View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4519-Insertion-4 (Length: 615)
Name: NF4519-Insertion-4
Description: NF4519
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4519-Insertion-4 |
 | |
|
| [»] chr8 (18 HSPs) |
| |
|
Alignment Details
Target: chr8 (Bit Score: 571; Significance: 0; HSPs: 18)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 571; E-Value: 0
Query Start/End: Original strand, 8 - 615
Target Start/End: Original strand, 6363605 - 6364212
Alignment:
| Q |
8 |
ttgttagtttttcagtattttcttaacaatgttaaaccattaactttaccaagagnnnnnnnatgatgtgtggattcaccccagcaatcatctcccttgc |
107 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6363605 |
ttgttagtttttcagtattttcttaacaatgttaaaccattaactttaccaagagtttttttatgatgtgtggattcaccccagcaatcatctcccttgc |
6363704 |
T |
|
| Q |
108 |
aaattcctcatcagtcatccatgcagaatgatcgactgttcaaaattaaaatttcaaaagatccatgaactttatttctctgatatatgttaatagtaat |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6363705 |
aaattcctcatcagtcatccatgcagaatgatcgactgttcaaaattaaaatttcaaaagatccatgaactttatttctctgatatatgttaatagtaat |
6363804 |
T |
|
| Q |
208 |
aggaatgtgtgactaattaatataaaccttgaatcacttttggtggtggaaacctaagtgccgcttcaccgtcagttcggaaaagttccttgaacaatgg |
307 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
6363805 |
aggaatgtgtgactaattaatataaaccttgaatcacttttggtggtggaaacttaagtgccgcttcaccatcagttcggaaaagttccttgaacaatgg |
6363904 |
T |
|
| Q |
308 |
tattgggctaagttcgcttagtatatcagtaggaagcctgattccaccttcatagagcgagcgcacatcttcaaaggtgttaaactcaggctcatggaat |
407 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6363905 |
tattgggctaagttcacttagtatatcagtaggaagcctgattccaccttcatagagcgagcgcacatcttcaaaggtgttaaactcaggctcatggaat |
6364004 |
T |
|
| Q |
408 |
tgtaatgtaactatagatcttaatcgaggtatgacattttgagatgcagatttgagtatgtgaacaagaaagtctgatgactttgtgtgtccaaatgatt |
507 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6364005 |
tgtaatgtaactatagatcttaatcgaggtatgacattttgagatgcagatttgagtatgtgaacaagaaagtctgatgactttgtgtgtccaaatgatt |
6364104 |
T |
|
| Q |
508 |
catctcttgggaggtaaacagtgtcacttcgactctcactcttaggatctgttcacaaatacaataacaatgtatgttttagaatcataaacagagtaaa |
607 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
6364105 |
catctcttgggaggtaaacagtgtcacttcgactctcactcttaggatctgttcacaaatacaataacaatgtatgttttagaatcataagcagagtaaa |
6364204 |
T |
|
| Q |
608 |
catttgta |
615 |
Q |
| |
|
|||||||| |
|
|
| T |
6364205 |
catttgta |
6364212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 223 - 591
Target Start/End: Original strand, 6353024 - 6353392
Alignment:
| Q |
223 |
attaatataaaccttgaatcacttttggtggtggaaacctaagtgccgcttcaccgtcagttcggaaaagttccttgaacaatggtattgggctaagttc |
322 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||| ||||||| |||||| |||| |||||||||||||||||||||||||||||| |||| | |
|
|
| T |
6353024 |
attaatatataccttgaatcacttttggtggtggaaacttaagtgcttgttcaccatcagatcggaaaagttccttgaacaatggtattggactaatctg |
6353123 |
T |
|
| Q |
323 |
gcttagtatatcagtaggaagcctgattccaccttcatagagcgagcgcacatcttcaaaggtgttaaactcaggctcatggaattgtaatgtaactata |
422 |
Q |
| |
|
