||||||||||||   |||||||| ||| ||||||||| |||||||||    
T  10284626 gaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagagtgtattgtcacttaagggtgtctatgtatca 10284725  T
Q  121 taactcttt 129  Q
    |||||||||    
T  10284726 taactcttt 10284734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 4854859 - 4854965
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| ||||||| |||||||| || |||||| |||||||||| ||| ||||| ||  ||||||||||||||||||| ||| ||||||||||    
T  4854859 aaagagaaagtgtgcttgtgcagggtccatgtggccacatatcagatttttatgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcat 4854958  T
Q  122 aactctt 128  Q
     ||||||    
T  4854959 tactctt 4854965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 10621083 - 10621185
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||| || || || | || |||||||||||||||||||||||||  |||||||| |||||||||| ||| ||||||||||    
T  10621083 aaagagaaagtgtgcttgtgcgggatcgatgtggctacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcat 10621182  T
Q  122 aac 124  Q
    |||    
T  10621183 aac 10621185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 34012292 - 34012396
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||| ||||  || | || ||||| |||||||||||||||||||  |||||||| |||||||||||||| ||||||||||    
T  34012292 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcat 34012391  T
Q  122 aactc 126  Q
     ||||    
T  34012392 tactc 34012396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 5957944 - 5957825
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||| ||| ||||||||||||||  ||||||||| ||||  || | || |||||||||||||||||||||||||  ||||||||||||||||||  |||     
T  5957944 agaggagaggaaagagaaagtgtgattgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagaatgtc 5957845  T
Q  112 tatgtatcataactcttttt 131  Q
    |||||||||| ||| |||||    
T  5957844 tatgtatcattacttttttt 5957825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 37038593 - 37038478
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||| ||| |||| ||||||||| |||||||||| ||||  || | || |||||||||||||||||||||||||  ||||||||||||||||| | |||     
T  37038593 agaggagaggaaatagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtc 37038494  T
Q  112 tatgtatcataactct 127  Q
    |||||||||| |||||    
T  37038493 tatgtatcattactct 37038478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 107
Target Start/End: Original strand, 8841418 - 8841513
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaaggg 107  Q
    |||| ||| |||||||||||||| |||||||||||||||  || | || ||| |||||||||||||||||||||  |||||| |||||||||||||    
T  8841418 agaggagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaaggg 8841513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 38229542 - 38229424
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||||||| |||||||||| ||| ||||| | |  ||||  || |||||||||||||||||||||||||||||  ||  ||||||||||||||| |||||    
T  38229542 agagaagaggaaagagaaaatgtgcttgtacagaatccacgtgaccacatgtcagatttttgtgtgggtgtcaggagc-gtattgccacctaagagtgtt 38229444  T
Q  112 tatgtatcataactcttttt 131  Q
     |||||||||||||| ||||    
T  38229443 catgtatcataactcatttt 38229424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 12 - 82
Target Start/End: Original strand, 32707989 - 32708061
Alignment:
Q  12 agagaagaagaaagagaaagtgt--acttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgt 82  Q
    |||||||||||||||||||||||  |||||||||||||||||||  |||||| |||||||||||| |||||||    
T  32707989 agagaagaagaaagagaaagtgtgtacttgtgcggggtccatatagccacatctcagatttttgtatgggtgt 32708061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 127
Target Start/End: Original strand, 44507083 - 44507188
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||| | ||||| |||||||||  || | || |||||||||||||||||||||| ||   ||||||| |||||||||||||| ||||||||||    
T  44507083 aaagagaaagtatgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaagggtgtctatgtatcat 44507182  T
Q  122 aactct 127  Q
     |||||    
T  44507183 tactct 44507188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 12 - 128
Target Start/End: Original strand, 15258915 - 15259031
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||| ||| |||||||||| ||| ||||||| |||||||  || ||||||||||||||||| ||||| |||| |  | |||||||||| ||||| || |     
T  15258915 agaggagaggaaagagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagatttttatgtggatgtccagggatgtattgccatctaagagtatc 15259014  T
Q  112 tatgtatcataactctt 128  Q
    |||||||||||||||||    
T  15259015 tatgtatcataactctt 15259031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 21 - 128
Target Start/End: Complemental strand, 42221620 - 42221513
Alignment:
Q  21 gaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatca 120  Q
    |||||||||||||| |||||  ||||||||||||   || ||||||||||||||||||||||| |    ||||||| ||||||||| ||| |||||||||    
T  42221620 gaaagagaaagtgtgcttgtatggggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatgtattgtcacctaaggatgtatatgtatca 42221521  T
Q  121 taactctt 128  Q
    | ||||||    
T  42221520 ttactctt 42221513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 20074928 - 20075034
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||||||| |||||||||||||| ||||||| |||||||        | ||||| |||||| ||||||||||||   |||||||||||||||||| |||     
T  20074928 agagaagaggaaagagaaagtgtgcttgtgcagggtcca--------cgtgtcacatttttatgtgggtgtcaaagagtgtattgccacctaaggatgtc 20075019  T
Q  112 tatgtatcataactc 126  Q
    |||||||||| ||||    
T  20075020 tatgtatcattactc 20075034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 9122289 - 9122229
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgt 82  Q
    ||||||||||||| |||||||||| ||||  || | |||||||||||||||||||||||||    
T  9122289 aaagagaaagtgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtgt 9122229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 58 - 126
Target Start/End: Original strand, 14055624 - 14055692
Alignment:
Q  58 acatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcataactc 126  Q
    |||||| |||||||||||||| ||||||   |||||||| |||||||||||||  ||||||||||||||    
T  14055624 acatgtaagatttttgtgtggatgtcaaggagtgtattgtcacctaagggtgtcaatgtatcataactc 14055692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 121
Target Start/End: Complemental strand, 9122233 - 9122200
Alignment:
Q  88 ggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||||||||||||| ||||||||||    
T  9122233 ggtgtattgccacctaagggtgtctatgtatcat 9122200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 127
Target Start/End: Complemental strand, 25838252 - 25838196
Alignment:
Q  71 ttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcataactct 127  Q
    |||||||| |||||| | |||||||||||||||||| | | ||| ||||||||||||    
T  25838252 ttgtgtggatgtcaaaaagtgtattgccacctaaggatatctatttatcataactct 25838196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 108; Significance: 4e-54; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 5958986 - 5959105
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  5958986 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagaggtgtattgccacttaagggtgtt 5959085  T
Q  112 tatgtatcataactcttttt 131  Q
    ||||||||||||||||||||    
T  5959086 tatgtatcataactcttttt 5959105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 50590986 - 50591100
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  50590986 agagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtt 50591085  T
Q  112 tatgtatcataactc 126  Q
    |||||||||||||||    
T  50591086 tatgtatcataactc 50591100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 41608479 - 41608593
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||  ||||||||||||||||||| ||||    
T  41608479 agagaagaagaaagagaaagtgtacttgtacggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaaggatgtt 41608578  T
Q  112 tatgtatcataactc 126  Q
    |||||||||||||||    
T  41608579 tatgtatcataactc 41608593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 47748556 - 47748443
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    ||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||| | ||||||||||  ||||||||||||||||||||| ||    
T  47748556 agagaagaagaaagagaaagtatacttgtgcgggatccatatggccacatgtcagatttttatatgggtgtcaa-gggtgtattgccacctaagggtatt 47748458  T
Q  112 tatgtatcataactc 126  Q
    |||||||||||||||    
T  47748457 tatgtatcataactc 47748443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 32813351 - 32813244
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||||||||| || |||| |||||||||||||||||||||| ||  ||||||||||||||||||| ||| ||||||||||    
T  32813351 aaagagaaagtgtgcttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcat 32813252  T
Q  122 aactcttt 129  Q
    ||||||||    
T  32813251 aactcttt 32813244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 38595258 - 38595149
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| ||||| |||||||||  || | || |||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||    
T  38595258 aaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaaggtgtttatgtatcat 38595159  T
Q  122 aactcttttt 131  Q
     |||||||||    
T  38595158 tactcttttt 38595149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 3000423 - 3000319
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| ||||| |||||||||  || | || |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  3000423 aaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcat 3000324  T
Q  122 aactc 126  Q
     ||||    
T  3000323 tactc 3000319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 26 - 129
Target Start/End: Complemental strand, 2582015 - 2581912
Alignment:
Q  26 agaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcataact 125  Q
    ||||||||| |||||||||||||||  || | || |||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||| |||    
T  2582015 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 2581916  T
Q  126 cttt 129  Q
    ||||    
T  2581915 cttt 2581912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 9474872 - 9474976
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    |||||||||||||  ||||||||||||||  || | || |||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||    
T  9474872 aaagagaaagtgtgtttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 9474971  T
Q  122 aactc 126  Q
     ||||    
T  9474972 tactc 9474976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 27564731 - 27564835
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||||||||  ||   || ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||    
T  27564731 aaagagaaagtgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcat 27564830  T
Q  122 aactc 126  Q
     ||||    
T  27564831 tactc 27564835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 44332357 - 44332468
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    ||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||| |||||||||||| || | |||||        |||||||    
T  44332357 agagaagaagaaagagaaagtatacttgtgcggggtccatagggccacatgtcagatttttatgtgggtgtcaagagatatattg-------tgggtgtt 44332449  T
Q  112 tatgtatcataactctttt 130  Q
    |||||||||||||||||||    
T  44332450 tatgtatcataactctttt 44332468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 8346384 - 8346498
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| ||||||| |||||||  || | || |||||||||||||||||||||||||  ||||||||||||||||| ||||  ||||||||||    
T  8346384 aaagagaaagtgtgcttgtgcagggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaaggtgactatgtatcat 8346483  T
Q  122 aactctttttgtttt 136  Q
     ||||||||| ||||    
T  8346484 tactctttttttttt 8346498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 38632317 - 38632423
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||| ||||||| |||||||||||||||  || | || |||||||||||||||||| ||| || |||||||||||||||||||||||| ||||||||||    
T  38632317 aaagaaaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaaaggtgtattgccacctaagggtgtctatgtatcat 38632416  T
Q  122 aactctt 128  Q
     ||||||    
T  38632417 tactctt 38632423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 128
Target Start/End: Original strand, 45044546 - 45044662
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    ||||||||  ||||||||| |||  ||||||||||||||| || | ||||||||||||||||| ||||||||||  |||||||||||||||||||   |     
T  45044546 agagaagagaaaagagaaaatgtgtttgtgcggggtccatgtggctacatgtcagatttttgtatgggtgtcaaatggtgtattgccacctaaggaaatg 45044645  T
Q  112 tatgtatcataactctt 128  Q
    |||||||||||||||||    
T  45044646 tatgtatcataactctt 45044662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 48716278 - 48716382
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||| ||||||| |||||||||||||||  || | || |||||||||||||||||| ||||||  ||||||||||||||||||||||| ||||||||||    
T  48716278 aaagataaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcat 48716377  T
Q  122 aactc 126  Q
     ||||    
T  48716378 tactc 48716382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 37926424 - 37926539
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    ||||||||  ||||||||||||||||||| |||| ||||| || |||| |||||||||||| ||||||||| || || ||||||||||||||| | | |     
T  37926424 agagaagagaaaagagaaagtgtacttgtacgggatccatgtggccacgtgtcagatttttatgtgggtgttaaaagatgtattgccacctaaagatatc 37926523  T
Q  112 tatgtatcataactct 127  Q
    ||||||||||||||||    
T  37926524 tatgtatcataactct 37926539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 49811523 - 49811629
