View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4519-Insertion-5 (Length: 529)

Name: NF4519-Insertion-5
Description: NF4519
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4519-Insertion-5
NF4519-Insertion-5
[»] chr3 (25 HSPs)
chr3 (446-529)||(19659142-19659225)
chr3 (452-529)||(5348139-5348216)
chr3 (463-520)||(4657452-4657509)
chr3 (448-529)||(19631290-19631371)
chr3 (452-513)||(15044580-15044641)
chr3 (453-529)||(11832277-11832353)
chr3 (453-529)||(12252084-12252160)
chr3 (446-529)||(25660880-25660964)
chr3 (446-529)||(25667285-25667369)
chr3 (446-529)||(25673690-25673774)
chr3 (448-529)||(11829215-11829296)
chr3 (448-496)||(16218278-16218326)
chr3 (446-517)||(25680115-25680187)
chr3 (446-517)||(25688419-25688491)
chr3 (453-529)||(30104254-30104330)
chr3 (448-529)||(10935226-10935307)
chr3 (451-492)||(15540756-15540797)
chr3 (446-526)||(4161586-4161665)
chr3 (473-529)||(7770018-7770074)
chr3 (445-489)||(13440903-13440947)
chr3 (452-527)||(12695502-12695576)
chr3 (465-520)||(20421653-20421708)
chr3 (446-528)||(17394186-17394268)
chr3 (448-513)||(19431739-19431803)
chr3 (465-529)||(6224458-6224521)
[»] chr1 (9 HSPs)
chr1 (446-529)||(23475180-23475263)
chr1 (450-529)||(21721001-21721080)
chr1 (448-529)||(20408746-20408827)
chr1 (452-529)||(18621226-18621301)
chr1 (453-513)||(21424042-21424102)
chr1 (446-522)||(22615874-22615950)
chr1 (463-520)||(21981572-21981629)
chr1 (448-516)||(21403160-21403228)
chr1 (449-526)||(21682417-21682495)
[»] chr8 (13 HSPs)
chr8 (451-529)||(18829983-18830061)
chr8 (448-529)||(23539657-23539738)
chr8 (464-529)||(25281812-25281877)
chr8 (448-523)||(23543193-23543268)
chr8 (445-529)||(24625621-24625705)
chr8 (452-529)||(16090627-16090704)
chr8 (450-526)||(14392971-14393046)
chr8 (448-529)||(20496153-20496234)
chr8 (453-529)||(23241440-23241516)
chr8 (463-526)||(15887060-15887123)
chr8 (453-522)||(18829252-18829321)
chr8 (448-488)||(25264020-25264060)
chr8 (448-494)||(15929673-15929719)
[»] scaffold0228 (3 HSPs)
scaffold0228 (448-529)||(6316-6397)
scaffold0228 (448-529)||(13898-13979)
scaffold0228 (448-529)||(23850-23931)
[»] chr5 (14 HSPs)
chr5 (448-529)||(17170329-17170410)
chr5 (453-526)||(18223375-18223448)
chr5 (450-526)||(19315702-19315778)
chr5 (453-529)||(24516768-24516844)
chr5 (453-529)||(22826936-22827012)
chr5 (451-513)||(10176021-10176081)
chr5 (450-529)||(19858749-19858828)
chr5 (446-525)||(22446790-22446869)
chr5 (447-518)||(31480307-31480377)
chr5 (452-494)||(17364851-17364893)
chr5 (452-519)||(22053212-22053278)
chr5 (446-527)||(25243028-25243109)
chr5 (446-527)||(25307180-25307261)
chr5 (453-513)||(26260408-26260468)
[»] scaffold0111 (2 HSPs)
scaffold0111 (448-529)||(25296-25377)
scaffold0111 (446-494)||(29225-29273)
[»] scaffold0018 (1 HSPs)
scaffold0018 (452-529)||(61853-61930)
[»] chr6 (20 HSPs)
chr6 (448-529)||(16896798-16896879)
chr6 (445-529)||(13310656-13310739)
chr6 (453-529)||(14355784-14355860)
chr6 (446-520)||(13562477-13562551)
chr6 (452-529)||(14565892-14565969)
chr6 (448-529)||(18027827-18027908)
chr6 (446-529)||(19969028-19969109)
chr6 (451-529)||(19976592-19976670)
chr6 (453-529)||(18558147-18558223)
chr6 (466-520)||(14894554-14894608)
chr6 (468-527)||(4176997-4177055)
chr6 (463-502)||(10975683-10975722)
chr6 (448-529)||(14672253-14672334)
chr6 (465-529)||(15514654-15514716)
chr6 (456-528)||(5484119-5484191)
chr6 (454-513)||(9296635-9296693)
chr6 (446-484)||(23301340-23301378)
chr6 (483-519)||(19176066-19176102)
chr6 (477-517)||(19980966-19981006)
chr6 (451-499)||(22460308-22460356)
[»] scaffold0039 (1 HSPs)
scaffold0039 (446-529)||(8622-8705)
[»] chr7 (14 HSPs)
chr7 (446-529)||(11773285-11773368)
chr7 (448-529)||(13761022-13761103)
chr7 (445-513)||(18083286-18083354)
chr7 (449-529)||(3169557-3169637)
chr7 (448-529)||(16095583-16095664)
chr7 (448-496)||(16197719-16197767)
chr7 (449-529)||(29740550-29740629)
chr7 (445-529)||(17923286-17923370)
chr7 (448-492)||(8326472-8326516)
chr7 (445-529)||(19070667-19070750)
chr7 (448-529)||(5550-5630)
chr7 (449-494)||(13146672-13146717)
chr7 (481-529)||(4485525-4485573)
chr7 (446-502)||(17160102-17160157)
[»] scaffold0964 (1 HSPs)
scaffold0964 (445-529)||(2924-3008)
[»] chr2 (10 HSPs)
chr2 (452-520)||(20511080-20511148)
chr2 (448-528)||(18995999-18996079)
chr2 (448-520)||(24282382-24282453)
chr2 (448-529)||(28774992-28775072)
chr2 (463-529)||(19285332-19285397)
chr2 (452-526)||(24699272-24699346)
chr2 (480-529)||(19901698-19901747)
chr2 (446-526)||(24689915-24689995)
chr2 (446-529)||(21654964-21655047)
chr2 (446-496)||(21909410-21909460)
[»] scaffold0050 (1 HSPs)
scaffold0050 (450-529)||(77997-78076)
[»] scaffold0007 (1 HSPs)
scaffold0007 (446-513)||(204092-204159)
[»] chr4 (13 HSPs)
chr4 (448-529)||(16571919-16572000)
chr4 (450-529)||(21982714-21982793)
chr4 (453-529)||(28801555-28801630)
chr4 (451-529)||(9273388-9273466)
chr4 (452-494)||(11777004-11777046)
chr4 (445-502)||(16684900-16684957)
chr4 (448-529)||(15712175-15712258)
chr4 (451-526)||(9253420-9253495)
chr4 (453-520)||(9567330-9567397)
chr4 (452-529)||(9652752-9652827)
chr4 (446-511)||(23269250-23269315)
chr4 (470-502)||(6942864-6942896)
chr4 (473-529)||(12333994-12334050)
[»] scaffold0014 (1 HSPs)
scaffold0014 (450-529)||(202204-202282)
[»] scaffold0196 (1 HSPs)
scaffold0196 (449-529)||(17701-17780)
[»] scaffold0193 (1 HSPs)
scaffold0193 (453-529)||(19661-19737)
[»] scaffold0186 (1 HSPs)
scaffold0186 (454-529)||(19822-19897)
[»] scaffold0004 (1 HSPs)
scaffold0004 (446-529)||(370687-370770)
[»] scaffold0112 (1 HSPs)
scaffold0112 (465-529)||(13967-14031)
[»] scaffold0040 (1 HSPs)
scaffold0040 (446-502)||(42367-42423)
[»] scaffold0205 (1 HSPs)
scaffold0205 (453-515)||(8755-8817)
[»] scaffold0772 (1 HSPs)
scaffold0772 (452-529)||(2111-2187)
[»] scaffold0001 (2 HSPs)
scaffold0001 (448-496)||(151223-151271)
scaffold0001 (452-494)||(155616-155658)
[»] scaffold0020 (1 HSPs)
scaffold0020 (454-496)||(109106-109148)
[»] scaffold0305 (1 HSPs)
scaffold0305 (484-529)||(10303-10348)
[»] scaffold0183 (1 HSPs)
scaffold0183 (468-529)||(11826-11886)
[»] scaffold0058 (1 HSPs)
scaffold0058 (449-529)||(73550-73628)
[»] scaffold0013 (1 HSPs)
scaffold0013 (445-529)||(6439-6523)
[»] scaffold0331 (1 HSPs)
scaffold0331 (481-529)||(5200-5248)
[»] scaffold0233 (1 HSPs)
scaffold0233 (452-496)||(16449-16493)


