View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4517-Insertion-1 (Length: 1150)
Name: NF4517-Insertion-1
Description: NF4517
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4517-Insertion-1 |
 | |
|
| [»] scaffold0190 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 586; Significance: 0; HSPs: 13)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 586; E-Value: 0
Query Start/End: Original strand, 7 - 628
Target Start/End: Original strand, 39082633 - 39083254
Alignment:
| Q |
7 |
atcatccttggtctaacacctatgcttaaaacgtaacgaaaatcttcttctgggtcgagttttttgcatggaacaacacatcgccatacgtgagttaaca |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
39082633 |
atcatccttggtctaacacctatgcttaaaacgtaacgaaaatcttcttctgggtcgagttttttgcatcgaacaacacatcgccatacgtgagttaaca |
39082732 |
T |
|
| Q |
107 |
acgcttgaagtgaagatattttgatttgaacattctctgttttggtttcttcatttgcttttgatttcagttccgcgattttctcctttgtcaaatggaa |
206 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
39082733 |
acgcttgaagtgaagatattttgatttgaacattctctgttttggtttcttcatttgcttttgatttcagttccgcgattttctcctttgtgaaatggaa |
39082832 |
T |
|
| Q |
207 |
tattctttcaggtaagttctgtcgcggttttctactttgtgattcggtttttgtgaaaggaaatcgtattggaagttcaacgttgtttgggaaccaacgt |
306 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39082833 |
tattctttcaggtaagttctgtcgcggttttctacattgtgattcggtttttgtgaaaggaaatcgtattggaagttcaacgttgtttgggaaccaacgt |
39082932 |
T |
|
| Q |
307 |
tgaaatgaagggagtttggatattttgtgggaaccttttgagatttcagaccaagaattgacgaaatgccaaaatgacttgccgtctgaaacagcatggt |
406 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |
|
|
| T |
39082933 |
tgaaatgaagggagtttggatattttgtgggaaccttttgagatttcagaccaagaattgacgaaatgccaaaatgacttgccgtctaaaacaacatggt |
39083032 |
T |
|
| Q |
407 |
tgacagtgaaaccaatgaagatgccgttagctaactccgttacttggactgctagaattggttgagacgtggcttcgtagtttttaatgccgttaagtgg |
506 |
Q |
| |
|
||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39083033 |
tgacagtgaaagcaatgaagataccgttacttaactccgttacttggactgctagaattggttgagacgtggcttcgtagtttttaatgccgttaagtgg |
39083132 |
T |
|
| Q |
507 |
gaaaaatgagtgaactatagaaggaacatagtctggtttaaggatgtcggaaacacttgtgttttctgcttttgcgtggatgaagagagcaccaaggttg |
606 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39083133 |
gaaaaatgagtgaactatagaaggaacatagtctggtttaaggatgtcggaaacacttgtgttttctgcttttgcgtggatgaagagagcaccaaggttg |
39083232 |
T |
|
| Q |
607 |
ttgcaaatgatggaacatgatg |
628 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
39083233 |
ttgcaaatgatggaacatgatg |
39083254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 386; E-Value: 0
Query Start/End: Original strand, 8 - 629
Target Start/End: Original strand, 39088288 - 39088909
Alignment:
| Q |
8 |
tcatccttggtctaacacctatgcttaaaacgtaacgaaaatcttcttctgggtcgagttttttgcatggaacaacacatcgccatacgtgagttaacaa |
107 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||| |||| |||||| |
|
|
| T |
39088288 |
tcatccttggtctaacacctataactaaaacgtaacgaaaatcttcttctggatcgagttttttgcttcgaacaacacatcgccatacatgagataacaa |
39088387 |
T |
|
| Q |
108 |
cgcttgaagtgaagatattttgatttgaacattctctgttttggtttcttcatttgcttttgatttcagttccgcgattttctcctttgtcaaatggaat |
207 |
Q |
| |
|
||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
39088388 |
cgcttgaagcgaagatattttcgtttgaacattctttgttttggtttcttcatttgcttttgatttcagttccgcaattttctcctttgtaaaatggaaa |