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| ||||||||| ||| ||||| | || |||||||||||||||||| ||||||  ||||||||| ||||||||| ||| ||| ||||||    
T  49811523 aaagagaaagtgtgcttgtgcggagtctatatggctacgtgtcagatttttgtgtggatgtcaaatggtgtattgtcacctaaggatgtctatctatcat 49811622  T
Q  122 aactctt 128  Q
    |||||||    
T  49811623 aactctt 49811629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 47452316 - 47452420
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||| ||||  || | || ||| |||||||||||||||||||||  |||||||| |||||||||||||| ||||||||||    
T  47452316 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcat 47452415  T
Q  122 aactc 126  Q
     ||||    
T  47452416 tactc 47452420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 22 - 121
Target Start/End: Original strand, 44548372 - 44548471
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||||||||  || | || |||||||||||||||||||| ||||  ||||||||||||||||| | ||| ||||||||||    
T  44548372 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaatggtgtattgccacctaaagatgtctatgtatcat 44548471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 51898669 - 51898784
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||| ||| |||| ||||||||| |||||||||| ||||  || | || |||||||||||||||||||||||||  ||||||||||||||||| | |||     
T  51898669 agaggagaggaaatagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtc 51898768  T
Q  112 tatgtatcataactct 127  Q
    |||||||||| |||||    
T  51898769 tatgtatcattactct 51898784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 127
Target Start/End: Complemental strand, 41758909 - 41758804
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    |||||||||||||  ||||||||||||||| || | || |||||||||||||||||| ||||||  ||||||||||||  ||| ||||| ||||||||||    
T  41758909 aaagagaaagtgtgtttgtgcggggtccatgtgactacgtgtcagatttttgtgtggttgtcaaagggtgtattgccatttaatggtgtctatgtatcat 41758810  T
Q  122 aactct 127  Q
     |||||    
T  41758809 tactct 41758804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 127
Target Start/End: Complemental strand, 50630562 - 50630457
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||||||||  || | || ||||||||||||||||||||  |||  | ||||||||||||||||||| | ||||||||||    
T  50630562 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtaacaaaggatgtattgccacctaagggtatctatgtatcat 50630463  T
Q  122 aactct 127  Q
     |||||    
T  50630462 tactct 50630457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 21 - 125
Target Start/End: Complemental strand, 44454084 - 44453980
Alignment:
Q  21 gaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatca 120  Q
    |||||| ||||||| |||||| ||| ||||  |  ||||||||||||||||||||||||| |||| || ||||||||||| ||| ||||| |||||||||    
T  44454084 gaaagaaaaagtgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtgtgggtatcaagagatgtattgccacttaaaggtgtctatgtatca 44453985  T
Q  121 taact 125  Q
    |||||    
T  44453984 taact 44453980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 26440838 - 26440734
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| ||| |||||| ||||| || |||| |||||||||||||||||||||| ||  ||||||||| || |||||| ||| ||| |||| |    
T  26440838 aaagagaaagtgtgcttatgcgggatccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtattgtcatctaaggatgtctatctatcct 26440739  T
Q  122 aactc 126  Q
    |||||    
T  26440738 aactc 26440734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 43236 - 43132
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| ||||||||| |||||  || | || |||||||||||||||||||||||||  | ||||||| | ||||||  ||| ||||||||||    
T  43236 aaagagaaagtgtgcttgtgcggagtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtctcctaagactgtctatgtatcat 43137  T
Q  122 aactc 126  Q
     ||||    
T  43136 tactc 43132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 37649302 - 37649198
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    |||| |||||||| |||||||||  | ||  || |||| |||||||||||||||||||||||||   |||||||||||||||| | ||| ||||||||||    
T  37649302 aaagggaaagtgtgcttgtgcggaattcacgtgaccacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaagatgtctatgtatcat 37649203  T
Q  122 aactc 126  Q
     ||||    
T  37649202 tactc 37649198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 6260984 - 6260870
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||| |||||||| ||||| ||| ||| |||||||||||  || |||||||| |||||||| |||||||||  |  |||||||| |||||||||| | |     
T  6260984 agaggagaagaaatagaaaatgtgcttatgcggggtccacgtgaccacatgttagatttttatgtgggtgttcaggggtgtattaccacctaaggatatc 6260885  T
Q  112 tatgtatcataactc 126  Q
    ||| |||||||||||    
T  6260884 tatctatcataactc 6260870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 12 - 106
Target Start/End: Original strand, 11152364 - 11152458
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagg 106  Q
    |||| ||| |||| |||||| || ||||||||||||| | ||| | || |||||||||||||||||| |||| |  |||||||||||||||||||    
T  11152364 agaggagaggaaaaagaaagcgtgcttgtgcggggtctacatgactacgtgtcagatttttgtgtggatgtcgaagggtgtattgccacctaagg 11152458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 121
Target Start/End: Complemental strand, 26274536 - 26274437
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||| ||||||||||||||| || ||||  || | |  |||||||||||| ||||| ||||||  | ||||||||||| ||||||||| ||||||||||    
T  26274536 aaagaaaaagtgtacttgtgcaggatccacgtgactatgtgtcagatttttctgtggatgtcaaatgatgtattgccacataagggtgtctatgtatcat 26274437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 3302528 - 3302633
Alignment:
Q  21 gaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatca 120  Q
    |||| ||||||||| |||||  ||||||||||||   || ||||||||||||||||||||||| |    | ||||| ||||||||| ||| |||||||||    
T  3302528 gaaaaagaaagtgtgcttgtatggggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatatattgtcacctaaggatgtatatgtatca 3302627  T
Q  121 taactc 126  Q
    | ||||    
T  3302628 ttactc 3302633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 23597121 - 23597194
Alignment:
Q  56 ccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcataactcttt 129  Q
    |||| |||||||||||| ||||||| ||||   |||||||||||||||| | ||| |||||||||| |||||||    
T  23597121 ccacgtgtcagatttttatgtgggtatcaaagagtgtattgccacctaatgatgtctatgtatcattactcttt 23597194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 34340067 - 34340134
Alignment:
Q  54 gtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcata 122  Q
    |||||| ||||||||||||||||||   |||| ||||||||| ||||||||| |||| |||||||||||    
T  34340067 gtccacgtgtcagatttttgtgtggca-tcaacaggtgtattaccacctaagagtgtctatgtatcata 34340134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 7740847 - 7740732
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||| ||| |||| ||||| | || ||||| |||||||| ||  |||| ||||| |||||| ||| ||||||||| | ||||||| ||| ||||| |||     
T  7740847 agaggagatgaaaaagaaaatatatttgtgtggggtccacatagccacgtgtcatatttttatgtaggtgtcaatggatgtattgtcacataaggttgtc 7740748  T
Q  112 tatgtatcataactct 127  Q
     |||||||||||||||    
T  7740747 aatgtatcataactct 7740732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 96
Target Start/End: Complemental strand, 13414865 - 13414791
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattg 96  Q
    ||||||||| ||| |||||| ||||||||  || | || ||| |||||||||||||||||||||  |||||||||    
T  13414865 aaagagaaaatgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattg 13414791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 44112800 - 44112872
Alignment:
Q  56 ccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcataactcttt 129  Q
    |||||||||||| |||||||||||||| || |||||||||||||| | | |||||  ||||||||  |||||||    
T  44112800 ccacatgtcagaattttgtgtgggtgt-aagaggtgtattgccacatgaaggtgtacatgtatcaccactcttt 44112872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 48489400 - 48489343
Alignment:
Q  26 agaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtc 83  Q
    ||||| ||| |||||||||| ||||  || ||||||||||||||||||||||| ||||    
T  48489400 agaaaatgtgcttgtgcgggatccacgtgaccacatgtcagatttttgtgtggatgtc 48489343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 106; Significance: 7e-53; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 12 - 129
Target Start/End: Original strand, 30341346 - 30341463
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  30341346 agagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtt 30341445  T
Q  112 tatgtatcataactcttt 129  Q
    ||||||||||||||||||    
T  30341446 tatgtatcataactcttt 30341463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 12 - 128
Target Start/End: Original strand, 15990028 - 15990144
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  15990028 agagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtt 15990127  T
Q  112 tatgtatcataactctt 128  Q
    |||||||||||||||||    
T  15990128 tatgtatcataactctt 15990144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 15508010 - 15508124
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  15508010 agagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtt 15508109  T
Q  112 tatgtatcataactc 126  Q
    |||||||||||||||    
T  15508110 tatgtatcataactc 15508124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 4231662 - 4231548
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||  ||||||||||||||||| | ||||    
T  4231662 agagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacgtgtcagatttttgtgtgggtggcaaggggtgtattgccacctaatgatgtt 4231563  T
Q  112 tatgtatcataactc 126  Q
    |||| ||||||||||    
T  4231562 tatgaatcataactc 4231548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 17598658 - 17598549
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||||||||  || | || ||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||    
T  17598658 aaagagaaagtgtgcttgtgcggggtccacgtgacaacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcat 17598559  T
Q  122 aactcttttt 131  Q
     |||| ||||    
T  17598558 tactcatttt 17598549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 127
Target Start/End: Complemental strand, 31976352 - 31976247
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||||| ||| || |||| |||||||||||||||||||||| ||  ||| ||||||||||||||| ||| ||||||||||    
T  31976352 aaagagaaagtgtgcttgtgcggggttcatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtatattgccacctaaggatgtctatgtatcat 31976253  T
Q  122 aactct 127  Q
    ||||||    
T  31976252 aactct 31976247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 32869782 - 32869685
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatc 119  Q
    ||||||||||||| |||||||||||||||  || | || |||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||    
T  32869782 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatc 32869685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 22 - 121
Target Start/End: Original strand, 22880654 - 22880753
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||||||||  || | || ||||||| |||||||||||||||||  ||||||||||||||||||||||| ||||||||||    
T  22880654 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagaattttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 22880753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 121
Target Start/End: Original strand, 28536474 - 28536581
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    ||||||||  ||||||||||||| |||||| |||||||| ||| ||   |||||||||||||||||||||||||  | ||||||||||||||||| ||||    
T  28536474 agagaagataaaagagaaagtgtgcttgtgtggggtccacatgaccg--tgtcagatttttgtgtgggtgtcaagggttgtattgccacctaaggatgtt 28536571  T
Q  112 tatgtatcat 121  Q
    ||||||||||    
T  28536572 tatgtatcat 28536581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 31953016 - 31953130
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||||||| ||||||||||||||  ||||| | |||||| |||  |||||||||||||||| ||||||||||||  ||||||||||||||||||| |||     
T  31953016 agagaagatgaaagagaaagtgtgtttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtc 31953115  T
Q  112 tatgtatcataactc 126  Q
    ||| |||||| ||||    
T  31953116 tatctatcattactc 31953130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 22 - 129
Target Start/End: Original strand, 6209461 - 6209568
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| || ||||||||||||  || | || || |||||||||||||| |||||||   |||||||||||||||||||||| ||||||||||    
T  6209461 aaagagaaagtgtgctagtgcggggtccacgtgactacgtgacagatttttgtgtgagtgtcaaatagtgtattgccacctaagggtgtctatgtatcat 6209560  T
Q  122 aactcttt 129  Q
     |||||||    
T  6209561 tactcttt 6209568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 130
Target Start/End: Original strand, 31110757 - 31110863
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| ||||||| |||||||| ||   || ||||||||||||||| |  ||||||  ||||||||||||||||||| ||| ||||||||||    
T  31110757 aaagagaaagtgtgcttgtgcagggtccatgtggttacgtgtcagatttttgtgag--tgtcaaagggtgtattgccacctaaggatgtctatgtatcat 31110854  T
Q  122 aactctttt 130  Q
    |||||||||    
T  31110855 aactctttt 31110863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 22 - 127
Target Start/End: Complemental strand, 11427722 - 11427615
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccaccta--agggtgtttatgtatc 119  Q
    ||||||||||||| |||||||||| ||||  || | || |||||||||||||||||||||||||  | ||||||||||||||  ||||||| ||||||||    
T  11427722 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagagggtgtctatgtatc 11427623  T
Q  120 ataactct 127  Q
    || |||||    
T  11427622 attactct 11427615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 22 - 110