Alignment Details
Target: chr3 (Bit Score: 64; Significance: 1e-27; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 446 - 529
Target Start/End: Original strand, 19659142 - 19659225
Alignment:
Q  446 agcccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||| ||||||||    
T  19659142 agcccgtttttcgctagaattattttaattatttattatgtgtgtttatatgtgcttttgtgtgattaattgtctatgtgtgta 19659225  T

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Target: chr3; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 452 - 529
Target Start/End: Complemental strand, 5348216 - 5348139
Alignment:
Q  452 tttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    |||||||||| |||||||||||||||||||||||||||||||||| | ||| ||| ||||||||||||| ||||||||    
T  5348216 tttttcgctagaattattttaattatttattatgtgtgtttatatgtacttgtatatgattaattgtctatgtgtgta 5348139  T

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Target: chr3; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 463 - 520
Target Start/End: Complemental strand, 4657509 - 4657452
Alignment:
Q  463 aattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtct 520  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  4657509 aattattttaattatttattatgtgtgtttatatgtgcttgtatgtgattaattgtct 4657452  T

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Target: chr3; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 448 - 529
Target Start/End: Original strand, 19631290 - 19631371
Alignment:
Q  448 cccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    ||||||||| |||| |||| ||||| ||||||||||||||||||||||| ||||| | ||||||||||||||| ||||||||    
T  19631290 cccgttttttgctagaattgttttatttatttattatgtgtgtttatatgtgcttgtgtgtgattaattgtctctgtgtgta 19631371  T

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Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 452 - 513
Target Start/End: Original strand, 15044580 - 15044641
Alignment:
Q  452 tttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgatta 513  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||| ||||  ||||||||||    
T  15044580 ttttttgctataattattttaattatttattatatgtgtttatatgtgctcgtatgtgatta 15044641  T

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Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 453 - 529
Target Start/End: Original strand, 11832277 - 11832353
Alignment:
Q  453 ttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    ||||||||| |||||||||||||| || |||||| ||||||||| ||||| |||||||||| |||||| | ||||||    
T  11832277 ttttcgctagaattattttaattaatttttatgtatgtttatatgtgcttgtatgtgattatttgtctctatgtgta 11832353  T

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Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 453 - 529
Target Start/End: Original strand, 12252084 - 12252160
Alignment:
Q  453 ttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    ||||||||| |||||||||||||| |||||||||||||| |||| ||||| |||| ||||| |||||| | ||||||    
T  12252084 ttttcgctagaattattttaattaattattatgtgtgttcatatgtgcttgtatgcgattatttgtctctatgtgta 12252160  T

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Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 446 - 529
Target Start/End: Original strand, 25660880 - 25660964
Alignment:
Q  446 agcccgtttttcgctataatta-ttttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    |||||||||||||||| ||||| ||||| ||| ||||||||| ||||||||| ||||| |||||| ||||||| || ||||||||    
T  25660880 agcccgtttttcgctagaattatttttatttaattattatgtatgtttatatgtgcttgtatgtgcttaattgcctctgtgtgta 25660964  T

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Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 446 - 529
Target Start/End: Original strand, 25667285 - 25667369
Alignment:
Q  446 agcccgtttttcgctataatta-ttttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    |||||||||||||||| ||||| ||||| ||| ||||||||| ||||||||| ||||| |||||| ||||||| || ||||||||    
T  25667285 agcccgtttttcgctagaattatttttatttaattattatgtatgtttatatgtgcttgtatgtgcttaattgcctctgtgtgta 25667369  T

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Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 446 - 529
Target Start/End: Original strand, 25673690 - 25673774
Alignment:
Q  446 agcccgtttttcgctataatta-ttttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    |||||||||||||||| ||||| ||||| ||| ||||||||| ||||||||| ||||| |||||| ||||||| || ||||||||    
T  25673690 agcccgtttttcgctagaattatttttatttaattattatgtatgtttatatgtgcttgtatgtgcttaattgcctctgtgtgta 25673774  T

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Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 448 - 529
Target Start/End: Complemental strand, 11829296 - 11829215
Alignment:
Q  448 cccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    |||| ||||||||| | ||| ||| |||| ||||||||||||||||||||| ||| |||||||||| || ||| ||||||||    
T  11829296 cccgattttcgctagatttacttttattaattattatgtgtgtttatatattcttgtatgtgattatttatctctgtgtgta 11829215  T

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Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 448 - 496
Target Start/End: Original strand, 16218278 - 16218326
Alignment:
Q  448 cccgtttttcgctataattattttaattatttattatgtgtgtttatat 496  Q
    |||||||||||||| || |||||||||||||||||||||||||| ||||    
T  16218278 cccgtttttcgctagaaatattttaattatttattatgtgtgttgatat 16218326  T

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Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 446 - 517
Target Start/End: Original strand, 25680115 - 25680187
Alignment:
Q  446 agcccgtttttcgctataatta-ttttaattatttattatgtgtgtttatatatgcttctatgtgattaattg 517  Q
    |||||||||||||||| ||||| ||||| ||| ||||||||| ||||||||| ||||| |||||| |||||||    
T  25680115 agcccgtttttcgctagaattatttttatttaattattatgtatgtttatatgtgcttgtatgtgcttaattg 25680187  T

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Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 446 - 517
Target Start/End: Original strand, 25688419 - 25688491
Alignment:
Q  446 agcccgtttttcgctataatta-ttttaattatttattatgtgtgtttatatatgcttctatgtgattaattg 517  Q
    |||||||||||||||| ||||| ||||| ||| ||||||||| ||||||||| ||||| |||||| |||||||    
T  25688419 agcccgtttttcgctagaattatttttatttaattattatgtatgtttatatgtgcttgtatgtgcttaattg 25688491  T

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Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 453 - 529
Target Start/End: Original strand, 30104254 - 30104330
Alignment:
Q  453 ttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    |||| |||| |||||||||||||| | ||||||||||||||||| || || ||||||||||  ||| ||||||||||    
T  30104254 tttttgctagaattattttaattaatgattatgtgtgtttatatgtgtttgtatgtgattatctgtttttgtgtgta 30104330  T

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Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 448 - 529
Target Start/End: Complemental strand, 10935307 - 10935226
Alignment:
Q  448 cccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    ||||||||| |||| | |||||||||||| |||||| ||||||| |||| || || | |||||||| ||| |||||||||||    
T  10935307 cccgttttttgctagatttattttaattaattattaagtgtgttaatatgtgtttatgtgtgattatttgcctttgtgtgta 10935226  T

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Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 451 - 492
Target Start/End: Complemental strand, 15540797 - 15540756
Alignment:
Q  451 gtttttcgctataattattttaattatttattatgtgtgttt 492  Q
    ||||||| ||| ||||||||||||||||||||||||||||||    
T  15540797 gtttttcactaaaattattttaattatttattatgtgtgttt 15540756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 446 - 526
Target Start/End: Original strand, 4161586 - 4161665
Alignment:
Q  446 agcccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgt 526  Q
    |||||| ||||||||| | ||||||||||| ||| | || ||||||| ||||||||| |||||||||||||| || |||||    
T  4161586 agcccgattttcgctagatttattttaattgttt-taatatgtgtttttatatgcttttatgtgattaattgcctctgtgt 4161665  T

