View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4520-Insertion-2 (Length: 1080)

Name: NF4520-Insertion-2
Description: NF4520
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4520-Insertion-2
NF4520-Insertion-2
[»] chr5 (36 HSPs)
chr5 (8-760)||(42563069-42563823)
chr5 (765-959)||(2852890-2853085)
chr5 (765-1012)||(21842824-21843077)
chr5 (760-1012)||(40782043-40782301)
chr5 (765-1012)||(17577767-17578020)
chr5 (760-1001)||(7269290-7269536)
chr5 (765-1012)||(29620142-29620395)
chr5 (759-958)||(12738627-12738827)
chr5 (759-958)||(12801450-12801650)
chr5 (765-958)||(30463904-30464098)
chr5 (765-958)||(8541162-8541356)
chr5 (765-1001)||(42471552-42471793)
chr5 (765-958)||(28821981-28822175)
chr5 (765-958)||(34328714-34328912)
chr5 (758-1002)||(28813608-28813859)
chr5 (758-1002)||(32134228-32134482)
chr5 (765-956)||(41493848-41494040)
chr5 (765-880)||(40780554-40780669)
chr5 (760-850)||(24541247-24541337)
chr5 (765-850)||(2854362-2854446)
chr5 (765-880)||(29621786-29621901)
chr5 (756-850)||(17574313-17574407)
chr5 (765-880)||(42473612-42473727)
chr5 (840-949)||(27077367-27077477)
chr5 (765-850)||(36057648-36057733)
chr5 (760-850)||(8539674-8539764)
chr5 (765-850)||(2179791-2179876)
chr5 (765-850)||(7267847-7267932)
chr5 (756-850)||(34327630-34327724)
chr5 (931-1012)||(24539933-24540019)
chr5 (766-842)||(30468323-30468399)
chr5 (700-760)||(20700258-20700318)
chr5 (798-866)||(42619326-42619394)
chr5 (771-850)||(43492133-43492212)
chr5 (673-739)||(14810360-14810426)
chr5 (771-880)||(1344786-1344895)
[»] chr1 (48 HSPs)
chr1 (759-1012)||(26223585-26223844)
chr1 (765-1012)||(8167946-8168198)
chr1 (765-958)||(46582014-46582208)
chr1 (758-1012)||(27089111-27089371)
chr1 (765-1012)||(37345794-37346047)
chr1 (754-1012)||(25276735-25276999)
chr1 (765-1001)||(4854414-4854655)
chr1 (765-1001)||(34776573-34776814)
chr1 (765-1012)||(8169400-8169653)
chr1 (758-1012)||(9120036-9120296)
chr1 (772-1001)||(33599229-33599463)
chr1 (765-1012)||(47011460-47011713)
chr1 (765-1012)||(1444013-1444266)
chr1 (759-957)||(31236817-31237016)
chr1 (765-957)||(3011859-3012052)
chr1 (765-958)||(2870967-2871161)
chr1 (765-958)||(51894571-51894765)
chr1 (765-958)||(52641892-52642086)
chr1 (765-941)||(50554167-50554344)
chr1 (834-958)||(45044993-45045118)
chr1 (760-954)||(37088031-37088226)
chr1 (765-941)||(23577640-23577817)
chr1 (831-953)||(6816906-6817030)
chr1 (760-850)||(46583591-46583681)
chr1 (765-850)||(33602679-33602764)
chr1 (765-880)||(47013087-47013202)
chr1 (757-850)||(4856001-4856094)
chr1 (765-850)||(34778173-34778258)
chr1 (765-880)||(9121673-9121788)
chr1 (757-828)||(25278425-25278496)
chr1 (765-841)||(2869583-2869659)
chr1 (759-850)||(27087281-27087372)
chr1 (765-828)||(37344346-37344409)
chr1 (758-850)||(31238530-31238622)
chr1 (765-824)||(6816869-6816928)
chr1 (760-850)||(3013511-3013601)
chr1 (758-841)||(25278851-25278934)
chr1 (760-850)||(25278988-25279078)
chr1 (765-823)||(33599191-33599249)
chr1 (766-880)||(51896157-51896271)
chr1 (765-850)||(52643650-52643735)
chr1 (765-824)||(1442554-1442613)
chr1 (845-911)||(3369514-3369580)
chr1 (760-850)||(6818713-6818803)
chr1 (759-821)||(45044947-45045009)
chr1 (765-843)||(50556139-50556217)
chr1 (926-1012)||(20944922-20945013)
chr1 (817-866)||(51123541-51123590)
[»] chr6 (32 HSPs)
chr6 (765-1012)||(32518329-32518582)
chr6 (765-1012)||(18644936-18645188)
chr6 (760-1012)||(3480489-3480747)
chr6 (760-1012)||(32454247-32454505)
chr6 (765-958)||(9399926-9400120)
chr6 (760-953)||(13610689-13610882)
chr6 (765-957)||(11357088-11357279)
chr6 (765-1001)||(20525178-20525419)
chr6 (765-957)||(6902790-6902982)
chr6 (765-1012)||(32437144-32437384)
chr6 (765-956)||(21068629-21068821)
chr6 (765-958)||(10569810-10570004)
chr6 (759-958)||(7371173-7371373)
chr6 (817-958)||(33267117-33267259)
chr6 (760-958)||(7051136-7051335)
chr6 (836-956)||(21091169-21091290)
chr6 (760-880)||(13613587-13613707)
chr6 (817-958)||(21045366-21045508)
chr6 (765-880)||(32455896-32456011)
chr6 (779-880)||(3456766-3456867)
chr6 (845-957)||(14337750-14337862)
chr6 (760-850)||(32439126-32439216)
chr6 (754-822)||(32516870-32516938)
chr6 (765-850)||(7372993-7373078)
chr6 (765-822)||(11355226-11355283)
chr6 (765-850)||(20523370-20523455)
chr6 (765-880)||(33276805-33276917)
chr6 (760-850)||(10568398-10568488)
chr6 (760-843)||(6899484-6899567)
chr6 (765-824)||(8605351-8605410)
chr6 (764-822)||(7049789-7049847)
chr6 (765-799)||(21091110-21091144)
[»] chr4 (32 HSPs)
chr4 (760-1001)||(51013730-51013976)
chr4 (760-1012)||(43507166-43507424)
chr4 (765-1012)||(43508485-43508738)
chr4 (765-1012)||(4173572-4173825)
chr4 (765-1012)||(33264386-33264640)
chr4 (765-1012)||(319277-319530)
chr4 (760-1012)||(320732-320990)
chr4 (765-1012)||(33265842-33266095)
chr4 (756-1012)||(833218-833480)
chr4 (765-950)||(4169690-4169876)
chr4 (766-1012)||(43520941-43521193)
chr4 (760-1012)||(5439479-5439737)
chr4 (759-958)||(35401747-35401947)
chr4 (760-1012)||(5437810-5438068)
chr4 (760-958)||(49524624-49524823)
chr4 (760-1012)||(834874-835132)
chr4 (760-958)||(20493826-20494025)
chr4 (760-958)||(11254118-11254316)
chr4 (771-958)||(39345574-39345762)
chr4 (765-958)||(48645259-48645453)
chr4 (759-958)||(42982343-42982543)
chr4 (761-958)||(54387774-54387970)
chr4 (765-880)||(43519428-43519543)
chr4 (765-957)||(20819989-20820176)
chr4 (765-953)||(2691378-2691566)
chr4 (847-912)||(41759492-41759557)
chr4 (765-850)||(41761781-41761866)
chr4 (765-850)||(49523128-49523213)
chr4 (674-760)||(29575428-29575514)
chr4 (760-850)||(41781538-41781628)
chr4 (765-850)||(51011930-51012015)
chr4 (765-824)||(48813791-48813850)
[»] chr3 (56 HSPs)
chr3 (756-1012)||(3150247-3150509)
chr3 (758-1012)||(53187739-53187999)
chr3 (765-1012)||(38193342-38193595)
chr3 (765-1012)||(46308811-46309064)
chr3 (765-1012)||(46310268-46310521)
chr3 (765-1001)||(41979196-41979437)
chr3 (765-1012)||(53092627-53092880)
chr3 (765-1001)||(54899918-54900159)
chr3 (760-1012)||(53094105-53094363)
chr3 (765-1001)||(7883332-7883573)
chr3 (765-1012)||(46611135-46611388)
chr3 (765-1012)||(44795722-44795975)
chr3 (765-1001)||(35903829-35904070)
chr3 (766-1012)||(2661740-2661992)
chr3 (758-1012)||(46609146-46609406)
chr3 (765-1012)||(28626415-28626668)
chr3 (765-938)||(38191899-38192073)
chr3 (765-958)||(2378874-2379068)
chr3 (756-958)||(611113-611316)
chr3 (765-958)||(23291574-23291767)
chr3 (760-957)||(30598336-30598534)
chr3 (771-958)||(17516864-17517052)
chr3 (765-958)||(54412438-54412632)
chr3 (765-958)||(42282364-42282558)
chr3 (760-958)||(44267980-44268179)
chr3 (767-957)||(46113997-46114189)
chr3 (765-958)||(21350496-21350690)
chr3 (765-958)||(51686285-51686479)
chr3 (765-956)||(48829360-48829552)
chr3 (759-954)||(27897149-27897344)
chr3 (811-958)||(43766938-43767086)
chr3 (767-842)||(2660218-2660293)
chr3 (759-850)||(54898435-54898526)
chr3 (760-850)||(44794207-44794296)
chr3 (765-850)||(41977754-41977839)
chr3 (765-880)||(3152243-3152358)
chr3 (765-850)||(2226207-2226292)
chr3 (765-850)||(53190814-53190899)
chr3 (760-850)||(27899136-27899226)
chr3 (760-850)||(21348722-21348812)
chr3 (305-382)||(36309079-36309154)
chr3 (774-850)||(35905767-35905843)
chr3 (765-828)||(43765141-43765204)
chr3 (765-822)||(7884927-7884984)
chr3 (765-850)||(30599973-30600058)
chr3 (802-880)||(19987619-19987697)
chr3 (847-905)||(24846491-24846548)
chr3 (765-850)||(17515314-17515399)
chr3 (759-842)||(51684608-51684691)
chr3 (765-842)||(46112491-46112568)
chr3 (214-278)||(36325710-36325774)
chr3 (765-880)||(23293195-23293310)
chr3 (771-850)||(23774162-23774241)
chr3 (765-831)||(2377033-2377099)
chr3 (765-850)||(42279511-42279596)
chr3 (759-800)||(600723-600764)
[»] chr8 (49 HSPs)
chr8 (765-1012)||(27692669-27692922)
chr8 (760-1001)||(38548675-38548921)
chr8 (765-1001)||(8608241-8608483)
chr8 (760-1012)||(29237150-29237408)
chr8 (759-1001)||(13106802-13107049)
chr8 (756-1001)||(13283839-13284089)
chr8 (760-1012)||(33761068-33761326)
chr8 (765-1001)||(33707210-33707451)
chr8 (757-1012)||(35509210-35509471)
chr8 (765-1012)||(35510651-35510904)
chr8 (765-1012)||(29239019-29239272)
chr8 (765-1012)||(601536-601789)
chr8 (760-1012)||(33762549-33762803)
chr8 (760-958)||(15308152-15308351)
chr8 (760-958)||(15488521-15488720)
chr8 (765-958)||(42943317-42943511)
chr8 (765-1012)||(27404214-27404467)
chr8 (754-953)||(5037958-5038157)
chr8 (755-958)||(22273782-22273986)
chr8 (765-956)||(26238730-26238922)
chr8 (765-958)||(41823894-41824088)
chr8 (759-958)||(43262030-43262228)
chr8 (769-958)||(13484553-13484742)
chr8 (760-958)||(41040719-41040918)
chr8 (776-911)||(15562439-15562573)
chr8 (765-880)||(27691158-27691273)
chr8 (773-958)||(3151969-3152155)
chr8 (765-880)||(33708829-33708943)
chr8 (760-850)||(38547227-38547317)
chr8 (765-850)||(13108391-13108476)
chr8 (765-850)||(13282482-13282567)
chr8 (836-956)||(17807094-17807215)
chr8 (759-850)||(8609842-8609933)
chr8 (765-880)||(9671981-9672096)
chr8 (765-842)||(34681074-34681151)
chr8 (779-880)||(15305815-15305916)
chr8 (779-880)||(15486184-15486285)
chr8 (765-880)||(42941778-42941893)
chr8 (765-842)||(5036449-5036526)
chr8 (757-850)||(13486154-13486247)
chr8 (765-820)||(600764-600819)
chr8 (765-880)||(27406922-27407037)
chr8 (853-959)||(29694207-29694314)
chr8 (765-850)||(41825699-41825784)
chr8 (765-850)||(22272338-22272425)
chr8 (771-851)||(31821428-31821508)
chr8 (765-850)||(26242369-26242454)
chr8 (765-850)||(41042639-41042724)
chr8 (765-828)||(7745189-7745252)
[»] chr2 (31 HSPs)
chr2 (758-1012)||(16764444-16764703)
chr2 (765-1001)||(14387353-14387594)
chr2 (765-1001)||(40561722-40561963)
chr2 (765-1012)||(24205602-24205855)
chr2 (760-958)||(6783363-6783562)
chr2 (755-1012)||(37022017-37022280)
chr2 (760-1012)||(2577312-2577570)
chr2 (765-958)||(19906686-19906880)
chr2 (765-958)||(39663158-39663352)
chr2 (759-958)||(16376734-16376934)
chr2 (765-958)||(39456671-39456865)
chr2 (765-954)||(6799302-6799493)
chr2 (759-958)||(42517556-42517755)
chr2 (765-951)||(34400318-34400505)
chr2 (765-958)||(19581418-19581612)
chr2 (765-958)||(37646369-37646563)
chr2 (845-958)||(17698000-17698114)
chr2 (765-956)||(31474972-31475165)
chr2 (756-957)||(161967-162168)
chr2 (760-850)||(16763075-16763165)
chr2 (755-880)||(37020502-37020627)
chr2 (760-880)||(14389109-14389229)
chr2 (765-880)||(24208067-24208182)
chr2 (760-880)||(6786006-6786126)
chr2 (760-850)||(2766933-2767023)
chr2 (760-850)||(39664803-39664893)
chr2 (758-850)||(40560220-40560312)
chr2 (758-850)||(44709800-44709892)
chr2 (765-867)||(17696210-17696312)
chr2 (765-842)||(19908309-19908387)
chr2 (765-850)||(42519260-42519346)
[»] chr7 (42 HSPs)
chr7 (759-1012)||(35403451-35403710)
chr7 (765-958)||(27664434-27664628)
chr7 (765-1012)||(35401973-35402226)
chr7 (760-1012)||(20479551-20479809)
chr7 (765-958)||(39857649-39857843)
chr7 (765-958)||(37113945-37114139)
chr7 (765-1001)||(77858-78099)
chr7 (765-957)||(47384298-47384491)
chr7 (760-958)||(13169574-13169773)
chr7 (765-958)||(48227832-48228026)
chr7 (756-958)||(6605288-6605491)
chr7 (765-958)||(46437111-46437305)
chr7 (765-958)||(24226585-24226779)
chr7 (759-958)||(45361167-45361367)
chr7 (839-1012)||(29994955-29995134)
chr7 (765-958)||(34775002-34775196)
chr7 (765-958)||(35691431-35691625)
chr7 (756-919)||(22155777-22155941)
chr7 (756-919)||(22211692-22211856)
chr7 (765-919)||(23904587-23904741)
chr7 (765-919)||(38549551-38549705)
chr7 (758-880)||(27666070-27666192)
chr7 (770-955)||(13039536-13039722)
chr7 (765-850)||(56334-56419)
chr7 (765-850)||(29996549-29996634)
chr7 (765-880)||(20478046-20478161)
chr7 (765-958)||(37791658-37791852)
chr7 (765-821)||(29994910-29994966)
chr7 (870-953)||(38472369-38472453)
chr7 (765-842)||(38474186-38474263)
chr7 (765-842)||(39859272-39859349)
chr7 (756-842)||(45359331-45359417)
chr7 (760-828)||(47386266-47386334)
chr7 (780-911)||(48311672-48311803)
chr7 (765-850)||(24228444-24228529)
chr7 (765-850)||(37115561-37115646)
chr7 (765-822)||(23906295-23906352)
chr7 (765-850)||(34776950-34777035)
chr7 (765-850)||(37796216-37796301)
chr7 (673-760)||(13010177-13010264)
chr7 (613-658)||(34249748-34249792)
chr7 (702-739)||(34693145-34693182)
[»] scaffold0081 (1 HSPs)
scaffold0081 (760-1012)||(54090-54348)
[»] scaffold1712 (1 HSPs)
scaffold1712 (759-1012)||(980-1239)
[»] scaffold0058 (4 HSPs)
scaffold0058 (757-900)||(14293-14436)
scaffold0058 (870-1012)||(7069-7217)
scaffold0058 (758-850)||(3291-3383)
scaffold0058 (758-850)||(4463-4555)
[»] scaffold0345 (1 HSPs)
scaffold0345 (765-957)||(1449-1640)
[»] scaffold0004 (1 HSPs)
scaffold0004 (765-894)||(106674-106801)
[»] scaffold0001 (1 HSPs)
scaffold0001 (836-953)||(63617-63735)
[»] scaffold0564 (1 HSPs)
scaffold0564 (765-850)||(8266-8351)
[»] scaffold1454 (1 HSPs)
scaffold1454 (765-850)||(1267-1352)


Alignment Details
Target: chr5 (Bit Score: 578; Significance: 0; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 578; E-Value: 0
Query Start/End: Original strand, 8 - 760
Target Start/End: Complemental strand, 42563823 - 42563069
Alignment:
Q  8 gcatgcggtttgtaaattgcaaatcaattacggatgaaggattttctagtgaagctgcgagaaagcttcggaaattagacaagcttgacatttcacattg 107  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42563823 gcatgcggtttgtaaattgcgaatcaattacggatgaaggattttctagtgaagctgcgagaaagcttcggaaattagacaagcttgacatttcacattg 42563724  T
Q  108 caacctaactaagtcctctcttgaagccattgaacaatgttgccctcttttgaagtcacttgaatacaaaagacgggcaattacggatttttatagttgt 207  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||             |||||||||||||||||||||||||    
T  42563723 caacctaactaagtcctctcttgaagccattggacaatgttgccctcttttgaagtcacttg-------------ggcaattacggatttttatagttgt 42563637  T
Q  208 aaggatatggcgtttgttatcgctgaaatgatgtctggtctgtgccatcttgatatcaatggatacaagcttactgatattggtttactaaccattcttc 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  42563636 aaggatatggcgtttgttatcgctgaaatgatgtctggtctgtgccatcttgatatcaatggacacaagcttactgatattggtttactaaccattcttc 42563537  T
Q  308 gtcgatgccattatctcaaattgagtgaaagtttgaagaaaaggtgcatttatatcagatcaatgttttgcaacttccaattcattttaactatgaagcc 407  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42563536 gtcgatgtcattatctcaaattgagtgaaagtttgaagaaaaggtgcatttatatcagatcaatgttttgcaacttccaattcattttaactatgaagcc 42563437  T
Q  408 atgtattgaggtattgtgtattatatgtaa-------------cagttgatgatttctatgatcacttttgattctgaatgtggaaaatctaagtgacga 494  Q
    ||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42563436 atgtattgaggtattgtgtattatatgtaacagtatatgctatcagttgatgatttctatgatcacttttgattctgaatgtggaaaatctaagtgacga 42563337  T
Q  495 tgaaaaacaaggctcttactatagtgcatatttcttggtatgtattcatcttcaagtggaattaattttttgcatagctctttttgttattgaacaaaat 594  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  42563336 tgaaaaacaaggctcttactatagtgcatatttcttggtatgtattcatcttcaagtggaattaattttttgcatagctccttttgttattgaacaaaat 42563237  T
Q  595 tgaagaacacnnnnnnnctcgtttgtttctgttggtctctttccgttttattagcccggtaacc--nnnnnnnnnnnnnncggtagcgctcatgctctca 692  Q
    |||| |||||       |||||||||||||||||||||||||||||||||||| ||||||||||                ||||||||||||||||||||    
T  42563236 tgaacaacactttttttctcgtttgtttctgttggtctctttccgttttattaacccggtaaccaaaaaaaataaataaacggtagcgctcatgctctca 42563137  T
Q  693 catgagcagccttatcccatgcttcaggaagtacttttgatgtaatttctcctagtattgctattatt 760  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42563136 catgagcagccttatcccatgcttcaggaagtacttttgatgtaatttctcctagtattgctattatt 42563069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 160; E-Value: 1e-84
Query Start/End: Original strand, 765 - 959
Target Start/End: Original strand, 2852890 - 2853085
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||| || ||||||||||||||||||||    
T  2852890 aatacctcaaattcgtccttgaattttaaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaatttacaaaatgtcaatc 2852989  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagga 959  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  2852990 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacttcagatgccacgcaagcagga 2853085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 158; E-Value: 2e-83
Query Start/End: Original strand, 765 - 1012
Target Start/End: Complemental strand, 21843077 - 21842824
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  21843077 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccatgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatc 21842978  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-ggacc- 961  Q
    ||||||||||||||||||||||  | | |||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||     
T  21842977 aaatcagtccctccgttaagttttttttttaacggaggtgacgtgttacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggacca 21842878  T
Q  962 aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||||| |||||||||| |||||| |||||||||||||||| ||||||||||||    
T  21842877 aactgattgatttacacaaaattttcaatgaccaaattgatggatttacacaaa 21842824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 147; E-Value: 6e-77
Query Start/End: Original strand, 760 - 1012
Target Start/End: Complemental strand, 40782301 - 40782043
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgt 859  Q
    |||| ||||||||||| | ||||||||||||||||||||||| ||||| |||||||||||||| ||||| |||||||||||||| |||||||||||||||    
T  40782301 tgactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgt 40782202  T
Q  860 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-g 957  Q
    ||||||||| |||||||||||||| |||||| ||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||| |    
T  40782201 caatcaaattagtccctccgttaatttggtccgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagg 40782102  T
Q  958 gacc-aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||| |||||| |||||||||| ||||||| || ||| |||||||| ||||||||||||    
T  40782101 gaccaaactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaa 40782043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 765 - 1012
Target Start/End: Complemental strand, 17578020 - 17577767
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||||||||||||| | ||| | |||||||||||||| ||| ||||||||||| |  ||||||||||||||||||||    
T  17578020 aatacctcaaattcgtccttgaattttgaaaaatcggcccatttcttccctgaattttgcaaaatatcaaattagttcatgaatttacaaaatgtcaatc 17577921  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-ggacc- 961  Q
    ||||||||||||||||||| ||||||||||||||||| |||| ||||||||||| |||| |||||||||||||||||||||| |||||||||| |||||     
T  17577920 aaatcagtccctccgttaaattggtctgttaacggagctgacgtgtaacgttaacctctaacaaagcttaccacgtcagatgtcacgcaagcagggacca 17577821  T
Q  962 aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||||| |||||||||| |||||||||| |||||||||||| ||||||||||||    
T  17577820 aactgattgatttacacaaaatttccaaggaccaaattgatggatttacacaaa 17577767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 760 - 1001
Target Start/End: Complemental strand, 7269536 - 7269290
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgt 859  Q
    |||| ||||||||||||||||| ||||||||| |||||||||  |||| |||||||||||||||||||| |||||||||||||| ||||||| |||||||    
T  7269536 tgactaatacctcaaattcgtctttgaattttaaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttataaaatgt 7269437  T
Q  860 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-g 957  Q
     |||||||||||||  |||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| | |    
T  7269436 taatcaaatcagtcagtccgttaagttgatctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagtagg 7269337  T
Q  958 gacc-aactga-tgatttacac-aaatttccaatgaccaaattgatg 1001  Q
    |||| |||||| |||||||||| |||||||||| |||||||||||||    
T  7269336 gaccaaactgattgatttacacaaaatttccaaggaccaaattgatg 7269290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 765 - 1012
Target Start/End: Original strand, 29620142 - 29620395
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||| | ||||||||||||||||||||||| ||||| |||||||||||||| ||||| |||||||||||| | ||||||||||||||||||||    
T  29620142 aatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtctctgaatttacaaaatgtcaatc 29620241  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-ggacc- 961  Q
    |||| |||||||||||||| |||||| ||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||| |||||||||| |||||     
T  29620242 aaattagtccctccgttaatttggtccgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgacacgcaagcagggacca 29620341  T
Q  962 aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||||| |||||||||| ||||||  || ||| |||||||| ||||||||||||    
T  29620342 aactgattgatttacacaaaattttgaaggacgaaattgatggatttacacaaa 29620395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 759 - 958
Target Start/End: Complemental strand, 12738827 - 12738627
Alignment:
Q  759 ttgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatg 858  Q
    ||||| ||||||||||||||||||||||||||| ||||||||| ||| | ||| |||||||||||||||| ||| | |||||||| ||||||||||||||    
T  12738827 ttgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaatttacaaaatg 12738728  T
Q  859 tcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcag 957  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||| |||   ||||||||||||||||||||||||||||    
T  12738727 tcaatcaaatcagtccctccgttaagttggtttgttaacggaggtgacgtgtaacgttaacctcttacatgacttaccacgtcagatgccacgcaagcag 12738628  T
Q  958 g 958  Q
    |    
T  12738627 g 12738627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 759 - 958
Target Start/End: Complemental strand, 12801650 - 12801450
Alignment:
Q  759 ttgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatg 858  Q
    ||||| ||||||||||||||||||||||||||| ||||||||| ||| | ||| |||||||||||||||| ||| | |||||||| ||||||||||||||    
T  12801650 ttgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaatttacaaaatg 12801551  T
Q  859 tcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcag 957  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||| |||   ||||||||||||||||||||||||||||    
T  12801550 tcaatcaaatcagtccctccgttaagttggtttgttaacggaggtgacgtgtaacgttaacctcttacatgacttaccacgtcagatgccacgcaagcag 12801451  T
Q  958 g 958  Q
    |    
T  12801450 g 12801450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 127; E-Value: 5e-65
Query Start/End: Original strand, 765 - 958
Target Start/End: Original strand, 30463904 - 30464098
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||| ||| | |||||||| ||||||||||||| ||||||    
T  30463904 aatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaatttacaaaatatcaatc 30464003  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    ||||||||||||| |||||||||||||||| ||||||||||| ||||||||||| |||| |||| |||||||| |||||||| ||||||||||||    
T  30464004 aaatcagtccctctgttaagttggtctgtttacggaggtgacgtgtaacgttaacctcttacaaggcttaccatgtcagatgtcacgcaagcagg 30464098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 765 - 958
Target Start/End: Complemental strand, 8541356 - 8541162
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||| ||||||||| ||||||||| ||| | |||||||||||||||||||| ||| | |||||||  ||||||||||||||||||||    
T  8541356 aatacctcaaattcgtcattgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccttgaatttacaaaatgtcaatc 8541257  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||| |||| ||||||||||||||||| || |||||||||    
T  8541256 aaatcagtccctccgttaagttggtctgttaacggaggtgatgtgtaacgttaacctcttacaaggcttaccacgtcagatgtcatgcaagcagg 8541162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 765 - 1001
Target Start/End: Original strand, 42471552 - 42471793
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||| | ||||||||||||||||||||||| ||||| |||||||||||| | ||||| |||||| |||| |  ||||||||||||||||||||    
T  42471552 aatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtacatgaatttacaaaatgtcaatc 42471651  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcaggacc-- 961  Q
    |||| |||||||| ||||| |||||||||||||||||||||| ||| ||||||| |||||||||||| |||||||||||||||||||||||||||  |      
T  42471652 aaattagtccctctgttaaattggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcgtaccacgtcagatgccacgcaagcagggacta 42471751  T
Q  962 aactgat-gatttacac-aaatttccaatgaccaaattgatg 1001  Q
    || |||| ||||||||| |||||||||| |||||||||||||    
T  42471752 aattgatggatttacacaaaatttccaaggaccaaattgatg 42471793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 115; E-Value: 7e-58
Query Start/End: Original strand, 765 - 958
Target Start/End: Complemental strand, 28822175 - 28821981
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||| |||||| |||||| | ||||||||||||||||||||   | | || ||||  ||||||||||||||||||||    
T  28822175 aatacctcaaattcgtccttgaatttttaaaaataggtcaaattcgtccctgaattttgcgaaattgctattttgtccttgaatttacaaaatgtcaatc 28822076  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||| |||| |||||||| ||||||||||| |||||||||    
T  28822075 aaatcagtccctccgttaagttggtctgttaacggaagtgacgtgtaacgttaacctcttacaaggcttaccatgtcagatgccaagcaagcagg 28821981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 110; E-Value: 7e-55
Query Start/End: Original strand, 765 - 958
Target Start/End: Complemental strand, 34328912 - 34328714
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||| ||||||||||||| | ||||| |||||||||| ||| | | | || ||||  ||||||||||||||||||||    
T  34328912 aatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccatgaattttgcaaaatagctattttgtccttgaatttacaaaatgtcaatc 34328813  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaac-tctgacaa----agcttaccacgtcagatgccacgcaagcagg 958  Q
    ||||||||| ||||||||||||||||||||||||| |||||| |||||||||||| ||| ||||    |||||||||||||||||||||||||||||||    
T  34328812 aaatcagtcgctccgttaagttggtctgttaacggtggtgacgtgtaacgttaacctcttacaaggctagcttaccacgtcagatgccacgcaagcagg 34328714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 105; E-Value: 7e-52
Query Start/End: Original strand, 758 - 1002
Target Start/End: Complemental strand, 28813859 - 28813608
Alignment:
Q  758 attgaccaatacctcaaattcgtccttgaattttgaaaaa--tcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaa 855  Q
    |||||| ||||||||||||||||||||||||||  |||||  | || ||| | ||||| |||||||||||||| ||| | |||||||| |||||||||||    
T  28813859 attgactaatacctcaaattcgtccttgaatttaaaaaaaaattggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaatttacaaa 28813760  T
Q  856 atgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaag 954  Q
    |||| ||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||| |||| |||| ||||||||||| ||||| ||||||||    
T  28813759 atgtaaatcaaatcagtccctccgttaaattggtgtgttaacggaggtgacgtgtaacgttaacctcttacaaggcttaccacgttagatgtcacgcaag 28813660  T
Q  955 cag-gacc-aactga-tgatttaca-caaatttccaatgaccaaattgatga 1002  Q
    ||| |||| || ||| |||||||||  ||||| |||| ||||||||||||||    
T  28813659 cagcgaccaaattgattgatttacagaaaattgccaaggaccaaattgatga 28813608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 758 - 1002
Target Start/End: Original strand, 32134228 - 32134482
Alignment:
Q  758 attgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaat 857  Q
    |||||| ||||||||||||| ||| ||||||||| |||||||   ||| | ||||  |||||||||  ||| ||| | |||||||| ||||||| |||||    
T  32134228 attgactaatacctcaaatttgtcattgaattttcaaaaatcaaccaaattcgtctttgaattttgtaaaatatctatttagtccctgaatttataaaat 32134327  T
Q  858 gtcaatcaaatcagtccctccgttaagtt-----ggtctgttaacggaggtgacttgtaacgttaac-tctgacaaagcttaccacgtcagatgccacgc 951  Q
    ||||||||||||||||  || ||||||||     |||||||||||||||||||| |||||||||||| ||| |||||||||| |||||||||||||||||    
T  32134328 gtcaatcaaatcagtctatctgttaagttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaagcttatcacgtcagatgccacgc 32134427  T
Q  952 aagcagg-accaact-gat-gatttacacaaattt-ccaatgaccaaattgatga 1002  Q
    ||||||| ||||| | ||| |||||||| ||| || |||| ||||||||||||||    
