View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4518-Insertion-7 (Length: 301)

Name: NF4518-Insertion-7
Description: NF4518
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4518-Insertion-7
NF4518-Insertion-7
[»] chr3 (1 HSPs)
chr3 (7-301)||(6057316-6057610)


Alignment Details
Target: chr3 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 7 - 301
Target Start/End: Original strand, 6057316 - 6057610
Alignment:
Q  7 agatttagtagtgaggccggcagtgtttctccaaccatgttctccaattttgggcagtccctaattcttaactgttggagggaggtgagatggataaggc 106  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6057316 agatttagtagtgaggctggcagtgtttctccaaccatgttctccaattgtgggcagtccctaattcttaactgttggagggaggtgagatggataaggc 6057415  T
Q  107 ccttacaatccaacatctccaaactagaaaatgtaagtagtgttagtgacttaagggaagcatgtaacaaaccttcctttgggaaagatttgatcccatc 206  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6057416 ccttacaatccaacatttccaaactagaaaatgtaagtagtgttagagacttaagggaagcatgtaacaaaccttcctttgggaaagatttgatcccatc 6057515  T
Q  207 acatggaccttgaattgttacatcagtaagcatgttcatggaaggccaggacaggccagtaagtagtttctcgcaattcatgatgcgaatcgatc 301  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  6057516 acatggaccttgaattgttacatcagtaagcatgtccatggaaggccaggacagaccagtaagtagtttctcgcaattcatgatgcgaatcgatc 6057610  T

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