View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4519_low_2 (Length: 520)
Name: NF4519_low_2
Description: NF4519
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4519_low_2 |
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Alignment Details
Target: chr4 (Bit Score: 452; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 452; E-Value: 0
Query Start/End: Original strand, 18 - 502
Target Start/End: Complemental strand, 31047463 - 31046979
Alignment:
| Q |
18 |
atatccactcctcaaaaacacactcagtacctttaacatgggaatatcacacnnnnnnnctcccttagacatggcaacagacacacaaacatcatcatca |
117 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
31047463 |
atatccactcctcaaaaacacactcagtacctttaacatgggaatatcacacaaaaaaactcccttagacatggcaacagacacacaaacatcatcatca |
31047364 |
T |
|
| Q |
118 |
acacaaccaacagcaataaaccaagagacatggaaccaactcttaggcaacaacaactgggaaaccttattaaacccactagacctcaatctccgcaacc |
217 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31047363 |
acacaaccaacaacaataaaccaagagacatggaaccaactcttaggcaacaacaactgggaaaccttattaaacccactagacctcaatctccgcaacc |
31047264 |
T |
|
| Q |
218 |
tcatcctccgttgtggtgacttcatacaaacaacctacgactctttcaacaacgaccaaaactctatctactgcggttcaagccgttttggcaaaacctc |
317 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
31047263 |
tcatcctccgttgtggtgacttcatacaaacaacctacgactctttcaacaacgaccaaaactctatctactgcggttcaagccgttatggcaaaacctc |
31047164 |
T |
|
| Q |
318 |
attctttaacaaagtcatgcttgaaaaccctacacactacactgttgtttctttcctttacgctacagcacgtgtttctgttcctgaagcttttattctt |
417 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
31047163 |
attctttaacaaagtcatgcttgaaaaccctacacactacactgttgtttctttcctttatgctacagcacgtgtttctgttcctgaagcttttattctt |
31047064 |
T |
|
| Q |
418 |
cactcactttcacgtgagagttgggaccgtgagtctaactggattggttacatcgctgttagttccgatgaacggagtagagagt |
502 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31047063 |
cactcactttcacgtgagagttgggaccgtgagtctaactggattggttacatcgctgttagttccgatgaacggagtagagagt |
31046979 |
T |
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