Target Start/End: Original strand, 31109396 - 31109484
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgt 110  Q
    ||||||||||||||||| ||||||||| |  || | || |||||||||||||||||| ||||||  |||||||||||||||||||||||    
T  31109396 aaagagaaagtgtacttttgcggggtctacgtgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgt 31109484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 29857941 - 29857827
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    ||||||||  ||||||||||||| ||| |||||| ||||  |  | || |||||||||||||||||||||| || ||||||||||||| |||| |||||     
T  29857941 agagaagagaaaagagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtc 29857842  T
Q  112 tatgtatcataactc 126  Q
    |||||||||| ||||    
T  29857841 tatgtatcattactc 29857827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 12732596 - 12732477
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||| ||| |||||||||| ||| ||| || ||| |||| ||  |||| ||||||||||||||||||||||||||   | ||||||||| ||||  |||     
T  12732596 agaggagatgaaagagaaaatgtgcttatgtgggatccacatagccacgtgtcagatttttgtgtgggtgtcaatgattatattgccacttaagaatgtc 12732497  T
Q  112 tatgtatcataactcttttt 131  Q
    |||||||||| |||||||||    
T  12732496 tatgtatcattactcttttt 12732477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 15832691 - 15832573
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||| |||| ||||||||| |||| |||||| || ||||  || | || ||||| |||||||||||||||||||  | | ||||| ||||||| |||||     
T  15832691 agaggagaaaaaagagaaaatgtatttgtgcaggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaatgatttattgtcacctaaaggtgtc 15832592  T
Q  112 tatgtatcataactctttt 130  Q
    |||||||||| ||||||||    
T  15832591 tatgtatcattactctttt 15832573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 122
Target Start/End: Original strand, 9379698 - 9379808
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||||||| |||||||||| |||  ||||| | | |||| ||| |||| ||||| |||||||| ||||||||||  | ||||||| || |||||| |||     
T  9379698 agagaagatgaaagagaaaatgtgtttgtgtgagatccacatggccacgtgtcaaatttttgtatgggtgtcaagggatgtattgtcatctaaggatgtc 9379797  T
Q  112 tatgtatcata 122  Q
    |||||||||||    
T  9379798 tatgtatcata 9379808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 30870128 - 30870058
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgt 82  Q
    |||| ||| |||||||||| ||| |||||||||||||||| || |||||||| |||||||| | |||||||    
T  30870128 agaggagaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacatgttagatttttatatgggtgt 30870058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 130
Target Start/End: Original strand, 23128123 - 23128231
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||| ||| ||||  || | || |||||||||||||||||||||||||  | ||||||  ||| ||| ||||| ||| ||||||    
T  23128123 aaagagaaagtgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattatcacataaaggtgtctatatatcat 23128222  T
Q  122 aactctttt 130  Q
     | ||||||    
T  23128223 tattctttt 23128231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 60 - 127
Target Start/End: Original strand, 22422052 - 22422119
Alignment:
Q  60 atgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcataactct 127  Q
    |||||||| |||||| || ||||||| || | ||||||||||||||| ||| |||||||||| |||||    
T  22422052 atgtcagaattttgtatgagtgtcaagagatctattgccacctaaggatgtctatgtatcattactct 22422119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 106; Significance: 7e-53; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 12 - 129
Target Start/End: Original strand, 3921251 - 3921368
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  3921251 agagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtt 3921350  T
Q  112 tatgtatcataactcttt 129  Q
    ||||||||||||||||||    
T  3921351 tatgtatcataactcttt 3921368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 2252154 - 2252269
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||    
T  2252154 agagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaggatgtt 2252253  T
Q  112 tatgtatcataactct 127  Q
    ||||||||||||||||    
T  2252254 tatgtatcataactct 2252269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 39688887 - 39688999
Alignment:
Q  16 aagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatg 115  Q
    ||||||||||||||||||||||| |||||||| |||||| |||||| |||||||||||||||||||||||  | ||||||||||| ||||||||||||||    
T  39688887 aagaagaaagagaaagtgtacttatgcggggttcatatgaccacatatcagatttttgtgtgggtgtcaagggatgtattgccacttaagggtgtttatg 39688986  T
Q  116 tatcataactctt 128  Q
    |||||||||||||    
T  39688987 tatcataactctt 39688999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 28177879 - 28177775
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    |||||||||||||  ||||||||||||||| || |||| |||||||||||||||||||||||||  ||||||||||||||||||| ||| ||||||||||    
T  28177879 aaagagaaagtgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcat 28177780  T
Q  122 aactc 126  Q
    |||||    
T  28177779 aactc 28177775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 22 - 127
Target Start/End: Complemental strand, 6679802 - 6679697
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||| |||  ||||||||||||||| || |||| ||||||||||||||||||||||||| |||||||||||||||||| | ||| ||||||||||    
T  6679802 aaagagaaaatgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaagatgtctatgtatcat 6679703  T
Q  122 aactct 127  Q
    ||||||    
T  6679702 aactct 6679697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 18520880 - 18520989
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||||||||  || | || |||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||    
T  18520880 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 18520979  T
Q  122 aactcttttt 131  Q
     | |||||||    
T  18520980 tattcttttt 18520989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 13811755 - 13811648
Alignment:
Q  23 aagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcata 122  Q
    |||||||||||| |||||||||||||||  || | || |||||||||||||||||||||||||  | ||||||||||||||||||||| |||||||| |     
T  13811755 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatcttt 13811656  T
Q  123 actctttt 130  Q
    ||||||||    
T  13811655 actctttt 13811648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 26720630 - 26720516
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    ||||||||  ||||||||||||| |||||||||| ||||| || |||| |||||||||||| ||| ||||| ||  ||||||||||||||||||| |||     
T  26720630 agagaagagaaaagagaaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtc 26720531  T
Q  112 tatgtatcataactc 126  Q
    |||||||||||||||    
T  26720530 tatgtatcataactc 26720516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 26990379 - 26990265
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    ||||||||  ||||||||||||| |||||||||| ||||| || |||| |||||||||||| ||| ||||| ||  ||||||||||||||||||| |||     
T  26990379 agagaagagaaaagagaaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtc 26990280  T
Q  112 tatgtatcataactc 126  Q
    |||||||||||||||    
T  26990279 tatgtatcataactc 26990265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 36732938 - 36733044
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||||||||  || | |  |||||||||||||||||||||||||  |||||||||| |||||||||||| ||||||||||    
T  36732938 aaagagaaagtgtgcttgtgcggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagggtgtattgctacctaagggtgtctatgtatcat 36733037  T
Q  122 aactctt 128  Q
     ||||||    
T  36733038 tactctt 36733044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 22 - 127
Target Start/End: Complemental strand, 2740378 - 2740273
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||| ||||  || | || |||||||||||||||||||||||||  ||||||||||||||||||| ||| ||||||||||    
T  2740378 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcat 2740279  T
Q  122 aactct 127  Q
     |||||    
T  2740278 tactct 2740273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 35785303 - 35785199
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    |||||||||||||  ||||||||| ||||  |  | || ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  35785303 aaagagaaagtgtgattgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcat 35785204  T
Q  122 aactc 126  Q
     ||||    
T  35785203 tactc 35785199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 40145511 - 40145407
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||||||||  || | || |||||||||||||||||| ||| ||  ||||||||||||||||||||||| ||||||||||    
T  40145511 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaagggtgtattgccacctaagggtgtctatgtatcat 40145412  T
Q  122 aactc 126  Q
     ||||    
T  40145411 tactc 40145407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 42414298 - 42414402
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||| ||||||| ||||||||||||||| ||| | || |||||||||||||||||||||||||  ||||||||||||||||  ||||| ||||||||||    
T  42414298 aaagataaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctactggtgtctatgtatcat 42414397  T
Q  122 aactc 126  Q
     ||||    
T  42414398 tactc 42414402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 15409606 - 15409712
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||| ||||| |||||||||||||||| || | || |||||||||||||||||||||||||    ||||||| ||||||||| ||| ||||||||||    
T  15409606 aaagagagagtgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgtcaaagaatgtattgtcacctaaggatgtctatgtatcat 15409705  T
Q  122 aactctt 128  Q
    |||||||    
T  15409706 aactctt 15409712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 35943878 - 35943992
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||| ||| |||||||||||||| |||||| ||| ||||  |  | || |||||||||||||||||||||||||  | |||||||||||||||||||||     
T  35943878 agaggagaggaaagagaaagtgtgcttgtgtgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtc 35943977  T
Q  112 tatgtatcataactc 126  Q
    |||||||||||||||    
T  35943978 tatgtatcataactc 35943992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 12 - 133
Target Start/End: Complemental strand, 14831928 - 14831807
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||| |||| ||| ||||||||| |||||||||| ||||  || | || |||||||||||| ||||||||||||  |||||||||||||||||| ||||     
T  14831928 agaggagaaaaaaaagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtc 14831829  T
Q  112 tatgtatcataactctttttgt 133  Q
    |||||||||| |||| ||||||    
T  14831828 tatgtatcattactcattttgt 14831807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 33149634 - 33149738
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||| ||||  || | || ||||| |||||||||||||||||||  |||||||| |||||||||||||| ||||||||||    
T  33149634 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcat 33149733  T
Q  122 aactc 126  Q
     ||||    
T  33149734 tactc 33149738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 31009102 - 31008984
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||||||| |||| ||||||||| |||||||||| ||||  || | || ||||||||||||||||||||||  |    ||||||| ||||||||| ||||    
T  31009102 agagaagaggaaatagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtggaagaatgtattgtcacctaaggatgtt 31009003  T
Q  112 tatgtatcataactctttt 130  Q
    |||||||||||||||||||    
T  31009002 tatgtatcataactctttt 31008984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 36875644 - 36875708
Alignment:
Q  67 atttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcataactcttttt 131  Q
    |||||||||||||||||||  ||||||||||||||||||||||| |||||||||| ||| |||||    
T  36875644 atttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattacttttttt 36875708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 21 - 128
Target Start/End: Complemental strand, 9603918 - 9603811
Alignment:
Q  21 gaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatca 120  Q
    ||||||||||||||  ||||  |||||||||||| |||  |||||||||||||||| ||||| |||  |||||||  ||||||||| ||| |||||||||    
T  9603918 gaaagagaaagtgtgattgtatggggtccatatgaccatgtgtcagatttttgtgtaggtgtgaatgagtgtattatcacctaaggatgtatatgtatca 9603819  T
Q  121 taactctt 128  Q
    | ||||||    
T  9603818 ttactctt 9603811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 121
Target Start/End: Complemental strand, 16328015 - 16327906
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||||| | |||||| ||||||| |||||| | ||| || |||  ||| |||||||||||| ||||||||||||| | ||||||||||||||||| | ||    
T  16328015 agagaaaatgaaagaaaaagtgtgcttgtgtgaggtgcacatgaacacgtgtcagatttttatgtgggtgtcaatggatgtattgccacctaaggatatt 16327916  T
Q  112 tatgtatcat 121  Q
    ||| ||||||    
T  16327915 tatctatcat 16327906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 63 - 122
Target Start/End: Complemental strand, 10356698 - 10356638
Alignment:
Q  63 tcagatttttgtgtgggtgtcaatagg-tgtattgccacctaagggtgtttatgtatcata 122  Q
    |||||||||||||||||||||||| || ||||||||||||||||| ||| |||||||||||    
T  10356698 tcagatttttgtgtgggtgtcaatgggatgtattgccacctaaggatgtctatgtatcata 10356638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 6259987 - 6260101
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||| ||| |||||||||||||| ||| || | ||||||| || |||  ||| ||||||||| |||||||| ||  ||||||||| |||||| || |||     
T  6259987 agaggagatgaaagagaaagtgtgcttctgtgaggtccatgtgaccatgtgttagatttttgcgtgggtgttaaagggtgtattgtcacctatggttgtg 6260086  T
Q  112 tatgtatcataactc 126  Q
    |||||||||| ||||    
T  6260087 tatgtatcattactc 6260101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 33825310 - 33825424