T  32134428 aagcagggaccaaattgattgatttacagaaaattgccaaggaccaaattgatga 32134482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 765 - 956
Target Start/End: Original strand, 41493848 - 41494040
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    |||||||||| |||||||||||||||| ||||||| | ||| | |||||   ||||||| |||| ||| | |||||||  |||| | |||||||||||||    
T  41493848 aatacctcaacttcgtccttgaattttcaaaaatcagccaaattcgtcctcaaattttgtgaaatatctatttagtccatgaatattcaaaatgtcaatc 41493947  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaact-ctgacaaagcttaccacgtcagatgccacgcaagca 956  Q
    ||||| |||| ||||||||||||| |||||||||||| |||| |||| |||||||| || |||| ||| ||||| ||||||| ||| ||||||    
T  41493948 aaatccgtccatccgttaagttggcctgttaacggagatgacgtgtaccgttaactgcttacaaggctcaccacatcagatgtcacacaagca 41494040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 765 - 880
Target Start/End: Original strand, 40780554 - 40780669
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||| | ||||||||||||||||||||||| ||||| |||||||||||||| ||||| |||||||||||||| ||||||   ||| ||| |||    
T  40780554 aatacctcaaaatagtccttgaattttgaaaaatcggacaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcaaacgtccatc 40780653  T
Q  865 aaatcagtccctccgt 880  Q
    ||||||||||||||||    
T  40780654 aaatcagtccctccgt 40780669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 760 - 850
Target Start/End: Complemental strand, 24541337 - 24541247
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    |||| ||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||| ||||||    
T  24541337 tgactaatacctcaaattcgtcattgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 24541247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 765 - 850
Target Start/End: Complemental strand, 2854446 - 2854362
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||| ||||||    
T  2854446 aatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcg-aaaatcaaattagtccctgaattt 2854362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 765 - 880
Target Start/End: Complemental strand, 29621901 - 29621786
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||| | ||| ||||||||||||||||||| ||||| |||||||||||||| ||||| |||||||||||||| ||||||   | | ||| |||    
T  29621901 aatacctcaaaatagtcattgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatc 29621802  T
Q  865 aaatcagtccctccgt 880  Q
    ||||||||||||||||    
T  29621801 aaatcagtccctccgt 29621786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 756 - 850
Target Start/End: Original strand, 17574313 - 17574407
Alignment:
Q  756 ttattgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||| ||| | |||||||||||||||||||| ||| | |||||||| ||||||    
T  17574313 ttattgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 17574407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 765 - 880
Target Start/End: Complemental strand, 42473727 - 42473612
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||| | ||||||||||||||||||||||| ||||| |||||||||||| | ||||| |||||| ||||||| ||||||   | | ||| |||    
T  42473727 aatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattttacagacgtccatc 42473628  T
Q  865 aaatcagtccctccgt 880  Q
    |||||||||| |||||    
T  42473627 aaatcagtccttccgt 42473612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 840 - 949
Target Start/End: Complemental strand, 27077477 - 27077367
Alignment:
Q  840 tcccagaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacg 938  Q
    |||| |||||||| |||||||||||||||| ||||||||||||||||||  |||||| ||||||||| ||||  ||||| |||| |||| |||| ||| |    
T  27077477 tccctgaatttaccaaatgtcaatcaaatcggtccctccgttaagttggcatgttaatggaggtgacgtgtactgttaacctctcacaaggcttgccatg 27077378  T
Q  939 tcagatgccac 949  Q
    |||||||||||    
T  27077377 tcagatgccac 27077367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 765 - 850
Target Start/End: Complemental strand, 36057733 - 36057648
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    ||||||||||||||||||||||||||| ||||||||| ||| | |||||||||||||||||||| ||| | |||| ||| ||||||    
T  36057733 aatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagaccctgaattt 36057648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 760 - 850
Target Start/End: Original strand, 8539674 - 8539764
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    |||| |||||||||||||||||||||||||||||||||||  |||| | ||| | |||||||||||||| ||| | |||||||| ||||||    
T  8539674 tgactaatacctcaaattcgtccttgaattttgaaaaatcaatcaaattcgttcttgaattttgcgaaatatctatttagtccctgaattt 8539764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 765 - 850
Target Start/End: Original strand, 2179791 - 2179876
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    ||||||||||||| ||||||||||||| ||||||||||||| | ||||||||||||||| |||| ||| | ||| |||| ||||||    
T  2179791 aatacctcaaatttgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgtgaaatatctatttaatccctgaattt 2179876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 765 - 850
Target Start/End: Original strand, 7267847 - 7267932
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    ||||||||||||||||||||||||||| ||||||||  ||| | |||| ||||||||||||||| ||| | |||||||| ||||||    
T  7267847 aatacctcaaattcgtccttgaattttaaaaaatcgtccaaattcgtcactgaattttgcgaaatatctatttagtccctgaattt 7267932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 756 - 850
Target Start/End: Original strand, 34327630 - 34327724
Alignment:
Q  756 ttattgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    |||| ||| |||||||||||||||||||||||||||  ||||| || ||| | |||| ||||||||||||||| ||| | |||||||| ||||||    
T  34327630 ttatagactaatacctcaaattcgtccttgaattttctaaaattggccaaattcgtcgctgaattttgcgaaatatctatttagtccctgaattt 34327724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 931 - 1012
Target Start/End: Original strand, 24539933 - 24540019
Alignment:
Q  931 ttaccacgtcagatgccacgcaagca-ggacc-aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||||||||||||||||||||||||| ||||| |||||| |||||||||| |||||| ||| |||||||||||| ||||||||||||    
T  24539933 ttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaattttcaaggaccaaattgatggatttacacaaa 24540019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 766 - 842
Target Start/End: Complemental strand, 30468399 - 30468323
Alignment:
Q  766 atacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcc 842  Q
    ||||||||| |||||||||||||||| |||||| |||||| | |||| || |||||||||||| ||| | |||||||    
T  30468399 atacctcaatttcgtccttgaattttaaaaaattggtcaaattcgtctctcaattttgcgaaatatctatttagtcc 30468323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 700 - 760
Target Start/End: Original strand, 20700258 - 20700318
Alignment:
Q  700 agccttatcccatgcttcaggaagtacttttgatgtaatttctcctagtattgctattatt 760  Q
    ||||||||||||||||||| | |||||||||||||||||| ||  | ||||||||| ||||    
T  20700258 agccttatcccatgcttcacgcagtacttttgatgtaattcctttttgtattgctactatt 20700318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 798 - 866
Target Start/End: Original strand, 42619326 - 42619394
Alignment:
Q  798 tcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatcaa 866  Q
    |||||||||| ||||||| |||| ||||||| ||||| ||| |||||||||||   |||||||||||||    
T  42619326 tcggtcaatttcgtccctcaattatgcgaaatatcaatttaatcccagaatttgttaaatgtcaatcaa 42619394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 771 - 850
Target Start/End: Complemental strand, 43492212 - 43492133
Alignment:
Q  771 tcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    |||||||||| ||| |||||| ||||||| | ||| | | |||||||||||||||||| ||| | |||||||| ||||||    
T  43492212 tcaaattcgtacttaaattttcaaaaatcagccaagttcatccctgaattttgcgaaatatctatttagtccctgaattt 43492133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 673 - 739
Target Start/End: Original strand, 14810360 - 14810426
Alignment:
Q  673 cggtagcgctcatgctctcacatgagcagccttatcccatgcttcaggaagtacttttgatgtaatt 739  Q
    ||||||||||||||||||  || ||| ||||||||| |||||||||   | ||||||||||||||||    
T  14810360 cggtagcgctcatgctcttgcacgagaagccttatctcatgcttcacacaatacttttgatgtaatt 14810426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 771 - 880
Target Start/End: Complemental strand, 1344895 - 1344786
Alignment:
Q  771 tcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatcaaatca 870  Q
    |||| ||||||| |||||||  |  |||||||||| |  |||||  |||||| ||||| |||||| ||||||  ||||||  |||||||||||||| | |    
T  1344895 tcaatttcgtccctgaatttgcatgaatcggtcaaatttgtcccccaattttacgaaatatcaaaatagtccttgaatttgtaaaatgtcaatcaattta 1344796  T
Q  871 gtccctccgt 880  Q
    ||||||||||    
T  1344795 gtccctccgt 1344786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 176; Significance: 3e-94; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 176; E-Value: 3e-94
Query Start/End: Original strand, 759 - 1012
Target Start/End: Original strand, 26223585 - 26223844
Alignment:
Q  759 ttgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatg 858  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  26223585 ttgactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatg 26223684  T
Q  859 tcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca- 956  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||     
T  26223685 tcaatcaaattagtccctccattaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcag 26223784  T
Q  957 ggacc-aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    ||||| |||||| ||||||| || |||||||||| |||||||||||| ||||||||||||    
T  26223785 ggaccaaactgattgatttaaacaaaatttccaaggaccaaattgatggatttacacaaa 26223844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 165; E-Value: 1e-87
Query Start/End: Original strand, 765 - 1012
Target Start/End: Original strand, 8167946 - 8168198
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||| |||||||||||||| |||| |||||||||||||||    
T  8167946 aatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtctctgaattttgcgaaatatcaaattagtccctgaatgtacaaaatgtcaatc 8168045  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcaggacc-a 962  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||| |||||| |    
T  8168046 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagtaggaccaa 8168145  T
Q  963 actga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    ||||| |||||||||| ||||||| || ||| |||||||| ||||||||||||    
T  8168146 actgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaa 8168198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 163; E-Value: 2e-86
Query Start/End: Original strand, 765 - 958
Target Start/End: Original strand, 46582014 - 46582208
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  46582014 aatacctcaaatttgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatc 46582113  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  46582114 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagg 46582208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 162; E-Value: 7e-86
Query Start/End: Original strand, 758 - 1012
Target Start/End: Complemental strand, 27089371 - 27089111
Alignment:
Q  758 attgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaat 857  Q
    |||||| |||||||||||||||||||||||||||||||||||||  |||| ||||| ||||||||| |||| ||||||||| |||| |||||||||||||    
T  27089371 attgactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccttgaattttgtgaaatatcaaattaatccctgaatttacaaaat 27089272  T
Q  858 gtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca 956  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  27089271 gtcaatcaaatcagtccttccgttaagttggtttgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgttagatgccacgcaagca 27089172  T
Q  957 gga--ccaactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||  | |||||| |||||||||| ||||||||||||||||||||||| ||||||||||||    
T  27089171 ggaaccaaactgattgatttacacaaaatttccaatgaccaaattgatggatttacacaaa 27089111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 162; E-Value: 7e-86
Query Start/End: Original strand, 765 - 1012
Target Start/End: Complemental strand, 37346047 - 37345794
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||||||||||||  ||||| | |||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  37346047 aatacctcaaattcgtccttgaattttgaaaaatcgaccaatttcatccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatc 37345948  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-ggacc- 961  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||     
T  37345947 aaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaatgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggacca 37345848  T
Q  962 aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||||| ||| |||||| |||||||||| |||||||||||| ||||||||||||    
T  37345847 aactgattgacttacacaaaatttccaaggaccaaattgatggatttacacaaa 37345794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 161; E-Value: 3e-85
Query Start/End: Original strand, 754 - 1012
Target Start/End: Original strand, 25276735 - 25276999
Alignment:
Q  754 tattattgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttaca 853  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||| ||||| | ||| |||||||||||||| |||||||||||||| |||||||||    
T  25276735 tatttttgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccttgaattttgcgaaatatcaaattagtccctgaatttaca 25276834  T
Q  854 aaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgca 952  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||    
T  25276835 aaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaatgttaacctctgacaaagcttaccacgtcagatgccacgca 25276934  T
Q  953 agca-ggacc-aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    || | ||||| |||||| |||||||||| ||||||| || ||| |||||||| ||||||||||||    
T  25276935 agtagggaccaaactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaa 25276999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 158; E-Value: 2e-83
Query Start/End: Original strand, 765 - 1001
Target Start/End: Original strand, 4854414 - 4854655
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||    
T  4854414 aatacttcaaattcgtccttgaattttgaaaaatcgttcaatttcgtccctgaattttgcgaaagatcaaattagtccctgaatttacaaaatttcaatc 4854513  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-ggacc- 961  Q
    ||||||||| |||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||     
T  4854514 aaatcagtcactccgttaagttggtctgttaacggaggtgatgtgtaacgttaacctctgacaaagcttaccacgtcatatgccacgcaagcagggacca 4854613  T
Q  962 aactga-tgatttacac-aaatttccaatgaccaaattgatg 1001  Q
    |||||| |||||||||| |||||||||| |||||||||||||    
T  4854614 aactgattgatttacacaaaatttccaaggaccaaattgatg 4854655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 154; E-Value: 4e-81
Query Start/End: Original strand, 765 - 1001
Target Start/End: Original strand, 34776573 - 34776814
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||| |||||||||||||| ||||||||||||| ||||||    
T  34776573 aatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttacaaaatttcaatc 34776672  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-ggacc- 961  Q
    | |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||  ||||||||| |||||     
T  34776673 agatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaacacgtcagatgaaacgcaagcagggacca 34776772  T
Q  962 aactga-tgatttacac-aaatttccaatgaccaaattgatg 1001  Q
    |||||| |||||||||| |||||||||| |||||||||||||    
T  34776773 aactgattgatttacacaaaatttccaaggaccaaattgatg 34776814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 765 - 1012
Target Start/End: Complemental strand, 8169653 - 8169400
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| | ||| |||||||||||||| ||||||||||||||||||||    
T  8169653 aatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacaaaatatcaaattagtccctgaatttacaaaatgtcaatc 8169554  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-ggacc- 961  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||| ||||||| |||| |||||||||||||||||||||| |||||||||| |||||     
T  8169553 aaatcaatccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctaacaaagcttaccacgtcagatgtcacgcaagcagggacca 8169454  T
Q  962 aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||||| ||||| |||| ||||||| || ||| |||||||| ||||||||||||    
T  8169453 aactgattgattcacacaaaatttcgaaggacgaaattgatggatttacacaaa 8169400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 758 - 1012
Target Start/End: Original strand, 9120036 - 9120296
Alignment:
Q  758 attgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaat 857  Q
    |||||| ||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||| |||||||||||||    
T  9120036 attgactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaat 9120135  T
Q  858 gtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca 956  Q
    ||||||||||| |||||||||||||| |||||| |||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||| ||||||||||    
T  9120136 gtcaatcaaattagtccctccgttaatttggtccgttaacgggggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgacacgcaagca 9120235  T
Q  957 -ggacc-aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
     ||||| |||||| |||||||||| ||||||  || ||| |||||||| ||||||||||||    
T  9120236 gggaccaaactgattgatttacacaaaattttgaaggacgaaattgatggatttacacaaa 9120296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 772 - 1001
Target Start/End: Original strand, 33599229 - 33599463
Alignment:
Q  772 caaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatcaaatcag 871  Q
    |||||||||||||||||||||||||||||||||| | ||||| |||||||||||||| ||||||||| || | |||||||||||||||||||||||||||    
T  33599229 caaattcgtccttgaattttgaaaaatcggtcaaattcgtccatgaattttgcgaaatatcaaattaatctctgaatttacaaaatgtcaatcaaatcag 33599328  T
Q  872 tccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-ggacc-aactga- 967  Q
    ||||||| ||||||||||||||||||||||||||| |||||| |||| |||| ||||| |||||||||||| |||||||||||||| ||||| ||||||     
T  33599329 tccctccattaagttggtctgttaacggaggtgacgtgtaactttaacctcttacaaaacttaccacgtcatatgccacgcaagcagggaccaaactgat 33599428  T
Q  968 tgatttacac-aaatttccaatgaccaaattgatg 1001  Q
    |||||||||| |||||||||| |||||||||||||    
T  33599429 tgatttacacaaaatttccaaggaccaaattgatg 33599463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 765 - 1012
Target Start/End: Original strand, 47011460 - 47011713
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||| | ||||||||||||||||||||||| ||||| ||||| |||||||| ||||| |||||||||||||| |||||||||||| |||||||    
T  47011460 aatacctcaaaatagtccttgaattttgaaaaatcggacaatttcgtccatgaatttttcgaaatatcaaattagtccctgaatttacaaaaagtcaatc 47011559  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-ggacc- 961  Q
    || |||||||||||||||| |||| ||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||     
T  47011560 aactcagtccctccgttaatttggcctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggacca 47011659  T
Q  962 aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||||| |||||||||| ||||||| || ||| |||||||| ||||||||||||    
T  47011660 aactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaa 47011713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 765 - 1012
Target Start/End: Complemental strand, 1444266 - 1444013
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||| | |||||| |||||||||||||||| |||||  ||||||||||||| | ||| |||||||||||||| ||||||||||||||||||||    
T  1444266 aatacctcaaaatagtccttaaattttgaaaaatcggccaattttgtccctgaatttttcaaaatatcaaattagtccctgaatttacaaaatgtcaatc 1444167  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-ggacc- 961  Q
    |||| |||||||||||||| |||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||     
T  1444166 aaattagtccctccgttaatttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggacca 1444067  T
Q  962 aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||||| |||||||||| ||||||  || ||| |||||||| ||||||||||||    
T  1444066 aactgattgatttacacaaaattttgaaggacgaaattgatggatttacacaaa 1444013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 759 - 957
Target Start/End: Original strand, 31236817 - 31237016
Alignment:
Q  759 ttgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatg 858  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||| |  ||||||||||||||||||| ||| | ||||| || |||||||||||||     
T  31236817 ttgactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaatttgtccctgaattttgcgaaatatctatttagttcctgaatttacaaaata 31236916  T
Q  859 tcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcag 957  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| | || |||| |||||||||||||||| ||||||||||||    
T  31236917 tcaatcaaatcagtccctccgttaagttggtctgttaatggaggtgacgtgtaacgttaaccgcttacaaggcttaccacgtcagataccacgcaagcag 31237016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 110; E-Value: 7e-55
Query Start/End: Original strand, 765 - 957
Target Start/End: Original strand, 3011859 - 3012052
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    |||||||||||||||||||| |||||| ||||||| ||||| | ||| |||||||||||||||| ||| | |||||| | ||||||||||||||||||||    
T  3011859 aatacctcaaattcgtccttaaattttaaaaaatcagtcaaattcgttcctgaattttgcgaaatatctatttagtctctgaatttacaaaatgtcaatc 3011958  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcag 957  Q
    |||||||||| |||||||||||||||| ||||||||| |||| ||||||||||| |||| |||| ||||| |||||||||| ||||||||||||    
T  3011959 aaatcagtccatccgttaagttggtctattaacggagatgacgtgtaacgttaacctcttacaaggcttatcacgtcagataccacgcaagcag 3012052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 765 - 958
Target Start/End: Complemental strand, 2871161 - 2870967
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    |||| |||||||||||||||||||||| |||||||||  || | |||||||||||||||||||| | | | || |||   ||||||||||||||||||||    
T  2871161 aatatctcaaattcgtccttgaatttttaaaaatcggctaaattcgtccctgaattttgcgaaatagctattttgtctttgaatttacaaaatgtcaatc 2871062  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    ||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| |||| |||| ||||||||||||||||||||| ||||||||    
T  2871061 aaatcagtccctccgttaagttgctctgttaacggaagtgacgtgtaacgttaacctcttacaaggcttaccacgtcagatgccacacaagcagg 2870967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 765 - 958
Target Start/End: Original strand, 51894571 - 51894765
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||| |||||||||| |||||||||| |||||| |||||| |  ||| ||||||||||||||| ||  | |||||||| ||||||||||||||||||||    
T  51894571 aatacatcaaattcgttcttgaattttaaaaaatgggtcaaatttgtctctgaattttgcgaaatatatatttagtccctgaatttacaaaatgtcaatc 51894670  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgtt-aactctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||| ||||  |||||||| ||||||||||||| ||||||    
T  51894671 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaatgttaaactcttacaagacttaccacatcagatgccacgccagcagg 51894765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 765 - 958
Target Start/End: Original strand, 52641892 - 52642086
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||| ||||||| | ||| | |||||||||||||||||||| ||  | |||||||   ||||||||||||||  |||    
T  52641892 aatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctgaattttgcgaaatatatatttagtcctcaaatttacaaaatgttcatc 52641991  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaac-tctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    ||||||||||||||||||||||||| | |||||||||||||| |||| ||||||| ||| ||||| |||||||||||||||||||| ||||||||    
T  52641992 aaatcagtccctccgttaagttggtatattaacggaggtgacatgtaccgttaacttcttacaaaacttaccacgtcagatgccacacaagcagg 52642086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 765 - 941
Target Start/End: Original strand, 50554167 - 50554344
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||  ||| | | | ||||| || |||||| |||||||||||||    
T  50554167 aatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgtaaaatagctatttagttcctgaatttgcaaaatgtcaatc 50554266  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtca 941  Q
    |||||||||||| |||||||||||||||||||||| |||||| ||||||||||| |||| |||  |||||||||||||    
T  50554267 aaatcagtcccttcgttaagttggtctgttaacgggggtgacgtgtaacgttaacctcttacatggcttaccacgtca 50554344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 834 - 958
Target Start/End: Original strand, 45044993 - 45045118
Alignment:
Q  834 aattagtcccagaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagctt 932  Q
    |||| ||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||| |||| |||| ||||    
T  45044993 aattcgtccctgaatttacaaaatgtcaatcaaattagtctctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggctt 45045092  T
Q  933 accacgtcagatgccacgcaagcagg 958  Q
    ||||||||||||||||||||||||||    
T  45045093 accacgtcagatgccacgcaagcagg 45045118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 760 - 954
Target Start/End: Complemental strand, 37088226 - 37088031
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgt 859  Q
    |||| |||||||||||||| |||||||||||| ||||||||| ||| | ||| |||||||||||||||| | | | || ||||   ||||||||||||||    
T  37088226 tgactaatacctcaaattcttccttgaattttaaaaaatcggccaaattcgttcctgaattttgcgaaatagctattttgtccttaaatttacaaaatgt 37088127  T
Q  860 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaag 954  Q
    |||||||||||||||||||||||||||||| ||||||||| | |||| ||||| ||||| |||| ||||  ||||||| |||||||||||| ||||    
T  37088126 caatcaaatcagtccctccgttaagttggtttgttaacggtgatgacgtgtaaagttaacctcttacaagacttaccaagtcagatgccacacaag 37088031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 765 - 941
Target Start/End: Original strand, 23577640 - 23577817
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||| |||||||| ||||| |||  ||||||||||| ||||| || || | |||||||||||| ||||||||||||   |||||| ||||||||||| |    
T  23577640 aatacatcaaattcatccttcaatcctgaaaaatcgggcaatttcgaccttcaattttgcgaaatatcaaattagtcaatgaatttgcaaaatgtcaacc 23577739  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtca 941  Q
    |||||||||| |||||||| |||| ||||||||||||||||| ||| ||||||| |||||||||||||||||||||||    
T  23577740 aaatcagtccgtccgttaaattggcctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtca 23577817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 831 - 953
Target Start/End: Original strand, 6816906 - 6817030
Alignment:
Q  831 tcaaattagtcccagaattta-caaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaa 928  Q
    ||||||| ||||| ||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||| ||||     
T  6816906 tcaaattcgtccctgaattttgcaaaatgtcaatcaaatcagtccctccattaagttggtctgttaacggaggtgacatgtaacgttaacctcttacaag 6817005  T
Q  929 gcttaccacgtcagatgccacgcaa 953  Q
    | |||||||||||||||||||||||    
T  6817006 ggttaccacgtcagatgccacgcaa 6817030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 760 - 850
Target Start/End: Complemental strand, 46583681 - 46583591
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||| ||||||    
T  46583681 tgactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattagtccctgaattt 46583591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 765 - 850
Target Start/End: Complemental strand, 33602764 - 33602679
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||| ||||||    
T  33602764 aatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgtgaaatatcaaattagtccctgaattt 33602679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 765 - 880
Target Start/End: Complemental strand, 47013202 - 47013087
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||| | ||||||||||||||||||||||| ||||| |||||||||||||| ||||| |||||||||||||| ||||||   ||| ||| |||    
T  47013202 aatacctcaaaatagtccttgaattttgaaaaatcggacaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcaaacgtccatc 47013103  T
Q  865 aaatcagtccctccgt 880  Q
    ||||||||||||||||    
T  47013102 aaatcagtccctccgt 47013087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 757 - 850