|||||||| ||||||||||||| | |||||||| || ||||| ||||||||||||| |||||||||||||||||| | || || |||||||||||||| | |
|
|
| T |
6353124 |
gcttagtacatcagtaggaagcttaattccaccctcgtagagagagcgcacatcttgaaaggtgttaaactcagggttattgagttgtaatgtaactaca |
6353223 |
T |
|
| Q |
423 |
gatcttaatcgaggtatgacattttgagatgcagatttgagtatgtgaacaagaaagtctgatgactttgtgtgtccaaatgattcatctcttgggaggt |
522 |
Q |
| |
|
||||| | | |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||| |
|
|
| T |
6353224 |
gatctcagttgaggtatgacattttgagatgctgatttgagtatgtaaacaagaaagtctgatgactttgtgtgtccaaaagattcatctcttggaaggt |
6353323 |
T |
|
| Q |
523 |
aaacagtgtcacttcgactctcactcttaggatctgttcacaaatacaataacaatgtatgttttagaa |
591 |
Q |
| |
|
|||||||| ||||||| |||||||||||||||||||||| | ||| ||||||||| |||||||||||| |
|
|
| T |
6353324 |
aaacagtgggacttcgagtctcactcttaggatctgttcaaatatataataacaatatatgttttagaa |
6353392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 225 - 564
Target Start/End: Original strand, 7459924 - 7460263
Alignment:
| Q |
225 |
taatataaaccttgaatcacttttggtggtggaaacctaagtgccgcttcaccgtcagttcggaaaagttccttgaacaatggtattgggctaagttcgc |
324 |
Q |
| |
|
||||||| |||||||| |||||| |||||||||||| ||||| | |||||||| |||||||| |||||||| |||||||||||||||||||||| | || |
|
|
| T |
7459924 |
taatatataccttgaaccactttcggtggtggaaacttaagtacagcttcaccatcagttcgaaaaagttctttgaacaatggtattgggctaatctggc |
7460023 |
T |
|
| Q |
325 |
ttagtatatcagtaggaagcctgattccaccttcatagagcgagcgcacatcttcaaaggtgttaaactcaggctcatggaattgtaatgtaactataga |
424 |
Q |
| |
|
|||||| ||||||||||||| | |||||||| || ||||| ||||| | |||||||||||||||||||||||| | || || |||||||||| || |||| |
|
|
| T |
7460024 |
ttagtacatcagtaggaagcttaattccaccatcgtagagagagcgtatatcttcaaaggtgttaaactcagggttattgagttgtaatgtagctttaga |
7460123 |
T |
|
| Q |
425 |
tcttaatcgaggtatgacattttgagatgcagatttgagtatgtgaacaagaaagtctgatgactttgtgtgtccaaatgattcatctcttgggaggtaa |
524 |
Q |
| |
|
||| || ||||||||| | |||| ||| |||||||||| | | |||||||||| |||||||| ||| |||||||||||||||||||| | |||| |
|
|
| T |
7460124 |
tctcaaattaggtatgactctgtgagttgctgatttgagtacataaccaagaaagtcagatgacttcaagtgaccaaatgattcatctcttggaacgtaa |
7460223 |
T |
|
| Q |
525 |
acagtgtcacttcgactctcactcttaggatctgttcaca |
564 |
Q |
| |
|
| || ||||||||||||||||||||||||||||||||||| |
|
|
| T |
7460224 |
atagcgtcacttcgactctcactcttaggatctgttcaca |
7460263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 30 - 559
Target Start/End: Original strand, 6424518 - 6425034
Alignment:
| Q |
30 |
ttaacaatgttaaaccattaactttaccaagagnnnnnnnatgatgtgtggattcaccccagcaatcatctcccttgcaaattcctcatcagtcatccat |
129 |
Q |
| |
|
||||||||| ||||| |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6424518 |
ttaacaatgctaaactattaactttaccgtgagttttttgatgatgtgtggattcactccagcaatcatctcccttgcaaattcctcatcagtcatccac |
6424617 |
T |
|
| Q |
130 |
gcagaatgatcgactgttcaaaattaaaatttcaaaagatccatgaactttatttctctgat------atatgttaatagtaataggaatgtgtgactaa |
223 |
Q |
| |
|
||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||| | ||||||| ||| | ||||| | |||||| |
|
|
| T |
6424618 |
gcagaatgatcgactactcaaaataaaaatttcaaaagatccatgaacttgatttctctagtatatgcatatgttgataagattaggagtttgtgac--- |