39088487 |
T |
|
| Q |
208 |
attctttcaggtaagttctgtcgcggttttctactttgtgattcggtttttgtgaaaggaaatcgtattggaagttcaacgttgtttgggaaccaacgtt |
307 |
Q |
| |
|
|||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||| |
|
|
| T |
39088488 |
attctttcaggtaagttctgcggaggttttctacgttgtgattcggtttttgtgaaaggaaagcgtattggaagttcaacttcgtttgggaaccaacgtt |
39088587 |
T |
|
| Q |
308 |
gaaatgaagggagtttggatattttgtgggaaccttttgagatttcagaccaagaattgacgaaatgccaaaatgacttgccgtctgaaacagcatggtt |
407 |
Q |
| |
|
|||||||||||||||| | ||| | ||| | ||||||||||| ||||||| ||||| |||||||||||| ||||||||| ||||| | ||||| |
|
|
| T |
39088588 |
gaaatgaagggagttttggtatactctggaagttttttgagatttgtgaccaagtattgatgaaatgccaaaacatcttgccgtcacaaacaacgtggtt |
39088687 |
T |
|
| Q |
408 |
gacagtgaaaccaatgaagatgccgttagctaactccgttacttggactgctagaattggttgagacgtggcttcgtagtttttaatgccgttaagtggg |
507 |
Q |
| |
|
|| ||| ||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||| || ||||||||||||||||||| |||||||||||| |
|
|
| T |
39088688 |
gagagtcaaaccaatgaagatgccattagctaactccgttacttgaactcctagaattggttgtgaagtggcttcgtagtttttaactccgttaagtggg |
39088787 |
T |
|
| Q |
508 |
aaaaatgagtgaactatagaaggaacatagtctggtttaaggatgtcggaaacacttgtgttttctgcttttgcgtggatgaagagagcaccaaggttgt |
607 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||| || || |||||||||| ||||| |||||||||||||||||||||| ||||| |
|
|
| T |
39088788 |
aaaaatgagtgaactatagaaggaacatagtttggtttaaggatgtctgatacggttgtgttttccgctttggcgtggatgaagagagcaccaatgttgt |
39088887 |
T |
|
| Q |
608 |
tgcaaatgatggaacatgatgt |
629 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
39088888 |
tgcaaatgatggaacatgatgt |
39088909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 7 - 629
Target Start/End: Original strand, 39091678 - 39092300
Alignment:
| Q |
7 |
atcatccttggtctaacacctatgcttaaaacgtaacgaaaatcttcttctgggtcgagttttttgcatggaacaacacatcgccatacgtgagttaaca |
106 |
Q |
| |
|
||||||||||||||||||||||| ||||||| |||| ||||||||||| ||| || |||||||||| | ||||||||||||||||||| |||| ||||| |
|
|
| T |
39091678 |
atcatccttggtctaacacctatacttaaaatataacaaaaatcttcttgtggatcaagttttttgcttcgaacaacacatcgccatacatgagataaca |
39091777 |
T |
|
| Q |
107 |
acgcttgaagtgaagatattttgatttgaacattctctgttttggtttcttcatttgcttttgatttcagttccgcgattttctcctttgtcaaatggaa |
206 |
Q |
| |
|
| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
39091778 |
gcacttgaagcgaagatattttgatttgaacattctctgttttggtttcttcggttgcttttgatttcagttccgcaattttctcctttgtgaaatggaa |
39091877 |
T |
|
| Q |
207 |
tattctttcaggtaagttctgtcgcggttttctactttgtgattcggtttttgtgaaaggaaatcgtattggaagttcaacgttgtttgggaaccaacgt |
306 |
Q |
| |
|
|||||||||||||||||||| | ||||||||||||| || ||| |||| ||||||||| |||| |||||||||||||| || ||||||||||||||| |
|
|
| T |
39091878 |
aattctttcaggtaagttctggggaggttttctactttttgcttctgtttctgtgaaagggaatcatattggaagttcaatgtcatttgggaaccaacgt |
39091977 |
T |
|
| Q |
307 |
tgaaatgaagggagtttggatattttgtgggaaccttttgagatttcagaccaagaattgacgaaatgccaaaatgacttgccgtctgaaacagcatggt |
406 |
Q |
| |
|
| |||||||||||||| | || || |||||| ||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
39091978 |
ttgaatgaagggagttttgttacttcgtgggagtttttggagatttgtgaccaagtattgacgaaatgccaaaatgacttgccgtctgaaacaacatggt |
39092077 |
T |
|
| Q |
407 |
tgacagtgaaaccaatgaagatgccgttagctaactccgttacttggactgctagaattggttgagacgtggcttcgtagtttttaatgccgttaagtgg |
