View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4518-Insertion-6 (Length: 334)
Name: NF4518-Insertion-6
Description: NF4518
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4518-Insertion-6 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 8 - 334
Target Start/End: Original strand, 7830473 - 7830798
Alignment:
| Q |
8 |
cttaaacactttggaggcattactctaatcttaaaattttgaccatcaaagatcccaacctaaaccacgaagcaaacccatgaggattggatactagttt |
107 |
Q |
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| T |
7830473 |
cttaaacactttggaggcattactctaatcttaaaattttgaccatcaaagatcccaacctaaaccacgaagcaaacccatgaggattggatactagttt |
7830572 |
T |
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| Q |
108 |
tatttggtaaacatatannnnnnnnn-aaagaattttgtaaacatatattaatatacttcaattcttatgcaatatcaacacaaaatagatttaccataa |
206 |
Q |
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| T |
7830573 |
tatttggtaaacatttttttttttttgaaagaattttgtaaacatatattaatatacttcaattcttatgcaatatcaaaacaaaatagatttaccataa |
7830672 |
T |
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| Q |
207 |
tatcctatcatatctcatcattatatgtatatatctttggttactatatatgtcaatgttgttatttcataacatcggcgacaagctcattaccaaattt |
306 |
Q |
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| T |
7830673 |
tatcctatcatatctcatcattatatgtatatatctttagttactatata--tcaatgttgttatttcataacatcggcgacaaactcatttccaaattt |
7830770 |
T |
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| Q |
307 |
aacaaactttacaattagctctgtctga |
334 |
Q |
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| T |
7830771 |
aacaaactttacaattaactctgtctga |
7830798 |
T |
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