6424714 |
T |
|
| Q |
224 |
ttaatataaaccttgaatcacttttggtggtggaaacctaagtgccgcttcaccgtcagttcggaaaagttccttgaacaatggtattgggctaagttcg |
323 |
Q |
| |
|
||||||| |||||||| |||||| ||||||| |||| |||| | | | |||| |||| ||| ||||||||| ||||||||||||||||||||| | | |
|
|
| T |
6424715 |
-taatatataccttgaaccactttaggtggtgaaaacttaagggttgatgcaccatcagatcgaaaaagttccgtgaacaatggtattgggctaacgttg |
6424813 |
T |
|
| Q |
324 |
cttagtatatcagtaggaagcctgattccaccttcatagagcgagcgcacatcttcaaaggtgttaaactcaggctcatggaattgtaatgtaactatag |
423 |
Q |
| |
|
|| || | || ||||| ||| |||||||||| || || || || ||||| ||||||||| |||||||||| ||| |||||| || |
|
|
| T |
6424814 |
ctaagaaaattggtaggtagcttgattccaccatcgtaaagtgaccgcacgtcttcaaagttgttaaactc-----------tttg----ctaactacag |
6424898 |
T |
|
| Q |
424 |
atcttaatcgaggtatgacattttgagatgcagatttgagtatgtgaacaagaaagtctgatgactttgtgtgtccaaatgattcatctcttgggaggta |
523 |
Q |
| |
|
|| | || |||||||| |||||||||||| |||||||||||| | ||||||||||||| ||||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
6424899 |
atttcaaggaaggtatgatattttgagatgctgatttgagtatgaaagcaagaaagtctgaagactttgtgtgtccaaatgcctcatctcttggaaggta |
6424998 |
T |
|
| Q |
524 |
aacagtgtcacttcgactctcactcttaggatctgt |
559 |
Q |
| |
|
||||||| | || ||||||||||||||||||||||| |
|
|
| T |
6424999 |
aacagtgccgctccgactctcactcttaggatctgt |
6425034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 233 - 571
Target Start/End: Original strand, 6275191 - 6275527
Alignment:
| Q |
233 |
accttgaatcacttttggtggtggaaacctaagtgccgcttcaccgtcagttcggaaaagttccttgaacaatggtattgggctaagttcgcttagtata |
332 |
Q |
| |
|
||||| ||| ||||| |||||||||||| | || |||| |||||| ||||||||||| ||||||||||| |||||||| |||||||||| ||| ||| || |
|
|
| T |
6275191 |
acctttaatgactttaggtggtggaaactttagggccgattcaccatcagttcggaagagttccttgaaaaatggtatagggctaagtttgctaagtgta |
6275290 |
T |
|
| Q |
333 |
tcagtaggaagcctgattccaccttcatagagcgagcgcacatcttcaaaggtgttaaactcaggctcatggaattgtaatgtaactatagatcttaatc |
432 |
Q |
| |
|
|||||| | | || ||||| ||||| | || |||||||| |||||| ||||||| || |||| || |||||||||||||| | |||| |||| |
|
|
| T |
6275291 |
ctagtaggtaatttaatcccaccatcataaaatgatcgcacatcatcaaagctgttaaattctggcttattgaattgtaatgtaattgcagattgtaatt |
6275390 |
T |
|
| Q |
433 |
gaggtatgacattttgagatgcagatttgagtatgtgaacaagaaagtctgatgactttgtgtgtccaaatgattcatctcttgggaggtaaacagtgtc |
532 |
Q |
| |
|
|||||||||||||||||||| | ||||||||||||| ||||||||| ||||| ||||| ||| |||||||||||||||||||| || |||| | || |
|
|
| T |
6275391 |
gaggtatgacattttgagatactgatttgagtatgtaaacaagaaaatctgaagacttcaagtgaccaaatgattcatctcttggaagataaatatactc |
6275490 |
T |
|
| Q |
533 |
acttcgactctcactcttaggatctgttcacaaatacaa |
571 |
Q |
| |
|
|| || |||||||| |||||||||| ||||||||||| |
|
|
| T |
6275491 |
gctccgtctctcacttttaggatctg--cacaaatacaa |
6275527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 240 - 542
Target Start/End: Original strand, 7471517 - 7471817
Alignment:
| Q |
240 |
atcacttttggtggtggaaacctaagtgccgcttcaccgtcagttcggaaaagttccttgaacaatggtattgggctaagttcgcttagtatatcagtag |
339 |
Q |
| |
|