506 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||| || |||||||||| |||||||| ||||| ||||| |
|
|
| T |
39092078 |
tgacagtgaaaccaatgaagatgccgttggctaactccgttacttggacggctaagattggttgtgaagtggcttcgtggtttttaacaccgtttagtgg |
39092177 |
T |
|
| Q |
507 |
gaaaaatgagtgaactatagaaggaacatagtctggtttaaggatgtcggaaacacttgtgttttctgcttttgcgtggatgaagagagcaccaaggttg |
606 |
Q |
| |
|
||||||||| ||||| || |||||||| |||| ||||| |||||||| || || |||| ||||| |||||||| |||| |||||||||||| |||||| |
|
|
| T |
39092178 |
gaaaaatgaatgaacaatggaaggaacgtagtttggttcaaggatgtttgatacggttgtattttccgcttttgcatggacgaagagagcaccgaggttg |
39092277 |
T |
|
| Q |
607 |
ttgcaaatgatggaacatgatgt |
629 |
Q |
| |
|
||||||| ||||||||||||||| |
|
|
| T |
39092278 |
ttgcaaaggatggaacatgatgt |
39092300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 670 - 1006
Target Start/End: Original strand, 39083299 - 39083632
Alignment:
| Q |
670 |
gtgattataagacggcctgttaagggtgggaaataagagagtgtcgtagaaagtgtttgtttcaaatggttgattaggttttggttaggaatgggttggc |
769 |
Q |
| |
|
|||||||| ||||||||||||||| |||||||||| || ||||| |||||||||||||||||||||||||||||| |||||||||| ||| |
|
|
| T |
39083299 |
gtgattatgagacggcctgttaagagtgggaaataggaaagtgttgtagaaagtgtttgtttcaaatggttgatttggttttggtt----------tggt |
39083388 |
T |
|
| Q |
770 |
ggaaaagaaggcctttttggatggtttcaagtgggagaaattgaagatcccatggtgttaattcgattatctgataatcagttgagttgagattattgtt |
869 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39083389 |
ggaaaagaaggcctttttggatggtttcaagtgggagaaattgaagatcccatggtgttaattcgattatctgataatcagttgagttgagattattgtt |
39083488 |
T |
|
| Q |
870 |
gtcaattggtgcttgaacttttgttgtggatatcacactaatggaat-catga--gagcagctttgatgagatac-aaggaccagttatcttatcttta- |
964 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
39083489 |
gtcaattggtgcttgaacttttgttgtggatatcacactaatggaatccatgaagaagcagctttgatgagatacaaaggaccaattatcttatctttac |
39083588 |
T |
|
| Q |
965 |
cagagtactacacccgtgc-actcatgtatc-gaaataatattt |
1006 |
Q |
| |
|
||||||||||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
39083589 |
cagagtactacacccgtgcaactcatgtatcaaaaataatattt |
39083632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 145; E-Value: 1e-75
Query Start/End: Original strand, 670 - 905
Target Start/End: Original strand, 39088938 - 39089176
Alignment:
| Q |
670 |
gtgattataagacggcctgttaagggtgggaaataagagagtgtcgtagaaagtgtttgtttcaaatggttgattaggttttggttaggaatgggttggc |
769 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| || ||||| || ||||||||||||||||||||||||||| |||||||||| ||||||| |||| |
|
|
| T |
39088938 |
gtgattataagacggcctgttaagggtgggaaataggaaagtgttgtggaaagtgtttgtttcaaatggttgatttggttttggtttggaatggtttggt |
39089037 |
T |
|
| Q |
770 |
ggaaaagaaggcctttttggatggtttcaagtgggagaaattgaagatcccatggtgttaattcgattatctgataatca---gttgagttgagattatt |
866 |
Q |
| |
|
||||||||| ||||||||| |||||||||| | ||||||||| ||||||||||||||||| |||||||| |||||||| |||||||||||||||| |
|
|
| T |
39089038 |
ggaaaagaatgcctttttgaatggtttcaactaagagaaattggagatcccatggtgttaaatcgattattcgataatcacttcttgagttgagattatt |
39089137 |
T |
|
| Q |
867 |
gttgtcaattggtgcttgaacttttgttgtggatatcac |
905 |
Q |
| |
|
|| ||||||||||||||||||| |||||||||||||||| |
|
|
| T |
39089138 |
gtggtcaattggtgcttgaactgttgttgtggatatcac |
39089176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 117; E-Value: 5e-59
