View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4519_low_16 (Length: 274)
Name: NF4519_low_16
Description: NF4519
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4519_low_16 |
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Alignment Details
Target: chr3 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 10 - 258
Target Start/End: Complemental strand, 37092195 - 37091947
Alignment:
| Q |
10 |
caattagaacgtgacaaaatatcatcacaattcacaagtttatacatttaatagttgtggaaagtggaaagttagaagaaaaatgaaattaaaacaaaaa |
109 |
Q |
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| T |
37092195 |
caattagaacgtgacaaaatatcatcacaattcacaagtttatacatttaataattgtggaaagtggaaagttagaagaaaaatgaaattaaaacataaa |
37092096 |
T |
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| Q |
110 |
gtataaactaacctttcacaattccattgtccaaaccaacttatatgtggatgaatattcagaaggggagttaactcaaacggatgcagataataaacaa |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37092095 |
gtataaactaacctttcacaattccattgtccaaaccaacttatatgtggatgaatattcagaaggggagttaactcaaacggatgcagataataaacaa |
37091996 |
T |
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| Q |
210 |
gttttattaagagaagtttaactaacaaattatattttcttgttctttg |
258 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37091995 |
gttttattaagagaagtttaactaacaaattatattttcttgttctttg |
37091947 |
T |
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