Target Start/End: Complemental strand, 4856094 - 4856001
Alignment:
Q  757 tattgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||| ||| | |||||||||||||||||||| |||||||||||||| ||||||    
T  4856094 tattgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattt 4856001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 765 - 850
Target Start/End: Complemental strand, 34778258 - 34778173
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    ||||||||||||||||||||||||||| ||||||||| ||| | |||||||||||||||||||| |||||||||||||| ||||||    
T  34778258 aatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattt 34778173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 765 - 880
Target Start/End: Complemental strand, 9121788 - 9121673
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||| | ||||||||||||||||||||||| ||||| ||||||| |||||| ||||| |||||||||||||| ||||||   | | ||| |||    
T  9121788 aatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatc 9121689  T
Q  865 aaatcagtccctccgt 880  Q
    ||||||||||||||||    
T  9121688 aaatcagtccctccgt 9121673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 757 - 828
Target Start/End: Complemental strand, 25278496 - 25278425
Alignment:
Q  757 tattgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaa 828  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||    
T  25278496 tattgactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaa 25278425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 765 - 841
Target Start/End: Original strand, 2869583 - 2869659
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtc 841  Q
    ||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||| ||| | ||||||    
T  2869583 aatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtc 2869659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 759 - 850
Target Start/End: Original strand, 27087281 - 27087372
Alignment:
Q  759 ttgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    ||||| |||||||||||||||||||| |||||| ||||||||||||| |  ||||||||||||||||||| ||| | |||||||| ||||||    
T  27087281 ttgactaatacctcaaattcgtccttaaattttaaaaaatcggtcaaatttgtccctgaattttgcgaaatatctatttagtccctgaattt 27087372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 765 - 828
Target Start/End: Original strand, 37344346 - 37344409
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaa 828  Q
    ||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||    
T  37344346 aatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaa 37344409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 758 - 850
Target Start/End: Complemental strand, 31238622 - 31238530
Alignment:
Q  758 attgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    |||||| ||||||||||||| ||||||||||||| ||||||||| ||| |  ||||||||||||||||||| ||| | |||||||| ||||||    
T  31238622 attgactaatacctcaaatttgtccttgaattttaaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattt 31238530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 765 - 824
Target Start/End: Original strand, 6816869 - 6816928
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgc 824  Q
    ||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||    
T  6816869 aatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgc 6816928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 760 - 850
Target Start/End: Complemental strand, 3013601 - 3013511
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    |||| ||||||||||||||||||||||||||| ||| ||| ||||| | ||||| |||||||||||||| ||| | |||||||| ||||||    
T  3013601 tgactaatacctcaaattcgtccttgaattttaaaacatcagtcaaattcgtccatgaattttgcgaaatatctatttagtccctgaattt 3013511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 758 - 841
Target Start/End: Original strand, 25278851 - 25278934
Alignment:
Q  758 attgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtc 841  Q
    |||||| |||||||||||||| |||||||||||| ||||||| ||||| |  ||||||||||||||||||| ||| | ||||||    
T  25278851 attgactaatacctcaaattcatccttgaattttcaaaaatcagtcaaatttgtccctgaattttgcgaaatatctatttagtc 25278934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 760 - 850
Target Start/End: Complemental strand, 25279078 - 25278988
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    |||| ||||||||||||||||||||||||||| ||||||| | ||| | ||| ||| |||||||||||| ||| | |||||||| ||||||    
T  25279078 tgactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgttcctaaattttgcgaaatatctatttagtccctgaattt 25278988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 765 - 823
Target Start/End: Original strand, 33599191 - 33599249
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttg 823  Q
    ||||||||||||||||||||||||||||||||||||| ||| | ||||| |||||||||    
T  33599191 aatacctcaaattcgtccttgaattttgaaaaatcgggcaaattcgtccttgaattttg 33599249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 766 - 880
Target Start/End: Complemental strand, 51896271 - 51896157
Alignment:
Q  766 atacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatca 865  Q
    ||||||||||| ||||||| |||||| ||||||| ||||| |  ||||||||||||||||||| ||| | |||||||| ||||||   | ||||| ||||    
T  51896271 atacctcaaatccgtccttaaattttaaaaaatcagtcaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacagatgtccatca 51896172  T
Q  866 aatcagtccctccgt 880  Q
    ||  |||||||||||    
T  51896171 aaatagtccctccgt 51896157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 765 - 850
Target Start/End: Complemental strand, 52643735 - 52643650
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    |||||||||||||||||||| |||||| ||||||| || || | |||||||||||||||||||| ||  | |||||||| ||||||    
T  52643735 aatacctcaaattcgtccttaaatttttaaaaatcagttaaattcgtccctgaattttgcgaaatatttatttagtccctgaattt 52643650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 765 - 824
Target Start/End: Original strand, 1442554 - 1442613
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgc 824  Q
    ||||||||| | | ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  1442554 aatacctcacaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattttgc 1442613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 845 - 911
Target Start/End: Original strand, 3369514 - 3369580
Alignment:
Q  845 gaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgta 911  Q
    |||||||| | |||||||||||||  ||| |||||||||||||| ||||||||||||||||| ||||    
T  3369514 gaatttaccacatgtcaatcaaattcgtcactccgttaagttggcctgttaacggaggtgacatgta 3369580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 760 - 850
Target Start/End: Complemental strand, 6818803 - 6818713
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    |||| ||||||||||||||||||||||||||| ||||||||| |||   |||||||| |||| || ||| ||| | |||||||| ||||||    
T  6818803 tgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaactcgtccctggatttagcaaaatatctatttagtccctgaattt 6818713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 759 - 821
Target Start/End: Original strand, 45044947 - 45045009
Alignment:
Q  759 ttgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattt 821  Q
    ||||| ||||||||||||||||||||||||||| |||||| |||| | | |||||||||||||    
T  45044947 ttgactaatacctcaaattcgtccttgaattttaaaaaattggtccaattcgtccctgaattt 45045009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 765 - 843
Target Start/End: Complemental strand, 50556217 - 50556139
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtccc 843  Q
    |||| |||||||||||| ||||||||| ||||||| ||||| | |||| ||||||||||||||| ||| | ||||||||    
T  50556217 aatatctcaaattcgtctttgaattttaaaaaatcagtcaaattcgtctctgaattttgcgaaatatctatttagtccc 50556139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 926 - 1012
Target Start/End: Complemental strand, 20945013 - 20944922
Alignment:
Q  926 aaagcttaccacgtcagatgccacgcaagcagg--accaactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||||||||||||||||||||||||||||||||   | |||||| |||||||||| ||||||| || ||| |||||||| ||||||||||||    
T  20945013 aaagcttaccacgtcagatgccacgcaagcagggatcaaactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaa 20944922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 817 - 866
Target Start/End: Complemental strand, 51123590 - 51123541
Alignment:
Q  817 aattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatcaa 866  Q
    |||||||||||| ||||| || ||||| ||||||| ||||||||||||||    
T  51123590 aattttgcgaaatatcaatttcgtccctgaatttataaaatgtcaatcaa 51123541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 174; Significance: 5e-93; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 174; E-Value: 5e-93
Query Start/End: Original strand, 765 - 1012
Target Start/End: Complemental strand, 32518582 - 32518329
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  32518582 aatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatc 32518483  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-ggacc- 961  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||     
T  32518482 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaatgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggacca 32518383  T
Q  962 aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||||| |||||||||| |||||||||| |||||||||||| ||||||||||||    
T  32518382 aactgattgatttacacaaaatttccaaggaccaaattgatggatttacacaaa 32518329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 158; E-Value: 2e-83
Query Start/End: Original strand, 765 - 1012
Target Start/End: Complemental strand, 18645188 - 18644936
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||| |||||||||||||  ||||||||||||||||||||    
T  18645188 aatacctcaaattcgtccttgaattttgaaaaatcggacaattc-gtctctgaattttgcgaaatatcaaattagtccatgaatttacaaaatgtcaatc 18645090  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-ggacc- 961  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||| ||||| |||||||||| |||||     
T  18645089 aaatcagtccctccgttaagttggtctgttaacggaggtgacatgtaacgttaacctctgacaaaacttaccacgttagatgtcacgcaagcagggacca 18644990  T
Q  962 aactgat-gatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    ||||||| ||||||||| |||||||||| |||||||||||| ||||||||||||    
T  18644989 aactgatcgatttacacaaaatttccaaggaccaaattgatggatttacacaaa 18644936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 147; E-Value: 6e-77
Query Start/End: Original strand, 760 - 1012
Target Start/End: Complemental strand, 3480747 - 3480489
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgt 859  Q
    |||| ||||||||||| | ||||||||||||||||||||||| ||||| |||||||||||||| ||||| |||||| ||||||| |||||||||||||||    
T  3480747 tgactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaactagtccctgaatttacaaaatgt 3480648  T
Q  860 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-g 957  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||| |    
T  3480647 caatcaaattagtccctccgttaatttggtctgttaacggaggtgacgtgtcacgttaatctctgacaaagcttaccacgtcagatgccacgcaagcagg 3480548  T
Q  958 gacc-aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||| |||||| |||||||||| ||||||| || ||| |||||||| ||||||||||||    
T  3480547 gaccaaactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaa 3480489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 760 - 1012
Target Start/End: Original strand, 32454247 - 32454505
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgt 859  Q
    |||| ||||||||||| | ||||||||||||||||||||||| ||||| ||||| |||||||| ||||| |||||||||||||| |||||||||||||||    
T  32454247 tgactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccttgaatttttcgaaatatcaaattagtccctgaatttacaaaatgt 32454346  T
Q  860 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcag- 957  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||| ||| ||||||| |||| ||||||||||||||||||||||||||||||||||     
T  32454347 caatcaaattagtccctccgttaatttggtctgttaacggaggtgacgtgtcacgttaacctctaacaaagcttaccacgtcagatgccacgcaagcaga 32454446  T
Q  958 gacc-aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||| |||||| |||||||||| ||||||| || ||| |||| ||| ||||||||||||    
T  32454447 gaccaaactgattgatttacacaaaatttcgaaggacgaaatcgatagatttacacaaa 32454505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 127; E-Value: 5e-65
Query Start/End: Original strand, 765 - 958
Target Start/End: Complemental strand, 9400120 - 9399926
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||||||||||| ||||| | | ||| |||||||||||||| ||| |||||||||| ||||||||||||| ||||||    
T  9400120 aatacctcaaattcgtccttgaattttgaaaaatcagtcaaattcatccttgaattttgcgaaatatctaattagtccccgaatttacaaaatatcaatc 9400021  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    ||||||||| ||||||||||||||||||||||| |||||||| ||||||||||| |||| |||| ||||||||||| ||||||||||||||||||    
T  9400020 aaatcagtctctccgttaagttggtctgttaacagaggtgacgtgtaacgttaacctcttacaaggcttaccacgttagatgccacgcaagcagg 9399926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 127; E-Value: 5e-65
Query Start/End: Original strand, 760 - 953
Target Start/End: Original strand, 13610689 - 13610882
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgt 859  Q
    |||| ||||||| |||||||||||||||||||||||||||| |||| |  ||||||||||||||||||| ||||||||||||| | ||||||||||||||    
T  13610689 tgactaataccttaaattcgtccttgaattttgaaaaatcgatcaaatttgtccctgaattttgcgaaatatcaaattagtcc-ataatttacaaaatgt 13610787  T
Q  860 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaa 953  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | || |||| ||||||||||||||||| |||||||    
T  13610788 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaaccccttacaaggcttaccacgtcagatgacacgcaa 13610882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 115; E-Value: 7e-58
Query Start/End: Original strand, 765 - 957
Target Start/End: Complemental strand, 11357279 - 11357088
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||| ||||||||||||||||||||| ||||||||||||| | |||||||||||||||  ||| | ||| |||||||| ||||||||||||||||| ||    
T  11357279 aatacatcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgaaaaatagcaatttagtccctgaatttacaaaatgtcattc 11357180  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcag 957  Q
    ||||||||||||||||||||||||||||||||||||  |||| ||||||||||| |||| |||| ||||||||||||||||| |||||||||||    
T  11357179 aaatcagtccctccgttaagttggtctgttaacgga--tgacgtgtaacgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcag 11357088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 765 - 1001
Target Start/End: Complemental strand, 20525419 - 20525178
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||| ||||||||| |||||| |||||| | | |||||||||||||| ||| | | | || ||||  ||||||||||||||||||||    
T  20525419 aatacctcaaattcgtctttgaatttttaaaaataggtcaaattcatccctgaattttgcaaaatagctattttgtccttgaatttacaaaatgtcaatc 20525320  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-ggacc- 961  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||||| |||| |||| ||||||||||||||||||||| |||||| |||||     
T  20525319 aaatcagtccctccgttaagttggtctgttaacggaggtgacatgcaacgttaacctcttacaaggcttaccacgtcagatgccacacaagcagggacca 20525220  T
Q  962 aactga-tgatttacacaa-atttccaatgaccaaattgatg 1001  Q
    || ||| ||||||||| || ||| ||||||||||||||||||    
T  20525219 aattgattgatttacagaacattgccaatgaccaaattgatg 20525178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 110; E-Value: 7e-55
Query Start/End: Original strand, 765 - 957
Target Start/End: Complemental strand, 6902982 - 6902790
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||| ||||||| ||||| | ||||||| ||||||||||| | || | |||||||  |||||||||||||||| |||    
T  6902982 aatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccctaaattttgcgaata-tctatttagtcctcgaatttacaaaatgtccatc 6902884  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcag 957  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||| ||||  |||||||||||||||| |||||||||||    
T  6902883 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaccgttaacctcttacaagacttaccacgtcagatgtcacgcaagcag 6902790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 765 - 1012
Target Start/End: Original strand, 32437144 - 32437384
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||| ||| ||||||||||||||||||| ||||| ||||||||||||||||||||  |             |||||||||||||| |||||    
T  32437144 aatacctcaaatttgtcattgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaattt-------------gaatttacaaaatgccaatc 32437230  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-ggacc- 961  Q
    |||||| |||||||||||||||||| ||||||||||| |||| ||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||     
T  32437231 aaatcaatccctccgttaagttggtatgttaacggagatgacgtgtaacgttaacctctgacaaagcttaccacgtcagataccacgcaagcagggacca 32437330  T
Q  962 aactga-tgatttacacaa-atttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||||| |||||||||||| |||||| | |||||||||||| ||||||||||||    
T  32437331 aactgattgatttacacaacatttccgaggaccaaattgatggatttacacaaa 32437384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 765 - 956
Target Start/End: Original strand, 21068629 - 21068821
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||| || |||| ||||| | |||||   |||||| ||||| ||| | |||||||  ||||||||||||||||||||    
T  21068629 aatacctcaaattcgtccttgaattttcaacaatcagtcaaattcgtccacaaattttacgaaatatctatttagtcctcgaatttacaaaatgtcaatc 21068728  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca 956  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||  ||||| |||| |||| ||||||||||||||||  ||||||||||    
T  21068729 aaatcagtccctccgttaagttggcctgttaacggaggtgacgtgtactgttaatctcttacaaggcttaccacgtcagatatcacgcaagca 21068821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 765 - 958
Target Start/End: Complemental strand, 10570004 - 10569810
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||| ||||||| | ||| | ||||| |||||||||| ||| ||| | |||||||  |||||||||||||||| |||    
T  10570004 aatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccatgaattttgcaaaatatctatttagtcctcgaatttacaaaatgtccatc 10569905  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    |||||||||||||||| || |||||||||||||||||||||| ||||  ||||| |||| ||   |||||||| |||||||||||||||||||||    
T  10569904 aaatcagtccctccgtcaaattggtctgttaacggaggtgacgtgtactgttaacctcttacgtggcttaccatgtcagatgccacgcaagcagg 10569810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 759 - 958
Target Start/End: Original strand, 7371173 - 7371373
Alignment:
Q  759 ttgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatg 858  Q
    ||||| |||||||||| |||||||||||||||| ||||||||| ||| |  ||||||||||||||||||| |   | || ||||  ||||||| ||||||    
T  7371173 ttgactaatacctcaacttcgtccttgaattttcaaaaatcggccaaattggtccctgaattttgcgaaatagatattttgtccttgaatttataaaatg 7371272  T
Q  859 tcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcag 957  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||| |||||| |||| |||| | ||  ||||||||||||||| ||||||||||||    
T  7371273 tcaatcaaatcagtccctcctttaagttggtctgttaaaggaggtgacgtgtaacattaacctcttataagacttaccacgtcagataccacgcaagcag 7371372  T
Q  958 g 958  Q
    |    
T  7371373 g 7371373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 817 - 958
Target Start/End: Original strand, 33267117 - 33267259
Alignment:
Q  817 aattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgtt 916  Q
    |||||||||||| ||| | ||||| || ||||||| |||||||||||||||||||||| |||||||| |||| ||||||||||||||||| ||||  |||    
T  33267117 aattttgcgaaatatctatttagttcccgaatttataaaatgtcaatcaaatcagtccttccgttaaattggcctgttaacggaggtgacgtgtagtgtt 33267216  T
Q  917 aa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    || |||| |||| ||||||||||||||||||||||||||||||    
T  33267217 aacctcttacaaggcttaccacgtcagatgccacgcaagcagg 33267259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 760 - 958
Target Start/End: Complemental strand, 7051335 - 7051136
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgt 859  Q
    |||| ||||||| |||||||   ||||||||| ||||||| ||||| | |||| ||||||||||||||| ||| | ||||| |  ||||||| ||||| |    
T  7051335 tgactaataccttaaattcgaatttgaattttaaaaaatcagtcaaattcgtctctgaattttgcgaaatatctatttagtactcgaatttataaaatat 7051236  T
Q  860 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    | |  |||| ||||||||| ||||||||||||||||||||||||||| ||||  ||||| |||| |||| ||||||||||||||||| ||||||||||||    
T  7051235 ccactaaattagtccctccattaagttggtctgttaacggaggtgacgtgtactgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcagg 7051136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 836 - 956
Target Start/End: Original strand, 21091169 - 21091290
Alignment:
Q  836 ttagtcccagaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttac 934  Q
    |||||||| ||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||  ||||| |||| |||| ||||||    
T  21091169 ttagtccccgaatttataaaatgtcaatcaaatcagtccctccattaagttggcctgttaacggaggtgacgtgtactgttaatctcttacaaggcttac 21091268  T
Q  935 cacgtcagatgccacgcaagca 956  Q
    ||||||||||| ||||||||||    
T  21091269 cacgtcagatgtcacgcaagca 21091290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 760 - 880
Target Start/End: Complemental strand, 13613707 - 13613587
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgt 859  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||| ||||||   | | ||    
T  13613707 tgactaataccttaaattcgtccttgaattttgaaaaatcggtcaaattcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgt 13613608  T
Q  860 caatcaaatcagtccctccgt 880  Q
    | ||||||| |||||||||||    
T  13613607 ccatcaaattagtccctccgt 13613587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 817 - 958
Target Start/End: Original strand, 21045366 - 21045508
Alignment:
Q  817 aattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgtt 916  Q
    |||||| ||||| ||| | |||||||| |||||||||||||||||||||||||||||| ||||||||||| | ||| ||| ||||||||| ||||  |||    
T  21045366 aattttacgaaatatctatttagtccccgaatttacaaaatgtcaatcaaatcagtccatccgttaagttagcctggtaatggaggtgacgtgtactgtt 21045465  T
Q  917 aa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    || |||| |||| ||||||||||||||||  ||||||||||||    
T  21045466 aatctcttacaaggcttaccacgtcagatatcacgcaagcagg 21045508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 765 - 880
Target Start/End: Complemental strand, 32456011 - 32455896
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||| | ||||||   | | ||| |||    
T  32456011 aatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtcactgaattttgcagacgtccatc 32455912  T
Q  865 aaatcagtccctccgt 880  Q
    ||||||||||||||||    
T  32455911 aaatcagtccctccgt 32455896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 779 - 880
Target Start/End: Original strand, 3456766 - 3456867
Alignment:
Q  779 gtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatcaaatcagtccctcc 878  Q
    ||||||||||||||||||||||| ||||| |||||||||||||| ||||| |||||||||||||| ||||||   | | ||| |||||||||||||||||    
T  3456766 gtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctcc 3456865  T
Q  879 gt 880  Q
    ||    
T  3456866 gt 3456867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 845 - 957
Target Start/End: Original strand, 14337750 - 14337862
Alignment:
Q  845 gaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcaga 943  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| |||||||| |||||||| ||||   |||| |||| || |||||||||| ||||||    
T  14337750 gaatttacaaaatatcaatcaaatcagtccctccattaagttggcctgttaacagaggtgacatgtactattaacctcttac-aagcttaccatgtcaga 14337848  T
Q  944 tgccacgcaagcag 957  Q
    || |||||||||||    
T  14337849 tgtcacgcaagcag 14337862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 760 - 850
Target Start/End: Complemental strand, 32439216 - 32439126
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    |||| ||||||||||||| ||| ||||||||| ||||||||||||| | |||||||||||||||||||| ||| | |||||||| ||||||    
T  32439216 tgactaatacctcaaattagtcattgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 32439126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 754 - 822
Target Start/End: Original strand, 32516870 - 32516938
Alignment:
Q  754 tattattgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaatttt 822  Q
    |||| ||||| ||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||    
T  32516870 tatttttgactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaatttt 32516938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 765 - 850
Target Start/End: Complemental strand, 7373078 - 7372993
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    ||||||||||||||||  ||||||||| |||||| |||||| | |||||||||||||||||||| ||  | |||||||| ||||||    
T  7373078 aatacctcaaattcgtgattgaatttttaaaaattggtcaaattcgtccctgaattttgcgaaatatttatttagtccctgaattt 7372993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 765 - 822
Target Start/End: Original strand, 11355226 - 11355283
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaatttt 822  Q
    ||||||||||||||||||||||||||| ||||||||||||| | |||| |||||||||    
T  11355226 aatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtcactgaatttt 11355283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 765 - 850
Target Start/End: Original strand, 20523370 - 20523455
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    ||||| |||||||| |||| ||||||| ||||||||||||| | ||||| |||||||||||||| ||| | |||||||| ||||||    
T  20523370 aatacatcaaattcttcctagaattttcaaaaatcggtcaaattcgtccttgaattttgcgaaatatctatttagtccctgaattt 20523455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 765 - 880
Target Start/End: Original strand, 33276805 - 33276917
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    |||| ||||| |||||||||||||||| ||||||| ||||| | |||  || |||||||||||| ||| | ||||   | ||||||| ||||||||||||    
T  33276805 aataactcaacttcgtccttgaattttaaaaaatcagtcaaattcgtttctaaattttgcgaaatatctatttag---ctgaatttataaaatgtcaatc 33276901  T
Q  865 aaatcagtccctccgt 880  Q
    |||||||| |||||||    
T  33276902 aaatcagttcctccgt 33276917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 760 - 850
Target Start/End: Original strand, 10568398 - 10568488
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    |||| ||||| ||||||||||||||||||||| ||||||| ||||| | ||||| ||||||| |||||| ||  | |||||||| ||||||    
T  10568398 tgacgaatacatcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccttgaatttagcgaaatatttatttagtccctgaattt 10568488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 760 - 843
Target Start/End: Original strand, 6899484 - 6899567
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtccc 843  Q
    |||| ||||||||||||| ||||||||||||| ||||||| ||||| | |||| || ||||||| |||| ||| | ||||||||    
T  6899484 tgactaatacctcaaatttgtccttgaattttcaaaaatcagtcaaattcgtctctaaattttgtgaaatatctatttagtccc 6899567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 765 - 824
Target Start/End: Complemental strand, 8605410 - 8605351
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgc 824  Q
    ||||||||||||||||||||||||||| ||||||| | ||| | ||||||| ||||||||    
T  8605410 aatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctaaattttgc 8605351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 764 - 822
Target Start/End: Original strand, 7049789 - 7049847
Alignment:
Q  764 caatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaatttt 822  Q
    ||||| ||||||||| |||||||||||| ||||||| | ||| | ||||||||||||||    
T  7049789 caatatctcaaattcttccttgaattttcaaaaatcagccaaattcgtccctgaatttt 7049847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 765 - 799
Target Start/End: Original strand, 21091110 - 21091144
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatc 799  Q
    ||||||||||||||||||||||||||| |||||||    
T  21091110 aatacctcaaattcgtccttgaattttcaaaaatc 21091144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 171; Significance: 3e-91; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 171; E-Value: 3e-91