|||||||| |||||||||||| ||||| | |||||||| |||||||| ||| |||| |||||||||||||||||||||| | |||||||| |||||||| |
|
|
| T |
7471517 |
atcactttaggtggtggaaacttaagtactgcttcaccatcagttcgaaaatgttctttgaacaatggtattgggctaatcttgcttagtacatcagtag |
7471616 |
T |
|
| Q |
340 |
gaagcctgattccaccttcatagagcgagcgcacatcttcaaaggtgttaaactcaggctcatggaattgtaatgtaactatagatcttaatcgaggtat |
439 |
Q |
| |
|
||||| | |||||||| || ||||| || || ||||||||||||||||||||| || | || || ||||||||||||| ||||||| || ||| || |
|
|
| T |
7471617 |
gaagcttaattccaccatcgtagagagatcgtgtatcttcaaaggtgttaaactcggggttattgagttgtaatgtaactttagatctcaaattaggcat |
7471716 |
T |
|
| Q |
440 |
gacattttgagatgcagatttgagtatgtgaacaagaaagtctgatgactttgtgtgtccaaatgattcatctcttgggaggtaaacagtgtcacttcga |
539 |
Q |
| |
|
||| | |||| ||| |||||||||| | | |||||||||| |||||||| ||| |||||||||||||||||||| | ||||| || ||| |||||| |
|
|
| T |
7471717 |
gac--tctgagttgctgatttgagtacataaccaagaaagtcagatgacttcaagtgaccaaatgattcatctcttggaacgtaaatagcgtcccttcga |
7471814 |
T |
|
| Q |
540 |
ctc |
542 |
Q |
| |
|
||| |
|
|
| T |
7471815 |
ctc |
7471817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 218 - 564
Target Start/End: Original strand, 6322043 - 6322389
Alignment:
| Q |
218 |
gactaattaatataaaccttgaatcacttttggtggtggaaacctaagtgccgcttcaccgtcagttcggaaaagttccttgaacaatggtattgggcta |
317 |
Q |
| |
|
|||||| ||||| | ||||||||||||||| || ||||||||| | || |||| |||||| ||||||||||| ||||||||||| |||||||| |||||| |
|
|
| T |
6322043 |
gactaactaatagataccttgaatcactttaggcggtggaaactttagggccgattcaccatcagttcggaagagttccttgaaaaatggtatggggcta |
6322142 |
T |
|
| Q |
318 |
agttcgcttagtatatcagtaggaagcctgattccaccttcatagagcgagcgcacatcttcaaaggtgttaaactcaggctcatggaattgtaatgtaa |
417 |
Q |
| |
|
|||| ||| |||||| |||||| | | || ||||| ||||| | || |||||||| |||||| | ||||| || |||| || || ||||||||||| |
|
|
| T |
6322143 |
agtttgctaagtatactagtaggtaatttaatcccaccatcataaaatgatcgcacatcatcaaagctattaaattctggcttattgagttgtaatgtaa |
6322242 |
T |
|
| Q |
418 |
ctatagatcttaatcgaggtatgacattttgagatgcagatttgagtatgtgaacaagaaagtctgatgactttgtgtgtccaaatgattcatctcttgg |
517 |
Q |
| |
|
| |||| |||| ||||||||| | ||||||| || ||||||||||||| ||||||||| ||||| ||||| ||| ||||||| |||||||||||| |
|
|
| T |
6322243 |
ttgcagattgtaattgaggtatgaaactttgagaagctgatttgagtatgtaaacaagaaaatctgaagacttcaagtgaccaaatgcttcatctcttgg |
6322342 |
T |
|
| Q |
518 |
gaggtaaacagtgtcacttcgactctcactcttaggatctgttcaca |
564 |
Q |
| |
|
| ||||||| ||| || |||||||| |||||||||||||||| |
|
|
| T |
6322343 |
aacgtaaacaaagtcgtcccgtctctcacttttaggatctgttcaca |
6322389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 233 - 547
Target Start/End: Original strand, 6332642 - 6332956
Alignment:
| Q |
233 |
accttgaatcacttttggtggtggaaacctaagtgccgcttcaccgtcagttcggaaaagttccttgaacaatggtattgggctaagttcgcttagtata |
332 |
Q |
| |
|
||||| || |||||| ||| |||||||| | || |||| |||||| ||||||| || ||||||| ||||| |||||| ||||||| || ||| ||| | |
|
|
| T |
6332642 |
accttcaaccactttaggtcgtggaaactttagggccgattcaccatcagttctgaggagttcctggaacactggtatggggctaattttgctaagtgca |
6332741 |
T |
|
| Q |
333 |
tcagtaggaagcctgattccaccttcatagagcgagcgcacatcttcaaaggtgttaaactcaggctcatggaattgtaatgtaactatagatcttaatc |