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Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 473 - 529
Target Start/End: Original strand, 7770018 - 7770074
Alignment:
Q  473 attatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    |||||||||||||||||||| ||| ||||| ||||||||| ||||||| || |||||    
T  7770018 attatttattatgtgtgtttgtatgtgcttgtatgtgatttattgtctctgcgtgta 7770074  T

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Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 489
Target Start/End: Complemental strand, 13440947 - 13440903
Alignment:
Q  445 tagcccgtttttcgctataattattttaattatttattatgtgtg 489  Q
    ||||||||||||||||| ||| |||||||||||||||||| ||||    
T  13440947 tagcccgtttttcgctagaatcattttaattatttattatatgtg 13440903  T

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Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 452 - 527
Target Start/End: Original strand, 12695502 - 12695576
Alignment:
Q  452 tttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtg 527  Q
    |||||||||| ||||||||||||||| | |||| |||||| |||| |||||  |||||||| ||||||| ||||||    
T  12695502 tttttcgctagaattattttaattatctcttatatgtgttgatatgtgcttgcatgtgatt-attgtctctgtgtg 12695576  T

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Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 465 - 520
Target Start/End: Complemental strand, 20421708 - 20421653
Alignment:
Q  465 ttattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtct 520  Q
    |||||||||||| || |||| ||||||||||| ||||| || ||||||||||||||    
T  20421708 ttattttaattaatttttatatgtgtttatatgtgcttgtacgtgattaattgtct 20421653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 528
Target Start/End: Complemental strand, 17394268 - 17394186
Alignment:
Q  446 agcccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgt 528  Q
    |||||| |||||| || | ||||||| ||| ||||||||  |||||||||||||||| | |||||||| ||| || |||||||    
T  17394268 agcccgattttcgttaaatttatttttattttttattataagtgtttatatatgcttgtgtgtgattatttgcctatgtgtgt 17394186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 448 - 513
Target Start/End: Complemental strand, 19431803 - 19431739
Alignment:
Q  448 cccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgatta 513  Q
    |||||||||||||| | |||||||||||| || || | ||||||||||| ||||| ||||||||||    
T  19431803 cccgtttttcgctagatttattttaattaatt-ttttatgtgtttatatgtgcttgtatgtgatta 19431739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 465 - 529
Target Start/End: Original strand, 6224458 - 6224521
Alignment:
Q  465 ttattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    ||||||||||| ||| | || ||||||| ||||||||| |||||||||||||| || ||||||||    
T  6224458 ttattttaattgttt-taatatgtgtttttatatgcttttatgtgattaattgcctctgtgtgta 6224521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 2e-25; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 446 - 529
Target Start/End: Original strand, 23475180 - 23475263
Alignment:
Q  446 agcccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    ||||| |||||||||| ||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||| ||||||||    
T  23475180 agcccatttttcgctagaattattttaattatttattatgtgtgattatatgtgcttgtatgtgattaattgtctctgtgtgta 23475263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 450 - 529
Target Start/End: Complemental strand, 21721080 - 21721001
Alignment:
Q  450 cgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    |||||||||||| ||| | |||||||||||||||||||||||||||| ||||  ||||||||||||||||| ||||||||    
T  21721080 cgtttttcgctagaatcactttaattatttattatgtgtgtttatatgtgctcgtatgtgattaattgtctctgtgtgta 21721001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 448 - 529
Target Start/End: Complemental strand, 20408827 - 20408746
Alignment:
Q  448 cccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| |  || | |||||||| |||||| ||||||||    
T  20408827 cccgtttttcgctataattattttaattacttattatgtgtgtttatatgtttttgtgtgtgattatttgtctatgtgtgta 20408746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 452 - 529
Target Start/End: Original strand, 18621226 - 18621301
Alignment:
Q  452 tttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    |||||||||| |||| |||  |||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||    
T  18621226 tttttcgctagaatttttt--attatttattatgtgtgtttatatgtgcttgtatgtgattaattgtctctgtgtgta 18621301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 453 - 513
Target Start/End: Complemental strand, 21424102 - 21424042
Alignment:
Q  453 ttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgatta 513  Q
    ||||||||| |||||||||||||| ||||||||||||||||||| ||||| ||||||||||    
T  21424102 ttttcgctagaattattttaattaattattatgtgtgtttatatgtgcttgtatgtgatta 21424042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 446 - 522
Target Start/End: Complemental strand, 22615950 - 22615874
Alignment:
Q  446 agcccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtcttt 522  Q
    ||||||||||||||||||  | |||||||||||||||||||||||||||||  |||| |||||||||| || |||||    
T  22615950 agcccgtttttcgctatagatgttttaattatttattatgtgtgtttatatgcgcttgtatgtgattatttatcttt 22615874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 463 - 520
Target Start/End: Complemental strand, 21981629 - 21981572
Alignment:
Q  463 aattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtct 520  Q
    |||||||||||||| |||||||||||||| |||| ||||| |||||||||| ||||||    
T  21981629 aattattttaattaattattatgtgtgttcatatgtgcttgtatgtgattatttgtct 21981572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 448 - 516
Target Start/End: Complemental strand, 21403228 - 21403160
Alignment:
Q  448 cccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaatt 516  Q
    |||||||||  ||| ||||||||||||||||||||||||||||||||   | ||| |||||||||||||    
T  21403228 cccgttttttactagaattattttaattatttattatgtgtgtttattggttcttgtatgtgattaatt 21403160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 449 - 526
Target Start/End: Complemental strand, 21682495 - 21682417
Alignment:
Q  449 ccgtttttcgctataattatttt-aattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgt 526  Q
    ||||||||||||| ||||||||| |||||||  ||||||| |||||||| || || |  ||||||||||||||||||||    
T  21682495 ccgtttttcgctagaattattttgaattattgcttatgtgcgtttatatgtgtttatgcgtgattaattgtctttgtgt 21682417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 9e-25; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 451 - 529
Target Start/End: Original strand, 18829983 - 18830061
Alignment:
Q  451 gtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||| ||||||||    
T  18829983 gtttttcgctataattattttaattatttattatgtgtatttatatgtgcttgtatgtaattaattgtctctgtgtgta 18830061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 448 - 529
Target Start/End: Original strand, 23539657 - 23539738
Alignment:
Q  448 cccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||| || ||| ||||||||    
T  23539657 cccgtttttcgctataattattttaattatttattatgtgtgtttatatgcgcttgtatgtgattatttatctatgtgtgta 23539738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 464 - 529
Target Start/End: Complemental strand, 25281877 - 25281812
Alignment:
Q  464 attattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  25281877 attattttaattatttattatgtgtgtttatatgtgcttgtatgtgattaattgtctttgtgtgta 25281812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 448 - 523
Target Start/End: Complemental strand, 23543268 - 23543193
Alignment:
Q  448 cccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttg 523  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||    
T  23543268 cccgttttttgctagaattattttaattatttattatgtgtgtttatatgtgcttatatatgattaattgtctttg 23543193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 445 - 529
Target Start/End: Complemental strand, 24625705 - 24625621
Alignment:
Q  445 tagcccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    ||||||| ||||||||| |||||||||| ||||||||||| ||||||||||| ||||| |||||||||| |||||| ||||||||    