Query Start/End: Original strand, 760 - 1001
Target Start/End: Complemental strand, 51013976 - 51013730
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgt 859  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||| |||||| |||||||||||||||    
T  51013976 tgactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcaaaatatcaaatgagtccctgaatttacaaaatgt 51013877  T
Q  860 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-g 957  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |    
T  51013876 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagg 51013777  T
Q  958 gacc-aactga-tgatttacac-aaatttccaatgaccaaattgatg 1001  Q
    |||| |||||| | |||||||| |||||||||| |||||||||||||    
T  51013776 gaccaaactgattaatttacacaaaatttccaaggaccaaattgatg 51013730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 163; E-Value: 2e-86
Query Start/End: Original strand, 760 - 1012
Target Start/End: Original strand, 43507166 - 43507424
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgt 859  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  43507166 tgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgt 43507265  T
Q  860 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-g 957  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||| |||||||||| |    
T  43507266 caatcaaatcagtccctccgttaagttggactgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgtcacgcaagcagg 43507365  T
Q  958 gacc-aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||| |||||| |||||||||| ||||||| || ||| |||||||| ||||||||||||    
T  43507366 gaccaaactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaa 43507424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 162; E-Value: 7e-86
Query Start/End: Original strand, 765 - 1012
Target Start/End: Complemental strand, 43508738 - 43508485
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  43508738 aatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatc 43508639  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-ggacc- 961  Q
    |||||||||||||||||||||||| ||||||||| ||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||     
T  43508638 aaatcagtccctccgttaagttggcctgttaacgaaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggacca 43508539  T
Q  962 aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||||| |||||||||| ||||||| || ||| |||||||| ||||||||||||    
T  43508538 aactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaa 43508485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 158; E-Value: 2e-83
Query Start/End: Original strand, 765 - 1012
Target Start/End: Complemental strand, 4173825 - 4173572
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||| |||||||||||| |||||||    
T  4173825 aatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaacgtcaatc 4173726  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaac-tctgacaaagcttaccacgtcagatgccacgcaagca-ggacc- 961  Q
    || ||||||||||||||||||||| ||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||     
T  4173725 aactcagtccctccgttaagttggcctgttaacggaggtgacgtgtcacgttaacatctgacaaagcttaccacgtcagatgccacgcaagcagggacca 4173626  T
Q  962 aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||||| |||||||||| ||||||| || ||| |||||||| ||||||||||||    
T  4173625 aactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaa 4173572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 156; E-Value: 3e-82
Query Start/End: Original strand, 765 - 1012
Target Start/End: Original strand, 33264386 - 33264640
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||| || ||||||||||||||||||||    
T  33264386 aatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcaaaatatcaaattagttcctgaatttacaaaatgtcaatc 33264485  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-ggacc- 961  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||| ||||| |||||     
T  33264486 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgtaagcatggacca 33264585  T
Q  962 aactga-tgatttacacaaa--tttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||||| |||||||| ||||  |||| || ||| |||||||| ||||||||||||    
T  33264586 aactgattgatttacgcaaaattttcgaaggacgaaattgatggatttacacaaa 33264640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 154; E-Value: 4e-81
Query Start/End: Original strand, 765 - 1012
Target Start/End: Original strand, 319277 - 319530
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| || ||||||||||||||||||||    
T  319277 aatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaatttacaaaatgtcaatc 319376  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-ggacc- 961  Q
    ||| ||||||||||||||||||||||||||||| |||||||| ||| ||||||| |||||||||| |||||||||||||||| |||||||||| |||||     
T  319377 aaaccagtccctccgttaagttggtctgttaacagaggtgacgtgtcacgttaacctctgacaaaacttaccacgtcagatgtcacgcaagcagggacca 319476  T
Q  962 aactga-tgatttacac-aaatttccaatgaccaaattgatg-atttacacaaa 1012  Q
    |||||| |||||||||| ||||||| || ||| ||||||||| |||||||||||    
T  319477 aactgattgatttacacaaaatttcgaaggacgaaattgatgtatttacacaaa 319530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 147; E-Value: 6e-77
Query Start/End: Original strand, 760 - 1012
Target Start/End: Complemental strand, 320990 - 320732
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgt 859  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||| | ||| |||||||||||||| |||||||||||||  ||| |||||||||||    
T  320990 tgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccttgaattttgcgaaatatcaaattagtccttgaaattacaaaatgt 320891  T
Q  860 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-g 957  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||| |    
T  320890 caatcaactcagtccctccgttaagttggcctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagg 320791  T
Q  958 gacc-aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||| |||||| |||||||||| ||||||| || ||| |||||||| ||||||||||||    
T  320790 gaccaaactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaa 320732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 765 - 1012
Target Start/End: Complemental strand, 33266095 - 33265842
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    |||| ||||||||||| ||||||||||||||||||||  |||| ||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  33266095 aatatctcaaattcgttcttgaattttgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatc 33265996  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-ggacc- 961  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||     
T  33265995 aaatcagtccctccgttaagttagtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggacca 33265896  T
Q  962 aactga-tgatttaca-caaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||||| |||||||||  ||||||| || ||| |||||||| ||||||||||||    
T  33265895 aactgattgatttacataaaatttcgaaggacgaaattgatggatttacacaaa 33265842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 756 - 1012
Target Start/End: Original strand, 833218 - 833480
Alignment:
Q  756 ttattgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaa 855  Q
    |||||||| ||||||||||| | ||||||||||||||||||||||| ||||| |||||||||||| | ||||| |||||| ||||||| |||||||||||    
T  833218 ttattgactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaa 833317  T
Q  856 atgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaag 954  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||| ||| ||||||| |||||||||||| |||||||||||||||||||||||    
T  833318 atgtcaatcaaattagtccctccgttaaattggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcgtaccacgtcagatgccacgcaag 833417  T
Q  955 ca-ggacc-aactgatg-atttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    || ||||| || ||||| |||||||| ||||||| || ||| |||||||| ||||||||||||    
T  833418 cagggaccaaattgatgaatttacacaaaatttcgaaggactaaattgatggatttacacaaa 833480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 765 - 950
Target Start/End: Original strand, 4169690 - 4169876
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    |||||||||||||||||||||||||||||||||| | |||||| |||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  4169690 aatacctcaaattcgtccttgaattttgaaaaattgatcaatttcgtctctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatc 4169789  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacg 950  Q
    ||| |||||||||||||||||||||||||||| ||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||    
T  4169790 aaaccagtccctccgttaagttggtctgttaatggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacg 4169876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 137; E-Value: 5e-71
Query Start/End: Original strand, 766 - 1012
Target Start/End: Complemental strand, 43521193 - 43520941
Alignment:
Q  766 atacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatca 865  Q
    |||||||||||| || |||||||||||||||||| ||||||| |||   |||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  43521193 atacctcaaatttgttcttgaattttgaaaaatcagtcaatttcgtttttgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatca 43521094  T
Q  866 aatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-ggacc-a 962  Q
    ||||||| | |||||||||||| |||||||||| ||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||| |    
T  43521093 aatcagttcttccgttaagttgttctgttaacgtaggtgacgtgttacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaa 43520994  T
Q  963 actga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    ||||| |||||||||| |||||| ||| |||||||||||| ||||||||||||    
T  43520993 actgattgatttacacaaaattttcaaggaccaaattgatggatttacacaaa 43520941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 135; E-Value: 9e-70
Query Start/End: Original strand, 760 - 1012
Target Start/End: Complemental strand, 5439737 - 5439479
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgt 859  Q
    |||| ||||||||||| | ||||||||||||||||||||||| ||||| |||||||||||| | ||||| |||||| ||||||| |||||||||||||||    
T  5439737 tgactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgt 5439638  T
Q  860 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-g 957  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||| ||| ||||||| |||||||||||| ||||||||||||||||||||||||| |    
T  5439637 caatcaaattagtccctccgttaaattggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcgtaccacgtcagatgccacgcaagcagg 5439538  T
Q  958 gacc-aactgat-gatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||| || |||| ||||||||| ||||||| || ||| |||||||| ||||||||||||    
T  5439537 gaccaaattgatggatttacacaaaatttcgaaggactaaattgatggatttacacaaa 5439479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 759 - 958
Target Start/End: Original strand, 35401747 - 35401947
Alignment:
Q  759 ttgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatg 858  Q
    ||||| ||||||||||||||||||||||||||| ||||||||| ||| | ||||||||||||||| |||| ||| | |||||||  ||||||||||||||    
T  35401747 ttgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgtgaaatatctatttagtccttgaatttacaaaatg 35401846  T
Q  859 tcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcag 957  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||||||    
T  35401847 tcaatcaaatcagtccctccgttaagctggtctgttaacggaggtgacgtgtaacgttaacctcttacaaaccttaccacgtcagatgccacgcaagcag 35401946  T
Q  958 g 958  Q
    |    
T  35401947 g 35401947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 127; E-Value: 5e-65
Query Start/End: Original strand, 760 - 1012
Target Start/End: Original strand, 5437810 - 5438068
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgt 859  Q
    |||| ||||||||||| | |||||||||||||||||||||||  |||| |||||||||||| | ||||| |||||| ||||||| |||||||||||||||    
T  5437810 tgactaatacctcaaaatagtccttgaattttgaaaaatcggcaaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgt 5437909  T
Q  860 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-g 957  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||| ||| ||||||| |||||||||||| || |||||||||||||||||||||| |    
T  5437910 caatcaaattagtccctccgttaaattggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcgtaacacgtcagatgccacgcaagcagg 5438009  T
Q  958 gacc-aactgat-gatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||| || |||| ||||||||| ||||||| || ||| |||||||| ||||||||||||    
T  5438010 gaccaaattgatggatttacacaaaatttcgaaggactaaattgatggatttacacaaa 5438068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 760 - 958
Target Start/End: Complemental strand, 49524823 - 49524624
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgt 859  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||| ||| | | | |||||||| |||||||||||||||    
T  49524823 tgactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaatttacaaaatgt 49524724  T
Q  860 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||| || | ||||||||||||| ||| ||||||||||||    
T  49524723 caatcaaatcagtccttccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttaccaggcttaccacgtcatatgtcacgcaagcagg 49524624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 760 - 1012
Target Start/End: Complemental strand, 835132 - 834874
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgt 859  Q
    |||| ||||||||||| | ||||||||||||||||||||||  |||||  ||||||||||| | ||||| |||||| ||||||| |||||||||||| ||    
T  835132 tgactaatacctcaaaatagtccttgaattttgaaaaatcgaccaattttgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaacgt 835033  T
Q  860 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-g 957  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||| ||| ||||||| |||||||||||| ||||||||||||||||||||||||| |    
T  835032 caatcaaattagtccctccgttaaattggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcgtaccacgtcagatgccacgcaagcagg 834933  T
Q  958 gacc-aactgat-gatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||| || |||| ||||||||| ||||||| || ||| |||||||| ||||||||||||    
T  834932 gaccaaattgatggatttacacaaaatttcgaaggactaaattgatggatttacacaaa 834874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 120; E-Value: 8e-61
Query Start/End: Original strand, 760 - 958
Target Start/End: Original strand, 20493826 - 20494025
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgt 859  Q
    |||| ||||||||||||||||| ||||||||| ||| ||||| ||| | ||| | |||||||||||||| ||| | ||||| || |||||||||||||||    
T  20493826 tgactaatacctcaaattcgtcattgaattttaaaatatcggccaaattcgttcttgaattttgcgaaatatctatttagttcctgaatttacaaaatgt 20493925  T
Q  860 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||| |||| ||||||||||||||||||||||||||||||    
T  20493926 caatcaaatcagtccctccgttaagttggtgtgttaacggaggtgacgtgtaacgttaacctcttacaaggcttaccacgtcagatgccacgcaagcagg 20494025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 115; E-Value: 7e-58
Query Start/End: Original strand, 760 - 958
Target Start/End: Original strand, 11254118 - 11254316
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgt 859  Q
    |||| ||||||||||||||||||||||||||| ||||||||| ||| |||||| || |||||||||||| | |   || ||||  |||||||||||||||    
T  11254118 tgacaaatacctcaaattcgtccttgaatttttaaaaatcggccaaatccgtctctaaattttgcgaaatagctcttttgtccttgaatttacaaaatgt 11254217  T
Q  860 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaactctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    |||||||||||||||||||||||||||||| |||||||||||||||  |||||||||| |||| |||| |||||||||||||||||||| |||||||||    
T  11254218 caatcaaatcagtccctccgttaagttggtttgttaacggaggtgatgtgtaacgttatctcttacaaggcttaccacgtcagatgccatgcaagcagg 11254316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 771 - 958
Target Start/End: Original strand, 39345574 - 39345762
Alignment:
Q  771 tcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatcaaatca 870  Q
    ||||||||||||||||||||| ||||||||| ||| | |||||||||||||||||||| | | | |||||||| ||||||||||||||||||||||||||    
T  39345574 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatagctatttagtccctgaatttacaaaatgtcaatcaaatca 39345673  T
Q  871 gtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    ||| ||||||||||||||| |||||||||||||||| ||||||||||| |||| |||| ||||||||| | ||||||||| ||||||||    
T  39345674 gtctctccgttaagttggtatgttaacggaggtgacgtgtaacgttaacctcttacaaggcttaccacataagatgccacacaagcagg 39345762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 765 - 958
Target Start/End: Original strand, 48645259 - 48645453
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||| ||||||| ||||| | ||||| |||||||||||||| ||| | |||||||  |||||||||||||||  |||    
T  48645259 aatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccatgaattttgcgaaatatctatttagtcctcgaatttacaaaatgttcatc 48645358  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    |||||||| |||||||| | |||||||||||||| ||||||| ||||  ||||| |||| |||| ||||||||||||||||| ||||||||||||    
T  48645359 aaatcagtacctccgttcaattggtctgttaacgaaggtgacgtgtattgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcagg 48645453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 759 - 958
Target Start/End: Complemental strand, 42982543 - 42982343
Alignment:
Q  759 ttgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatg 858  Q
    ||||| ||||| | |||||  |||||||||||| ||||||| ||||| | |||||||||||||||||||| |   | || ||||  ||||||||||||||    
T  42982543 ttgactaatacgttaaatttttccttgaatttttaaaaatctgtcaaattcgtccctgaattttgcgaaatagttattttgtccttgaatttacaaaatg 42982444  T
Q  859 tcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgtt-aactctgacaaagcttaccacgtcagatgccacgcaagcag 957  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| | || | ||||  |||||||||||||||||||| |||||||    
T  42982443 tcaatcaaatcagtccctccgttaagttggtgtgttaacggaggtgacgtgtaacgttgaccttttacaagccttaccacgtcagatgccacacaagcag 42982344  T
Q  958 g 958  Q
    |    
T  42982343 g 42982343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 761 - 958
Target Start/End: Complemental strand, 54387970 - 54387774
Alignment:
Q  761 gaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtc 860  Q
    |||||||| || |||||||||||| |||||| ||||||| | ||| |  || ||| |||||||||||| ||| | |||||||  ||||||||||||||||    
T  54387970 gaccaatatcttaaattcgtccttaaatttttaaaaatcagccaaattagttcct-aattttgcgaaatatctatttagtcctcgaatttacaaaatgtc 54387872  T
Q  861 aatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
     ||||||||||| | ||||||||||||||||||||||||||||||  |||| |||||| |||| |||| ||||||||||||| ||||||||||||||||    
T  54387871 catcaaatcagttcatccgttaagttggtctgttaacggaggtga-gtgtaccgttaacctcttacaaggcttaccacgtcaaatgccacgcaagcagg 54387774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 765 - 880
Target Start/End: Original strand, 43519428 - 43519543
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||| ||||||   ||| ||| |||    
T  43519428 aatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacgtccatc 43519527  T
Q  865 aaatcagtccctccgt 880  Q
    ||||| ||||||||||    
T  43519528 aaatccgtccctccgt 43519543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 765 - 957
Target Start/End: Original strand, 20819989 - 20820176
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    |||||||||| |||||||||||||||| ||||||| ||||| |   | ||| |||||||| ||| ||  | |||||||| |||||| |||||||||||||    
T  20819989 aatacctcaacttcgtccttgaattttcaaaaatcagtcaaatttattcctaaattttgcaaaatatttatttagtccctgaattttcaaaatgtcaatc 20820088  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaactctgacaaagcttaccacgtcagatgccacgcaagcag 957  Q
    |||||||| | ||||||||||||| |||||||| |||||||| | ||||     | || |||| ||||||||| |||||| ||||||||||||    
T  20820089 aaatcagttcatccgttaagttggcctgttaacagaggtgacgtttaac-----cgcttacaaggcttaccacatcagataccacgcaagcag 20820176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 765 - 953
Target Start/End: Original strand, 2691378 - 2691566
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    |||||||||| ||| || ||||||||| ||||||| | ||| | |||||   |||||||| ||| ||| | |||||||| ||||||  ||||||||||||    
T  2691378 aatacctcaacttcatc-ttgaattttcaaaaatcagccaaattcgtccacaaattttgcaaaatatctatttagtccctgaatttttaaaatgtcaatc 2691476  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaa 953  Q
    |||||||||  ||||||||||||| ||||||| ||||||||  || | |||||| | || ||||  |||||||||||| |||||||||||    
T  2691477 aaatcagtcaatccgttaagttggcctgttaagggaggtgatgtgcatcgttaatcgcttacaagacttaccacgtcaaatgccacgcaa 2691566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 847 - 912
Target Start/End: Original strand, 41759492 - 41759557
Alignment:
Q  847 atttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaa 912  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||| |||||    
T  41759492 atttacaaaatgtcaatcaaatcagtcactccgttaagttggtctgtcaacagaggtgacgtgtaa 41759557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 765 - 850
Target Start/End: Complemental strand, 41761866 - 41761781
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    ||||||||||||||||||||||||||| ||||||||| ||| | ||||||  |||||||||||| ||| | |||||||| ||||||    
T  41761866 aatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtcccgaaattttgcgaaatatctatttagtccctgaattt 41761781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 765 - 850
Target Start/End: Original strand, 49523128 - 49523213
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    ||||||||||||||||| ||||||||| |||||||||  || | ||||| |||||||||||||| ||| | |||||||| ||||||    
T  49523128 aatacctcaaattcgtcattgaattttaaaaaatcggctaaattcgtccatgaattttgcgaaatatctatttagtccctgaattt 49523213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 674 - 760
Target Start/End: Complemental strand, 29575514 - 29575428
Alignment:
Q  674 ggtagcgctcatgctctcacatgagcagccttatcccatgcttcaggaagtacttttgatgtaatttctcctagtattgctattatt 760  Q
    |||||||||||||||||  || ||| ||||||||||||||||||| | |||||||||| ||||||| ||  | ||||||||| ||||    
T  29575514 ggtagcgctcatgctcttgcacgagaagccttatcccatgcttcacgcagtacttttgttgtaattcctttttgtattgctactatt 29575428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 760 - 850
Target Start/End: Original strand, 41781538 - 41781628
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    |||| ||||||||||||| || |||||||||| ||||||||||||| |  ||||||||||||||| ||| ||  | |||||||| ||||||    
T  41781538 tgactaatacctcaaatttgttcttgaattttaaaaaatcggtcaaatttgtccctgaattttgcaaaatatttatttagtccctgaattt 41781628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 765 - 850
Target Start/End: Original strand, 51011930 - 51012015
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    |||| |||||||||||||||||||||| ||||||||||||| | | | | |||||||||||||| ||| | |||||| | ||||||    
T  51011930 aatatctcaaattcgtccttgaattttaaaaaatcggtcaaattctttcttgaattttgcgaaatatctatttagtctctgaattt 51012015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 765 - 824
Target Start/End: Original strand, 48813791 - 48813850
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgc 824  Q
    ||||||||||||||||||||||||||| ||||||| | ||| |   ||||||||||||||    
T  48813791 aatacctcaaattcgtccttgaattttcaaaaatcagccaaatttatccctgaattttgc 48813850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 171; Significance: 3e-91; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 171; E-Value: 3e-91
Query Start/End: Original strand, 756 - 1012
Target Start/End: Original strand, 3150247 - 3150509
Alignment:
Q  756 ttattgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaa 855  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||    
T  3150247 ttatagactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaa 3150346  T
Q  856 atgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaag 954  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  3150347 atgtcaatcaaatcagtccctccattaagttggtctgttaacggatgtgacgtgtaacgttaacctctgacaaagattaccacgtcagatgccacgcaag 3150446  T
Q  955 cag-gacc-aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    | | |||| |||||| |||||||||| |||||||||| |||||||||||| ||||||||||||    
T  3150447 cggagaccaaactgattgatttacacaaaatttccaaggaccaaattgatggatttacacaaa 3150509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 169; E-Value: 4e-90
Query Start/End: Original strand, 758 - 1012
Target Start/End: Original strand, 53187739 - 53187999
Alignment:
Q  758 attgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaat 857  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||    
T  53187739 attgactaatacctcaaatttgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaat 53187838  T
Q  858 gtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca 956  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||     
T  53187839 gtcaatcaaatcagtccctccgttaagttgatctggtaacggaggtgacgtgtaacgttaacctctgacaaagattaccacgtcagatgccacgcaagcg 53187938  T
Q  957 g-gacc-aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    | |||| |||||| |||||||||| |||||||||| |||||||||||| ||||||||||||    
T  53187939 gagaccaaactgattgatttacacaaaatttccaaggaccaaattgatggatttacacaaa 53187999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 166; E-Value: 3e-88
Query Start/End: Original strand, 765 - 1012
Target Start/End: Complemental strand, 38193595 - 38193342
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  38193595 aatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatc 38193496  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-ggacc- 961  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||     
T  38193495 aaatcagtccatccgttaagttggtctgttaacggaggtgacatgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggacca 38193396  T
Q  962 aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||||| |||||||||| ||||||| || ||| |||||||| ||||||||||||    
T  38193395 aactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaa 38193342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 166; E-Value: 3e-88
Query Start/End: Original strand, 765 - 1012
Target Start/End: Original strand, 46308811 - 46309064
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  46308811 aatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatc 46308910  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-ggacc- 961  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||     
T  46308911 aaatcagtccctccgttaagttggcctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggacca 46309010  T
Q  962 aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||||| |||||||||| ||||||| || ||| |||||||| ||||||||||||    
T  46309011 aactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaa 46309064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 166; E-Value: 3e-88
Query Start/End: Original strand, 765 - 1012
Target Start/End: Complemental strand, 46310521 - 46310268
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  46310521 aatacctcaaattcgtctttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatc 46310422  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-ggacc- 961  Q
    ||| |||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||     
T  46310421 aaaccagtccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggacca 46310322  T
Q  962 aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||||| |||||||||| ||||||| || ||| |||||||| ||||||||||||    
T  46310321 aactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaa 46310268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 162; E-Value: 7e-86
Query Start/End: Original strand, 765 - 1001
Target Start/End: Complemental strand, 41979437 - 41979196
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||    
T  41979437 aatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatttcaatc 41979338  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-ggacc- 961  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||     
T  41979337 aaatcaatccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggacca 41979238  T
Q  962 aactga-tgatttacac-aaatttccaatgaccaaattgatg 1001  Q