432 |
Q |
| |
|
| |||||| | |||||||| | ||| | || || ||||||||||| ||||||||||| |||| || |||||||||||||| | ||||| |||| |
|
|
| T |
6332742 |
ttagtaggtaattcaattccaccatgatataatgaacggacatcttcaaaagtgttaaactctggctgattgaattgtaatgtaagtgcagatcgtaatt |
6332841 |
T |
|
| Q |
433 |
gaggtatgacattttgagatgcagatttgagtatgtgaacaagaaagtctgatgactttgtgtgtccaaatgattcatctcttgggaggtaaacagtgtc |
532 |
Q |
| |
|
||||||| |||||||||||||| ||||| ||||| | ||||||||||||||| ||||| ||| |||||||||||||||||||| | ||||||| ||| |
|
|
| T |
6332842 |
gaggtataacattttgagatgctgatttcagtatataaacaagaaagtctgaagacttcaagtggccaaatgattcatctcttggaatgtaaacaaagtc |
6332941 |
T |
|
| Q |
533 |
acttcgactctcact |
547 |
Q |
| |
|
|| ||||||||||| |
|
|
| T |
6332942 |
gctccgactctcact |
6332956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 26 - 149
Target Start/End: Original strand, 6352818 - 6352941
Alignment:
| Q |
26 |
tttcttaacaatgttaaaccattaactttaccaagagnnnnnnnatgatgtgtggattcaccccagcaatcatctcccttgcaaattcctcatcagtcat |
125 |
Q |
| |
|
||||||||||| ||||||| |||| ||||||| | || ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6352818 |
tttcttaacaaagttaaactattagctttaccgaaagttttttgatgatgtgtgggttcaccccagcaatcatctcccttgcaaattcctcatcagtctg |
6352917 |
T |
|
| Q |
126 |
ccatgcagaatgatcgactgttca |
149 |
Q |
| |
|
|||||||||||| || |||||||| |
|
|
| T |
6352918 |
ccatgcagaatggtccactgttca |
6352941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 6321904 - 6321984
Alignment:
| Q |
73 |
atgtgtggattcaccccagcaatcatctcccttgcaaattcctcatcagtcatccatgcagaatgatcgactgttcaaaat |
153 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||| |||| |||| ||||||| |
|
|
| T |
6321904 |
atgtgtggattcacaccagcaatcatctcccttgcaaattcttcatcagtcatccacgcagactgattaactgctcaaaat |
6321984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 6332478 - 6332558
Alignment:
| Q |
73 |
atgtgtggattcaccccagcaatcatctcccttgcaaattcctcatcagtcatccatgcagaatgatcgactgttcaaaat |
153 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||| |||| ||||||| |
|
|
| T |
6332478 |
atgtgtggattcacaccagcaatcatctcccttgcaaattctccatcagtcatccatgcagactgattaactgctcaaaat |
6332558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 78 - 133
Target Start/End: Original strand, 6391484 - 6391539
Alignment:
| Q |
78 |
tggattcaccccagcaatcatctcccttgcaaattcctcatcagtcatccatgcag |
133 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6391484 |
tggattcacaccagcaatcatctcccttgcaaattcctcatcagtcatccatgcag |
6391539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 70 - 134
Target Start/End: Original strand, 7459651 - 7459715
Alignment:
| Q |
70 |
atgatgtgtggattcaccccagcaatcatctcccttgcaaattcctcatcagtcatccatgcaga |
134 |
Q |
| |
|
||||| || |||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |
|
|
| T |
7459651 |
atgatatgaggattcaccccagcaatcatctgccttgcgaattcctcatcagtcatccatgcaga |
7459715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 6289522 - 6289602
Alignment:
| Q |
73 |
atgtgtggattcaccccagcaatcatctcccttgcaaattcctcatcagtcatccatgcagaatgatcgactgttcaaaat |
153 |
Q |
| |
|