T  24625705 tagcccgattttcgctagaattattttatttatttattatatgtgtttatatgtgcttgtatgtgattatttgtctctgtgtgta 24625621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 452 - 529
Target Start/End: Original strand, 16090627 - 16090704
Alignment:
Q  452 tttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    |||||||||| |||||||||||||||||||||||||||| |||||  ||||   ||||||||||||||||||||||||    
T  16090627 tttttcgctagaattattttaattatttattatgtgtgtctatatgcgcttgcgtgtgattaattgtctttgtgtgta 16090704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 450 - 526
Target Start/End: Original strand, 14392971 - 14393046
Alignment:
Q  450 cgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgt 526  Q
    |||||||||||| | |||||||||||||||||||| ||||||||| |||||||  |||||||||||||||| |||||    
T  14392971 cgtttttcgctagatttattttaattatttattatatgtgtttat-tatgcttgcatgtgattaattgtctgtgtgt 14393046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 448 - 529
Target Start/End: Original strand, 20496153 - 20496234
Alignment:
Q  448 cccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    |||| ||||||||| |||||||||||||| ||||||||||||||||| | ||||| | | ||||||||||||| ||| ||||    
T  20496153 cccgattttcgctagaattattttaattaattattatgtgtgtttatttgtgcttgtgtatgattaattgtctctgtatgta 20496234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 453 - 529
Target Start/End: Original strand, 23241440 - 23241516
Alignment:
Q  453 ttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    |||| |||| |||||||||| ||||||||||||||| |||| || ||||| | ||||||||||||||||||| ||||    
T  23241440 ttttggctaaaattattttatttatttattatgtgtatttacatgtgcttgtgtgtgattaattgtctttgtttgta 23241516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 463 - 526
Target Start/End: Complemental strand, 15887123 - 15887060
Alignment:
Q  463 aattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgt 526  Q
    ||||||||||||||||||||||| ||||||||||   ||| ||||||||||||||||| |||||    
T  15887123 aattattttaattatttattatgcgtgtttatatgcacttgtatgtgattaattgtctctgtgt 15887060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 453 - 522
Target Start/End: Complemental strand, 18829321 - 18829252
Alignment:
Q  453 ttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtcttt 522  Q
    ||||| ||| |||||||||||||||||| | |||| |||||||| |||||||||||| ||| || |||||    
T  18829321 ttttctctagaattattttaattatttagtgtgtgcgtttatatgtgcttctatgtggttatttatcttt 18829252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 448 - 488
Target Start/End: Complemental strand, 25264060 - 25264020
Alignment:
Q  448 cccgtttttcgctataattattttaattatttattatgtgt 488  Q
    ||||||||||| || ||||||||||||||||||||||||||    
T  25264060 cccgtttttcgatagaattattttaattatttattatgtgt 25264020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 494
Target Start/End: Complemental strand, 15929719 - 15929673
Alignment:
Q  448 cccgtttttcgctataattattttaattatttattatgtgtgtttat 494  Q
    |||||||||||||| |||||||||| ||||||||||| | |||||||    
T  15929719 cccgtttttcgctaaaattattttatttatttattatatttgtttat 15929673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 58; Significance: 4e-24; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 448 - 529
Target Start/End: Original strand, 6316 - 6397
Alignment:
Q  448 cccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||| ||||||||    
T  6316 cccgattttcgctagaattattttaattatttattatgtgtgtttatatgtgcttgtatgtgattatttgtctctgtgtgta 6397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 448 - 529
Target Start/End: Original strand, 13898 - 13979
Alignment:
Q  448 cccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||| ||||||||    
T  13898 cccgattttcgctagaattattttaattatttattatgtgtgtttatatgtgcttgtatgtgattatttgtctctgtgtgta 13979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 448 - 529
Target Start/End: Original strand, 23850 - 23931
Alignment:
Q  448 cccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||| ||||||||    
T  23850 cccgattttcgctagaattattttaattatttattatgtgtgtttatatgtgcttgtatgtgattatttgtctctgtgtgta 23931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 4e-24; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 448 - 529
Target Start/End: Complemental strand, 17170410 - 17170329
Alignment:
Q  448 cccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||| ||||||||    
T  17170410 cccgtttttctctacaattattttaattatttattatgtgtgtttatatgcgcttgtatgtgattaattgtctctgtgtgta 17170329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 453 - 526
Target Start/End: Original strand, 18223375 - 18223448
Alignment:
Q  453 ttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgt 526  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||| |||| |||||||| | |||||||    
T  18223375 ttttcgctagaattattttaattatttattatgtgtgtttatatgtgcttgtatgcgattaattatatttgtgt 18223448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 450 - 526
Target Start/End: Original strand, 19315702 - 19315778
Alignment:
Q  450 cgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgt 526  Q
    ||||||||  ||||||||||||||||||| ||||||||||||||||| ||||| |||||||||| |||||| |||||    
T  19315702 cgtttttcaatataattattttaattattcattatgtgtgtttatatgtgcttgtatgtgattatttgtctctgtgt 19315778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 453 - 529
Target Start/End: Complemental strand, 24516844 - 24516768
Alignment:
Q  453 ttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    |||| |||| |||||||||||||| |||||||||| |||||||| ||||| ||||||||||||||||| ||||||||    
T  24516844 tttttgctaaaattattttaattaattattatgtgcgtttatatgtgcttgtatgtgattaattgtctctgtgtgta 24516768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 453 - 529
Target Start/End: Original strand, 22826936 - 22827012
Alignment:
Q  453 ttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    |||| |||| |||||||||||||| ||||||||||||| ||||| | ||| |||||||||| | |||| ||||||||    
T  22826936 tttttgctagaattattttaattaattattatgtgtgtctatatgttcttgtatgtgattattcgtctctgtgtgta 22827012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 451 - 513
Target Start/End: Original strand, 10176021 - 10176081
Alignment:
Q  451 gtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgatta 513  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||| || || ||||||||||    
T  10176021 gtttttcgctagaattattttaattatttatta--tgtgtttatatgtgtttgtatgtgatta 10176081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 450 - 529
Target Start/End: Original strand, 19858749 - 19858828
Alignment:
Q  450 cgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    ||||||||| || ||||||| ||||||||||||||||||| ||||||   ||| | |||||||| |||||| ||||||||    
T  19858749 cgtttttcgttagaattattctaattatttattatgtgtggttatatgctcttgtgtgtgattatttgtctctgtgtgta 19858828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 525
Target Start/End: Complemental strand, 22446869 - 22446790
Alignment:
Q  446 agcccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtg 525  Q
    |||||| ||||||||| |||||||||| ||| ||||||||||||||||||| ||  | |||||||||  |||||| ||||    
T  22446869 agcccgattttcgctagaattattttatttaattattatgtgtgtttatatgtgtgtgtatgtgattgtttgtctatgtg 22446790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 447 - 518
Target Start/End: Complemental strand, 31480377 - 31480307
Alignment:
Q  447 gcccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgt 518  Q
    ||||| ||||||||| |||||||||||||||  ||||||||||||||||| ||||| ||| |||||| ||||    
T  31480377 gcccgattttcgctagaattattttaattatc-attatgtgtgtttatatgtgcttgtatatgattatttgt 31480307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 452 - 494
Target Start/End: Complemental strand, 17364893 - 17364851
Alignment:
Q  452 tttttcgctataattattttaattatttattatgtgtgtttat 494  Q
    ||||| |||| |||||||||||||||||||||| |||||||||    