    |||||| |||||||||| |||||| | | |||||||||||||    
T  41979237 aactgattgatttacacaaaattttcgaggaccaaattgatg 41979196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 162; E-Value: 7e-86
Query Start/End: Original strand, 765 - 1012
Target Start/End: Original strand, 53092627 - 53092880
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||| || ||||||||||||| || ||||| |||||||||||||||||||| ||||||||| |||| ||||||| ||||||||||||    
T  53092627 aatacctcaaattcgtctttaaattttgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaatttataaaatgtcaatc 53092726  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-ggacc- 961  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||     
T  53092727 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcagggacca 53092826  T
Q  962 aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||||| |||||||||| ||||||||||||||||||||||| ||||||||||||    
T  53092827 aactgattgatttacacaaaatttccaatgaccaaattgatggatttacacaaa 53092880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 162; E-Value: 7e-86
Query Start/End: Original strand, 765 - 1001
Target Start/End: Complemental strand, 54900159 - 54899918
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||    
T  54900159 aatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaatttgtccctgaatttacaaaatgtcaatc 54900060  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaac-tctgacaaagcttaccacgtcagatgccacgcaagcag-gacc- 961  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||     
T  54900059 aaatcagtccctccgttaagttggtatgttaacggaggtgacgtgtaacgttaacgtctgacaaagcttaccacgtcaaatgccacgcaagcagagacca 54899960  T
Q  962 aactga-tgatttacac-aaatttccaatgaccaaattgatg 1001  Q
    |||||| |||||||||| |||||| ||| |||||||||||||    
T  54899959 aactgattgatttacacaaaattttcaaggaccaaattgatg 54899918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 159; E-Value: 4e-84
Query Start/End: Original strand, 760 - 1012
Target Start/End: Complemental strand, 53094363 - 53094105
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgt 859  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  53094363 tgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgt 53094264  T
Q  860 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcag- 957  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||| |||||||||||     
T  53094263 caatcaaatgagtccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgtcacgcaagcagt 53094164  T
Q  958 gacc-aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||| |||||| ||||| |||| ||||||| || ||| |||||||| ||||||||||||    
T  53094163 gaccaaactgattgattcacacaaaatttcgaaggacgaaattgatggatttacacaaa 53094105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 154; E-Value: 4e-81
Query Start/End: Original strand, 765 - 1001
Target Start/End: Original strand, 7883332 - 7883573
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    |||||||||| |||||| ||||||||||||||||||| ||||| ||||||| ||||||| |||| ||||||||||| || ||||||||||||| ||||||    
T  7883332 aatacctcaatttcgtctttgaattttgaaaaatcggccaatttcgtccctaaattttgtgaaatatcaaattagttcctgaatttacaaaatttcaatc 7883431  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-ggacc- 961  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||     
T  7883432 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggacca 7883531  T
Q  962 aactga-tgatttacac-aaatttccaatgaccaaattgatg 1001  Q
    |||||| |||||||||| |||||||||| |||||||||||||    
T  7883532 aactgattgatttacacaaaatttccaaggaccaaattgatg 7883573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 154; E-Value: 4e-81
Query Start/End: Original strand, 765 - 1012
Target Start/End: Complemental strand, 46611388 - 46611135
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||    
T  46611388 aatacctcaaattcgtccttgaattttgaaaaatttgtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttataaaatgtcaatc 46611289  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagc-aggacc- 961  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||| |||||| ||||||     
T  46611288 aaatcagtccctccgttaagttggcctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccatgcaagcaaggacca 46611189  T
Q  962 aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||||| |||||||||| ||||||| || ||| |||||||| ||||||||||||    
T  46611188 aactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaa 46611135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 765 - 1012
Target Start/End: Complemental strand, 44795975 - 44795722
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    |||||||||||||||||||||||||||||||||||||  |||| ||| |||||||||||||||| |||||||||||||  ||||||||||||| |||| |    
T  44795975 aatacctcaaattcgtccttgaattttgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccatgaatttacaaaatatcaaac 44795876  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg--acc 961  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||   |     
T  44795875 aaatcagtccctccgttaagttggtctgttaatggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtaagatgccacgcaagcagggatca 44795776  T
Q  962 aactga-tgatttacac-aaatttccaatgaccaaattgatg-atttacacaaa 1012  Q
    |||||| |||||||||| |||||||||| ||||||||||||| |||||||||||    
T  44795775 aactgattgatttacacaaaatttccaaggaccaaattgatgaatttacacaaa 44795722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 150; E-Value: 1e-78
Query Start/End: Original strand, 765 - 1001
Target Start/End: Original strand, 35903829 - 35904070
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||| ||||||||||||||||||||| | ||||| | |||||||||||||| ||| |||||||||||||| ||||||||||||||||||||    
T  35903829 aatacctcaaatttgtccttgaattttgaaaaatcagccaatttcatccctgaattttgcaaaatatcaaattagtccctgaatttacaaaatgtcaatc 35903928  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-ggacc- 961  Q
    |||| ||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||     
T  35903929 aaattagtccctccattaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacatcagatgccacgcaagcagggacca 35904028  T
Q  962 aactga-tgatttacac-aaatttccaatgaccaaattgatg 1001  Q
    |||||| |||||||||| |||||||||| |||||||||||||    
T  35904029 aactgattgatttacacaaaatttccaaggaccaaattgatg 35904070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 149; E-Value: 4e-78
Query Start/End: Original strand, 766 - 1012
Target Start/End: Complemental strand, 2661992 - 2661740
Alignment:
Q  766 atacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatca 865  Q
    |||||||||||||||||||||||||||||||||||  ||||| ||||| |||||||||||||| |||||||||||||  |||||||||||||||||||||    
T  2661992 atacctcaaattcgtccttgaattttgaaaaatcgaccaatttcgtccgtgaattttgcgaaatatcaaattagtccatgaatttacaaaatgtcaatca 2661893  T
Q  866 aatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-ggacc-a 962  Q
    ||||||||||||| |||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||||| ||||||| ||||| |    
T  2661892 aatcagtccctccattaagttggtctgttaacagaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcatatgccatgcaagcagggaccaa 2661793  T
Q  963 actga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    ||| | |||||||||| |||||||||| |||||||||||| ||||||||||||    
T  2661792 actaattgatttacacaaaatttccaaggaccaaattgatggatttacacaaa 2661740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 145; E-Value: 9e-76
Query Start/End: Original strand, 758 - 1012
Target Start/End: Original strand, 46609146 - 46609406
Alignment:
Q  758 attgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaat 857  Q
    |||||| |||| ||||||||||| |||||||||||||||||||| ||||| ||||||||||||||| |||| |||||||||||||| |||||||||||||    
T  46609146 attgactaatatctcaaattcgttcttgaattttgaaaaatcggccaatttcgtccctgaattttgtgaaatatcaaattagtccctgaatttacaaaat 46609245  T
Q  858 gtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca 956  Q
    ||||||||||||||||||| |||||||||||| |||||| ||||||||| ||| ||||||| ||||||||||||||||||||||||||| ||||||||||    
T  46609246 gtcaatcaaatcagtccctacgttaagttggtttgttaatggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgtcacgcaagca 46609345  T
Q  957 -ggacc-aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
     ||||| |||||| |||||||||| ||||||| || ||| |||||||| ||||||||||||    
T  46609346 gggaccaaactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaa 46609406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 765 - 1012
Target Start/End: Original strand, 28626415 - 28626668
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||| | ||||||||||||||||||||||||||||| |||||||||||| | ||||| |||||| ||||||| ||||||||||||||||||||    
T  28626415 aatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtcaatc 28626514  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-ggacc- 961  Q
    |||| |||||||||||||| |||||||||||||||||||||| ||| ||||||| |||||||||||| ||||||||||||||||||||||||| |||||     
T  28626515 aaattagtccctccgttaaattggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcgtaccacgtcagatgccacgcaagcagggacca 28626614  T
Q  962 aactgat-gatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    || |||| ||||||||| ||||||| || ||| |||||||| ||||||||||||    
T  28626615 aattgatggatttacacaaaatttcgaaggactaaattgatggatttacacaaa 28626668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 135; E-Value: 9e-70
Query Start/End: Original strand, 765 - 938
Target Start/End: Original strand, 38191899 - 38192073
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    |||||||||||||||||||| ||||||||||||| || ||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  38191899 aatacctcaaattcgtccttaaattttgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatc 38191998  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacg 938  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||    
T  38191999 aaatcagtccctccgttaagttggtctgttaacggaggtgacatgtcacgttaacctctgacaaagcttaccacg 38192073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 127; E-Value: 5e-65
Query Start/End: Original strand, 765 - 958
Target Start/End: Complemental strand, 2379068 - 2378874
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||| | | | |||||||  ||||||||||||||||||||    
T  2379068 aatacctcaaattcgtccttgaattttaaaaaatcggtcaatttcgtccctgaattttgcaaaatagctatttagtccttgaatttacaaaatgtcaatc 2378969  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaac-tctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||| |||||| ||| ||| |||||||||||||||||| ||||||||||||    
T  2378968 aaatcagtccctccgttaagttggtttgttaacggaggtgacgtgtaatgttaacatcttacatagcttaccacgtcagatgtcacgcaagcagg 2378874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 756 - 958
Target Start/End: Complemental strand, 611316 - 611113
Alignment:
Q  756 ttattgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaa 855  Q
    |||| ||| ||||||||||||||||||||||||||| ||||||| | ||| | |||||||||||||| ||||| | | | |||| ||| |||||||||||    
T  611316 ttatagactaatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccctgaatttttcgaaatagctatttagcccctgaatttacaaa 611217  T
Q  856 atgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaag 954  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||| | ||||||||| ||||||||||||||    
T  611216 atgtcaatcaaattagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgttagatgccacgcaag 611117  T
Q  955 cagg 958  Q
    ||||    
T  611116 cagg 611113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 115; E-Value: 7e-58
Query Start/End: Original strand, 765 - 958
Target Start/End: Original strand, 23291574 - 23291767
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||| ||||||||||||||||||| ||||||||| ||| | |||||||||||||||||||| ||| | |||||| | ||||||||||||||||||||    
T  23291574 aataccttaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaatttacaaaatgtcaatc 23291673  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    |||||||||||||||||||||| ||||||| || |||||||| ||||||||||| |||| |||| ||||||||||||||||| ||||||||||||    
T  23291674 aaatcagtccctccgttaagttagtctgtt-acagaggtgacgtgtaacgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcagg 23291767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 115; E-Value: 7e-58
Query Start/End: Original strand, 760 - 957
Target Start/End: Original strand, 30598336 - 30598534
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgt 859  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||| |  ||||||||||||||||||| | | | || ||||  |||||||||||||||    
T  30598336 tgactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaatttgtccctgaattttgcgaaatagctattttgtccttgaatttacaaaatgt 30598435  T
Q  860 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgtt-aactctgacaaagcttaccacgtcagatgccacgcaagcag 957  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||| |||||| |||| |||| ||||||||||| ||||||||||||    
T  30598436 caatcaaattagtccctccgttaagttggtatgttaacggaggtgacgtgtaacgttaaactcttacaaggcttgccacgtcagataccacgcaagcag 30598534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 771 - 958
Target Start/End: Complemental strand, 17517052 - 17516864
Alignment:
Q  771 tcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatcaaatca 870  Q
    ||||||||||||||||||||| ||||||||||||| | ||| | |||||||||||||| |   | || ||||  ||||||||||||||||||||||||||    
T  17517052 tcaaattcgtccttgaattttcaaaaatcggtcaaattcgttcatgaattttgcgaaatagttattttgtccttgaatttacaaaatgtcaatcaaatca 17516953  T
Q  871 gtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||| |||| |||| ||||||||||||||||||||||||||||||    
T  17516952 gtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacctcttacaaggcttaccacgtcagatgccacgcaagcagg 17516864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 765 - 958
Target Start/End: Complemental strand, 54412632 - 54412438
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    |||| ||||||||||||| |||||||| |||||| |||||| | ||||| |||||||||||| | ||| | ||||| || ||||||||||||||||||||    
T  54412632 aatatctcaaattcgtccgtgaattttaaaaaattggtcaaattcgtccttgaattttgcgagatatctatttagttcctgaatttacaaaatgtcaatc 54412533  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    |||||||||||||| |||||||||| |||||||||||||||| ||||||||||| || | |||| ||||||||||||||||||||||||||||||    
T  54412532 aaatcagtccctccattaagttggtgtgttaacggaggtgacgtgtaacgttaaccttttacaatgcttaccacgtcagatgccacgcaagcagg 54412438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 765 - 958
Target Start/End: Complemental strand, 42282558 - 42282364
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||| ||||||| ||||| | |||  ||||||||||||||| ||| | |||||||  |||||||||||||||  ||     
T  42282558 aatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtttctgaattttgcgaaatatctatttagtccttgaatttacaaaatgttcatt 42282459  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    ||||||||||||||||||||||||| ||||||| |||||||| |||| |||||| |||| |||| | ||||||||||||||||||||||||||||    
T  42282458 aaatcagtccctccgttaagttggtatgttaaccgaggtgacatgtaccgttaacctcttacaaggtttaccacgtcagatgccacgcaagcagg 42282364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 100; E-Value: 7e-49
Query Start/End: Original strand, 760 - 958
Target Start/End: Original strand, 44267980 - 44268179
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgt 859  Q
    |||| ||||||||||||||||||||||||||| ||||||||| ||| | | || ||||||||||||||| | | | || ||||  ||||||| |||||||    
T  44267980 tgactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcatctctgaattttgcgaaatagctattttgtccttgaatttataaaatgt 44268079  T
Q  860 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||  |||| | |||||||||||| ||||||| |||||||    
T  44268080 caatcaaatcagtccctccgttaagttggtatgttaacggaggtgacgtgtaacgttaacctcctacaaggtttaccacgtcagttgccacgtaagcagg 44268179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 767 - 957
Target Start/End: Complemental strand, 46114189 - 46113997
Alignment:
Q  767 tacctcaaattcgtccttgaattttgaaaaa-tcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatca 865  Q
    |||||||||||  |||||||||||| ||||| |||| ||| |  |||| |||||||||||||| ||| | ||||||   |||||||||||||||||||||    
T  46114189 tacctcaaatttatccttgaattttaaaaaaatcggccaaatttgtccttgaattttgcgaaatatctatttagtcattgaatttacaaaatgtcaatca 46114090  T
Q  866 aatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcag 957  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||| |||| | |||||| ||||||||||||||||||||    
T  46114089 aatcagtcactccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccatgtcagatgccacgcaagcag 46113997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 765 - 958
Target Start/End: Complemental strand, 21350690 - 21350496
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    |||||||||||||| ||| ||| ||||  |||||||| ||| | |||  ||||||||||||||| | | | || ||||  ||||||||||||||||||||    
T  21350690 aatacctcaaattcatccgtgatttttttaaaatcggccaaattcgttactgaattttgcgaaatagctattttgtccttgaatttacaaaatgtcaatc 21350591  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    ||||||||||||||||||||||||| |||||||||||||| | ||||||||||| |||| |||| ||||||||||||||||| ||||||||||||    
T  21350590 aaatcagtccctccgttaagttggtatgttaacggaggtgtcgtgtaacgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcagg 21350496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 765 - 958
Target Start/End: Complemental strand, 51686479 - 51686285
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    |||||||||||||||||||| |||||| ||||||| | ||| | ||||||| |||||||||||| ||  | |||||||  |||||||||||||||  |||    
T  51686479 aatacctcaaattcgtccttaaattttcaaaaatcagccaaattcgtccctaaattttgcgaaatatttatttagtcctcgaatttacaaaatgttcatc 51686380  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    ||||||||||||| || |||||||| |||||||| ||||||| |||| |||||| |||| |||||||||||||||||||||| ||||||||||||    
T  51686379 aaatcagtccctctgtcaagttggtatgttaacgaaggtgacgtgtaccgttaacctcttacaaagcttaccacgtcagatgtcacgcaagcagg 51686285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 765 - 956
Target Start/End: Original strand, 48829360 - 48829552
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||| |||| || | ||| |   | |||||||||||||||| ||| | |||||||  | |||||||||||||| |||    
T  48829360 aatacctcaaattcgtccttgaattttcaaaattcagccaaatttattcctgaattttgcgaaatatctatttagtcctcggatttacaaaatgtccatc 48829459  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca 956  Q
    ||||||||||||| |||||||||||||||||||||||||||  ||||  ||||| |||| |||| ||||||||||||||| | ||||||||||    
T  48829460 aaatcagtccctcggttaagttggtctgttaacggaggtgaagtgtactgttaacctcttacaaggcttaccacgtcagaggtcacgcaagca 48829552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 759 - 954
Target Start/End: Original strand, 27897149 - 27897344
Alignment:
Q  759 ttgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatg 858  Q
    ||||| |||||||||||||| | ||| |||||| |||||| | |||| | ||||| |||||||||| ||  | | | |||||| | |||||||||||||     
T  27897149 ttgactaatacctcaaattctttcttaaattttaaaaaatggatcaaattcgtccatgaattttgc-aattagctatttagtctctgaatttacaaaata 27897247  T
Q  859 tcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaag 954  Q
    |||||||||| ||||| |||||||||||||| |||||||||||||||| ||||||||||| |||| |||  ||||||||||||||||| ||||||||    
T  27897248 tcaatcaaattagtccatccgttaagttggtttgttaacggaggtgacgtgtaacgttaacctcttacatggcttaccacgtcagatgtcacgcaag 27897344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 811 - 958
Target Start/End: Complemental strand, 43767086 - 43766938
Alignment:
Q  811 tccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgt 910  Q
    |||||||||||||| ||| | | | || ||||  ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||  |||    
T  43767086 tccctgaattttgcaaaatagctattttgtccttgaatttacaaaatgtcaatcaaatcagtcactccgttacgttggtctgttaacggaggtgatgtgt 43766987  T
Q  911 aacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    |||||||| |||| | || ||||||||||||| ||| ||||||||||||    
T  43766986 aacgttaacctcttataaggcttaccacgtcaaatgtcacgcaagcagg 43766938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 767 - 842
Target Start/End: Original strand, 2660218 - 2660293
Alignment:
Q  767 tacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcc 842  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||| |||||||||||||    
T  2660218 tacctcaaattcgtccttgaattttgaaaaatcgaccaatttcgtccctgaattttgcgaaatatcaaattagtcc 2660293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 759 - 850
Target Start/End: Original strand, 54898435 - 54898526
Alignment:
Q  759 ttgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||| ||| | |||||||| ||||||    
T  54898435 ttgactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 54898526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 760 - 850
Target Start/End: Original strand, 44794207 - 44794296
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    |||| |||||||||||||||||||||||||||||||| |||| ||||| | |||||||||||||||||| |||||||||||||| ||||||    
T  44794207 tgactaatacctcaaattcgtccttgaattttgaaaa-tcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattt 44794296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 765 - 850
Target Start/End: Original strand, 41977754 - 41977839
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    ||||||||||||||||||||||||||| ||||||||| ||| | ||||||||||||| |||||| |||||||||||||| ||||||    
T  41977754 aatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaatttggcgaaatatcaaattagtccctgaattt 41977839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 765 - 880
Target Start/End: Complemental strand, 3152358 - 3152243
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    |||||||||||||  ||||| |||||||||||||||| ||||| | |||||||||||||||||| |||||||||||||| ||||||   | | ||| |||    
T  3152358 aatacctcaaatttatccttaaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatc 3152259  T
Q  865 aaatcagtccctccgt 880  Q
    ||||| ||||||||||    
T  3152258 aaatccgtccctccgt 3152243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 765 - 850
Target Start/End: Complemental strand, 2226292 - 2226207
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    ||||||||||||||||||||||||||| ||||||||| ||| | |||||||||||||||||||| ||| | |||||||| ||||||    
T  2226292 aatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 2226207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 765 - 850
Target Start/End: Complemental strand, 53190899 - 53190814
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    ||||||||||||||||||||||||||| ||||||||| ||| | |||||||||||||||||||| ||| | |||||||| ||||||    
T  53190899 aatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 53190814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 760 - 850
Target Start/End: Complemental strand, 27899226 - 27899136
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    |||| ||||||||||||||||||||||||||| ||||||||| ||| | ||||| |||||||||||||| ||| | |||||||| ||||||    
T  27899226 tgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattt 27899136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 760 - 850
Target Start/End: Original strand, 21348722 - 21348812
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    |||| ||||||||||||| ||||||||||||| ||||||||| ||| | ||||| |||||||||||||| ||| | |||||||| ||||||    
T  21348722 tgactaatacctcaaatttgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattt 21348812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 305 - 382
Target Start/End: Complemental strand, 36309154 - 36309079
Alignment:
Q  305 ttcgtcgatgccattatctcaaattgagtgaaagtttgaagaaaaggtgcatttatatcagatcaatgttttgcaact 382  Q
    |||||||||| ||||||||  ||||||||||||||||||||||||||||||||   |||||||||||| |||||||||    
T  36309154 ttcgtcgatgacattatcttgaattgagtgaaagtttgaagaaaaggtgcatt--gatcagatcaatgatttgcaact 36309079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 774 - 850
Target Start/End: Complemental strand, 35905843 - 35905767
Alignment:
Q  774 aattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    ||||| |||||||||||| ||||||||||||| | |||||||||||||||||||| ||| | |||||||| ||||||    
T  35905843 aattcatccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 35905767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 765 - 828
Target Start/End: Original strand, 43765141 - 43765204
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaa 828  Q
    ||||||||||||||||||||||||||| ||||||||||||| | ||| || |||||||||||||    
T  43765141 aatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgttccggaattttgcgaaa 43765204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 765 - 822
Target Start/End: Complemental strand, 7884984 - 7884927
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaatttt 822  Q
    ||||||||||||||||||||||||||| ||||||||| ||| | ||||||||||||||    
T  7884984 aatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaatttt 7884927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 765 - 850
Target Start/End: Complemental strand, 30600058 - 30599973
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    |||||||||||||||||||| |||||| | ||||||| ||| |  ||||||||||||||||||| ||| | |||||||| ||||||    
T  30600058 aatacctcaaattcgtccttaaatttttacaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattt 30599973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 802 - 880
Target Start/End: Complemental strand, 19987697 - 19987619
Alignment:
Q  802 tcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatcaaatcagtccctccgt 880  Q
    |||||| |||||||||||||||||||| ||||||||||||||  |||||   | | ||| |||||||||||||||||||    
T  19987697 tcaatttcgtccctgaattttgcgaaatatcaaattagtccctaaattttacacacgtccatcaaatcagtccctccgt 19987619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 847 - 905
Target Start/End: Complemental strand, 24846548 - 24846491
Alignment:
Q  847 atttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtga 905  Q
    |||| |||||||||||| ||||||||||||||||||||||||  |||||||||||||||    
T  24846548 attttcaaaatgtcaattaaatcagtccctccgttaagttgg-atgttaacggaggtga 24846491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 765 - 850
Target Start/End: Original strand, 17515314 - 17515399
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    |||||||||||||| |||||||||||| |||||| || ||| | | || ||||||||||||||| ||| | |||||||| ||||||    
T  17515314 aatacctcaaattcttccttgaatttttaaaaattggccaaattcatcgctgaattttgcgaaatatctatttagtccctgaattt 17515399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 759 - 842
Target Start/End: Original strand, 51684608 - 51684691
Alignment:
Q  759 ttgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcc 842  Q
    ||||| |||| |||||||||||||||||||||| ||||||| | ||| | | |||||||||||||| ||| ||| | |||||||    
T  51684608 ttgactaatatctcaaattcgtccttgaattttcaaaaatcagccaaattcatccctgaattttgcaaaatatctatttagtcc 51684691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 765 - 842
Target Start/End: Original strand, 46112491 - 46112568
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcc 842  Q
    ||||||||||||||||||||||||||| ||||||||| ||| | |||   |||||||||| ||| ||| | |||||||    
T  46112491 aatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgttattgaattttgcaaaatatctatttagtcc 46112568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 278
Target Start/End: Complemental strand, 36325774 - 36325710
Alignment:
Q  214 atggcgtttgttatcgctgaaatgatgtctggtctgtgccatcttgatatcaatggatacaagct 278  Q
    ||||| |||||||| ||||||| |||| ||||||| |||||||||||||| || ||| |||||||    
T  36325774 atggcttttgttattgctgaaacgatgcctggtctatgccatcttgatatgaaaggacacaagct 36325710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 765 - 880
Target Start/End: Complemental strand, 23293310 - 23293195
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||| || ||||||||| |||||||| | ||| | || || |||||||||||||| ||| | |||||||  ||||||   ||| ||| |||    