|||||||||||||| |||||||||||||| |||| |||||| ||||||||||||||| |||| |||| |||| ||||||| |
|
|
| T |
6289522 |
atgtgtggattcacaccagcaatcatctctcttgtaaattcttcatcagtcatccatccagactgattaactgctcaaaat |
6289602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 133
Target Start/End: Original strand, 6410646 - 6410701
Alignment:
| Q |
78 |
tggattcaccccagcaatcatctcccttgcaaattcctcatcagtcatccatgcag |
133 |
Q |
| |
|
||||||||| |||||||| ||||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
6410646 |
tggattcacaccagcaattatctctcttgcgaattcctcatcagtcatccatgcag |
6410701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 70 - 139
Target Start/End: Original strand, 6275032 - 6275101
Alignment:
| Q |
70 |
atgatgtgtggattcaccccagcaatcatctcccttgcaaattcctcatcagtcatccatgcagaatgat |
139 |
Q |
| |
|
|||||||||||||| || |||||||||||||| |||| |||||| || |||||||||||| |||| |||| |
|
|
| T |
6275032 |
atgatgtgtggatttacaccagcaatcatctctcttgtaaattcttcgtcagtcatccatccagattgat |
6275101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 437 - 562
Target Start/End: Original strand, 6289818 - 6289943
Alignment:
| Q |
437 |
tatgacattttgagatgcagatttgagtatgtgaacaagaaagtctgatgactttgtgtgtccaaatgattcatctcttgggaggtaaacagtgtcactt |
536 |
Q |
| |
|
||||| || ||||||||| ||||| |||| || | ||||||| ||||| ||||| |||| ||||||||||||||||||| | ||||||| | | | |
|
|
| T |
6289818 |
tatgaaatcttgagatgctgatttcagtaggttatcaagaaattctgaagacttcttgtgatcaaatgattcatctcttggaatgtaaacaaagccgttc |
6289917 |
T |
|
| Q |
537 |
cgactctcactcttaggatctgttca |
562 |
Q |
| |
|
||||||||||| |||||||||||||| |
|
|
| T |
6289918 |
cgactctcacttttaggatctgttca |
6289943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 6370575 - 6370628
Alignment:
| Q |
79 |
ggattcaccccagcaatcatctcccttgcaaattcctcatcagtcatccatgca |
132 |
Q |
| |
|
|||||||| ||||||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
6370575 |
ggattcacaccagcaatcatctgtcttgcaaattcctcatcagccatccatgca |
6370628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 78 - 134
Target Start/End: Complemental strand, 36744717 - 36744661
Alignment:
| Q |
78 |
tggattcaccccagcaatcatctcccttgcaaattcctcatcagtcatccatgcaga |
134 |
Q |
| |
|
|||||| || ||||||| ||| || ||||||||||| |||||||||||||||||||| |
|
|
| T |
36744717 |
tggatttacaccagcaagcatttctcttgcaaattcttcatcagtcatccatgcaga |
36744661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 88 - 134
Target Start/End: Complemental strand, 9604130 - 9604084
Alignment:
| Q |
88 |
ccagcaatcatctcccttgcaaattcctcatcagtcatccatgcaga |
134 |
Q |
| |
|
||||||| |||||| ||| ||||||| |||||||||||||||||||| |
|
|
| T |
9604130 |
ccagcaaccatctctcttccaaattcttcatcagtcatccatgcaga |
9604084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 42693651 - 42693707
Alignment:
| Q |
78 |
tggattcaccccagcaatcatctcccttgcaaattcctcatcagtcatccatgcaga |
134 |
Q |
| |
|
|||||| || ||||| | ||| || ||||||||||| |||||||||||||||||||| |
|
|
| T |
42693651 |
tggatttactccagctagcatttctcttgcaaattcttcatcagtcatccatgcaga |
42693707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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