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    ||||||||  ||||||||||||| ||||||   ||| || |||  ||| |||||||||||| ||||||||||||   |||||||||||||||||  |||     
T  33825310 agagaagataaaagagaaagtgtgcttgtgtaaggttcacatgaacacgtgtcagatttttatgtgggtgtcaaggagtgtattgccacctaagaatgtc 33825409  T
Q  112 tatgtatcataactc 126  Q
    |||| ||||| ||||    
T  33825410 tatgcatcattactc 33825424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 21370109 - 21370048
Alignment:
Q  21 gaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgt 82  Q
    |||||||||| |||  ||||||||||||||  || |||||||||||||||||| ||||||||    
T  21370109 gaaagagaaaatgtgtttgtgcggggtccacgtgaccacatgtcagatttttgagtgggtgt 21370048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 39557513 - 39557594
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccaccta 103  Q
    |||||||||||||  ||||  ||||||||| ||  ||| |||||||||||||||||| ||| || ||||||||| |||||||    
T  39557513 aaagagaaagtgtgattgtatggggtccatgtgatcacgtgtcagatttttgtgtggatgttaagaggtgtattaccaccta 39557594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 129
Target Start/End: Complemental strand, 38296268 - 38296200
Alignment:
Q  61 tgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcataactcttt 129  Q
    |||| ||||||||||||||| | || |||||||||| ||||||||   || ||||||||||||||||||    
T  38296268 tgtctgatttttgtgtgggtattaagaggtgtattgacacctaagatagtctatgtatcataactcttt 38296200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 32473371 - 32473328
Alignment:
Q  56 ccacatgtcagatttttgtgtgggtgtcaataggtgtattgccac 100  Q
    |||||||||||| |||||||||||||| || ||||||||||||||    
T  32473371 ccacatgtcagaattttgtgtgggtgt-aagaggtgtattgccac 32473328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 103; Significance: 4e-51; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 19670702 - 19670820
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||  ||||||||||||||||||||||||    
T  19670702 agagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaagggtgtt 19670801  T
Q  112 tatgtatcataactctttt 130  Q
    |||||||||||||||||||    
T  19670802 tatgtatcataactctttt 19670820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 12 - 128
Target Start/End: Complemental strand, 55475305 - 55475189
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    ||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||    
T  55475305 agagaagaagaaagagaaagtgtacttatgcagggtccatatggccacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtt 55475206  T
Q  112 tatgtatcataactctt 128  Q
    |||||||||||||||||    
T  55475205 tatgtatcataactctt 55475189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 32767071 - 32766956
Alignment:
Q  13 gagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgttt 112  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||  |||||||||||||||||| ||||||    
T  32767071 gagaagaagaaagagaaagtgtacttgtgcagggtccatatggccacatgtcagatttttgtatgggtgtcaaggggtgtattgccacctaagagtgttt 32766972  T
Q  113 atgtatcataactctt 128  Q
    ||||||||||||||||    
T  32766971 atgtatcataactctt 32766956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 47986322 - 47986207
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||    
T  47986322 agagaataagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtggatgtcaagggatgtattgccacctaagggtgtt 47986223  T
Q  112 tatgtatcataactct 127  Q
    ||||||||||||||||    
T  47986222 tatgtatcataactct 47986207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 50813878 - 50813993
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||  |||||||| ||||||||| |||||    
T  50813878 agagaagaagaaagagaaagtgtacttgtgcggggttcatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattaccacctaagagtgtt 50813977  T
Q  112 tatgtatcataactct 127  Q
    ||||||||||||||||    
T  50813978 tatgtatcataactct 50813993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 55079699 - 55079814
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcgggg-tccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgt 110  Q
    |||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  55079699 agagaagaagaaagagaaagtgtacttgtgtgggggtccatatggccacatgtcagatttttgtatgggtgtcaagaggtgtattgccacctaagggtgt 55079798  T
Q  111 ttatgtatcataactc 126  Q
    ||||||||||||||||    
T  55079799 ttatgtatcataactc 55079814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 12 - 108
Target Start/End: Original strand, 17983729 - 17983825
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggt 108  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  17983729 agagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggt 17983825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 12 - 128
Target Start/End: Original strand, 29547945 - 29548061
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    ||||||||||||||| ||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||  | ||||||||||||||||| ||||    
T  29547945 agagaagaagaaagaaaaagtgtacttatgcgggatccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgccacctaaggatgtt 29548044  T
Q  112 tatgtatcataactctt 128  Q
    |||||||||||||||||    
T  29548045 tatgtatcataactctt 29548061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 8343149 - 8343263
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    ||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||| ||| ||||||||  | ||||||||||||||||| ||||    
T  8343149 agagaagaagaaagagaaagtatacttatgcggggtccatatggccacatgtcagatttttatgtaggtgtcaaaggatgtattgccacctaaggatgtt 8343248  T
Q  112 tatgtatcataactc 126  Q
    |||||||||||||||    
T  8343249 tatgtatcataactc 8343263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 44536732 - 44536846
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    ||||||||||||||||||||||||||| || |||||| ||||| ||||||||||||||||||||||| ||||||  |||||||||||||||||  |||||    
T  44536732 agagaagaagaaagagaaagtgtacttatgtggggtctatatgaccacatgtcagatttttgtgtggatgtcaa-gggtgtattgccacctaaaagtgtt 44536830  T
Q  112 tatgtatcataactct 127  Q
    ||||||||||||||||    
T  44536831 tatgtatcataactct 44536846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 18924481 - 18924595
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    ||||||||||||||||||||||||||||||||| || |||||  ||||||||||||||||||||||| | ||||  ||||||||||||||||||||| ||    
T  18924481 agagaagaagaaagagaaagtgtacttgtgcggagttcatattgccacatgtcagatttttgtgtggatatcaaggggtgtattgccacctaagggtatt 18924580  T
Q  112 tatgtatcataactc 126  Q
    |||| ||||||||||    
T  18924581 tatggatcataactc 18924595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 29589726 - 29589831
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||  ||||||||| || |||||||||||    
T  29589726 agagaagaagaaagagaaagtgtacttgtgtggggtccatatggccacatatcagatttttgtgtgggtgtcaaggggtgtattg-caactaagggtgtt 29589824  T
Q  112 tatgtat 118  Q
    |||||||    
T  29589825 tatgtat 29589831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 50052414 - 50052533
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||| ||| |||||||||||||| |||||||||||||||  || | || |||||||||||||||||||||||||  ||||||||||||||||||| |||     
T  50052414 agaggagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtc 50052513  T
Q  112 tatgtatcataactcttttt 131  Q
    |||||||||| |||||||||    
T  50052514 tatgtatcattactcttttt 50052533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 6034148 - 6034044
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||| ||||  || | ||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||    
T  6034148 aaagagaaagtgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 6034049  T
Q  122 aactc 126  Q
     ||||    
T  6034048 tactc 6034044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 41236451 - 41236347
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||||||||  || | || |||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||    
T  41236451 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgccacctaagggtgtctatgtatcat 41236352  T
Q  122 aactc 126  Q
     ||||    
T  41236351 tactc 41236347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 11511448 - 11511562
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    ||||||||  ||||||||||||| |||||||||||||||  || | || |||||||||||| ||||||||||||  |||||||||||||||||||||||     
T  11511448 agagaagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagggtgtc 11511547  T
Q  112 tatgtatcataactc 126  Q
    |||||||||| ||||    
T  11511548 tatgtatcattactc 11511562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 48183045 - 48183151
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||||||||  || | || |||||||||||||||||||||||||  ||||||||||||| ||||||||| ||||||||||    
T  48183045 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacgtaagggtgtctatgtatcat 48183144  T
Q  122 aactctt 128  Q
     ||||||    
T  48183145 tactctt 48183151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 480443 - 480552
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| ||||| |||||||||  || | || |||||||||||||||||||||||||  ||||||||| ||||||||||||| ||||||||||    
T  480443 aaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcat 480542  T
Q  122 aactcttttt 131  Q
     |||||||||    
T  480543 tactcttttt 480552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 12 - 128
Target Start/End: Complemental strand, 29977999 - 29977883
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||||||| |||||||||||||| |||||| |||||||||||| | || |||||||||||||||||||||| ||  |||||||||||||||| || | |     
T  29977999 agagaagatgaaagagaaagtgtgcttgtgtggggtccatatgactacgtgtcagatttttgtgtgggtgttaaggggtgtattgccacctatggttctg 29977900  T
Q  112 tatgtatcataactctt 128  Q
    |||||||||| ||||||    
T  29977899 tatgtatcattactctt 29977883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 12 - 129
Target Start/End: Complemental strand, 29240000 - 29239883
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||| ||| |||||||||||||| |||||| ||||||||  || | || ||| |||||||||||||| ||||||  |||||||||||||||||||||||     
T  29240000 agaggagaggaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtc 29239901  T
Q  112 tatgtatcataactcttt 129  Q
    |||||||||| |||||||    
T  29239900 tatgtatcattactcttt 29239883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 42044363 - 42044472
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||||||||  || | || ||||||||||||||||||||||  |  | ||||||||||||||||||||| ||||||||||    
T  42044363 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtacaaggatgtattgccacctaagggtgtctatgtatcat 42044462  T
Q  122 aactcttttt 131  Q
     |||||||||    
T  42044463 tactcttttt 42044472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 31910296 - 31910192
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||||||||| || | |  |||||||||||||||||||||||||   |||||||| ||||||||| ||| ||||||||||    
T  31910296 aaagagaaagtgtgcttgtgcggggtccatgtggctatgtgtcagatttttgtgtgggtgtcaaagagtgtattgtcacctaaggatgtctatgtatcat 31910197  T
Q  122 aactc 126  Q
    |||||    
T  31910196 aactc 31910192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 54473529 - 54473633
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||| ||||||| |||||||||||||||  || | || ||| |||||||||||||||||||||  ||||||||| ||||||||||||| ||||||||||    
T  54473529 aaagataaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaatggtgtattgtcacctaagggtgtctatgtatcat 54473628  T
Q  122 aactc 126  Q
     ||||    
T  54473629 tactc 54473633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 21 - 126
Target Start/End: Complemental strand, 3481759 - 3481654
Alignment:
Q  21 gaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatca 120  Q
    |||||||||||||| |||||| ||||||||  || | |  |||||||||||||||||||||||||   |||||||||||||||| ||||| |||||||||    
T  3481759 gaaagagaaagtgtgcttgtgtggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaaggtgtctatgtatca 3481660  T
Q  121 taactc 126  Q
    | ||||    
T  3481659 ttactc 3481654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 127
Target Start/End: Original strand, 29234241 - 29234346
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||||||||  || | || |||||||||||||||  ||| ||||  |||||||||||| |||||||||| ||||||||||    
T  29234241 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgaaggtatcaaagggtgtattgccatctaagggtgtctatgtatcat 29234340  T
Q  122 aactct 127  Q
     |||||    
T  29234341 tactct 29234346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 40574883 - 40574779
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| ||||| |||| ||||| |  |  | |||||||||||||||||||||||||  |||||||| |||||||||| ||| ||||||||||    
T  40574883 aaagagaaagtgtgcttgttcgggatccatgtagcagcgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcat 40574784  T
Q  122 aactc 126  Q
    |||||    
T  40574783 aactc 40574779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 12 - 128
Target Start/End: Original strand, 48647712 - 48647828
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||| ||| |||||||||| ||| ||||||||| |||||  || |||| ||| |||||||| ||||||||| || ||||||||||  |||||||| ||||    
T  48647712 agaggagaggaaagagaaattgtgcttgtgcggagtccacgtgaccacgtgttagatttttatgtgggtgttaagaggtgtattgttacctaaggatgtt 48647811  T
Q  112 tatgtatcataactctt 128  Q
    ||||| |||||||||||    
T  48647812 tatgtgtcataactctt 48647828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 28480254 - 28480369
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||| ||| ||| ||||||||||  ||||| |||||||| ||| | |||||||||||||||||||| |||| || | |||||||| ||||||||| |||     