T  23293310 aatacctcaaatttgttcttgaatttcgaaaaatcagccaaattcgcccttgaattttgcgaaatatctatttagtccatgaattttacaaacgtccatc 23293211  T
Q  865 aaatcagtccctccgt 880  Q
    |||  |||||||||||    
T  23293210 aaaatagtccctccgt 23293195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 771 - 850
Target Start/End: Original strand, 23774162 - 23774241
Alignment:
Q  771 tcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    ||||||||||||||||||||| |  | |||| ||| | ||||||| |||| ||||||| ||||| |||||||| ||||||    
T  23774162 tcaaattcgtccttgaattttcacgagtcggccaaattcgtccctcaattatgcgaaatatcaatttagtccctgaattt 23774241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 765 - 831
Target Start/End: Original strand, 2377033 - 2377099
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaat 831  Q
    ||||||||||||||||  ||||||||| |||||| |  ||| | |||||||||||||||| ||||||    
T  2377033 aatacctcaaattcgtttttgaattttcaaaaattgaccaaattcgtccctgaattttgcaaaaaat 2377099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 765 - 850
Target Start/End: Original strand, 42279511 - 42279596
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatc-ggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    ||||||||||||||||| ||||||||| ||||||| | |||||| |||| | ||||||||| ||| ||| | |||||||| ||||||    
T  42279511 aatacctcaaattcgtcattgaattttcaaaaatcagctcaatt-cgtctcagaattttgcaaaatatctatttagtccctgaattt 42279596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 759 - 800
Target Start/End: Original strand, 600723 - 600764
Alignment:
Q  759 ttgaccaatacctcaaattcgtccttgaattttgaaaaatcg 800  Q
    ||||| |||||||||||||| |||||||||||| ||||||||    
T  600723 ttgactaatacctcaaattcatccttgaattttaaaaaatcg 600764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 170; Significance: 1e-90; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 170; E-Value: 1e-90
Query Start/End: Original strand, 765 - 1012
Target Start/End: Complemental strand, 27692922 - 27692669
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||| |||||||||||||| |||||||||||||||||||     
T  27692922 aatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaattagtccctgaatttacaaaatgtcaatt 27692823  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-ggacc- 961  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||     
T  27692822 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtaagatgccacgcaagcagggacca 27692723  T
Q  962 aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||||| |||||||||| |||||||||| |||||||||||| ||||||||||||    
T  27692722 aactgattgatttacacaaaatttccaaggaccaaattgatggatttacacaaa 27692669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 167; E-Value: 7e-89
Query Start/End: Original strand, 760 - 1001
Target Start/End: Complemental strand, 38548921 - 38548675
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgt 859  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||| |||| ||||||||||||| |    
T  38548921 tgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaatttacaaaattt 38548822  T
Q  860 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-g 957  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |    
T  38548821 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagg 38548722  T
Q  958 gacc-aactga-tgatttacac-aaatttccaatgaccaaattgatg 1001  Q
    |||| |||||| |||||||||| |||||| ||| |||||||||||||    
T  38548721 gaccaaactgattgatttacacaaaattttcaaggaccaaattgatg 38548675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 163; E-Value: 2e-86
Query Start/End: Original strand, 765 - 1001
Target Start/End: Original strand, 8608241 - 8608483
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaa-ttttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaat 863  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||| ||||||| |||||||||||    
T  8608241 aataccttaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaaattttgcgaaatatcaaattagtccctgaatttataaaatgtcaat 8608340  T
Q  864 caaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-ggacc 961  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||    
T  8608341 caaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgcaacgcaagcagggacc 8608440  T
Q  962 -aactga-tgatttacac-aaatttccaatgaccaaattgatg 1001  Q
     |||||| |||||||||| |||||||||| |||||||||||||    
T  8608441 aaactgattgatttacacaaaatttccaaggaccaaattgatg 8608483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 163; E-Value: 2e-86
Query Start/End: Original strand, 760 - 1012
Target Start/End: Original strand, 29237150 - 29237408
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgt 859  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||| |||||||||||||||    
T  29237150 tgactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgt 29237249  T
Q  860 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagc-ag 957  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||| ||    
T  29237250 caatcaaattagtccctccattaagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcaag 29237349  T
Q  958 gacc-aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||| |||||| |||||||||| ||||||| || ||| |||||||| ||||||||||||    
T  29237350 gaccaaactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaa 29237408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 160; E-Value: 1e-84
Query Start/End: Original strand, 759 - 1001
Target Start/End: Original strand, 13106802 - 13107049
Alignment:
Q  759 ttgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatg 858  Q
    ||||| ||||||| ||||||||||||||||||||||||||||| ||||| | |||||||||||||||||| |||||||||||||| ||||||| |||||     
T  13106802 ttgactaataccttaaattcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaatttataaaatt 13106901  T
Q  859 tcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca- 956  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||     
T  13106902 tcaatcaaattagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcag 13107001  T
Q  957 ggacc-aactga-tgatttacac-aaatttccaatgaccaaattgatg 1001  Q
    ||||| |||||| |||||||||| |||||||||| |||||||||||||    
T  13107002 ggaccaaactgattgatttacacaaaatttccaaggaccaaattgatg 13107049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 159; E-Value: 4e-84
Query Start/End: Original strand, 756 - 1001
Target Start/End: Complemental strand, 13284089 - 13283839
Alignment:
Q  756 ttattgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaa 855  Q
    |||||||  |||||| |||||||||||||||||||||||||||||| |||||  ||||||||||||||||||| |||||||||||||  |||||||||||    
T  13284089 ttattgattaataccacaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccatgaatttacaaa 13283990  T
Q  856 atgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaag 954  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||| ||||||||    
T  13283989 atgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttatcacgtcagatgtcacgcaag 13283890  T
Q  955 ca-ggacc-aactga-tgatttacac-aaatttccaatgaccaaattgatg 1001  Q
    || ||||| |||||| |||||||||| |||||||||| |||||||||||||    
T  13283889 cagggaccaaactgattgatttacacaaaatttccaaggaccaaattgatg 13283839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 159; E-Value: 4e-84
Query Start/End: Original strand, 760 - 1012
Target Start/End: Original strand, 33761068 - 33761326
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgt 859  Q
    |||| ||||||||||||||||| ||||||||||||||||| | ||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  33761068 tgactaatacctcaaattcgtctttgaattttgaaaaatcagccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgt 33761167  T
Q  860 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-g 957  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||| | |    
T  33761168 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgttacgttaacctctgacaaagcttaccacgtcagatgccacgcaagtagg 33761267  T
Q  958 gacc-aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||| |||||| |||||||||| ||||||| || ||| |||||||| ||||||||||||    
T  33761268 gaccaaactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaa 33761326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 158; E-Value: 2e-83
Query Start/End: Original strand, 765 - 1001
Target Start/End: Original strand, 33707210 - 33707451
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||| ||||||| ||||||||||||    
T  33707210 aatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttataaaatgtcaatc 33707309  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-ggacc- 961  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| || ||||||| |||||     
T  33707310 aaatcagtcactccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgtcaagcaagcagggacca 33707409  T
Q  962 aactga-tgatttacac-aaatttccaatgaccaaattgatg 1001  Q
    |||||| |||||||||| |||||| ||| |||||||||||||    
T  33707410 aactgattgatttacacaaaattttcaaggaccaaattgatg 33707451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 154; E-Value: 4e-81
Query Start/End: Original strand, 757 - 1012
Target Start/End: Original strand, 35509210 - 35509471
Alignment:
Q  757 tattgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaa 856  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||    
T  35509210 tattgactaatacctcaaattagtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaa 35509309  T
Q  857 tgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagc 955  Q
    |||||||||||||||||| ||||||||||||  ||||||||| ||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  35509310 tgtcaatcaaatcagtccatccgttaagttgacctgttaacgaaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagc 35509409  T
Q  956 a-ggacc-aactga-tgatttac-acaaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    | ||||| |||||| |||||||| | ||||||| || ||| |||||||| ||||||||||||    
T  35509410 agggaccaaactgattgatttacaaaaaatttcgaaggacgaaattgatggatttacacaaa 35509471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 154; E-Value: 4e-81
Query Start/End: Original strand, 765 - 1012
Target Start/End: Complemental strand, 35510904 - 35510651
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||| |||||||||||||| ||||||||||||||||||||    
T  35510904 aatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccttgaattttgtgaaatatcaaattagtccctgaatttacaaaatgtcaatc 35510805  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-ggacc- 961  Q
    |||||||||||||||||||||||||||||||||||||||||| | | ||||||| ||||||||||||||| ||||||||||| |||||||||| |||||     
T  35510804 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtatcacgttaacctctgacaaagcttaacacgtcagatgtcacgcaagcagggacca 35510705  T
Q  962 aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||||| |||||||||| ||||||| || ||| |||||||| ||||||||||||    
T  35510704 aactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaa 35510651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 150; E-Value: 1e-78
Query Start/End: Original strand, 765 - 1012
Target Start/End: Complemental strand, 29239272 - 29239019
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||| ||||| |||||||||||||| ||||||||||||| ||||||    
T  29239272 aatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaatttacaaaatatcaatc 29239173  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-ggacc- 961  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||| |||||||||| |||||     
T  29239172 aaattagtccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgtcacgcaagcagggacca 29239073  T
Q  962 aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||||| |||||||||| ||||||| || ||| |||||||| ||||||||||||    
T  29239072 aactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaa 29239019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 765 - 1012
Target Start/End: Complemental strand, 601789 - 601536
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||    
T  601789 aatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatc 601690  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-ggacc- 961  Q
    |||| ||||||||||||||||||||||||||||||||||||| | | ||||||| ||||||||||||||||||||||| || ||||||||||| |||||     
T  601689 aaattagtccctccgttaagttggtctgttaacggaggtgacgtttcacgttaacctctgacaaagcttaccacgtcaaataccacgcaagcagggacca 601590  T
Q  962 aactga-tgatttaca-caaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||||| |||||||||  ||||||| || ||| |||||||| ||||||||||||    
T  601589 aactgattgatttacagaaaatttcgaaggacgaaattgatggatttacacaaa 601536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 760 - 1012
Target Start/End: Complemental strand, 33762803 - 33762549
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgt 859  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||| |||||||||||||| |||||||||||||||    
T  33762803 tgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttacaaaatgt 33762704  T
Q  860 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaactctgacaaagcttaccacgtcagatgccacgcaagca-gg 958  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||| ||  ||||||||||||||||||||| |||||||||| ||    
T  33762703 caatcaaatcaatccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaac-ct--caaagcttaccacgtcagatgtcacgcaagcaggg 33762607  T
Q  959 acc-aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    ||| |||||| ||||| |||| ||||||| || ||| |||||||| ||||||||||||    
T  33762606 accaaactgattgattcacacaaaatttcgaaggacgaaattgatggatttacacaaa 33762549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 140; E-Value: 9e-73
Query Start/End: Original strand, 760 - 958
Target Start/End: Complemental strand, 15308351 - 15308152
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgt 859  Q
    |||| ||||||||||| | ||||||||||||||||||||||| ||||| |||||||||||| | ||||| |||||||||||||| |||||||||||||||    
T  15308351 tgactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaatttacaaaatgt 15308252  T
Q  860 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    ||||||||| || |||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15308251 caatcaaattagcccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagg 15308152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 140; E-Value: 9e-73
Query Start/End: Original strand, 760 - 958
Target Start/End: Complemental strand, 15488720 - 15488521
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgt 859  Q
    |||| ||||||||||| | ||||||||||||||||||||||| ||||| |||||||||||| | ||||| |||||||||||||| |||||||||||||||    
T  15488720 tgactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaatttacaaaatgt 15488621  T
Q  860 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    ||||||||| || |||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15488620 caatcaaattagcccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagg 15488521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 765 - 958
Target Start/End: Complemental strand, 42943511 - 42943317
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||| ||||||||| ||| | |||||||||||||||||||| ||| | |||||||| ||||||||||||||||||||    
T  42943511 aatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtcaatc 42943412  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||| ||||||||||||||||| ||||||||||||    
T  42943411 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcagg 42943317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 130; E-Value: 8e-67
Query Start/End: Original strand, 765 - 1012
Target Start/End: Original strand, 27404214 - 27404467
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||| | ||||||||||||||||||||||| ||||| |||||||||||| | ||||| |||||| |||||||  |||||| ||||||||||||    
T  27404214 aatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctaaatttataaaatgtcaatc 27404313  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-ggacc- 961  Q
    |||| ||||||| ||||||||||||||||||||||||||||| ||| ||||||| |||||||||||| |||||||||||||| |||||||||| |||||     
T  27404314 aaattagtcccttcgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcgtaccacgtcagatgtcacgcaagcagggacca 27404413  T
Q  962 aactga-tgatttacac-aaatttccaatgaccaaattgatg-atttacacaaa 1012  Q
    |||||| |||||||||| ||||||| |||||| ||||||||| |||||||||||    
T  27404414 aactgattgatttacacaaaatttcgaatgactaaattgatgaatttacacaaa 27404467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 754 - 953
Target Start/End: Complemental strand, 5038157 - 5037958
Alignment:
Q  754 tattattgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttaca 853  Q
    |||| ||||| ||||||||||||||||| ||||||||| ||||||||||||| | ||| | |||||||||||||| | | | |||||||| |||||||||    
T  5038157 tatttttgactaatacctcaaattcgtc-ttgaattttaaaaaatcggtcaaattcgttcttgaattttgcgaaatagctatttagtccctgaatttaca 5038059  T
Q  854 aaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgca 952  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||| |||| ||||||||||||||||||||||||    
T  5038058 aaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaatgttaacctcttacaaggcttaccacgtcagatgccacgca 5037959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 755 - 958
Target Start/End: Complemental strand, 22273986 - 22273782
Alignment:
Q  755 attattgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaa 854  Q
    ||||| ||| ||||||||||||| ||||||||||||| ||||||||| ||| |  ||| ||||||||||| ||| ||| | |||||||| ||||||||||    
T  22273986 attatagactaatacctcaaatttgtccttgaattttaaaaaatcggccaaatttgtctctgaattttgcaaaatatctatttagtccctgaatttacaa 22273887  T
Q  855 aatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaa 953  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||| ||||||||||||||||| ||| |||    
T  22273886 aatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggcttaccacgtcagatgtcacacaa 22273787  T
Q  954 gcagg 958  Q
    |||||    
T  22273786 gcagg 22273782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 765 - 956
Target Start/End: Original strand, 26238730 - 26238922
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||| ||||||| | ||| | |||||||||||||||||||| ||| | |||||||  |||||||||||||||| |||    
T  26238730 aatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagtcctcgaatttacaaaatgtccatc 26238829  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca 956  Q
    |||||||||||||||||||||| ||||||||||||||||||  ||||  ||||| |||| |||| ||||||||||||||||| ||||||||||    
T  26238830 aaatcagtccctccgttaagttagtctgttaacggaggtgatgtgtactgttaacctcttacaaggcttaccacgtcagatgtcacgcaagca 26238922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 765 - 958
Target Start/End: Original strand, 41823894 - 41824088
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||| ||||||||||||||||||| ||||||| |  |||| ||||| |||||||||||||| ||| | |||||||  |||||||||||||||  |||    
T  41823894 aataccttaaattcgtccttgaattttcaaaaatcagctaatttcgtccttgaattttgcgaaatatctatttagtcctcgaatttacaaaatgttcatc 41823993  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||  ||||| |||| |||  ||||||||||||||| ||||||||| ||||    
T  41823994 aaatcagtccctccgttaagttggtctattaacggaggtgacttgtacagttaacctcttacatggcttaccacgtcagaagccacgcaaacagg 41824088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 759 - 958
Target Start/End: Complemental strand, 43262228 - 43262030
Alignment:
Q  759 ttgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatg 858  Q
    ||||| |||||||||||||||||||| |||||| ||||||| |  || | || |||| |||||||||||| ||| | |||||||  ||||||||||||||    
T  43262228 ttgactaatacctcaaattcgtccttaaattttcaaaaatcagctaaattcgaccctaaattttgcgaaatatctatttagtcctcgaatttacaaaatg 43262129  T
Q  859 tcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcag 957  Q
    ||||||||||||||| ||||||||||||||||||||||||  |||||| | || |||||| |||| ||||||||||||||||| |||| |||||||||||    
T  43262128 tcaatcaaatcagtctctccgttaagttggtctgttaacg--ggtgacatctaccgttaacctcttacaaagcttaccacgtctgatgtcacgcaagcag 43262031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 769 - 958
Target Start/End: Original strand, 13484553 - 13484742
Alignment:
Q  769 cctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatcaaat 868  Q
    ||||||||||||| ||||||||| ||||||||| ||| | ||||||||||||||||||||     | || ||||  ||||||||||||||||||||||||    
T  13484553 cctcaaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaattgttattttgtccttgaatttacaaaatgtcaatcaaat 13484652  T
Q  869 cagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    |||||||||| |||||||||||| |||||| ||||||| || |||||||| || | |||| ||||||||||||||||||||| ||||||||    
T  13484653 cagtccctccattaagttggtctattaacgaaggtgacgtg-aacgttaaccttttacaaggcttaccacgtcagatgccacacaagcagg 13484742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 760 - 958
Target Start/End: Original strand, 41040719 - 41040918
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgt 859  Q
    |||| ||||||||||||| ||| ||||||||| |||||||||  || | |||  ||||||||| | ||| | | | || ||||  |||||||||||||||    
T  41040719 tgactaatacctcaaatttgtctttgaatttttaaaaatcggctaaattcgtttctgaattttccaaaatagctattttgtccttgaatttacaaaatgt 41040818  T
Q  860 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgtt-aactctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||| | |||| ||||  |||||||||||||||| ||||||||||||    
T  41040819 caatcaaatcggtccctccgttaagttggtctgttaacagaggtgacgtgtaacgttgacctcttacaagacttaccacgtcagatgtcacgcaagcagg 41040918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 776 - 911
Target Start/End: Original strand, 15562439 - 15562573
Alignment:
Q  776 ttcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatcaaatcagtccc 875  Q
    |||||| ||||||||| ||||||| ||||| | ||||| | |||||||  ||| ||||| ||||| || ||||||| |||||||||||||||||||||||    
T  15562439 ttcgtctttgaatttttaaaaatcagtcaaattcgtccttaaattttgtaaaatatcaatttagttcc-gaatttataaaatgtcaatcaaatcagtccc 15562537  T
Q  876 tccgttaagttggtctgttaacggaggtgacttgta 911  Q
    ||||||||||||||||||||||||||||||| ||||    
T  15562538 tccgttaagttggtctgttaacggaggtgacatgta 15562573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 765 - 880
Target Start/End: Original strand, 27691158 - 27691273
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||| ||||||   | | ||| |||    
T  27691158 aatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatc 27691257  T
Q  865 aaatcagtccctccgt 880  Q
    ||||| ||||||||||    
T  27691258 aaatccgtccctccgt 27691273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 773 - 958
Target Start/End: Original strand, 3151969 - 3152155
Alignment:
Q  773 aaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatcaaatcagt 872  Q
    ||||| ||||||||||||  |||||| || ||| |  |||||||| |||| | ||| | | | ||||||||  ||||||||||||||||||||||| |||    
T  3151969 aaatttgtccttgaatttaaaaaaattggccaaatttgtccctgagtttttcaaaatagctatttagtcccttaatttacaaaatgtcaatcaaattagt 3152068  T
Q  873 ccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    ||||| ||||||||||| ||||||  || ||||| ||||| ||||| |||| |||| | ||||||||||||||| ||||||||||||    
T  3152069 ccctctgttaagttggtatgttaatagatgtgacatgtaatgttaacctcttacaaggtttaccacgtcagatgtcacgcaagcagg 3152155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 765 - 880
Target Start/End: Complemental strand, 33708943 - 33708829
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    |||||||||||||| |||||||||||| ||||| ||||||||| |||||||||||||||||||| || ||||||||||| ||||||   ||| ||| |||    
T  33708943 aatacctcaaattcatccttgaattttaaaaaa-cggtcaatttcgtccctgaattttgcgaaatattaaattagtccctgaattttacaaacgtccatc 33708845  T
Q  865 aaatcagtccctccgt 880  Q
    ||||| ||||||||||    
T  33708844 aaatctgtccctccgt 33708829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 760 - 850
Target Start/End: Original strand, 38547227 - 38547317
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    |||| |||||||||| |||||||||||||||| ||||||||| ||| | ||||| |||||||||||||| |||||||||||||| ||||||    
T  38547227 tgactaatacctcaagttcgtccttgaattttaaaaaatcggccaaatacgtccatgaattttgcgaaatatcaaattagtccctgaattt 38547317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 765 - 850
Target Start/End: Complemental strand, 13108476 - 13108391
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    |||| |||||||||||||||||||||| |||||||||  || | |||||||||||||||||||| |||||||||||||| ||||||    
T  13108476 aataactcaaattcgtccttgaattttaaaaaatcggctaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattt 13108391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 765 - 850
Target Start/End: Original strand, 13282482 - 13282567
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    ||||||||||||||||||||||||||| ||||||||| ||| | |||||||||||||||||||| ||| | |||||||| ||||||    
T  13282482 aatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 13282567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 836 - 956
Target Start/End: Original strand, 17807094 - 17807215
Alignment:
Q  836 ttagtcccagaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttac 934  Q
    |||||||| |||||||||||| |||||||||| ||| |||||| ||||||||| ||||||||||||||||| ||||  ||||| |||| |||| ||||||    
T  17807094 ttagtccccgaatttacaaaacgtcaatcaaaccagaccctccattaagttggcctgttaacggaggtgacatgtactgttaacctcttacaaggcttac 17807193  T
Q  935 cacgtcagatgccacgcaagca 956  Q
     | |||||||| |||| |||||    
T  17807194 gatgtcagatgtcacgtaagca 17807215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 759 - 850
Target Start/End: Complemental strand, 8609933 - 8609842
Alignment:
Q  759 ttgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    ||||| |||||||||||||||| |||||||||| ||||||||| ||| | |||||||||||||||||||| ||| | |||||||| ||||||    
T  8609933 ttgactaatacctcaaattcgttcttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 8609842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 765 - 880
Target Start/End: Original strand, 9671981 - 9672096
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||| ||||||||||||||||||| |  ||||  |||| | ||||| |||||||||||||| ||| | |||||||| ||||||||||||| ||||||    
T  9671981 aataccttaaattcgtccttgaattttcaccaatcaatcaaattcgtccatgaattttgcgaaatatctatttagtccccgaatttacaaaatttcaatc 9672080  T
Q  865 aaatcagtccctccgt 880  Q
    ||||| || |||||||    
T  9672081 aaatcggttcctccgt 9672096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 765 - 842
Target Start/End: Complemental strand, 34681151 - 34681074
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcc 842  Q
    ||||||||||||||||||||||||||| ||||||||| ||| | |||||||||||||||||||| ||| | |||||||    
T  34681151 aatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtcc 34681074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 779 - 880
Target Start/End: Original strand, 15305815 - 15305916
Alignment:
Q  779 gtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatcaaatcagtccctcc 878  Q
    |||||||||||||||||||| ||||||||  ||||||||||| |  |||| |||||||||||||| ||||||   | | ||| |||||||||||||||||    
T  15305815 gtccttgaattttgaaaaattggtcaattttgtccctgaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctcc 15305914  T
Q  879 gt 880  Q
    ||    
T  15305915 gt 15305916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 779 - 880
Target Start/End: Original strand, 15486184 - 15486285
Alignment:
Q  779 gtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatcaaatcagtccctcc 878  Q
    |||||||||||||||||||| ||||||||  ||||||||||| |  |||| |||||||||||||| ||||||   | | ||| |||||||||||||||||    
T  15486184 gtccttgaattttgaaaaattggtcaattttgtccctgaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctcc 15486283  T
Q  879 gt 880  Q
    ||    
T  15486284 gt 15486285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 765 - 880
Target Start/End: Original strand, 42941778 - 42941893
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||| ||||||| | ||| | ||||||||||||||| |||| ||  | |||||||| ||||||   | ||||| |||    
T  42941778 aatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccctgaattttgagaaatatttatttagtccctgaattttacagatgtccatc 42941877  T
Q  865 aaatcagtccctccgt 880  Q
    |||  |||||||||||    