T  17364893 tttttagctagaattattttaattatttattatatgtgtttat 17364851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 452 - 519
Target Start/End: Original strand, 22053212 - 22053278
Alignment:
Q  452 tttttcgctataattattttaatta-tttattatgtgtgtttatatatgcttctatgtgattaattgtc 519  Q
    |||||||||||| |||||||||||  ||||||| ||||  |||||| |||| |||||||||||||||||    
T  22053212 tttttcgctatatttattttaattgctttattacgtgt--ttatatgtgctcctatgtgattaattgtc 22053278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 527
Target Start/End: Original strand, 25243028 - 25243109
Alignment:
Q  446 agcccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtg 527  Q
    |||| |||||| |||| ||||||||||| |||||||||| ||||||||| | || ||  ||||| ||| || ||||||||||    
T  25243028 agcctgtttttagctagaattattttaactatttattatatgtgtttatgtgtgtttacatgtgcttatttttctttgtgtg 25243109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 527
Target Start/End: Original strand, 25307180 - 25307261
Alignment:
Q  446 agcccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtg 527  Q
    |||| |||||| |||| ||||||||||| |||||||||| ||||||||| | || ||  ||||| ||| || ||||||||||    
T  25307180 agcctgtttttagctagaattattttaactatttattatatgtgtttatgtgtgtttacatgtgcttatttttctttgtgtg 25307261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 453 - 513
Target Start/End: Original strand, 26260408 - 26260468
Alignment:
Q  453 ttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgatta 513  Q
    ||||||||| | ||||||| |||| ||||||||||||| | ||||||||| | ||||||||    
T  26260408 ttttcgctagatttatttttattaattattatgtgtgtatttatatgcttgtgtgtgatta 26260468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 54; Significance: 9e-22; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 448 - 529
Target Start/End: Complemental strand, 25377 - 25296
Alignment:
Q  448 cccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    |||| ||||| ||| |||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||| ||||||||    
T  25377 cccgattttcactagaattattttaattatttattatgtgtttttatatgtgcttgtatgtgattaattgtctgtgtgtgta 25296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 446 - 494
Target Start/End: Original strand, 29225 - 29273
Alignment:
Q  446 agcccgtttttcgctataattattttaattatttattatgtgtgtttat 494  Q
    |||| |||||| ||||||||||||||||||||||||||| |||||||||    
T  29225 agcctgttttttgctataattattttaattatttattatatgtgtttat 29273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 54; Significance: 9e-22; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 452 - 529
Target Start/End: Complemental strand, 61930 - 61853
Alignment:
Q  452 tttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    |||||||||| |||||||||||||||||||||||||||| ||||| || || ||||||||||||||||| ||||||||    
T  61930 tttttcgctagaattattttaattatttattatgtgtgtctatatttgtttatatgtgattaattgtctctgtgtgta 61853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 9e-22; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 448 - 529
Target Start/End: Complemental strand, 16896879 - 16896798
Alignment:
Q  448 cccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    ||||||||| | || |||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||| ||||||||    
T  16896879 cccgttttttgttagaattattttaattatttattatgtgtgtttatatgtgcttgtatgtgatgaattgtctctgtgtgta 16896798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 445 - 529
Target Start/End: Complemental strand, 13310739 - 13310656
Alignment:
Q  445 tagcccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    ||||||| ||||||||| | |||||||| ||||||||||||||| ||||| | ||||||||||| ||||||||||||||||||||    
T  13310739 tagcccgattttcgctagatttatttta-ttatttattatgtgtatttatgtgtgcttctatgtaattaattgtctttgtgtgta 13310656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 453 - 529
Target Start/End: Complemental strand, 14355860 - 14355784
Alignment:
Q  453 ttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||| | ||||||| |||| || ||||||||    
T  14355860 ttttcgctaaaattattttaattatttattatgtgtgtttatatgtgcttgtgtgtgattgattgcctctgtgtgta 14355784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 446 - 520
Target Start/End: Original strand, 13562477 - 13562551
Alignment:
Q  446 agcccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtct 520  Q
    |||||||||||||||| ||||||||||| |||||||||| |||||||||||  |||| | |||||||||||||||    
T  13562477 agcccgtttttcgctaaaattattttaaatatttattatatgtgtttatattcgcttgtgtgtgattaattgtct 13562551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 452 - 529
Target Start/End: Original strand, 14565892 - 14565969
Alignment:
Q  452 tttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    ||||||| || | |||||||||||||||||||||||||||||||| |  || | ||||||||||||||||||||||||    
T  14565892 tttttcgttagatttattttaattatttattatgtgtgtttatatgtttttatgtgtgattaattgtctttgtgtgta 14565969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 448 - 529
Target Start/End: Original strand, 18027827 - 18027908
Alignment:
Q  448 cccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    ||||||||| | || |||||||||||||||||||||||||||||||||| ||||| | |||||||| || ||| ||||||||    
T  18027827 cccgttttttgatagaattattttaattatttattatgtgtgtttatatgtgcttgtgtgtgattatttatctctgtgtgta 18027908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 446 - 529
Target Start/End: Original strand, 19969028 - 19969109
Alignment:
Q  446 agcccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    |||| ||||||||||||||||||||||||||||||  |||||||||| ||| ||||| || ||||||||||| |||||| ||||    
T  19969028 agcctgtttttcgctataattattttaattattta--atgtgtgtttttatgtgcttgtaagtgattaattgcctttgtatgta 19969109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 451 - 529
Target Start/End: Original strand, 19976592 - 19976670
Alignment:
Q  451 gtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    ||||||| ||| |||||||||| ||||||||||| ||||||||||| ||||| | |||||||| ||| |||||||||||    
T  19976592 gtttttctctagaattattttagttatttattatatgtgtttatatgtgcttttgtgtgattatttgcctttgtgtgta 19976670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 453 - 529
Target Start/End: Complemental strand, 18558223 - 18558147
Alignment:
Q  453 ttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    |||||| || |||||||||||||| ||||||||| ||||||||| ||||| |||||| ||| |||||| ||||||||    
T  18558223 ttttcgttagaattattttaattaattattatgtatgtttatatgtgcttgtatgtgtttatttgtctatgtgtgta 18558147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 466 - 520
Target Start/End: Complemental strand, 14894608 - 14894554
Alignment:
Q  466 tattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtct 520  Q
    ||||||||||||||||||||||||||||||| ||||| ||| |||||| ||||||    
T  14894608 tattttaattatttattatgtgtgtttatatgtgcttgtatatgattatttgtct 14894554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 468 - 527
Target Start/End: Original strand, 4176997 - 4177055
Alignment:
Q  468 ttttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtg 527  Q
    |||||||| ||| |||||||||||||||||||||  |||||||||| |||||||||||||    
T  4176997 ttttaattgttt-ttatgtgtgtttatatatgctcatatgtgattatttgtctttgtgtg 4177055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 463 - 502
Target Start/End: Complemental strand, 10975722 - 10975683
Alignment:
Q  463 aattattttaattatttattatgtgtgtttatatatgctt 502  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  10975722 aattattttaattaattattatgtgtgtttatatatgctt 10975683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 448 - 529
Target Start/End: Complemental strand, 14672334 - 14672253
Alignment:
Q  448 cccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    |||| |||||| || | |||||||||||| || |||| ||| ||||||| ||||| |||||||||||||| || ||||||||    
T  14672334 cccgattttcgttagatttattttaattaatttttatatgtatttatatgtgcttgtatgtgattaattgcctctgtgtgta 14672253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 465 - 529
Target Start/End: Original strand, 15514654 - 15514716
Alignment:
Q  465 ttattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    |||||||||||| || |||||||  ||||||||||||| |||||||||||||| || ||||||||    
T  15514654 ttattttaattaatttttatgtg--tttatatatgcttgtatgtgattaattgcctctgtgtgta 15514716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 456 - 528
Target Start/End: Original strand, 5484119 - 5484191
Alignment:
Q  456 tcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgt 528  Q
    |||||| ||||||| |||||||||||||||  ||||||| | || || |||||||||| |||||| |||||||    
T  5484119 tcgctagaattattctaattatttattatgcatgtttatgtgtgtttgtatgtgattagttgtctctgtgtgt 5484191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 454 - 513
Target Start/End: Complemental strand, 9296693 - 9296635
Alignment:
Q  454 tttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgatta 513  Q
    |||||||| | |||||||| ||||||||||||||| ||||||| ||||| ||||||||||    
T  9296693 tttcgctagatttatttta-ttatttattatgtgtatttatatgtgcttgtatgtgatta 9296635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 484
Target Start/End: Complemental strand, 23301378 - 23301340
Alignment:
Q  446 agcccgtttttcgctataattattttaattatttattat 484  Q
    |||||||||||||||| |||||||||| |||||||||||    
T  23301378 agcccgtttttcgctagaattattttatttatttattat 23301340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 483 - 519
Target Start/End: Complemental strand, 19176102 - 19176066
Alignment:
Q  483 atgtgtgtttatatatgcttctatgtgattaattgtc 519  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  19176102 atgtgtgtttatttatgcttgtatgtgattaattgtc 19176066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 477 - 517
Target Start/End: Complemental strand, 19981006 - 19980966
Alignment:
Q  477 tttattatgtgtgtttatatatgcttctatgtgattaattg 517  Q
    |||||||||||||||| ||||||||| | ||||||||||||    
T  19981006 tttattatgtgtgtttgtatatgcttatgtgtgattaattg 19980966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 451 - 499
Target Start/End: Complemental strand, 22460356 - 22460308
Alignment:
Q  451 gtttttcgctataattattttaattatttattatgtgtgtttatatatg 499  Q
    ||||||||||| |||||||||| ||||| ||||| ||||||||| ||||    
T  22460356 gtttttcgctagaattattttatttattaattatatgtgtttatctatg 22460308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 446 - 529
Target Start/End: Complemental strand, 8705 - 8622
Alignment:
Q  446 agcccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    |||| |||||| |||| |||||||||||||||||||||||||||||||||| ||||| |||||||||| | |||| ||||||||    
T  8705 agcctgttttttgctagaattattttaattatttattatgtgtgtttatatgtgcttgtatgtgattactcgtctctgtgtgta 8622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 1e-20; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 446 - 529
Target Start/End: Original strand, 11773285 - 11773368
Alignment:
Q  446 agcccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||| ||||| | ||||| || |||||| ||||||||    
T  11773285 agcccgtttttcgttaaaattattttaattatttattatgtgtgtttatatgtgcttgtgtgtgactatttgtctctgtgtgta 11773368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 448 - 529
Target Start/End: Original strand, 13761022 - 13761103
Alignment:
Q  448 cccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    |||||||||||||  |||||||||||||||||||||||||| ||||||| | ||| |||||||||| |||||| ||||||||    
T  13761022 cccgtttttcgctggaattattttaattatttattatgtgtatttatatgtacttgtatgtgattatttgtctatgtgtgta 13761103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 445 - 513
Target Start/End: Complemental strand, 18083354 - 18083286
Alignment:
Q  445 tagcccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgatta 513  Q
    ||||||||||||| | | |||||||||||||||||||||| ||||||||||| ||||| ||||||||||    
T  18083354 tagcccgtttttcccgagaattattttaattatttattatatgtgtttatatgtgcttgtatgtgatta 18083286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 449 - 529
Target Start/End: Original strand, 3169557 - 3169637
Alignment:
Q  449 ccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||| |  ||  ||||||| | || ||||||||||||    
T  3169557 ccgtttttcgctagaattattttaaatatttattatgtgtgtttatatgttgttgcatgtgatcatttatctttgtgtgta 3169637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 448 - 529
Target Start/End: Complemental strand, 16095664 - 16095583
Alignment:
Q  448 cccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    ||||||||| |||| ||||||||||||||||  |||||||||||||||| || || | |||  ||| |||||||||||||||    
T  16095664 cccgtttttagctagaattattttaattattatttatgtgtgtttatatgtgtttgtttgtacttagttgtctttgtgtgta 16095583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 448 - 496
Target Start/End: Complemental strand, 16197767 - 16197719
Alignment:
Q  448 cccgtttttcgctataattattttaattatttattatgtgtgtttatat 496  Q
    ||||||||||| || |||||||||||||||||||||| |||||||||||    
T  16197767 cccgtttttcgttagaattattttaattatttattatatgtgtttatat 16197719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 449 - 529
Target Start/End: Original strand, 29740550 - 29740629
Alignment:
Q  449 ccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    |||||||||| || ||||||||||||| | ||||||||||| |||||| || || |||||||||| |||||| ||||||||    
T  29740550 ccgtttttcgttagaattattttaattgtctattatgtgtgcttatatgtg-ttttatgtgattatttgtctatgtgtgta 29740629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 445 - 529
Target Start/End: Complemental strand, 17923370 - 17923286
Alignment:
Q  445 tagcccgtttttcgctataatta-ttttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    ||||||| ||||||||| | ||| |||||||| ||| | |||||||||||| ||||||  ||||||||||||||||| ||||||||    
T  17923370 tagcccgattttcgctagatttaattttaattgttt-taatgtgtgtttatttatgctcgtatgtgattaattgtctatgtgtgta 17923286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 448 - 492
Target Start/End: Original strand, 8326472 - 8326516
Alignment:
Q  448 cccgtttttcgctataattattttaattatttattatgtgtgttt 492  Q
    |||||||||||||| ||||||||| ||||||||||||| ||||||    
T  8326472 cccgtttttcgctagaattattttcattatttattatgagtgttt 8326516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 529
Target Start/End: Complemental strand, 19070750 - 19070667
Alignment:
Q  445 tagcccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    ||||||| |||||| || | ||||||||||| ||| |||||||||||||| ||||||  |||||||||  |||||| ||||||||    
T  19070750 tagcccgattttcgttagatttattttaattgttt-ttatgtgtgtttatttatgctcgtatgtgattgtttgtctatgtgtgta 19070667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 448 - 529
Target Start/End: Complemental strand, 5630 - 5550
Alignment:
Q  448 cccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    |||| ||| ||||| | |||||||| ||||||||||||||||||||| || ||||  ||||||||| ||| || ||||||||    
T  5630 cccgatttacgctagatttatttta-ttatttattatgtgtgtttatttaagcttgcatgtgattatttgcctctgtgtgta 5550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 494
Target Start/End: Complemental strand, 13146717 - 13146672
Alignment:
Q  449 ccgtttttcgctataattattttaattatttattatgtgtgtttat 494  Q
    |||||||| | || |||||||||||||||||||||| |||||||||    
T  13146717 ccgttttttgatagaattattttaattatttattatatgtgtttat 13146672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 481 - 529
Target Start/End: Complemental strand, 4485573 - 4485525
Alignment:
Q  481 ttatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    |||| ||||||| ||||||||| |||||||||||||| || ||||||||    
T  4485573 ttatatgtgtttttatatgcttttatgtgattaattgcctctgtgtgta 4485525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 446 - 502
Target Start/End: Original strand, 17160102 - 17160157
Alignment:
Q  446 agcccgtttttcgctataattattttaattatttattatgtgtgtttatatatgctt 502  Q
    ||||||||||||| || |||||||||| |||||| |||||||||||| ||| |||||    
T  17160102 agcccgtttttcgttagaattattttatttattt-ttatgtgtgtttgtatgtgctt 17160157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0964 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0964
Description:

Target: scaffold0964; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 445 - 529
Target Start/End: Complemental strand, 3008 - 2924
Alignment:
Q  445 tagcccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    ||||||||||||| ||| ||||| |||||||||||||| ||| ||||||||| ||||| ||| |||||| |||||||||||||||    
T  3008 tagcccgtttttcactagaattaatttaattatttattttgtatgtttatatgtgcttgtatctgattatttgtctttgtgtgta 2924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 9e-19; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 452 - 520
Target Start/End: Complemental strand, 20511148 - 20511080
Alignment:
Q  452 tttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtct 520  Q
    |||||||||| |||||||||||||||||||||||| ||||||||| || || |||||||||||||||||    
T  20511148 tttttcgctagaattattttaattatttattatgtatgtttatatgtgtttgtatgtgattaattgtct 20511080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 448 - 528
Target Start/End: Complemental strand, 18996079 - 18995999
Alignment:
Q  448 cccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgt 528  Q
    |||| ||||||| ||| |||||||||||| ||||||||||||||||| | ||||| ||| |||||| |||||| |||||||    
T  18996079 cccgattttcgcaatagttattttaattaattattatgtgtgtttatttgtgcttgtatatgattatttgtctctgtgtgt 18995999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 448 - 520
Target Start/End: Complemental strand, 24282453 - 24282382
Alignment:
Q  448 cccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtct 520  Q
    |||||||||| ||| |||||||||||||||||||||| |||| |||||| ||||| ||| |||||||||||||    
T  24282453 cccgtttttcactaaaattattttaattatttattatttgtg-ttatatgtgcttgtatatgattaattgtct 24282382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 448 - 529
Target Start/End: Complemental strand, 28775072 - 28774992
Alignment:
Q  448 cccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    |||||||||||||| ||| ||||||||||||||||| ||||| |||||| || || ||| |||||| |||||| ||||||||    
T  28775072 cccgtttttcgctagaat-attttaattatttattacgtgtgattatatgtgtttgtatatgattatttgtctgtgtgtgta 28774992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 463 - 529
Target Start/End: Complemental strand, 19285397 - 19285332
Alignment:
Q  463 aattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    ||||||||||||||||||||||||||| ||||||  | || | ||||||||||||||| ||||||||    
T  19285397 aattattttaattatttattatgtgtg-ttatatgcgtttgtgtgtgattaattgtctctgtgtgta 19285332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 452 - 526
Target Start/End: Original strand, 24699272 - 24699346
Alignment:
Q  452 tttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgt 526  Q
    ||||||| || |||||||||||||||||||||| ||||||||||| |  || | |||| ||||||| ||||||||    
T  24699272 tttttcgatagaattattttaattatttattatatgtgtttatatgtatttatgtgtgcttaattgcctttgtgt 24699346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 480 - 529
Target Start/End: Original strand, 19901698 - 19901747
Alignment:
Q  480 attatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    ||||||||||||||||| | ||| ||||||||||||| ||||||||||||    
T  19901698 attatgtgtgtttatatgttcttgtatgtgattaattttctttgtgtgta 19901747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 446 - 526
Target Start/End: Original strand, 24689915 - 24689995
Alignment:
Q  446 agcccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgt 526  Q
    ||||| ||||||| || |||||||||||||||||||||| ||||| ||||| |  || | |||| ||||||| ||||||||    
T  24689915 agcccatttttcgatagaattattttaattatttattatatgtgtatatatgtatttatgtgtgcttaattgcctttgtgt 24689995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 529
Target Start/End: Complemental strand, 21655047 - 21654964
Alignment:
Q  446 agcccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    |||| |||||| |||| |||||| |||||||||||||||||||| ||||||  |||| | ||||| || |||| | ||||||||    
T  21655047 agcctgttttttgctaaaattatcttaattatttattatgtgtgattatatgcgcttgtgtgtgactatttgtatctgtgtgta 21654964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 496
Target Start/End: Original strand, 21909410 - 21909460
Alignment:
Q  446 agcccgtttttcgctataattattttaattatttattatgtgtgtttatat 496  Q
    ||||| ||||| | || |||||||||||||||||||||| |||||||||||    
T  21909410 agcccatttttagatagaattattttaattatttattatatgtgtttatat 21909460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 450 - 529
Target Start/End: Complemental strand, 78076 - 77997
Alignment:
Q  450 cgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    |||||||||||| |||| ||||||||||||||||||||| ||||||  ||||| |||||||||| |||||| ||||||||    
T  78076 cgtttttcgctagaattcttttaattatttattatgtgtatttataggtgcttgtatgtgattatttgtctgtgtgtgta 77997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 446 - 513
Target Start/End: Original strand, 204092 - 204159
Alignment:
Q  446 agcccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgatta 513  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||||||| || | ||||||||    
T  204092 agcccgtttttcgttagaattattttaattatttattatgtgtgtttatatatgtttgtgtgtgatta 204159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 5e-17; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 448 - 529
Target Start/End: Complemental strand, 16572000 - 16571919
Alignment:
Q  448 cccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    ||||||||||||||| |||| |||||||||||||||||||| ||||||| | ||  ||||||||||||||||| ||| ||||    
T  16572000 cccgtttttcgctatgattaatttaattatttattatgtgtatttatatgtcctcgtatgtgattaattgtctatgtatgta 16571919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 450 - 529
Target Start/End: Complemental strand, 21982793 - 21982714
Alignment:
Q  450 cgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    ||||||||| || |||||||||| |||||||||||||||| |||||| ||||| ||| |||||| || ||||||||||||    
T  21982793 cgtttttcgttagaattattttatttatttattatgtgtgcttatatgtgcttgtatatgattatttatctttgtgtgta 21982714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 453 - 529
Target Start/End: Complemental strand, 28801630 - 28801555
Alignment:
Q  453 ttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    ||||||||| |||||||||||||| ||||||||||||||||||| ||||| ||| ||| || |||||| ||||||||    
T  28801630 ttttcgctagaattattttaattaattattatgtgtgtttatatgtgcttgtatatga-tatttgtctctgtgtgta 28801555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 451 - 529
Target Start/End: Complemental strand, 9273466 - 9273388
Alignment:
Q  451 gtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    |||||| |||| ||||| ||||||| |||||||||| ||||| |||||| || | | ||||||||||||| ||||||||    
T  9273466 gtttttagctagaattaatttaattgtttattatgtttgtttctatatgtttatgtttgattaattgtctctgtgtgta 9273388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 452 - 494
Target Start/End: Complemental strand, 11777046 - 11777004
Alignment:
Q  452 tttttcgctataattattttaattatttattatgtgtgtttat 494  Q
    |||||||||| ||||||||||| ||||||||||||||||||||    
T  11777046 tttttcgctagaattattttaactatttattatgtgtgtttat 11777004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 445 - 502
Target Start/End: Complemental strand, 16684957 - 16684900
Alignment:
Q  445 tagcccgtttttcgctataattattttaattatttattatgtgtgtttatatatgctt 502  Q
    ||||||||||||||||| |||||||||| |||||| || | ||||||||||| |||||    
T  16684957 tagcccgtttttcgctagaattattttatttatttgttttatgtgtttatatgtgctt 16684900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 448 - 529
Target Start/End: Complemental strand, 15712258 - 15712175
Alignment:
Q  448 cccgtttttcgctataattattttaattatttatta--tgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    ||||||||||| || |||||||||| |||||||||   | ||||||||||  ||||| | |||||||||||| |||||||||||    
T  15712258 cccgtttttcgttagaattattttatttatttatttattatgtgtttataagtgcttgtgtgtgattaattgcctttgtgtgta 15712175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 451 - 526
Target Start/End: Complemental strand, 9253495 - 9253420
Alignment:
Q  451 gtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgt 526  Q
    |||||| |||| ||||| || ||| ||||||||||| |||||||||||| || | | ||||||||||||| |||||    
T  9253495 gtttttagctagaattaattaaatgatttattatgtttgtttatatatgtttatgtatgattaattgtctctgtgt 9253420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 453 - 520
Target Start/End: Complemental strand, 9567397 - 9567330
Alignment:
Q  453 ttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtct 520  Q
    ||||| ||| |||||||||||||| |||||||||||| |||||| ||  | |||||||||| ||||||    
T  9567397 ttttcactagaattattttaattaattattatgtgtggttatatgtgtctgtatgtgattatttgtct 9567330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 452 - 529
Target Start/End: Complemental strand, 9652827 - 9652752
Alignment:
Q  452 tttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    ||||||| || | |||||||||||| || ||||||||  |||||| ||||| ||||||| ||||||||| ||||||||    
T  9652827 tttttcgttagatttattttaattaatttttatgtgt--ttatatgtgcttttatgtgactaattgtctctgtgtgta 9652752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 446 - 511
Target Start/End: Original strand, 23269250 - 23269315
Alignment:
Q  446 agcccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgat 511  Q
    |||||| ||||||||||| |||||||||||| || |  ||||||||||||| ||||| | ||||||    
T  23269250 agcccgattttcgctatatttattttaattacttttattgtgtgtttatatgtgcttgtgtgtgat 23269315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 502
Target Start/End: Original strand, 6942864 - 6942896
Alignment:
Q  470 ttaattatttattatgtgtgtttatatatgctt 502  Q
    ||||||||||||||||||||||||||| |||||    
T  6942864 ttaattatttattatgtgtgtttatatgtgctt 6942896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 473 - 529
Target Start/End: Original strand, 12333994 - 12334050
Alignment:
Q  473 attatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    |||| ||||||||||||||||||| ||  | | ||||||||||||||| ||||||||    
T  12333994 attaattattatgtgtgtttatatgtgtctgtttgtgattaattgtctatgtgtgta 12334050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 450 - 529
Target Start/End: Original strand, 202204 - 202282
Alignment:
Q  450 cgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    ||||||||| || |||||||||||||||||||||||||| ||||||| ||||| ||||||| || |||||| ||||||||    
T  202204 cgtttttcgatagaattattttaattatttattatgtgtatttatatgtgcttgtatgtga-tatttgtctctgtgtgta 202282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0196 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0196
Description:

Target: scaffold0196; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 449 - 529
Target Start/End: Original strand, 17701 - 17780
Alignment:
Q  449 ccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    ||||||||||||| |||||||||||||||||||||| |||| ||||||   ||| | |||||||| |||||||||||||||    
T  17701 ccgtttttcgctagaattattttaattatttattatatgtg-ttatatgcacttgtgtgtgattatttgtctttgtgtgta 17780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 453 - 529
Target Start/End: Complemental strand, 19737 - 19661
Alignment:
Q  453 ttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    ||||| ||| |||||||||||||| ||||||||||||||||||| ||||| || |||| ||||||||  ||||||||    
T  19737 ttttccctagaattattttaattaattattatgtgtgtttatatctgcttgtaagtgaataattgtcactgtgtgta 19661  T

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Target: scaffold0186 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 454 - 529
Target Start/End: Complemental strand, 19897 - 19822
Alignment:
Q  454 tttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    ||||| || |||||||||||||||||||||| ||||||||||| || || | ||||||||||||||  ||||||||    
T  19897 tttcgttagaattattttaattatttattatatgtgtttatatgtgtttatgtgtgattaattgtccatgtgtgta 19822  T

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Target: scaffold0004 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 446 - 529
Target Start/End: Original strand, 370687 - 370770
Alignment:
Q  446 agcccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    ||||| |||||||||| ||||||||||||| |||||||| ||||||||||  || || | ||||||||||||||  ||||||||    
T  370687 agcccatttttcgctagaattattttaattgtttattatatgtgtttatacgtgtttatgtgtgattaattgtccctgtgtgta 370770  T

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Target: scaffold0112 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 465 - 529
Target Start/End: Complemental strand, 14031 - 13967
Alignment:
Q  465 ttattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    |||||||||||  ||||||| | ||||||||| |||||||||||||||||||| || ||||||||    
T  14031 ttattttaattcattattatatatgtttatatgtgcttctatgtgattaattgcctctgtgtgta 13967  T

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Target: scaffold0040 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 446 - 502
Target Start/End: Original strand, 42367 - 42423
Alignment:
Q  446 agcccgtttttcgctataattattttaattatttattatgtgtgtttatatatgctt 502  Q
    |||||||||||||||| |||||||||||||||||||||| |||| || ||| |||||    
T  42367 agcccgtttttcgctagaattattttaattatttattatatgtggttgtatgtgctt 42423  T

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Target: scaffold0205 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 453 - 515
Target Start/End: Complemental strand, 8817 - 8755
Alignment:
Q  453 ttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaat 515  Q
    ||||||||| | ||||||| |||  ||||||||||||||||| ||||||| ||||||||||||    
T  8817 ttttcgctagatttatttttatttgttattatgtgtgtttatttatgcttgtatgtgattaat 8755  T

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Target: scaffold0772 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 452 - 529
Target Start/End: Original strand, 2111 - 2187
Alignment:
Q  452 tttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    ||||||| || | ||||||| ||||||| |||| | ||||||||| ||||| ||||||||||||||||| ||||||||    
T  2111 tttttcgttacatttatttttattattt-ttatatatgtttatatgtgcttatatgtgattaattgtctctgtgtgta 2187  T

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Target: scaffold0001 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 448 - 496
Target Start/End: Original strand, 151223 - 151271
Alignment:
Q  448 cccgtttttcgctataattattttaattatttattatgtgtgtttatat 496  Q
    ||||||||| ||||||||||||||||||| || |||||| |||||||||    
T  151223 cccgttttttgctataattattttaattaatttttatgtatgtttatat 151271  T

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Target: scaffold0001; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 452 - 494
Target Start/End: Complemental strand, 155658 - 155616
Alignment:
Q  452 tttttcgctataattattttaattatttattatgtgtgtttat 494  Q
    |||||||||| ||||||||||||||||||||||  ||||||||    
T  155658 tttttcgctagaattattttaattatttattatacgtgtttat 155616  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 454 - 496
Target Start/End: Complemental strand, 109148 - 109106
Alignment:
Q  454 tttcgctataattattttaattatttattatgtgtgtttatat 496  Q
    |||||||| |||||||||||||| ||||||| |||||||||||    
T  109148 tttcgctagaattattttaattaattattatatgtgtttatat 109106  T

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Target: scaffold0305 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 529
Target Start/End: Complemental strand, 10348 - 10303
Alignment:
Q  484 tgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    ||||||||||||| ||||| | ||||||||||||||| ||||||||    
T  10348 tgtgtgtttatatgtgcttgtctgtgattaattgtctatgtgtgta 10303  T

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Target: scaffold0183 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 529
Target Start/End: Complemental strand, 11886 - 11826
Alignment:
Q  468 ttttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    |||||||||||| | || ||||||||||| |||||  ||||||||||||| |||||||||||    
T  11886 ttttaattattt-taatatgtgtttatatctgcttaaatgtgattaattgcctttgtgtgta 11826  T

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Target: scaffold0058 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 529
Target Start/End: Complemental strand, 73628 - 73550
Alignment:
Q  449 ccgtttttcgctataattattttaattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    ||||||||||||| ||||||||||  |||||||  ||||||||||||| ||||| | ||| |||| |||| | ||||||||    
T  73628 ccgtttttcgctagaattattttatatatttat--tgtgtgtttatatgtgcttgtgtgtcattatttgtttctgtgtgta 73550  T

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Target: scaffold0013 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 529
Target Start/End: Original strand, 6439 - 6523
Alignment:
Q  445 tagcccgtttttcgctataattatttt-aattatttattatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    ||||||| ||||||||| | ||||||| |||| ||| |||||||||||| | ||||||  |||||||||||||| || ||||||||    
T  6439 tagcccgattttcgctagatttatttttaattgttt-ttatgtgtgtttgtttatgctcgtatgtgattaattgcctatgtgtgta 6523  T

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Target: scaffold0331 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 481 - 529
Target Start/End: Original strand, 5200 - 5248
Alignment:
Q  481 ttatgtgtgtttatatatgcttctatgtgattaattgtctttgtgtgta 529  Q
    |||||||||||||||| ||||| | |||||||||||| || ||||||||    
T  5200 ttatgtgtgtttatatgtgcttgtttgtgattaattgcctctgtgtgta 5248  T

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Target: scaffold0233 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 452 - 496
Target Start/End: Complemental strand, 16493 - 16449
Alignment:
Q  452 tttttcgctataattattttaattatttattatgtgtgtttatat 496  Q
    |||||||||| || |||||||  ||||||||||||||||||||||    
T  16493 tttttcgctagaactattttagatatttattatgtgtgtttatat 16449  T

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