Query Start/End: Original strand, 294 - 518
Target Start/End: Original strand, 39071464 - 39071688
Alignment:
| Q |
294 |
tgggaaccaacgttgaaatgaagggagtttggatattttgtgggaaccttttgagatttcagaccaagaattgacgaaatgccaaaatgacttgccgtct |
393 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
39071464 |
tgggaaccaacgttgaaatgaagggagttttgatattttgtgggaacctttcaagatttgggaccaagaattgacgaaatgccaaaatgacttggcgtct |
39071563 |
T |
|
| Q |
394 |
gaaacagcatggttgacagtgaaaccaatgaagatgccgttagctaactccgttacttggactgctagaattggttgagacgtggcttcgtagtttttaa |
493 |
Q |
| |
|
| |||| |||||| ||||| ||||||||| ||| ||| ||||||||||||||||||||||||| |||||| ||||| |||||||||||||||| |
|
|
| T |
39071564 |
gcaacaatgtggttgcatgtgaattcaatgaagacgccattacttaactccgttacttggactgctagagttggttttgacgtagcttcgtagtttttaa |
39071663 |
T |
|
| Q |
494 |
tgccgttaagtgggaaaaatgagtg |
518 |
Q |
| |
|
|||||||| ||| ||||| ||||| |
|
|
| T |
39071664 |
cgccgttaaatggaaaaaacgagtg |
39071688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 670 - 863
Target Start/End: Original strand, 39071831 - 39072021
Alignment:
| Q |
670 |
gtgattataagacggcctgttaagggtgggaaataagagagtgtcgtagaaagtgtttgtttcaaatggttgattaggttttggttaggaatgggttggc |
769 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||| |
|
|
| T |
39071831 |
gtgattataagacggc---ttaagggtgggaaataagagagtgttgtagaaagtgtttgtttcaaatggttgatttggttttggtttggaatgggttggt |
39071927 |
T |
|
| Q |
770 |
ggaaaagaaggcctttttggatggtttcaagtgggagaaattgaagatcccatggtgttaattcgattatctgataatcagttgagttgagatt |
863 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||||| || ||||| |||||||||||||||| || ||| | | ||||||| ||||||||||||| |
|
|
| T |
39071928 |
ggaaaagatggcctctttggatggtttcaagtggaaggaattggagatcccatggtgttagatcaattttttcataatcacttgagttgagatt |
39072021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 670 - 905
Target Start/End: Original strand, 39092335 - 39092582
Alignment:
| Q |
670 |
gtgattataagacggcctgttaagggtgggaaataagagagtgtcgtagaaagtgtttgtttcaaatggttgattaggttttggtt---------aggaa |
760 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| || ||||| || ||||| ||||||||||||||||||||| |||||||||| ||||| |
|
|
| T |
39092335 |
gtgattataagacggcccgttaagggtgggaaataggaaagtgttgtggaaagggtttgtttcaaatggttgatttggttttggtttgatgtgctaggaa |
39092434 |
T |
|
| Q |
761 |
tgggttggcgg---aaaagaaggcctttttggatggtttcaagtgggagaaattgaagatcccatggtgttaattcgattatctgataatcagttgagtt |
857 |
Q |
| |
|
||||||| || |||||||||||||||||||||||||||||||| || ||| | ||||||||||||||||| | |||| | ||||||| | ||||||| |
|
|
| T |
39092435 |
tgggttgttggtgaaaaagaaggcctttttggatggtttcaagtggaaggaatcggagatcccatggtgttaaattgattttatgataattacttgagtt |
39092534 |
T |
|
| Q |
858 |
gagattattgttgtcaattggtgcttgaacttttgttgtggatatcac |
905 |
Q |
| |
|
||||| |||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
39092535 |
aagattgttgttgtcaattggtgcttgaactgttgttgtggatatcac |
39092582 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 39071380 - 39071437
Alignment:
| Q |
160 |
tttgcttttgatttcagttccgcgattttctcctttgtcaaatggaatattctttcag |
217 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||| |
|
|
| T |
39071380 |
tttgcttttgatttcagttcctcgattttctcctttgtgaaatggaagattctttcag |
39071437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 39080442 - 39080499
Alignment:
| Q |
160 |