T  42941878 aaaatagtccctccgt 42941893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 765 - 842
Target Start/End: Original strand, 5036449 - 5036526
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcc 842  Q
    |||||||||||||||||||| |||||| ||||||| ||||| | ||||||||||||||| |||| ||| | |||||||    
T  5036449 aatacctcaaattcgtccttaaattttaaaaaatccgtcaaattcgtccctgaattttgtgaaatatctatttagtcc 5036526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 757 - 850
Target Start/End: Complemental strand, 13486247 - 13486154
Alignment:
Q  757 tattgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    ||||||| ||||||||||||| || |||||||||| ||||||||||||  | |||| ||| ||||||||||| ||| | |||||||| ||||||    
T  13486247 tattgactaatacctcaaatttgtgcttgaatttttaaaaatcggtcagattcgtctctggattttgcgaaatatctatttagtccctgaattt 13486154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 765 - 820
Target Start/End: Original strand, 600764 - 600819
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaatt 820  Q
    ||||||||||||||||||||||||||||||||||| | ||||| ||||| ||||||    
T  600764 aatacctcaaattcgtccttgaattttgaaaaatcagccaatttcgtccttgaatt 600819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 765 - 880
Target Start/End: Complemental strand, 27407037 - 27406922
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||| | |||||||||||||||||||| || ||||| ||||| |||||| | ||||| || ||| ||||||| ||||||   | | ||| |||    
T  27407037 aatacctcaaaatagtccttgaattttgaaaaattggccaatttcgtccatgaattattcgaaatattaaaatagtccctgaattttacagacgtccatc 27406938  T
Q  865 aaatcagtccctccgt 880  Q
    ||||||||| ||||||    
T  27406937 aaatcagtctctccgt 27406922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 853 - 959
Target Start/End: Complemental strand, 29694314 - 29694207
Alignment:
Q  853 aaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgc 951  Q
    ||||| |||||||||||||| |||| |||||||| | ||||||||||||||||  ||||   |||| | || |||| | ||||||||||| |||||||||    
T  29694314 aaaatatcaatcaaatcagttcctctgttaagttagcctgttaacggaggtgatgtgtactattaaccgcttacaaggtttaccacgtcatatgccacgc 29694215  T
Q  952 aagcagga 959  Q
    ||||||||    
T  29694214 aagcagga 29694207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 765 - 850
Target Start/End: Complemental strand, 41825784 - 41825699
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    ||||||||||||||||||||||||||| |||||||    || | ||||| |||||||||||||| ||| | |||||||| ||||||    
T  41825784 aatacctcaaattcgtccttgaattttcaaaaatcaaataaattcgtccttgaattttgcgaaatatctatttagtccctgaattt 41825699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 765 - 850
Target Start/End: Original strand, 22272338 - 22272425
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaa--tcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    ||||||||||||||||| ||||||||| |||||  || ||||| | ||||||||||||||||| || ||| | |||||||| ||||||    
T  22272338 aatacctcaaattcgtctttgaattttaaaaaaaatcagtcaaattcgtccctgaattttgcgtaatatctatttagtccctgaattt 22272425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 771 - 851
Target Start/End: Original strand, 31821428 - 31821508
Alignment:
Q  771 tcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattta 851  Q
    |||||||||||| |||||||| | |  |||||||| | ||||||| |||| ||||||| ||||| ||||||||||||||||    
T  31821428 tcaaattcgtccctgaattttcacacgtcggtcaacttcgtccctcaattatgcgaaatatcaacttagtcccagaattta 31821508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 765 - 850
Target Start/End: Complemental strand, 26242454 - 26242369
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    |||||||||| ||||| |||||||||| ||||||| | ||| | ||||||| |||||||||||| ||| | |||||| | ||||||    
T  26242454 aatacctcaatttcgttcttgaattttcaaaaatcagccaaattcgtccctaaattttgcgaaatatctatttagtctctgaattt 26242369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 765 - 850
Target Start/End: Complemental strand, 41042724 - 41042639
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    ||||||| |||| |||||||||||||| |||||| || ||| |  |||||||||||||| |||| ||| | |||||||| ||||||    
T  41042724 aataccttaaatccgtccttgaattttaaaaaattggccaaatttgtccctgaattttgtgaaatatctatttagtccctgaattt 41042639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 765 - 828
Target Start/End: Complemental strand, 7745252 - 7745189
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaa 828  Q
    |||| |||||||||||| ||||||||| ||||||| | ||| | |||| |||||||||||||||    
T  7745252 aatatctcaaattcgtctttgaattttcaaaaatcagccaaattcgtctctgaattttgcgaaa 7745189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 161; Significance: 3e-85; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 161; E-Value: 3e-85
Query Start/End: Original strand, 758 - 1012
Target Start/End: Complemental strand, 16764703 - 16764444
Alignment:
Q  758 attgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaat 857  Q
    |||||| ||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||| |||||||||||||| |||||||||||||    
T  16764703 attgactaatacctcaaattcgtccttgaattttgagaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaat 16764604  T
Q  858 gtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca 956  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||| ||||||||||    
T  16764603 gtcaatcaaaccagtccctccgttaagtt-gtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccatgtcagatgtcacgcaagca 16764505  T
Q  957 g-gacc-aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    | |||| |||||| |||||||||| |||||||||| |||||||||||| ||||||||||||    
T  16764504 gagaccaaactgattgatttacacaaaatttccaaggaccaaattgatggatttacacaaa 16764444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 150; E-Value: 1e-78
Query Start/End: Original strand, 765 - 1001
Target Start/End: Original strand, 14387353 - 14387594
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||    
T  14387353 aatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttacaaaatgtcaatc 14387452  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-ggacc- 961  Q
    |||| |||||||||||||| || | ||||||| | ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||     
T  14387453 aaataagtccctccgttaaattagactgttaaagaaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggacca 14387552  T
Q  962 aactga-tgatttacac-aaatttccaatgaccaaattgatg 1001  Q
    |||||| |||||||||| |||||||||| |||||||||||||    
T  14387553 aactgattgatttacacaaaatttccaaggaccaaattgatg 14387594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 150; E-Value: 1e-78
Query Start/End: Original strand, 765 - 1001
Target Start/End: Complemental strand, 40561963 - 40561722
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||| ||||||||||||||||||| ||||| |||| |||||||||| |||| | |||||||||||| ||||||||||||||||||||    
T  40561963 aatacctcaaattcgtctttgaattttgaaaaatcggccaatttcgtctctgaattttgtgaaatagcaaattagtccctgaatttacaaaatgtcaatc 40561864  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-ggacc- 961  Q
    ||||| ||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||     
T  40561863 aaatcggtccctccgttaagttggtttgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggacca 40561764  T
Q  962 aactga-tgatttacacaa-atttccaatgaccaaattgatg 1001  Q
    || ||| |||||||||||| |||||||| |||||||||||||    
T  40561763 aattgattgatttacacaacatttccaaggaccaaattgatg 40561722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 765 - 1012
Target Start/End: Original strand, 24205602 - 24205855
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||| | ||||||||||||||||||||||| ||||| |||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||    
T  24205602 aatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatc 24205701  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-ggacc- 961  Q
    |||| |||||||||||| |||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||| ||||||| |||||     
T  24205702 aaattagtccctccgttcagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccatgcaagcagggacca 24205801  T
Q  962 aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||||| |||||||||| ||||||| || ||| |||||||| ||||||||||||    
T  24205802 aactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaa 24205855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 760 - 958
Target Start/End: Original strand, 6783363 - 6783562
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgt 859  Q
    |||| ||||||||||| | ||||||||||||| ||||||||||||||| |||||||||||| | | ||| |||||||||||||| |||||||||||||||    
T  6783363 tgactaatacctcaaaatagtccttgaattttaaaaaatcggtcaatttcgtccctgaattattcaaaatatcaaattagtccctgaatttacaaaatgt 6783462  T
Q  860 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  6783463 caatcaaattattccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgtcacgcaagcagg 6783562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 755 - 1012
Target Start/End: Complemental strand, 37022280 - 37022017
Alignment:
Q  755 attattgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaa 854  Q
    |||| |||| ||||||||||| | ||||||||||||||||||||||  ||||| |||||||||||||| ||||| |||||||||||||| ||||||||||    
T  37022280 attaatgactaatacctcaaaatagtccttgaattttgaaaaatcgaccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaa 37022181  T
Q  855 aatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaa 953  Q
    |||||||||||||| |||||||||||||| |||||| ||||||||| ||||| ||| ||||||| ||||||||||||||||||||||||||| |||||||    
T  37022180 aatgtcaatcaaattagtccctccgttaatttggtccgttaacggaagtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgacacgcaa 37022081  T
Q  954 gca-ggacc-aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    ||| ||||| |||||| |||||||||| ||||||  || ||| |||||||| ||||||||||||    
T  37022080 gcagggaccaaactgattgatttacacaaaattttgaaggacgaaattgatggatttacacaaa 37022017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 760 - 1012
Target Start/End: Complemental strand, 2577570 - 2577312
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgt 859  Q
    |||| ||||||||||| | ||||||||||||||||||||||  ||||| ||||||||||||||  |||| |||||||||||||| |||||||||||||||    
T  2577570 tgactaatacctcaaaatagtccttgaattttgaaaaatcgtccaatttcgtccctgaattttttgaaatatcaaattagtccctgaatttacaaaatgt 2577471  T
Q  860 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-g 957  Q
    ||||||||| |||||||||||||| ||||||||||||| |||||||| ||| ||||||| ||||||||||||||||||||||||||| |||||||||| |    
T  2577470 caatcaaattagtccctccgttaatttggtctgttaacagaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgtcacgcaagcagg 2577371  T
Q  958 gacc-aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||| |||| | |||||||||| ||||||| || ||| |||||||| ||||||||||||    
T  2577370 gaccaaactaattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaa 2577312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 765 - 958
Target Start/End: Original strand, 19906686 - 19906880
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||| ||||||||||||||||||| ||||||||||||| | |||||||||||||||||||| ||| | ||||||||| |||||||||||||||||||    
T  19906686 aataccttaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtcccataatttacaaaatgtcaatc 19906785  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||| |||  ||||||||||||||||||||||||| ||||    
T  19906786 aaatcagtccctccgttaagttggtctgttaaccgaggtgacgtgtaacgttaacctcttacatggcttaccacgtcagatgccacgcaaacagg 19906880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 127; E-Value: 5e-65
Query Start/End: Original strand, 765 - 958
Target Start/End: Original strand, 39663158 - 39663352
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||| ||||||||||||||||||| ||||||||||||| | |||||||||||||||| ||| | | | |||||||| ||||||||||||||||||||    
T  39663158 aatacctaaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaatttacaaaatgtcaatc 39663257  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||  ||||||||||||||||| ||||||||||||    
T  39663258 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacatggcttaccacgtcagatgtcacgcaagcagg 39663352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 759 - 958
Target Start/End: Original strand, 16376734 - 16376934
Alignment:
Q  759 ttgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatg 858  Q
    ||||| ||||||||||||||||| ||||||||| ||||||||||||| | |||||||||||||| ||||| | | | |||||||| |||||||||||||     
T  16376734 ttgactaatacctcaaattcgtctttgaattttaaaaaatcggtcaaattcgtccctgaattttacgaaatagctatttagtccctgaatttacaaaata 16376833  T
Q  859 tcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcag 957  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||| || | ||||||||| |||| |||| ||||||||||||| ||| |||||||||||    
T  16376834 tcaatcaaatcagtccctccgttaagttggtctattaacagaggtaacatttaacgttaacctcttacaaggcttaccacgtcatatgtcacgcaagcag 16376933  T
Q  958 g 958  Q
    |    
T  16376934 g 16376934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 765 - 958
Target Start/End: Complemental strand, 39456865 - 39456671
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||| |||||||| |||||||||||| |||||| ||| || | ||||| |||||||||| ||| | | | |||||||| ||||||| ||||||||||||    
T  39456865 aatacttcaaattcatccttgaattttaaaaaattggttaaattcgtccatgaattttgcaaaatagctatttagtccctgaatttataaaatgtcaatc 39456766  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||| |||| |||| |||| ||||||||||||| ||| ||||||||||||    
T  39456765 aaatcagtccatccgttaagttggtctgttaacggaggtgacgtgtaacattaacctcttacaaggcttaccacgtcatatgtcacgcaagcagg 39456671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 765 - 954
Target Start/End: Complemental strand, 6799493 - 6799302
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgt-caat 863  Q
    |||| |||||||||||||||||||||| ||||||||| ||| | ||||| |||||||||| ||| | | | || ||||  ||||||| ||||| | ||||    
T  6799493 aatatctcaaattcgtccttgaatttttaaaaatcggacaaattcgtccatgaattttgccaaatagctattttgtccttgaatttataaaattttcaat 6799394  T
Q  864 caaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaag 954  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||| |||| |||||||||| |||||||||||||||    
T  6799393 caaatcagtccctccgttaagttggtctgttaacggtggtgacgtgtaacgttaacctcttacaaggcttaccacgccagatgccacgcaag 6799302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 759 - 958
Target Start/End: Original strand, 42517556 - 42517755
Alignment:
Q  759 ttgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtcc-ctgaattttgcgaaaaatcaaattagtcccagaatttacaaaat 857  Q
    ||||| ||||||||||||||||||||||||||| ||||||||| ||||    ||  ||  ||||| ||||| | | | || ||||  |||||||||||||    
T  42517556 ttgactaatacctcaaattcgtccttgaatttttaaaaatcggccaatcaaatcggct--attttacgaaatagctattttgtccttgaatttacaaaat 42517653  T
Q  858 gtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca 956  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||  |||| ||||||||||||||||||||||||||||    
T  42517654 gtcaatcaaatcagtcccttcgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcatacaaggcttaccacgtcagatgccacgcaagca 42517753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 765 - 951
Target Start/End: Original strand, 34400318 - 34400505
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    |||||||||||||| |||||||||||| ||||||||| ||| | | |||||||||||||||||| | | | || ||||  ||||||||||||| ||||||    
T  34400318 aatacctcaaattcatccttgaattttcaaaaatcggccaaattcatccctgaattttgcgaaatagctattttgtccttgaatttacaaaatatcaatc 34400417  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgtt-aactctgacaaagcttaccacgtcagatgccacgc 951  Q
    ||||| |||||||||||||||||||||||||||||||||||  ||||| ||| | |||| ||||  |||||||||||||||| |||||    
T  34400418 aaatcggtccctccgttaagttggtctgttaacggaggtgatatgtaatgttgacctcttacaagacttaccacgtcagatgtcacgc 34400505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 765 - 958
Target Start/End: Original strand, 19581418 - 19581612
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    |||||||||||||||||||| |||||| ||||||| | ||| |  ||||||||||||||||||| ||| | |||||||  |||||||| ||||||| |||    
T  19581418 aatacctcaaattcgtccttaaatttttaaaaatcagccaaatttgtccctgaattttgcgaaatatctatttagtcctcgaatttaccaaatgtccatc 19581517  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaac-tctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    |||||||||  ||||||||||| || |||||||||||||||| ||||   ||||| ||| |||| ||||||||||||| ||| ||||||||||||    
T  19581518 aaatcagtctttccgttaagtttgtatgttaacggaggtgacatgtactattaacttcttacaaggcttaccacgtcaaatgtcacgcaagcagg 19581612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 765 - 958
Target Start/End: Complemental strand, 37646563 - 37646369
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    |||||| ||| ||||| |||||| ||| ||||||| ||||| | |||||   |||| ||||||| ||| | |||||||| |||||| ||||||| |||||    
T  37646563 aataccccaacttcgttcttgaactttcaaaaatcagtcaaattcgtcctcaaattctgcgaaatatctatttagtccctgaattttcaaaatgccaatc 37646464  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    ||||||||||||| |||||||||| ||||||||||| ||||| ||||  ||||| | || |||| ||||||||||||||||| ||||||||||||    
T  37646463 aaatcagtccctctgttaagttggcctgttaacggacgtgacatgtactgttaaccgcttacaaggcttaccacgtcagatgtcacgcaagcagg 37646369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 845 - 958
Target Start/End: Complemental strand, 17698114 - 17698000
Alignment:
Q  845 gaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcaga 943  Q
    ||||||||||||||||||||||||||||| ||||||||||||| | | |||||||||||||| ||||||||||| |||| | ||  |||||||||| |||    
T  17698114 gaatttacaaaatgtcaatcaaatcagtctctccgttaagttgatatattaacggaggtgacgtgtaacgttaatctcttaaaagacttaccacgttaga 17698015  T
Q  944 tgccacgcaagcagg 958  Q
    || ||||||||||||    
T  17698014 tgtcacgcaagcagg 17698000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 765 - 956
Target Start/End: Complemental strand, 31475165 - 31474972
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaa-tgtcaat 863  Q
    |||||||||| ||||| ||| |||||| ||||||| ||||| | |||| |  ||||||| |||| ||| | ||| |||| |||||| ||||| |||||||    
T  31475165 aatacctcaacttcgttctttaattttcaaaaatcagtcaaattcgtcaccaaattttgagaaatatctatttaatccctgaattttcaaaaatgtcaat 31475066  T
Q  864 caaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca 956  Q
    |||||| ||||||| |||||||||   |||||||||||||||| ||||  ||||| | || |||| ||||||||||||||||| ||||||||||    
T  31475065 caaatcggtccctctgttaagttgacatgttaacggaggtgacgtgtactgttaaccgcttacaatgcttaccacgtcagatgtcacgcaagca 31474972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 756 - 957
Target Start/End: Complemental strand, 162168 - 161967
Alignment:
Q  756 ttattgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaa 855  Q
    |||||||  ||||| |||| |||||| ||||||||| ||||||| ||||| | || |||  |||||| | ||| ||| | ||||| |  |||||| ||||    
T  162168 ttattgagtaatacttcaatttcgtc-ttgaattttcaaaaatcagtcaaattcgaccccaaattttacaaaatatctatttagttcttgaattttcaaa 162070  T
Q  856 atgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaag 954  Q
    | ||||||||||||  ||| |||||||||||||||| |||||||||||||| |||| |||||| | || ||||  |||||||||||||||| ||||||||    
T  162069 acgtcaatcaaatcgatccatccgttaagttggtctattaacggaggtgacatgtaccgttaaccgcttacaagacttaccacgtcagatgtcacgcaag 161970  T
Q  955 cag 957  Q
    |||    
T  161969 cag 161967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 760 - 850
Target Start/End: Original strand, 16763075 - 16763165
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||| ||| | |||||||| ||||||    
T  16763075 tgactaatacctcaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 16763165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 755 - 880
Target Start/End: Original strand, 37020502 - 37020627
Alignment:
Q  755 attattgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaa 854  Q
    |||| |||| ||||||||||| | |||||||||||||||||||||||||||||  |||| ||||||||  |||| |||||||||||||| ||||||   |    
T  37020502 attaatgactaatacctcaaaatagtccttgaattttgaaaaatcggtcaattttgtccttgaattttttgaaatatcaaattagtccctgaattttgca 37020601  T
Q  855 aatgtcaatcaaatcagtccctccgt 880  Q
     | ||| |||||||||||||||||||    
T  37020602 gacgtccatcaaatcagtccctccgt 37020627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 760 - 880
Target Start/End: Complemental strand, 14389229 - 14389109
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgt 859  Q
    |||| ||||||||||||||||| ||||||||| ||||||||| ||| | |||||||||||||||||||| ||| | |||||||| |||||| | ||||||    
T  14389229 tgactaatacctcaaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttccaaatgt 14389130  T
Q  860 caatcaaatcagtccctccgt 880  Q
    | ||||||   ||||||||||    
T  14389129 ccatcaaaatggtccctccgt 14389109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 765 - 880
Target Start/End: Complemental strand, 24208182 - 24208067
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||| |  |||||||||||||||||||||| ||||| |||||||||||| | ||||| |||||||||||||| ||||||   | | ||| |||    
T  24208182 aatacctcaaaatactccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattttacagacgtccatc 24208083  T
Q  865 aaatcagtccctccgt 880  Q
    ||||||||||||||||    
T  24208082 aaatcagtccctccgt 24208067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 760 - 880
Target Start/End: Complemental strand, 6786126 - 6786006
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgt 859  Q
    |||| ||||||||||| | ||||||||||||||||||||||| ||||| ||||||| |||| |  |||| |||||||||||||| ||||||   | | ||    
T  6786126 tgactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtcccttaattatttgaaatatcaaattagtccctgaattttacagacgt 6786027  T
Q  860 caatcaaatcagtccctccgt 880  Q
    | |||||||||||||||||||    
T  6786026 ccatcaaatcagtccctccgt 6786006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 760 - 850
Target Start/End: Original strand, 2766933 - 2767023
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    |||| |||| |||||||||||||||||||||| |||||||||||||   ||||| |||||||||||||| ||| | |||||||| ||||||    
T  2766933 tgactaatagctcaaattcgtccttgaatttttaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattt 2767023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 760 - 850
Target Start/End: Complemental strand, 39664893 - 39664803
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    |||| ||||||||||||||||||||||||||| ||||||||| ||| | |||||| ||||||| ||||| ||| | |||||||| ||||||    
T  39664893 tgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccccgaattttacgaaatatctatttagtccctgaattt 39664803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 758 - 850
Target Start/End: Original strand, 40560220 - 40560312
Alignment:
Q  758 attgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    |||||| ||||| ||||||||||| ||||||||| ||||||| | ||| | |||||||||||||||||||| ||| | |||||||| ||||||    
T  40560220 attgactaatacttcaaattcgtctttgaattttaaaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 40560312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 758 - 850
Target Start/End: Complemental strand, 44709892 - 44709800
Alignment:
Q  758 attgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    |||||| ||||||||||||||||||||||||||| ||||| ||| ||| | || ||||||||||||||||| | | | |||||||| ||||||    
T  44709892 attgactaatacctcaaattcgtccttgaattttaaaaaaccggccaaattcggccctgaattttgcgaaataactatttagtccctgaattt 44709800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 765 - 867
Target Start/End: Original strand, 17696210 - 17696312
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||| ||||||||| ||| | | |||||||||||||  ||| ||| | |||||||| ||||||   ||| |||||||    
T  17696210 aatacctcaaattcgtccttgaattttcaaaaatcggccaaattcatccctgaattttggaaaatatctatttagtccctgaattttacaaacgtcaatc 17696309  T
Q  865 aaa 867  Q
    |||    
T  17696310 aaa 17696312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 765 - 842
Target Start/End: Complemental strand, 19908387 - 19908309
Alignment:
Q  765 aatacctcaaattcgtccttgaatttt-gaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcc 842  Q
    |||||||||||||||||||||||||||  ||||||||| ||| |  ||||||||||||||||||| ||| | |||||||    
T  19908387 aatacctcaaattcgtccttgaattttaaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtcc 19908309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 765 - 850
Target Start/End: Complemental strand, 42519346 - 42519260
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaa-ttttgcgaaaaatcaaattagtcccagaattt 850  Q
    ||||||||||||||||||||||||||| |||||| | |||| |  |||| |||| |||||| ||| ||| | |||||||| ||||||    
T  42519346 aatacctcaaattcgtccttgaattttaaaaaattgatcaaattagtccttgaatttttgcaaaatatctatttagtccctgaattt 42519260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 156; Significance: 3e-82; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 156; E-Value: 3e-82
Query Start/End: Original strand, 759 - 1012
Target Start/End: Complemental strand, 35403710 - 35403451
Alignment:
Q  759 ttgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatg 858  Q
    ||||| ||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  35403710 ttgactaatacctcaaattcgtccttgaattttaaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatg 35403611  T
Q  859 tcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca- 956  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||     
T  35403610 tcaatcaaatcagtccctccgttaaattggtatgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcag 35403511  T
Q  957 ggacc-aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    ||||| |||||| || ||||||| ||||||| || ||| |||||||| ||||||||||||    
T  35403510 ggaccaaactgattggtttacacaaaatttcgaaggacgaaattgatggatttacacaaa 35403451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 765 - 958
Target Start/End: Original strand, 27664434 - 27664628
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||| ||||||||||||||||||||||| |||||  ||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||    
T  27664434 aatacctcaaattagtccttgaattttgaaaaatcggccaattttgtccctgaattttgcaaaatatcaaattagtccctgaatttacaaaatgtcaatc 27664533  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  27664534 aaatcagtccctccgttaagttggtatgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagg 27664628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 142; E-Value: 6e-74
Query Start/End: Original strand, 765 - 1012
Target Start/End: Original strand, 35401973 - 35402226
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    |||| ||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  35401973 aatatctcaaattcgtccttgaattttgaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatc 35402072  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-ggacc- 961  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||| ||||||| ||||||||||||||| |||||||||||||| | ||||| |||||     
T  35402073 aaatcagtccctccgttaaattggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttatcacgtcagatgccatgtaagcagggacca 35402172  T
Q  962 aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||||| | |||||||| ||||||| || ||| |||||||| ||||||||||||    
T  35402173 aactgattaatttacacaaaatttcgaaggacgaaattgatggatttacacaaa 35402226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 760 - 1012
Target Start/End: Complemental strand, 20479809 - 20479551
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgt 859  Q
    |||| ||||||||||| | ||||||||||||||||||||||| ||||| |||||||||||||| ||||| |||||||||||||| |||||||||||||||    
T  20479809 tgactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgt 20479710  T
Q  860 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-g 957  Q
    ||||||||| |||||||||||||| |||||| ||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||| |||||||||| |    
T  20479709 caatcaaattagtccctccgttaatttggtccgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgacacgcaagcagg 20479610  T
Q  958 gacc-aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||| |||||| |||||||||| ||||||  || ||| |||||||| ||||||||||||    