T  28480254 agaggagatgaaggagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtc 28480353  T
Q  112 tatgtatcataactct 127  Q
    ||||||| ||||||||    
T  28480354 tatgtattataactct 28480369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 28481129 - 28481244
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||| ||| ||| ||||||||||  ||||| |||||||| ||| | |||||||||||||||||||| |||| || | |||||||| ||||||||| |||     
T  28481129 agaggagatgaaggagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtc 28481228  T
Q  112 tatgtatcataactct 127  Q
    ||||||| ||||||||    
T  28481229 tatgtattataactct 28481244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 28482004 - 28482119
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||| ||| ||| ||||||||||  ||||| |||||||| ||| | |||||||||||||||||||| |||| || | |||||||| ||||||||| |||     
T  28482004 agaggagatgaaggagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtc 28482103  T
Q  112 tatgtatcataactct 127  Q
    ||||||| ||||||||    
T  28482104 tatgtattataactct 28482119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 50526157 - 50526271
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||| ||| |||| |||||| || |||||||||  ||||  || |||| |||||||||||||||||||||||||  ||||||||||||||||| | |||     
T  50526157 agaggagaggaaatagaaagcgtgcttgtgcggaatccacgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtc 50526256  T
Q  112 tatgtatcataactc 126  Q
    |||||||||| ||||    
T  50526257 tatgtatcattactc 50526271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 23608339 - 23608233
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||| || || ||  || | || |||||||||||||||||||||||||  ||||||||| || |||||||||| ||| ||||||    
T  23608339 aaagagaaagtgtgcttgtgtggagttcacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgtcatctaagggtgtctatatatcat 23608240  T
Q  122 aactctt 128  Q
     ||||||    
T  23608239 tactctt 23608233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 24995103 - 24995209
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||| ||| |||||||||||||||  || | || ||||| |||||| ||||||||||||  |||||||||||| ||||||||||  || ||||||    
T  24995103 aaagagaaaatgtgcttgtgcggggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgccatctaagggtgtccatatatcat 24995202  T
Q  122 aactctt 128  Q
     ||||||    
T  24995203 tactctt 24995209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 41823986 - 41823926
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgt 82  Q
    ||||||||||||| |||||||||||||||| || | || ||||||||||||||||||||||    
T  41823986 aaagagaaagtgtgcttgtgcggggtccatgtgactacgtgtcagatttttgtgtgggtgt 41823926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 56300151 - 56300224
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaa 85  Q
    |||| ||| ||||||||||||||  |||||| || | |||||| ||||||||||||||||||||||| ||||||    
T  56300151 agaggagaggaaagagaaagtgtgtttgtgcaggattcatatgaccacatgtcagatttttgtgtggatgtcaa 56300224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 122
Target Start/End: Complemental strand, 18769214 - 18769113
Alignment:
Q  21 gaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatca 120  Q
    |||||||||| |||| ||||| |||||  | ||| |||| |||||||||||||||||||||| |   ||||||| |  || ||||| |||||||||||||    
T  18769214 gaaagagaaaatgtatttgtgtggggtttacatgaccacgtgtcagatttttgtgtgggtgttagagggtgtatgggtacataaggatgtttatgtatca 18769115  T
Q  121 ta 122  Q
    ||    
T  18769114 ta 18769113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 122
Target Start/End: Original strand, 53352562 - 53352661
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||| | |||||||||||||||  |  | || |||||||||||||||| ||||| ||    ||||||| ||||||||||||| ||||||||||    
T  53352562 aaagagaaagtatgcttgtgcggggtccacttaactacgtgtcagatttttgtgtaggtgttaaagaatgtattg-cacctaagggtgtctatgtatcat 53352660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 47104658 - 47104586
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtca 84  Q
    |||| ||| ||||||||||||||  ||||| |||||| |||   |||| ||||| ||||||||||||||||||    
T  47104658 agaggagatgaaagagaaagtgtgtttgtgtggggtcaataaaaccacgtgtcaaatttttgtgtgggtgtca 47104586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 2e-49; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 22343475 - 22343360
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  22343475 agagaagaagaaagagaaagtgtacttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtt 22343376  T
Q  112 tatgtatcataactct 127  Q
    ||||||||||||||||    
T  22343375 tatgtatcataactct 22343360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 41915855 - 41915740
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||    
T  41915855 agagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtaggtgtcaaggggtgtattgccacctaagggtgtt 41915756  T
Q  112 tatgtatcataactct 127  Q
    ||||||||||||||||    
T  41915755 tatgtatcataactct 41915740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 12 - 128
Target Start/End: Complemental strand, 38044311 - 38044195
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||  ||||||||||||||||||||||||    
T  38044311 agagaagaagaaagagaaagtgtacttgtgcggggtccatatggctacatgtcagatttttgtgtggatgtcaaggggtgtattgccacctaagggtgtt 38044212  T
Q  112 tatgtatcataactctt 128  Q
    |||||||||||||||||    
T  38044211 tatgtatcataactctt 38044195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 12 - 134
Target Start/End: Complemental strand, 7728020 - 7727898
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||  |||||| ||||||||| |||||||||||||||    
T  7728020 agagaagaagaaacagaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttatgtgaatgtcaagaggtgtattaccacctaagggtgtt 7727921  T
Q  112 tatgtatcataactctttttgtt 134  Q
    |||||||||||||||||||||||    
T  7727920 tatgtatcataactctttttgtt 7727898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 8238327 - 8238207
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccaccta-agggtgt 110  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||  |||||||||||||||| |||||||    
T  8238327 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctacagggtgt 8238228  T
Q  111 ttatgtatcataactcttttt 131  Q
    |||||||||||||||| ||||    
T  8238227 ttatgtatcataactcatttt 8238207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 32564412 - 32564526
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||  ||||||||||||||||||  ||||    
T  32564412 agagaagaagaaagagaaagtgtatttgtgcggggtccatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagaatgtt 32564511  T
Q  112 tatgtatcataactc 126  Q
    |||||||||||||||    
T  32564512 tatgtatcataactc 32564526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 40846099 - 40846213
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||||||||||||||||||||||| |||||||||||||||||  | |||||| |||||||||||||| ||||||  ||||||||||||||||||| ||||    
T  40846099 agagaagaagaaagagaaagtgtatttgtgcggggtccatataactacatgttagatttttgtgtggatgtcaaggggtgtattgccacctaaggatgtt 40846198  T
Q  112 tatgtatcataactc 126  Q
    |||||||||||||||    
T  40846199 tatgtatcataactc 40846213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 35522980 - 35522877
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||| |||||||| |||| |||||||||||||||||||||| ||  ||||||||||||| ||||| ||| ||||||||||    
T  35522980 aaagagaaagtgtgcttgtgcgggatccatatggccacgtgtcagatttttgtgtgggtgttaaatggtgtattgccacttaaggatgtctatgtatcat 35522881  T
Q  122 aact 125  Q
    ||||    
T  35522880 aact 35522877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 7389493 - 7389387
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||||||||  || | || |||||||||||||||||||||||||   |||||||||||||||||||||| ||||||||||    
T  7389493 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcat 7389394  T
Q  122 aactctt 128  Q
     ||||||    
T  7389393 tactctt 7389387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 19329946 - 19329842
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||||||||  ||   || ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||    
T  19329946 aaagagaaagtgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcat 19329847  T
Q  122 aactc 126  Q
     ||||    
T  19329846 tactc 19329842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 12 - 128
Target Start/End: Complemental strand, 36208287 - 36208171
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||| ||| |||||||||| ||| ||||||| |||||||  || ||||||||||| |||||||||||||||||||   |||||| ||||||||||||||     
T  36208287 agaggagaggaaagagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagctttttgtgtgggtgtcaatgaatgtattaccacctaagggtgtc 36208188  T
Q  112 tatgtatcataactctt 128  Q
    |||||||||||||||||    
T  36208187 tatgtatcataactctt 36208171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 22 - 121
Target Start/End: Complemental strand, 3784099 - 3784000
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||| ||||  || | || ||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||    
T  3784099 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcat 3784000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 8080379 - 8080485
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||||||||  || | || |||||||||||| ||| ||||||||  ||||||||||||||||||||||| ||||||||||    
T  8080379 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 8080478  T
Q  122 aactctt 128  Q
     ||||||    
T  8080479 tactctt 8080485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 18207293 - 18207176
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||| ||| |||||||||||||| |||||| ||||| ||  || |||| ||| |||||||||| |||||||||| |||||||||||||||||||| |||     
T  18207293 agaggagatgaaagagaaagtgtgcttgtgtggggttcacgtg-ccacgtgttagatttttgtatgggtgtcaagaggtgtattgccacctaaggttgtc 18207195  T
Q  112 tatgtatcataactctttt 130  Q
    |||||||||||||||||||    
T  18207194 tatgtatcataactctttt 18207176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 22 - 127
Target Start/End: Original strand, 36361909 - 36362014
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||| ||||||||  || | || |||||||||||||||||||||||||  | ||||||||||||||||||||| ||||||||||    
T  36361909 aaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagggtgtctatgtatcat 36362008  T
Q  122 aactct 127  Q
     |||||    
T  36362009 tactct 36362014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 4999510 - 4999614
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    |||||||||||||  ||||||||||||||  || | || | ||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||    
T  4999510 aaagagaaagtgtgtttgtgcggggtccacgtgactacgtatcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcat 4999609  T
Q  122 aactc 126  Q
     ||||    
T  4999610 tactc 4999614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 128
Target Start/End: Original strand, 19436173 - 19436289
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    ||||||||  ||||||||||||| ||| |||||| ||||  || | || ||||||||||||||||||||||||| |||||||||| ||||||||| |||     
T  19436173 agagaagagaaaagagaaagtgtgcttatgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaaggatgtc 19436272  T
Q  112 tatgtatcataactctt 128  Q
    |||||||||| ||||||    
T  19436273 tatgtatcattactctt 19436289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 38267144 - 38267040
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||||||||  || | || |||||||||||||||||||||||||  ||||||||| ||| ||||||||| ||||||||||    
T  38267144 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacataagggtgtctatgtatcat 38267045  T
Q  122 aactc 126  Q
     ||||    
T  38267044 tactc 38267040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 22 - 130
Target Start/End: Complemental strand, 38837321 - 38837213
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||||||||  || | || |||||||||||||||| |||||  |  ||||||||||||||||||||||| ||||||||||    
T  38837321 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtaggtgtacaagggtgtattgccacctaagggtgtctatgtatcat 38837222  T
Q  122 aactctttt 130  Q
     ||||||||    
T  38837221 tactctttt 38837213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 22 - 121
Target Start/End: Complemental strand, 3694471 - 3694372
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||| |||| ||| | || |||||||||||||||||||||| || |||||||||| ||||||||||||| ||| ||||||    
T  3694471 aaagagaaagtgtgcttgtgcgggatccacatgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgtcacctaagggtgtgtatatatcat 3694372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 46374812 - 46374902
Alignment:
Q  36 cttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcataactc 126  Q
    |||||||||||||||| || |||| |||||||||||||||||||||| ||  ||||| ||||||||||||| ||| |||||||||||||||    
T  46374812 cttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtgttgccacctaaggatgtctatgtatcataactc 46374902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 22 - 127
Target Start/End: Complemental strand, 3434666 - 3434561
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||| ||||  || | || |||||| ||||||||||||||||||  ||||||||||||||||||| ||| ||||||||||    
T  3434666 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagttttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcat 3434567  T
Q  122 aactct 127  Q
     |||||    
T  3434566 tactct 3434561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 35137637 - 35137528
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    |||||||||||||  ||||||||||||||  || | || ||| |||||||||||||||||||||  ||||||||||||||||||||||| ||| ||||||    
T  35137637 aaagagaaagtgtgtttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatttatcat 35137538  T
Q  122 aactcttttt 131  Q
     |||| ||||    
T  35137537 tactcatttt 35137528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 22 - 127
Target Start/End: Complemental strand, 36362130 - 36362025
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||| ||||||||  || | || |||||||||||||||||||||||||  | |||||| |||||||||||||| ||||||||||    
T  36362130 aaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattaccacctaagggtgtctatgtatcat 36362031  T
Q  122 aactct 127  Q
     |||||    
T  36362030 tactct 36362025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 39255910 - 39256023
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||| ||| |||||||||||||| |||||| || |||||  || |||| |||||||||||||| ||||| ||||  ||||||||||||||||||| |||     
T  39255910 agaggagatgaaagagaaagtgttcttgtgtggagtccacgtg-ccacgtgtcagatttttgtatgggtatcaagtggtgtattgccacctaaggttgtc 39256008  T
Q  112 tatgtatcataactc 126  Q
    |||||||||||||||    
T  39256009 tatgtatcataactc 39256023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 61 - 129
Target Start/End: Original strand, 10343598 - 10343666
Alignment:
Q  61 tgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcataactcttt 129  Q
    ||||||||||||||||||||||||| | ||||||| |||||||||||||| |||||||||| |||||||    
T  10343598 tgtcagatttttgtgtgggtgtcaagatgtgtatttccacctaagggtgtctatgtatcattactcttt 10343666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 21234504 - 21234401
Alignment:
Q  23 aagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcata 122  Q
    |||||||| ||| |||||||||||| ||| || | || ||||| ||||||||||| |||||||  ||||||||| ||||||||| ||| |||||||||||    
T  21234504 aagagaaaatgtgcttgtgcggggtacatgtggctacgtgtcaaatttttgtgtgagtgtcaaagggtgtattgtcacctaaggatgtctatgtatcata 21234405  T
Q  123 actc 126  Q
    ||||    
T  21234404 actc 21234401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 40957811 - 40957704
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| ||||| |||| ||||  || | || |||||||||||||||||||| ||||   ||||||||||||||||| |||| ||||||||||    
T  40957811 aaagagaaagtgtgcttgtacgggatccacgtgactacgtgtcagatttttgtgtgggtatcaaagagtgtattgccacctaagagtgtctatgtatcat 40957712  T
Q  122 aactcttt 129  Q
     |||||||    
T  40957711 tactcttt 40957704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 131
Target Start/End: Original strand, 35468850 - 35468960
Alignment:
Q  21 gaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatca 120  Q
    ||||||||||||||  |||||| ||||||| |||  ||||| | |||||||| ||||||||||||  | |||||||||| |||||| ||| |||||||||    
T  35468850 gaaagagaaagtgtgtttgtgcagggtccacatggtcacatattagatttttatgtgggtgtcaaatgatgtattgccatctaaggatgtctatgtatca 35468949  T
Q  121 taactcttttt 131  Q
    | |||||||||    
T  35468950 ttactcttttt 35468960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 127
Target Start/End: Complemental strand, 26296748 - 26296643
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||| ||  ||||||||||||||||||| |||| | |||||||||| ||||| ||| ||  ||| ||||| ||||||||| ||| ||||||||||    
T  26296748 aaagagaaaatgcgcttgtgcggggtccatatggccacgtatcagatttttatgtggatgttaaagggtatattgtcacctaaggatgtctatgtatcat 26296649  T
Q  122 aactct 127  Q
    ||||||    
T  26296648 aactct 26296643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 2318238 - 2318338
Alignment:
Q  21 gaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatca 120  Q
    |||||||||||| | ||| ||  |||||||  || ||||| |||||||||||||||||||||||| |||||| |||||||||| || |||| ||||||||    
T  2318238 gaaagagaaagtatgcttatgtcgggtccacgtgaccacacgtcagatttttgtgtgggtgtcaagaggtgtcttgccacctatggttgttaatgtatca 2318337  T
Q  121 t 121  Q
    |    
T  2318338 t 2318338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 22 - 127
Target Start/End: Original strand, 46033797 - 46033902
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||| | | ||||||||| || ||| || |||| |||||||||||| ||||||||| ||  ||||||||||||||||||  | | ||||||||||    
T  46033797 aaagagaaaatatgcttgtgcggagttcatgtgaccacgtgtcagatttttatgtgggtgttaaagggtgtattgccacctaagaatatctatgtatcat 46033896  T
Q  122 aactct 127  Q
    ||||||    
T  46033897 aactct 46033902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 41423752 - 41423682
Alignment:
Q  56 ccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcataactc 126  Q
    |||||||||||||||||||||  ||||||| ||||||||| ||| |||| | ||| |||||||||||||||    
T  41423752 ccacatgtcagatttttgtgtaagtgtcaagaggtgtattaccatctaatgatgtctatgtatcataactc 41423682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 121
Target Start/End: Original strand, 32951489 - 32951588
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||||||||  || | || ||| |||||||||||||| ||| ||  | ||||||| || ||||| |||| ||||||||||    
T  32951489 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtggatgttaaaggatgtattgtcatctaagagtgtctatgtatcat 32951588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 31735981 - 31735884
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||| ||||| || |||| |||       |||||||||||| ||   |||||||||||||||||| ||| ||||||||||    
T  31735981 aaagagaaagtgtgcttgtgcgggatccatgtggccacgtgt-------ttgtgtgggtgttaaagagtgtattgccacctaaggatgtctatgtatcat 31735889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 129
Target Start/End: Complemental strand, 11044283 - 11044185
Alignment:
Q  21 gaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatca 120  Q
    ||||||||||||||||||||||||||||||  || | || ||||||          |||||||||  | ||||||||||||||||||||| |||||||||    
T  11044283 gaaagagaaagtgtacttgtgcggggtccacgtgactacgtgtcag----------gggtgtcaaaggatgtattgccacctaagggtgtctatgtatca 11044194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 120
Target Start/End: Original strand, 43317566 - 43317629
Alignment:
Q  56 ccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatca 120  Q
    |||||||||||| |||||||||||||| ||  |||||||||||||  ||||||||  ||||||||    
T  43317566 ccacatgtcagaattttgtgtgggtgt-aaggggtgtattgccacacaagggtgtacatgtatca 43317629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 6e-47; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 45097721 - 45097840
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||  | ||||||||||||||||| ||||    
T  45097721 agagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtatgggtgtcaagggatgtattgccacctaaggatgtt 45097820  T
Q  112 tatgtatcataactcttttt 131  Q
    ||||||||||||||||||||    
T  45097821 tatgtatcataactcttttt 45097840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 43490235 - 43490121
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  43490235 agagaagaagaaagataaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgtcacctaagggtgtt 43490136  T
Q  112 tatgtatcataactc 126  Q
    |||||||||||||||    
T  43490135 tatgtatcataactc 43490121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 38732468 - 38732354
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  | ||||||| ||| ||||||||||    
T  38732468 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataagggtgtt 38732369  T
Q  112 tatgtatcataactc 126  Q
    |||||||||||||||    
T  38732368 tatgtatcataactc 38732354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 13365467 - 13365346
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagg--gtg 109  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||  ||| |||||||| ||||||  |||    
T  13365467 agagaagaagaaagagaaagtgtacttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtatattgccatctaagggtgtg 13365368  T
Q  110 tttatgtatcataactcttttt 131  Q
    ||||||||||||||||||||||    
T  13365367 tttatgtatcataactcttttt 13365346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 12 - 108
Target Start/End: Original strand, 2997473 - 2997569
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggt 108  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  2997473 agagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggt 2997569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 40613898 - 40614002
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||||||||| || |||| |||||||||||||||||||||||||  ||||||||||||||||||| ||| ||||||||||    
T  40613898 aaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcat 40613997  T
Q  122 aactc 126  Q
    |||||    
T  40613998 aactc 40614002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 9058584 - 9058478
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| ||||||||||||||| ||| | || |||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||    
T  9058584 aaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 9058485  T
Q  122 aactctt 128  Q
     ||||||    
T  9058484 tactctt 9058478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 10249378 - 10249484
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||||||||  || | || ||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||    
T  10249378 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcat 10249477  T
Q  122 aactctt 128  Q
     ||||||    
T  10249478 tactctt 10249484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 12 - 129
Target Start/End: Original strand, 26891490 - 26891607
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||||||| |||||||||| ||| ||||| || ||||||  || |||||||||||||||||||||||||||| |  ||||||||||||||||||||||      
T  26891490 agagaagaggaaagagaaaatgtgcttgttcgaggtccacgtgaccacatgtcagatttttgtgtgggtgtctaggggtgtattgccacctaagggtggc 26891589  T
Q  112 tatgtatcataactcttt 129  Q
    ||||||||||||||||||    
T  26891590 tatgtatcataactcttt 26891607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 21 - 130
Target Start/End: Original strand, 33436095 - 33436204
Alignment:
Q  21 gaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatca 120  Q
    |||||||||||||| |||||||||||||||  || | || ||| |||||||||||||||||||||  ||||||||||||||||||||||| |||||||||    
T  33436095 gaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatca 33436194  T
Q  121 taactctttt 130  Q
    | ||||||||    
T  33436195 ttactctttt 33436204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 28381651 - 28381755
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| ||||||||| |||||| || | || ||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||    
T  28381651 aaagagaaagtgtgcttgtgcggagtccatgtgactacgtgtcagatttttgtgtgggtgtcgaaaggtgtattgccacctaagggtgtctatgtatcat 28381750  T
Q  122 aactc 126  Q
     ||||    
T  28381751 tactc 28381755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 22 - 130
Target Start/End: Complemental strand, 42257297 - 42257189
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||||||||| || |||| |||||||||||| ||||||||||||  | ||||||||||||||| | ||| ||||||||||    
T  42257297 aaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttttatgtgggtgtcaaatgatgtattgccacctaaagatgtctatgtatcat 42257198  T
Q  122 aactctttt 130  Q
    |||||||||    
T  42257197 aactctttt 42257189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 22 - 121
Target Start/End: Complemental strand, 28863559 - 28863460
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||||||||  || | || |||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||    
T  28863559 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 28863460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 26 - 127
Target Start/End: Original strand, 32505648 - 32505749
Alignment:
Q  26 agaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcataact 125  Q
    ||||||||| |||||||||||||||  || | || ||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||| |||    
T  32505648 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattact 32505747  T
Q  126 ct 127  Q
    ||    
T  32505748 ct 32505749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 40701582 - 40701478
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    |||||||||||||  ||||||||||||||  |  | || ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  40701582 aaagagaaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcat 40701483  T
Q  122 aactc 126  Q
     ||||    
T  40701482 tactc 40701478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 22 - 121
Target Start/End: Original strand, 19930816 - 19930915
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    |||||||||||||  |||||||||||||| ||| | || |||||||||||||||||| ||||||  ||||||||||||||||||||||| ||||||||||    
T  19930816 aaagagaaagtgtgtttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtatcat 19930915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 22 - 127
Target Start/End: Original strand, 7465731 - 7465836
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||| ||||||||  || | || |||||||||||||||||||||||||  |||||||||||| |||||||||| ||||||||||    
T  7465731 aaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcat 7465830  T
Q  122 aactct 127  Q
     |||||    
T  7465831 tactct 7465836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 3034969 - 3035033
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgt 76  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  3034969 agagaagaagaaagagaaagtatacttgtgcggggtccatatgaccacatgtcagatttttgtgt 3035033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 13438447 - 13438343
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||||||||  || | || |||||||||||||||||||||||||  | ||||||| ||||||||||||| ||||||||||    
T  13438447 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtcacctaagggtgtctatgtatcat 13438348  T