tttgcttttgatttcagttccgcgattttctcctttgtcaaatggaatattctttcag |
217 |
Q |
| |
|
|||||||||||||| |||||||||||||||| ||||| |||||||| |||||||||| |
|
|
| T |
39080442 |
tttgcttttgatttttgttccgcgattttctcttttgtgaaatggaagattctttcag |
39080499 |
T |
|
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Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 393
Target Start/End: Original strand, 39075867 - 39075922
Alignment:
| Q |
338 |
aaccttttgagatttcagaccaagaattgacgaaatgccaaaatgacttgccgtct |
393 |
Q |
| |
|
|||||| ||||||||||| |||||| |||| ||||||||||||||||||| ||||| |
|
|
| T |
39075867 |
aaccttgtgagatttcagcccaagagttgatgaaatgccaaaatgacttggcgtct |
39075922 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 626
Target Start/End: Original strand, 39098306 - 39098583
Alignment:
| Q |
349 |
atttcagaccaagaattgacgaaatgccaaaatgacttgccgtctgaaacagcatggttgacagtgaaaccaatgaagatgccgttagctaactccgtta |
448 |
Q |
| |
|
||||||||||| ||||||| |||||||||||| ||||| || || |||| |||| |||| | ||| |||||||| || || | | | | ||| || | |
|
|
| T |
39098306 |
atttcagaccatgaattgatgaaatgccaaaacgacttaccatcgacaacaacatgattgattgagaagccaatgaaaataccatcaacaagctcagtaa |
39098405 |
T |
|
| Q |
449 |
cttggactgctagaattggttgagacgtggcttcgtagtttttaatgccgttaagtgggaaaaatgagtgaactatagaaggaacatagtctggtttaag |
548 |
Q |
| |
|
|||| ||||| || | ||||| || ||| ||||||||||||| | |||| ||| ||||| |||||||| || ||||||||||||| |||||||| |
|
|
| T |
39098406 |
cttgaactgcaagcaatggttttgatgtgccttcgtagttttttactttattaaatggaaaaaaagagtgaacaatggaaggaacatagtttggtttaac |
39098505 |
T |
|
| Q |
549 |
gatgtcggaaacacttgtgttttctgcttttgcgtggatgaagagagcaccaaggttgttgcaaatgatggaacatga |
626 |
Q |
| |
|
|| ||| | |||||||||||||| ||| ||| || || || | ||||| |||||||| |||| |||| ||||||| |
|
|
| T |
39098506 |
aatatcgaagacacttgtgttttcagctgctgcatgaataaataacgcacctaggttgttacaaaggatgaaacatga |
39098583 |
T |
|
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Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 583 - 629
Target Start/End: Original strand, 39071753 - 39071799
Alignment:
| Q |
583 |
tggatgaagagagcaccaaggttgttgcaaatgatggaacatgatgt |
629 |
Q |
| |
|
|||| ||| || |||||||||||||||||||| |||||||||||||| |
|
|
| T |
39071753 |
tggacgaatagggcaccaaggttgttgcaaattatggaacatgatgt |
39071799 |
T |
|
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Target: scaffold0190 (Bit Score: 48; Significance: 8e-18; HSPs: 1)
Name: scaffold0190
Description:
Target: scaffold0190; HSP #1
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 298 - 493
Target Start/End: Original strand, 5020 - 5215
Alignment:
| Q |
298 |
aaccaacgttgaaatgaagggagtttggatattttgtgggaaccttttgagatttcagaccaagaattgacgaaatgccaaaatgacttgccgtctgaaa |
397 |
Q |
| |
|
|||||||| | ||||| || |||||||||||||| | ||||||| |||||||||| ||| ||||||| |||||||||||| ||| | || || || |
|
|
| T |
5020 |
aaccaacgatcaaatgttggaagtttggatattttaagacaacctttcgagatttcagcccacgaattgatgaaatgccaaaacgacgtaccatcaacaa |
5119 |
T |
|
| Q |
398 |
cagcatggttgacagtgaaaccaatgaagatgccgttagctaactccgttacttggactgctagaattggttgagacgtggcttcgtagtttttaa |
493 |
Q |
| |
|
| ||||| || ||||| |||||||||||||||| | |||||||||||||||||| ||| || | |||||| || || ||||||||||||||| |
|
|
| T |
5120 |
tcacgtggttaactgtgaagccaatgaagatgccgtcaactaactccgttacttggattgcaagtaatggttgtgatgttccttcgtagtttttaa |
5215 |
T |
|
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