T  20479609 gaccaaactgattgatttacacaaaattttgaaggacgaaattgatggatttacacaaa 20479551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 135; E-Value: 9e-70
Query Start/End: Original strand, 765 - 958
Target Start/End: Original strand, 39857649 - 39857843
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  39857649 aatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtcccagaatttacaaaatgtcaatc 39857748  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||| |||  ||||||||||||||||| ||||||| ||||    
T  39857749 aaatcagtccctccgttaagttggtctgttaaccgaggtgacgtgtaacgttaacctcttacatggcttaccacgtcagatgtcacgcaaacagg 39857843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 765 - 958
Target Start/End: Original strand, 37113945 - 37114139
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||| |||||| |||||| | | |||||||||||||||||| ||| | ||||||||  |||||||||||||||||||    
T  37113945 aatacctcaaattcgtccttgaattttaaaaaattggtcaaattcatccctgaattttgcgaaatatctatttagtccctaaatttacaaaatgtcaatc 37114044  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||| |||| ||||||||||||||||||||||||||||||    
T  37114045 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacattaacctcttacaaggcttaccacgtcagatgccacgcaagcagg 37114139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 130; E-Value: 8e-67
Query Start/End: Original strand, 765 - 1001
Target Start/End: Complemental strand, 78099 - 77858
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||| ||| |||||||| ||||| |||||||||||||| |||||    
T  78099 aatacctcaaattcgtctttgaattttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaatttgtccctgaatttacaaaatgccaatc 78000  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-ggacc- 961  Q
    ||||||||||||||||||||||||||||||||| ||||| || ||||||||||| ||  |||||||||||||| |||||||  || ||||||| |||||     
T  77999 aaatcagtccctccgttaagttggtctgttaacagaggttacatgtaacgttaaccttcgacaaagcttaccatgtcagatttcatgcaagcagggacca 77900  T
Q  962 aactga-tgatttacac-aaatttccaatgaccaaattgatg 1001  Q
    |||||| |||||||||| |||||||||| |||||||||||||    
T  77899 aactgattgatttacacaaaatttccaaggaccaaattgatg 77858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 130; E-Value: 8e-67
Query Start/End: Original strand, 765 - 957
Target Start/End: Original strand, 47384298 - 47384491
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||||||||||  | ||| | ||||| |||||||||||||| ||| |||||||||| ||||||||||||||||||||    
T  47384298 aatacctcaaattcgtccttgaattttgaaaaatgagccaaattcgtccttgaattttgcgaaatatctaattagtccccgaatttacaaaatgtcaatc 47384397  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcag 957  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||| |||| ||||||||||||||||| |||||||||||    
T  47384398 aaatcagtccctccgttaagttggtatgttaacggaggtgacatgtaacgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcag 47384491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 760 - 958
Target Start/End: Complemental strand, 13169773 - 13169574
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgt 859  Q
    |||| ||||||||||||||||||||||||||| ||||||||| ||| |  ||||||||||||||||||| ||| | |||||||| |||||||||||||||    
T  13169773 tgactaatacctcaaattcgtccttgaattttcaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaatttacaaaatgt 13169674  T
Q  860 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||  ||||||||||| ||||| ||||||||||||    
T  13169673 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacatggcttaccacgttagatgtcacgcaagcagg 13169574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 765 - 958
Target Start/End: Complemental strand, 48228026 - 48227832
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||| ||||||||| ||||||||||||| | ||||  |||||||||||||| ||| | || ||||| ||||||||||||||||||||    
T  48228026 aatacctcaaattcgtctttgaattttaaaaaatcggtcaaattcgtctttgaattttgcgaaatatctattttgtccctgaatttacaaaatgtcaatc 48227927  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    |||||||||||||| |||||||||| |||||||||||||||| ||||||||||| |||| |||| ||||||||||||||||||||||||||||||    
T  48227926 aaatcagtccctccattaagttggtgtgttaacggaggtgacgtgtaacgttaacctcttacaatgcttaccacgtcagatgccacgcaagcagg 48227832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 756 - 958
Target Start/End: Complemental strand, 6605491 - 6605288
Alignment:
Q  756 ttattgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaa 855  Q
    |||||||  ||||||||||||| ||||||||||||| ||||||||||||| |  || |||||||||||||||| | | | |||||||| |||||||||||    
T  6605491 ttattgattaatacctcaaatttgtccttgaattttaaaaaatcggtcaaatttgttcctgaattttgcgaaatagctatttagtccctgaatttacaaa 6605392  T
Q  856 atgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaag 954  Q
    ||| ||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||| |||| |||| ||||||||||||||||||||| ||||    
T  6605391 atgccaatcaaatcagtccctccattaagttggtctgttaacggatgtgacgtgtaacgttaacctcttacaaggcttaccacgtcagatgccacacaag 6605292  T
Q  955 cagg 958  Q
    ||||    
T  6605291 cagg 6605288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 115; E-Value: 7e-58
Query Start/End: Original strand, 765 - 958
Target Start/End: Original strand, 46437111 - 46437305
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||| ||||||| | ||| | ||||  |||||||||||||| | | | || ||||  |||||||||||||||||| |    
T  46437111 aatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtcgttgaattttgcgaaatagctattttgtccttgaatttacaaaatgtcaacc 46437210  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||| |||||    
T  46437211 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaagcttaccacgtcagatgccacgcaggcagg 46437305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 765 - 958
Target Start/End: Original strand, 24226585 - 24226779
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||| ||||||||| ||| | ||||| |||||||||||||| | | | || ||||  ||||||||||||||||||||    
T  24226585 aatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccttgaattttgcgaaatagctattttgtccttgaatttacaaaatgtcaatc 24226684  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgtt-aactctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||| |||| ||||||||||||||||  ||| ||||||||    
T  24226685 aaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttgacctcttacaaggcttaccacgtcagatatcacacaagcagg 24226779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 759 - 958
Target Start/End: Complemental strand, 45361367 - 45361167
Alignment:
Q  759 ttgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatg 858  Q
    ||||| |||||||||||||| |||||||||||| |||||| ||||||||  || |||||||||||| ||| |   | |||||||  ||| ||||||||||    
T  45361367 ttgactaatacctcaaattcttccttgaattttaaaaaatgggtcaattttgttcctgaattttgcaaaatagttatttagtccttgaacttacaaaatg 45361268  T
Q  859 tcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcag 957  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||  ||||||||||||||||| |||||||||||    
T  45361267 tcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacatggcttaccacgtcagatgtcacgcaagcag 45361168  T
Q  958 g 958  Q
    |    
T  45361167 g 45361167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 839 - 1012
Target Start/End: Original strand, 29994955 - 29995134
Alignment:
Q  839 gtcccagaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccac 937  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||| ||||    
T  29994955 gtccctgaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacattaacctctgacaaagctttccac 29995054  T
Q  938 gtcagatgccacgcaagca-ggacc-aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||| |||||||||||||| ||||| |||||| |||||||||| |||||||||| |||||||||||| ||||||||||||    
T  29995055 gtcatatgccacgcaagcagggaccaaactgattgatttacacaaaatttccaaggaccaaattgatggatttacacaaa 29995134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 765 - 958
Target Start/End: Original strand, 34775002 - 34775196
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    |||| |||||||||||| ||||||||| ||||||||||||| | | | | |||||||||| ||| | | | |||||||| ||||||||||||| ||||||    
T  34775002 aatatctcaaattcgtctttgaattttaaaaaatcggtcaaattcattcatgaattttgcaaaatagctatttagtccctgaatttacaaaatatcaatc 34775101  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||| |||   |||||||||||||||||||||||||||||    
T  34775102 aaatcagtccctccgttaagttggtatgttaacggaggtgacgtgtaacgttaacctcttacatgacttaccacgtcagatgccacgcaagcagg 34775196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 765 - 958
Target Start/End: Original strand, 35691431 - 35691625
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||| ||||||||||||| | |||| || |||||||||||| | | | || ||||  ||||||||||||||||||||    
T  35691431 aatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtctctaaattttgcgaaatagctattttgtccttgaatttacaaaatgtcaatc 35691530  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    |||||||||||| |  ||| |||||||||||||||||||| | ||||||||||| |||| |||| ||||||||||||||||| ||||||||||||    
T  35691531 aaatcagtcccttcactaaattggtctgttaacggaggtggcgtgtaacgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcagg 35691625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 756 - 919
Target Start/End: Complemental strand, 22155941 - 22155777
Alignment:
Q  756 ttattgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaa 855  Q
    |||||||| ||||||| || |||||||||||||||| ||||||||| ||| | ||||| |||||||||| ||| | | | || ||||| |||||||||||    
T  22155941 ttattgactaatacctaaacttcgtccttgaattttcaaaaatcggccaaattcgtccatgaattttgcaaaatagctattttgtccctgaatttacaaa 22155842  T
Q  856 atgtcaatcaaatcagtccctccg-ttaagttggtctgttaacggaggtgacttgtaacgttaac 919  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||    
T  22155841 atgtcaatcaaatcagtccctccgtttaagttgctctgttaacggaggtgacgtgtaacgttaac 22155777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 756 - 919
Target Start/End: Complemental strand, 22211856 - 22211692
Alignment:
Q  756 ttattgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaa 855  Q
    |||||||| ||||||| || |||||||||||||||| ||||||||| ||| | ||||| |||||||||| ||| | | | || ||||| |||||||||||    
T  22211856 ttattgactaatacctaaacttcgtccttgaattttcaaaaatcggccaaattcgtccatgaattttgcaaaatagctattttgtccctgaatttacaaa 22211757  T
Q  856 atgtcaatcaaatcagtccctccg-ttaagttggtctgttaacggaggtgacttgtaacgttaac 919  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||    
T  22211756 atgtcaatcaaatcagtccctccgtttaagttgctctgttaacggaggtgacgtgtaacgttaac 22211692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 765 - 919
Target Start/End: Original strand, 23904587 - 23904741
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||||||||||||||||||| ||||||||||||| | |||| ||||||||||| ||| | | | |||||||  ||||||||||||||||||||    
T  23904587 aatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtctctgaattttgcaaaatagctatttagtccatgaatttacaaaatgtcaatc 23904686  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaac 919  Q
    |||||||||||||| ||||||| ||| ||||| | ||||||| ||||||||||||    
T  23904687 aaatcagtccctccattaagttagtccgttaaggaaggtgacgtgtaacgttaac 23904741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 765 - 919
Target Start/End: Original strand, 38549551 - 38549705
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||| ||||||||||||||||||| ||||||| | ||| | ||||||||||||||| |||| ||| | ||| |||  |||||||||||||||| |||    
T  38549551 aataccttaaattcgtccttgaattttcaaaaatcagccaagttcgtccctgaattttgtgaaatatctatttaatcctcgaatttacaaaatgtccatc 38549650  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaac 919  Q
    |||||||||||| ||||||||||||||||||||| ||||||| |||| |||||||    
T  38549651 aaatcagtcccttcgttaagttggtctgttaacgaaggtgacgtgtaccgttaac 38549705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 758 - 880
Target Start/End: Complemental strand, 27666192 - 27666070
Alignment:
Q  758 attgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaat 857  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||| ||||||   |||     
T  27666192 attgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaac 27666093  T
Q  858 gtcaatcaaatcagtccctccgt 880  Q
    ||| |||||||| ||||||||||    
T  27666092 gtccatcaaatccgtccctccgt 27666070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 770 - 955
Target Start/End: Complemental strand, 13039722 - 13039536
Alignment:
Q  770 ctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatcaaatc 869  Q
    ||||| |||||||||||||||| |||||||  |||| | ||||||| |||||||||||| | | | |||||||| |||||| ||||||||||||||||||    
T  13039722 ctcaagttcgtccttgaattttcaaaaatcaatcaaattcgtccctaaattttgcgaaataactatttagtccctgaattttcaaaatgtcaatcaaatc 13039623  T
Q  870 agtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagc 955  Q
    ||||| |  |||||||||| |||||||| |||||||| | || |||||| | || ||||  |||||||||| ||||| |||||||||    
T  13039622 agtccatatgttaagttggcctgttaacagaggtgacgtttaccgttaaccgcttacaagacttaccacgttagatgtcacgcaagc 13039536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 765 - 850
Target Start/End: Original strand, 56334 - 56419
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    |||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||| |||||||||||||| ||||||    
T  56334 aatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 56419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 765 - 850
Target Start/End: Complemental strand, 29996634 - 29996549
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||| |||| ||||||    
T  29996634 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattaatccctgaattt 29996549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 765 - 880
Target Start/End: Original strand, 20478046 - 20478161
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||||||| | ||||||||||||||||||||||| ||||| ||| |||||||||| ||||| |||||||||||||| ||||||   | | ||| |||    
T  20478046 aatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtacctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatc 20478145  T
Q  865 aaatcagtccctccgt 880  Q
    ||||||||||||||||    
T  20478146 aaatcagtccctccgt 20478161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 765 - 958
Target Start/End: Original strand, 37791658 - 37791852
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||||| || |||||| || |||||| ||||||| | ||| | | ||||  |||||||| ||| ||| | ||||||||  |||||  ||||||||||||    
T  37791658 aatacctaaacttcgtctttaaattttaaaaaatcagccaaattcatccccaaattttgccaaatatctatttagtccctaaatttttaaaatgtcaatc 37791757  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcagg 958  Q
    |||||| ||| ||| |||||||||  |||||||||||||||| |||| |||||| | || |||| |||||||||||||||||||| ||| |||||    
T  37791758 aaatcaatccatccattaagttggcatgttaacggaggtgacgtgtaccgttaaccacttacaaggcttaccacgtcagatgccatgcaggcagg 37791852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 765 - 821
Target Start/End: Original strand, 29994910 - 29994966
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattt 821  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  29994910 aatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattt 29994966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 870 - 953
Target Start/End: Original strand, 38472369 - 38472453
Alignment:
Q  870 agtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaa 953  Q
    |||| ||| |||||||||||||||||||||||||||| ||||||||||| |||| |||| |||| |||||||| |||||||||||    
T  38472369 agtctctctgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggcttgccacgtcaaatgccacgcaa 38472453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 765 - 842
Target Start/End: Complemental strand, 38474263 - 38474186
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcc 842  Q
    ||||||||||||| ||||| ||||||| ||||||||||||| | |||||||||||||||||||| ||| | |||||||    
T  38474263 aatacctcaaattagtcctcgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtcc 38474186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 765 - 842
Target Start/End: Complemental strand, 39859349 - 39859272
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcc 842  Q
    ||||||||||||||||||||||||||| ||||||||| ||| |  ||||||||||||||||||| ||| | |||||||    
T  39859349 aatacctcaaattcgtccttgaattttaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtcc 39859272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 756 - 842
Target Start/End: Original strand, 45359331 - 45359417
Alignment:
Q  756 ttattgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcc 842  Q
    |||| ||| ||||||| ||||| |||| |||||||| ||||||||||||| ||||||| |||||||||||||| ||| | |||||||    
T  45359331 ttatggactaataccttaaatttgtccatgaattttaaaaaatcggtcaaatccgtccttgaattttgcgaaatatctatttagtcc 45359417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 760 - 828
Target Start/End: Complemental strand, 47386334 - 47386266
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaa 828  Q
    |||| |||||||||||||||||||| |||||| ||||||| ||||| | ||||| ||||||||||||||    
T  47386334 tgactaatacctcaaattcgtcctttaattttaaaaaatcagtcaaattcgtccttgaattttgcgaaa 47386266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 780 - 911
Target Start/End: Complemental strand, 48311803 - 48311672
Alignment:
Q  780 tccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatcaaatcagtccctccg 879  Q
    |||||||||||| ||||||| ||||| | | ||| | ||||||||||||  || ||||  |||| ||||||| |||||| |||||||||  |||| ||||    
T  48311803 tccttgaattttaaaaaatcagtcaaattcatccttaaattttgcgaaatgtctaattcatccctgaatttataaaatggcaatcaaatttgtccgtccg 48311704  T
Q  880 ttaagttggtctgttaacggaggtgacttgta 911  Q
    |||||||||  ||||||  |||||||| ||||    
T  48311703 ttaagttgggttgttaagagaggtgacatgta 48311672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 765 - 850
Target Start/End: Complemental strand, 24228529 - 24228444
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    |||||||||| ||||| |||||||||| |||||| || ||| | |||||||||||||||||||| ||| | |||||| | ||||||    
T  24228529 aatacctcaatttcgttcttgaattttaaaaaattggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaattt 24228444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 765 - 850
Target Start/End: Complemental strand, 37115646 - 37115561
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    ||||||||||||||||| ||||||||| ||||||| ||||| | ||| |||||||||||| ||| ||| | ||||| || ||||||    
T  37115646 aatacctcaaattcgtcattgaattttaaaaaatcagtcaaattcgttcctgaattttgcaaaatatctatttagtacctgaattt 37115561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 765 - 822
Target Start/End: Complemental strand, 23906352 - 23906295
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaatttt 822  Q
    |||||||||||||| |||||||||||| ||||||||| ||| | ||||||| ||||||    
T  23906352 aatacctcaaattcctccttgaattttaaaaaatcggccaaattcgtccctaaatttt 23906295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 765 - 850
Target Start/End: Complemental strand, 34777035 - 34776950
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    |||||||||||||||| ||| |||||| |||||| || ||| | | | |||||||||||||||| ||| | |||||||| ||||||    
T  34777035 aatacctcaaattcgttcttaaattttaaaaaattggccaaattcattcctgaattttgcgaaatatctatttagtccctgaattt 34776950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 765 - 850
Target Start/End: Complemental strand, 37796301 - 37796216
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    ||||||||||||| ||||||||||||| ||||||| | ||| | |||||   |||||||||||| ||| | |||||||| ||||||    
T  37796301 aatacctcaaatttgtccttgaattttcaaaaatcagccaaattcgtcctcaaattttgcgaaatatctatttagtccctgaattt 37796216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 673 - 760
Target Start/End: Complemental strand, 13010264 - 13010177
Alignment:
Q  673 cggtagcgctcatgctctcacatgagcagccttatcccatgcttcaggaagtacttttgatgtaatttctcctagtattgctattatt 760  Q
    ||||||||| ||||||||  || ||| || ||||||||||| |||| | |||||||||||||||||| ||  | ||||||||| ||||    
T  13010264 cggtagcgcccatgctcttgcacgagaagtcttatcccatgtttcacgcagtacttttgatgtaattcctttttgtattgctactatt 13010177  T

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Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 613 - 658
Target Start/End: Original strand, 34249748 - 34249792
Alignment:
Q  613 tcgtttgtttctgttggtctctttccgttttattagcccggtaacc 658  Q
    |||||||||||||||||| |||||||| ||||||||||| ||||||    
T  34249748 tcgtttgtttctgttggtttctttccg-tttattagccctgtaacc 34249792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 702 - 739
Target Start/End: Original strand, 34693145 - 34693182
Alignment:
Q  702 ccttatcccatgcttcaggaagtacttttgatgtaatt 739  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  34693145 ccttatcccatgcttcacgcagtacttttgatgtaatt 34693182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 139; Significance: 3e-72; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 760 - 1012
Target Start/End: Complemental strand, 54348 - 54090
Alignment:
Q  760 tgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgt 859  Q
    |||| ||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||| |||||||||||||||    
T  54348 tgactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgt 54249  T
Q  860 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-g 957  Q
    ||||||||| |||||||||||||| |||||| ||||||||||||||| ||| ||||||| || |||||||||||||||||||||||| |||||||||| |    
T  54248 caatcaaattagtccctccgttaatttggtccgttaacggaggtgacgtgtcacgttaacctttgacaaagcttaccacgtcagatgacacgcaagcagg 54149  T
Q  958 gacc-aactga-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    |||| |||||| |||||||||| ||||||  || ||| |||||||| ||||||||||||    
T  54148 gaccaaactgattgatttacacaaaattttgaaggacgaaattgatggatttacacaaa 54090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1712 (Bit Score: 128; Significance: 1e-65; HSPs: 1)
Name: scaffold1712
Description:

Target: scaffold1712; HSP #1
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 759 - 1012
Target Start/End: Original strand, 980 - 1239
Alignment:
Q  759 ttgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatg 858  Q
    ||||| ||||||||||| | |||||||||||||||||||||||  |||| |||||||||||| | ||||| |||||| ||||||| ||||||||||||||    
T  980 ttgactaatacctcaaaatagtccttgaattttgaaaaatcggcaaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatg 1079  T
Q  859 tcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca- 956  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||| ||| ||||||| |||||||||||| |||||||||| ||||||||||||||     
T  1080 tcaatcaaattagtccctccgttaaattggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcgtaccacgtcaaatgccacgcaagcag 1179  T
Q  957 ggacc-aactgat-gatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    ||||| || |||| ||||||||| ||||||| || ||| |||||||| ||||||||||||    
T  1180 ggaccaaattgatggatttacacaaaatttcgaaggactaaattgatggatttacacaaa 1239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 120; Significance: 8e-61; HSPs: 4)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 120; E-Value: 8e-61
Query Start/End: Original strand, 757 - 900
Target Start/End: Complemental strand, 14436 - 14293
Alignment:
Q  757 tattgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaa 856  Q
    ||||||| |||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||| |||||||||||||| ||||||||||||    
T  14436 tattgactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaa 14337  T
Q  857 tgtcaatcaaatcagtccctccgttaagttggtctgttaacgga 900  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  14336 tgtcaatcaaatcagtccctccgttaagttggtctgttaacgga 14293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 870 - 1012
Target Start/End: Complemental strand, 7217 - 7069
Alignment:
Q  870 agtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagca-ggacc-aactg 966  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  7217 agtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactg 7118  T
Q  967 a-tgatttacac-aaatttccaatgaccaaattgat-gatttacacaaa 1012  Q
    | |||||||||| |||||||||| |||||||||||| ||||||||||||    
T  7117 attgatttacacaaaatttccaaggaccaaattgatggatttacacaaa 7069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 758 - 850
Target Start/End: Original strand, 3291 - 3383
Alignment:
Q  758 attgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||| |||||||||||||| ||||||    
T  3291 attgactaatacctcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattt 3383  T

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Target: scaffold0058; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 758 - 850
Target Start/End: Original strand, 4463 - 4555
Alignment:
Q  758 attgaccaatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||| |||||||||||||| ||||||    
T  4463 attgactaatacctcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattt 4555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 115; Significance: 7e-58; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 115; E-Value: 7e-58
Query Start/End: Original strand, 765 - 957
Target Start/End: Complemental strand, 1640 - 1449
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    ||||| ||||||||||||||||||||| ||||||||||||| | |||||||||||||||  ||| | ||| |||||||| ||||||||||||||||| ||    
T  1640 aatacatcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgaaaaatagcaatttagtccctgaatttacaaaatgtcattc 1541  T
Q  865 aaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttaccacgtcagatgccacgcaagcag 957  Q
    ||||||||||||||||||||||||||||||||||||  |||| ||||||||||| |||| |||| ||||||||||||||||| |||||||||||    
T  1540 aaatcagtccctccgttaagttggtctgttaacgga--tgacgtgtaacgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcag 1449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 55; Significance: 5e-22; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 765 - 894
Target Start/End: Original strand, 106674 - 106801
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaatttacaaaatgtcaatc 864  Q
    |||| |||||||||||||||||||||  |  |||| | ||| |  |||| |||||||| ||||| ||| | |||||  | ||||||||||||||||||||    
T  106674 aatatctcaaattcgtccttgaattt--accaatcagccaaatttgtccatgaattttacgaaatatctatttagtttccgaatttacaaaatgtcaatc 106771  T
Q  865 aaatcagtccctccgttaagttggtctgtt 894  Q
    ||||||||||||||||||||||||||||||    
T  106772 aaatcagtccctccgttaagttggtctgtt 106801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 836 - 953
Target Start/End: Complemental strand, 63735 - 63617
Alignment:
Q  836 ttagtcccagaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacttgtaacgttaa-ctctgacaaagcttac 934  Q
    ||||||||  |||||| ||||| |||| ||||||||||  || |||||||||||| |||||| || ||||| || |  ||||| |||| |||| ||||||    
T  63735 ttagtccccaaatttagaaaatctcaaccaaatcagtcagtctgttaagttggtcagttaactgatgtgacatgcagtgttaacctcttacaaggcttac 63636  T
Q  935 cacgtcagatgccacgcaa 953  Q
    ||||||||||| |||||||    
T  63635 cacgtcagatgtcacgcaa 63617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 38; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 765 - 850
Target Start/End: Original strand, 8266 - 8351
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    ||||||||||||||||||||||||||| |||||| || ||| | ||| | |||||||||| ||| ||| | |||||||| ||||||    
T  8266 aatacctcaaattcgtccttgaattttaaaaaattggccaaattcgttcttgaattttgcaaaatatctatttagtccctgaattt 8351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 765 - 850
Target Start/End: Original strand, 1267 - 1352
Alignment:
Q  765 aatacctcaaattcgtccttgaattttgaaaaatcggtcaattccgtccctgaattttgcgaaaaatcaaattagtcccagaattt 850  Q
    |||||||||||| |||||||||||||| |||||| ||| || | ||||| ||||||||  |||| ||| | |||||||| ||||||    
T  1267 aatacctcaaatccgtccttgaattttaaaaaattggttaaattcgtccatgaattttatgaaatatctatttagtccctgaattt 1352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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