Q  122 aactc 126  Q
     ||||    
T  13438347 tactc 13438343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 17473124 - 17473020
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||| ||||  || | || |||||||||||||||||||||||||  |||||||||||| |||||||||| ||||||||||    
T  17473124 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcat 17473025  T
Q  122 aactc 126  Q
     ||||    
T  17473024 tactc 17473020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 22 - 130
Target Start/End: Original strand, 38273138 - 38273246
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| || ||||||||||||| || | || |||||||||||||||||||||| ||  |||||||||||| |||||  ||| ||||||||||    
T  38273138 aaagagaaagtgtgctagtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgttaaagggtgtattgccatctaagaatgtctatgtatcat 38273237  T
Q  122 aactctttt 130  Q
    |||||||||    
T  38273238 aactctttt 38273246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 22 - 133
Target Start/End: Complemental strand, 30915567 - 30915456
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| ||||| |||||||||  || | || |||||||||||| |||||| |||||  ||||||||||||||||||||||| ||||||||||    
T  30915567 aaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttatgtgggggtcaaagggtgtattgccacctaagggtgtctatgtatcat 30915468  T
Q  122 aactctttttgt 133  Q
     |||||| ||||    
T  30915467 tactcttcttgt 30915456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 22 - 127
Target Start/End: Original strand, 5574484 - 5574589
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||| ||||  || | || |||||||||||| ||||||||||||  |||||||||||||||||| |||| ||||||||||    
T  5574484 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcat 5574583  T
Q  122 aactct 127  Q
     |||||    
T  5574584 tactct 5574589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 17819990 - 17820104
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||| ||| |||||||||| |||  ||||| ||||||||  |  ||||||||||||||||||||||||||||||  ||||||||||||||||  | |||     
T  17819990 agaggagatgaaagagaaaatgtgtttgtgtggggtccacgtaaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctatagttgtc 17820089  T
Q  112 tatgtatcataactc 126  Q
    |||||||||||||||    
T  17820090 tatgtatcataactc 17820104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 20700929 - 20700811
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||| ||| |||||||||||||| ||| |||||||||||  || | || |||||||||||||||| || |||||  ||||||||||||| ||||| |||     
T  20700929 agaggagaggaaagagaaagtgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtaggagtcaaagggtgtattgccacataaggatgtc 20700830  T
Q  112 tatgtatcataactctttt 130  Q
    |||||||||| ||||||||    
T  20700829 tatgtatcattactctttt 20700811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 27864810 - 27864704
Alignment:
Q  20 agaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatc 119  Q
    ||||||||||||||| ||| |||||||||||  ||   || |||||||||||||||||| ||||||  ||||||||||||| ||||||||| ||||||||    
T  27864810 agaaagagaaagtgtgcttttgcggggtccacgtgattacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacataagggtgtctatgtatc 27864711  T
Q  120 ataactc 126  Q
    || ||||    
T  27864710 attactc 27864704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 21 - 127
Target Start/End: Complemental strand, 33436316 - 33436210
Alignment:
Q  21 gaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatca 120  Q
    |||||||||||||| |||||||   ||||| |||  ||| |||||||||||| |||||||||||| ||||||||||||| |||||| ||| |||||||||    
T  33436316 gaaagagaaagtgtgcttgtgcaaagtccacatggtcacgtgtcagatttttatgtgggtgtcaaaaggtgtattgccatctaaggatgtctatgtatca 33436217  T
Q  121 taactct 127  Q
    | |||||    
T  33436216 ttactct 33436210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 127
Target Start/End: Complemental strand, 2533227 - 2533123
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||| ||||||| ||||||||||||| || || | || |||||||||||||||| ||||||||  | ||||||||||| ||||| ||| ||||||||||    
T  2533227 aaagaaaaagtgtgcttgtgcggggtctatgtggctacgtgtcagatttttgtgt-ggtgtcaaaggatgtattgccacttaaggatgtctatgtatcat 2533129  T
Q  122 aactct 127  Q
    ||||||    
T  2533128 aactct 2533123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 4060750 - 4060685
Alignment:
Q  61 tgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcataactc 126  Q
    |||||||||||||||||| |||||| |||||||||| ||||||||||||| |||||||||| ||||    
T  4060750 tgtcagatttttgtgtggatgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactc 4060685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 127
Target Start/End: Complemental strand, 36168940 - 36168835
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||| | |||||||||||||||| || |||| ||||| ||||||||||||| || ||  | ||||||| || |||||| ||| ||||||||||    
T  36168940 aaagagaaagtatgcttgtgcggggtccatgtggccacgtgtcaaatttttgtgtgggagttaaaggatgtattgtcatctaaggatgtctatgtatcat 36168841  T
Q  122 aactct 127  Q
    ||||||    
T  36168840 aactct 36168835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 12 - 120
Target Start/End: Complemental strand, 3440093 - 3439985
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||| ||| |||||||||| ||| |||||||||||||||  |   ||||||| ||||||||||||||||||| |   ||||||||||||||||||||||     
T  3440093 agaggagaggaaagagaaaatgtgcttgtgcggggtccacgtaatcacatgttagatttttgtgtgggtgtccaggagtgtattgccacctaagggtgtc 3439994  T
Q  112 tatgtatca 120  Q
    || ||||||    
T  3439993 tacgtatca 3439985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 15428770 - 15428842
Alignment:
Q  56 ccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcataactctt 128  Q
    |||||||||||||||||||||| |||| ||  ||||||| ||||| ||||| |||||||||||||||||||||    
T  15428770 ccacatgtcagatttttgtgtgagtgttaaggggtgtatggccacataaggatgtttatgtatcataactctt 15428842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 12 - 83
Target Start/End: Complemental strand, 3738057 - 3737986
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtc 83  Q
    |||| ||| |||| ||||| ||| ||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  3738057 agaggagaggaaaaagaaaatgtgcttgtgcggggtccacatgaccacatgtcagatttttgtgtgggtgtc 3737986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 121
Target Start/End: Complemental strand, 41575252 - 41575142
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgc-ggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgt 110  Q
    |||| ||| |||||||||||||| ||||||  |||||||| ||| |||||||||| |||||||||||  ||||||  |||||||| ||| |||||| |||    
T  41575252 agaggagatgaaagagaaagtgtgcttgtgtaggggtccacatgaccacatgtcaaatttttgtgtgaatgtcaaagggtgtattaccatctaaggatgt 41575153  T
Q  111 ttatgtatcat 121  Q
     ||||||||||    
T  41575152 ctatgtatcat 41575142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 61 - 129
Target Start/End: Original strand, 38882849 - 38882916
Alignment:
Q  61 tgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcataactcttt 129  Q
    |||||||||||||||||| ||||||  ||| ||||||||||||||||||| |||||||||| |||||||    
T  38882849 tgtcagatttttgtgtggatgtcaaagggt-tattgccacctaagggtgtctatgtatcattactcttt 38882916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 1e-41; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 45058539 - 45058652
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    ||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||| ||||||||||||  ||||||||||||||||||||||||    
T  45058539 agagaagaagaaagagaaagtatacttgtgcggggtccatatggtcacatgtcagatttttatgtgggtgtcaa-gggtgtattgccacctaagggtgtt 45058637  T
Q  112 tatgtatcataactc 126  Q
    |||||||||||||||    
T  45058638 tatgtatcataactc 45058652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 36331315 - 36331407
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaa 104  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||| ||||||||||||    
T  36331315 agagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgcattgccacctaa 36331407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 123
Target Start/End: Complemental strand, 42823225 - 42823114
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||||| |||||||||||||| ||||| ||||||||||||||| |||||||||| |||||| ||||||||||||  |||||||| |||| ||| ||||||    
T  42823225 agagaataagaaagagaaagtatacttatgcggggtccatatgaccacatgtcaaatttttttgtgggtgtcaaggggtgtattaccacataatggtgtt 42823126  T
Q  112 tatgtatcataa 123  Q
    ||||||||||||    
T  42823125 tatgtatcataa 42823114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 26141528 - 26141632
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||| ||||||||| || |||| |||||||||||||||||||||| ||  ||||||||||||||||||| ||| ||||||||||    
T  26141528 aaagagaaagtgtgcttgtgtggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcat 26141627  T
Q  122 aactc 126  Q
    |||||    
T  26141628 aactc 26141632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 53982115 - 53982011
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||||||||  || | || |||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||    
T  53982115 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 53982016  T
Q  122 aactc 126  Q
     ||||    
T  53982015 tactc 53982011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 12 - 123
Target Start/End: Complemental strand, 26754809 - 26754698
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||| ||| |||||||||| ||| |||||||||||||||| || ||||||||||||||||||||||| |||| |  |||||||||||||||||||||||     
T  26754809 agaggagaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtccaagggtgtattgccacctaagggtgtc 26754710  T
Q  112 tatgtatcataa 123  Q
    |||| |||||||    
T  26754709 tatgaatcataa 26754698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 8076507 - 8076393
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||| ||| |||||||||||||| |||||||||||||||  || | || ||| |||||||||||||||||||||  |||||| |||||||||||||||||    
T  8076507 agaggagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagggtgtt 8076408  T
Q  112 tatgtatcataactc 126  Q
    |||||||||| ||||    
T  8076407 tatgtatcattactc 8076393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 11907475 - 11907369
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||| ||||  |   |||||||| ||||||||||||| ||||||||||    
T  11907475 aaagagaaaatgtgcttgtgcggggtccatatgaccacatgtcagatttttgtgtgagtgttcaggtgtgtattgtcacctaagggtgtctatgtatcat 11907376  T
Q  122 aactctt 128  Q
    |||||||    
T  11907375 aactctt 11907369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 14623825 - 14623939
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||||||| |||||||||||||| |||||| | |||||| |||  |||||||||||||||| ||||||||||||  ||||||||||||||||||| |||     
T  14623825 agagaagatgaaagagaaagtgtgcttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtc 14623924  T
Q  112 tatgtatcataactc 126  Q
    |||||||||| ||||    
T  14623925 tatgtatcattactc 14623939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 31456793 - 31456679
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| ||||||||||||||| ||| | || |||||||||||||||||||||||||  ||||||||||| |||| |||||| ||||||||||    
T  31456793 aaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccgcctatgggtgtctatgtatcat 31456694  T
Q  122 aactctttttgtttt 136  Q
     ||| ||||| ||||    
T  31456693 tactttttttttttt 31456679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 41189760 - 41189866
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||||||||| || |||| ||||| |||||| ||||||||||||  | ||||||||||||||||| ||| ||||||||||    
T  41189760 aaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcaaatttttatgtgggtgtcaaatgatgtattgccacctaaggatgtatatgtatcat 41189859  T
Q  122 aactctt 128  Q
    |||||||    
T  41189860 aactctt 41189866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 54868891 - 54868997
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    |||||||||||||  ||||||||||||||  |  | || ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  54868891 aaagagaaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcat 54868990  T
Q  122 aactctt 128  Q
     ||||||    
T  54868991 tactctt 54868997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 23 - 128
Target Start/End: Original strand, 27714888 - 27714993
Alignment:
Q  23 aagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcata 122  Q
    |||||||||||| ||||||||||||||| ||| | || |||||||||||||||||||||||||  |||||||| |||||||| ||||| ||||||||||     
T  27714888 aagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaaggtgtctatgtatcatt 27714987  T
Q  123 actctt 128  Q
    ||||||    
T  27714988 actctt 27714993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 33644304 - 33644200
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||||||||  || | || |||||||||||||||||||||||||  |||||||||||||| |||||||| ||||||||||    
T  33644304 aaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacccaagggtgtctatgtatcat 33644205  T
Q  122 aactc 126  Q
     ||||    
T  33644204 tactc 33644200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 47531969 - 47531865
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||||||||| |||||| |||| ||||||||| |||||||| ||| || ||||||||||||| |||||| ||| ||||||||||    
T  47531969 aaagagaaagtgtgcttgtgcggggttcatatggccacgtgtcagattcttgtgtggatgttaaaaggtgtattgccatctaaggatgtctatgtatcat 47531870  T
Q  122 aactc 126  Q
    |||||    
T  47531869 aactc 47531865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 22 - 130
Target Start/End: Complemental strand, 49607518 - 49607410
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||| ||| ||||  || | || |||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||    
T  49607518 aaagagaaagtgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 49607419  T
Q  122 aactctttt 130  Q
     ||||||||    
T  49607418 tactctttt 49607410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 22 - 122
Target Start/End: Complemental strand, 52629404 - 52629304
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| ||||| |||||||||  || | || |||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||    
T  52629404 aaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 52629305  T
Q  122 a 122  Q
    |    
T  52629304 a 52629304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 12 - 121
Target Start/End: Original strand, 13898041 - 13898150
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||||||| |||||||||||||| |||||| | |||||| |||  ||| |||||||||||| ||||||||||||  ||||||||||||||||||| ||||    
T  13898041 agagaagatgaaagagaaagtgtgcttgtgtgaggtccacatgaacacgtgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtt 13898140  T
Q  112 tatgtatcat 121  Q
    ||| ||||||    
T  13898141 tatctatcat 13898150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 22 - 127
Target Start/End: Complemental strand, 17470509 - 17470404
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| |||||| ||||||||  || | || |||||||||||||||||||||| || |||||||||||||||||| ||||| ||||||||||    
T  17470509 aaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccacctaaaggtgtctatgtatcat 17470410  T
Q  122 aactct 127  Q
     |||||    
T  17470409 tactct 17470404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 22 - 130
Target Start/End: Original strand, 11347918 - 11348026
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| ||| ||| |||||||| || |||| |||||||||||||||||| ||||||  | ||||||| ||||||||| ||| ||||||||||    
T  11347918 aaagagaaagtgtgcttatgcagggtccatgtggccacgtgtcagatttttgtgtggatgtcaaaggatgtattgtcacctaaggatgtctatgtatcat 11348017  T
Q  122 aactctttt 130  Q
    |||||||||    
T  11348018 aactctttt 11348026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 20764911 - 20765015
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| ||||| |||||||||| || |||| |||||||||||||||||||||| ||   ||||||| |||||||||| ||| ||||| ||||    
T  20764911 aaagagaaagtgtgcttgtacggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaaggatgtctatgtctcat 20765010  T
Q  122 aactc 126  Q
    |||||    
T  20765011 aactc 20765015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 30801728 - 30801828
Alignment:
Q  21 gaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatca 120  Q
    |||||||||| ||| |||||| |||||||||||| | |||||||| |||||||||||||| ||||  ||||||||  ||||||||||||| |||||||||    
T  30801728 gaaagagaaaatgtgcttgtgtggggtccatatgactacatgtcatatttttgtgtgggtatcaaagggtgtattatcacctaagggtgtctatgtatca 30801827  T
Q  121 t 121  Q
    |    
T  30801828 t 30801828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 51419356 - 51419460
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| ||||||||||||| || || |||| |||||||||||||||||||||| ||  | ||||||| || |||||| ||| ||||||||||    
T  51419356 aaagagaaagtgtgcttgtgcggggtctatgtggccacgtgtcagatttttgtgtgggtgttaaaggatgtattgtcatctaaggatgtctatgtatcat 51419455  T
Q  122 aactc 126  Q
    |||||    
T  51419456 aactc 51419460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 61 - 128
Target Start/End: Original strand, 11095388 - 11095455
Alignment:
Q  61 tgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcataactctt 128  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||| ||||||    
T  11095388 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 11095455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 22 - 121
Target Start/End: Original strand, 48587087 - 48587186
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    |||||||||||||||||||||||| ||||  || | || |||||||||||| ||| ||||||||  ||||||||||||||||||||| | ||||||||||    
T  48587087 aaagagaaagtgtacttgtgcgggatccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtatctatgtatcat 48587186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 24699940 - 24700055
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||| ||| ||||||||||||||  |||| | |||||||  || |||| || ||||||||| |||||||||||| ||||||||||||| |||||| |||     
T  24699940 agaggagaggaaagagaaagtgtgtttgtacagggtccacgtggccacgtgccagatttttatgtgggtgtcaaaaggtgtattgccaactaaggatgtc 24700039  T
Q  112 tatgtatcataactct 127  Q
    |||||||||| |||||    
T  24700040 tatgtatcattactct 24700055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 25395319 - 25395434
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||||||| |||||||||| |||  ||||| |||||| ||||  ||||||||||||||||||||||||| | ||  | ||||| ||||| ||||| ||||    
T  25395319 agagaagatgaaagagaaaatgtgtttgtgtggggtctatatagccacatgtcagatttttgtgtgggtattaagggatgtatggccacataaggatgtt 25395418  T
Q  112 tatgtatcataactct 127  Q
    ||||||||||| ||||    
T  25395419 tatgtatcatagctct 25395434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 61 - 128
Target Start/End: Original strand, 33118886 - 33118953
Alignment:
Q  61 tgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcataactctt 128  Q
    ||||| |||||||||||||||||||  ||||||||| ||||||||||||| |||||||||||||||||    
T  33118886 tgtcaaatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcataactctt 33118953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 35536740 - 35536625
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||||||| ||||||| |||||| ||||||   |||||| ||| |||| ||||| |||||| ||||||||||||  ||||||||||||| ||||| |||     
T  35536740 agagaagatgaaagaggaagtgtgcttgtgtaaggtccacatgaccacgtgtcacatttttatgtgggtgtcaaatggtgtattgccacataaggatgtc 35536641  T
Q  112 tatgtatcataactct 127  Q
    |||||||||| |||||    
T  35536640 tatgtatcattactct 35536625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 56 - 127
Target Start/End: Original strand, 36331408 - 36331479
Alignment:
Q  56 ccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcataactct 127  Q
    ||||||| ||||||||||||||| ||||||  |||| ||||||| |||||||||||||||||||||||||||    
T  36331408 ccacatgccagatttttgtgtggatgtcaaggggtgcattgccatctaagggtgtttatgtatcataactct 36331479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 48375692 - 48375807
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||| ||| |||||||||| ||| |||||||||||||||| || ||||| ||||||||||||| ||| | |  |  ||||||||| |||||||||||||     
T  48375692 agaggagaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacacgtcagatttttgtatggattttcaggggtgtattgtcacctaagggtgtc 48375791  T
Q  112 tatgtatcataactct 127  Q
    |||| |||||||||||    
T  48375792 tatgaatcataactct 48375807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 61 - 129
Target Start/End: Original strand, 36707459 - 36707527
Alignment:
Q  61 tgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcataactcttt 129  Q
    |||||||||||||||||| ||||||  ||||||||| ||||||||||| | |||||||||| |||||||    
T  36707459 tgtcagatttttgtgtggatgtcaaagggtgtattgtcacctaagggtatctatgtatcattactcttt 36707527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 8956876 - 8956761
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||||||| ||||||| |||||| ||||||   |||||| |||  ||| ||||| |||||| ||||||||||||  | ||||||||||| ||||| |||     
T  8956876 agagaagatgaaagaggaagtgtgcttgtgtaaggtccacatgaacacgtgtcacatttttatgtgggtgtcaaaggatgtattgccacataaggatgtc 8956777  T
Q  112 tatgtatcataactct 127  Q
    |||||||||| |||||    
T  8956776 tatgtatcattactct 8956761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 12 - 121
Target Start/End: Original strand, 25407133 - 25407243
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagattttt-gtgtgggtgtcaataggtgtattgccacctaagggtgt 110  Q
    |||| ||| ||||||||||||||  ||||| ||| ||||||||  ||| |||||||||||| ||||| |||||||  ||| |||||||||||| || |||    
T  25407133 agaggagatgaaagagaaagtgtgtttgtgtgggatccatatgatcacgtgtcagattttttgtgtgtgtgtcaaggggtatattgccacctatggttgt 25407232  T
Q  111 ttatgtatcat 121  Q
     ||||||||||    
T  25407233 gtatgtatcat 25407243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 128
Target Start/End: Complemental strand, 35093688 - 35093583
Alignment:
Q  23 aagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcata 122  Q
    |||||||||||| |||||  || || || ||| |||||||||||||||||| |||| ||||||  | ||||||| ||||||| | ||| |||||||| ||    
T  35093688 aagagaaagtgtgcttgtatggagttcacatgaccacatgtcagatttttgcgtggatgtcaaatgttgtattgtcacctaaagttgtctatgtatcgta 35093589  T
Q  123 actctt 128  Q
    ||||||    
T  35093588 actctt 35093583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 41080821 - 41080709
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||| ||| |||||||||| ||| |||||| ||| |||| ||| |||||| ||||||||||| |||||||||||  ||||| |||| | |||||| |||     
T  41080821 agaggagatgaaagagaaaatgtgcttgtgtggg-tccacatgaccacatatcagatttttgcgtgggtgtcaaagggtgttttgcta-ctaaggatgtc 41080724  T
Q  112 tatgtatcataactc 126  Q
    |||||||||| ||||    
T  41080723 tatgtatcattactc 41080709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 60 - 128
Target Start/End: Original strand, 1758490 - 1758560
Alignment:
Q  60 atgtcagatttttgtgtgggtgtcaa--taggtgtattgccacctaagggtgtttatgtatcataactctt 128  Q
    ||||||||||||||||||||||||||    |||||||||| ||||| || ||  |||||||||||||||||    
T  1758490 atgtcagatttttgtgtgggtgtcaaggggggtgtattgcaacctatggttgactatgtatcataactctt 1758560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 4190242 - 4190170
Alignment:
Q  56 ccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcataactcttt 129  Q
    |||||||||||  |||||||||||||| || |||||||||||||| ||||||| |  ||||||||  |||||||    
T  4190242 ccacatgtcaggattttgtgtgggtgt-aagaggtgtattgccacataagggtatacatgtatcaccactcttt 4190170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 35965803 - 35965876
Alignment:
Q  55 tccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcataactctt 128  Q
    ||||| |||||||||||| ||||||||||||  | ||||||  ||| ||||| ||| |||||||||| ||||||    
T  35965803 tccacgtgtcagatttttatgtgggtgtcaaaggatgtattatcacttaaggatgtatatgtatcattactctt 35965876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 100
Target Start/End: Original strand, 9434247 - 9434290
Alignment:
Q  56 ccacatgtcagatttttgtgtgggtgtcaataggtgtattgccac 100  Q
    |||||||||||| |||||||||||||| || ||||||||||||||    
T  9434247 ccacatgtcagaattttgtgtgggtgt-aagaggtgtattgccac 9434290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 12 - 113
Target Start/End: Complemental strand, 152612 - 152511
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||  |||||||||||||| |||||||||    
T  152612 agagaagaagaaagagaaagtgtatttgtgcgggatccatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacccaagggtgtt 152513  T
Q  112 ta 113  Q
    ||    
T  152512 ta 152511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 10105 - 10214
Alignment:
Q  22 aaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatcat 121  Q
    ||||||||||||| ||||| || ||||||  || | || |||||||||||| ||||| ||||||  | ||||||||||||||| ||||| ||||||||||    
T  10105 aaagagaaagtgtgcttgtacgcggtccacgtgactacgtgtcagatttttatgtggatgtcaaaggatgtattgccacctaaaggtgtctatgtatcat 10204  T
Q  122 aactcttttt 131  Q
    ||||||||||    
T  10205 aactcttttt 10214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 17170 - 17097
Alignment:
Q  10 agagagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtc 83  Q
    |||||||||| |||||||||| ||| |||||||||||||||| || ||||||||||||||||||||||| ||||    
T  17170 agagagaagaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtc 17097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 4143 - 4029
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    ||||||||  ||||||||||||| ||| |||||| ||||  |  | || |||||||||||||||||||||| || ||||||||||||| |||| |||||     
T  4143 agagaagagaaaagagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtc 4044  T
Q  112 tatgtatcataactc 126  Q
    |||||||||| ||||    
T  4043 tatgtatcattactc 4029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 915 - 1029
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||| ||| |||||||||||||| |||||||||| | ||  || | || |||||| ||||||||||| ||| ||  ||||||||||||||||| | |||     
T  915 agaggagaggaaagagaaagtgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtc 1014  T
Q  112 tatgtatcataactc 126  Q
    |||||||||| ||||    
T  1015 tatgtatcattactc 1029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 915 - 1029
Alignment:
Q  12 agagaagaagaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtt 111  Q
    |||| ||| |||||||||||||| |||||||||| | ||  || | || |||||| ||||||||||| ||| ||  ||||||||||||||||| | |||     
T  915 agaggagaggaaagagaaagtgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtc 1014  T
Q  112 tatgtatcataactc 126  Q
    |||||||||| ||||    
T  1015 tatgtatcattactc 1029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 8858 - 8963
Alignment:
Q  21 gaaagagaaagtgtacttgtgcggggtccatatgtccacatgtcagatttttgtgtgggtgtcaataggtgtattgccacctaagggtgtttatgtatca 120  Q
    |||||||||| |||||||||| ||||||||  || | |  ||||| |||||||||| | ||||||   |||||||| ||| ||||| ||| ||| |||||    
T  8858 gaaagagaaaatgtacttgtgtggggtccacgtgactatgtgtcaaatttttgtgtagatgtcaaatagtgtattgtcacttaaggatgtctatatatca 8957  T
Q  121 taactc 126  Q
    ||||||    
T  8958 taactc 8963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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