View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4520-Insertion-6 (Length: 273)
Name: NF4520-Insertion-6
Description: NF4520
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4520-Insertion-6 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 8 - 273
Target Start/End: Original strand, 36988090 - 36988356
Alignment:
| Q |
8 |
ttaagttcaatcaggtactgattcttaatgagaaaa-aatgagctttggtcaactctcagtagatgtttggagtttcgattaattgtgagttcggcagaa |
106 |
Q |
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| T |
36988090 |
ttaagttcaatcaggtactgattcttaatgagaaaaaaatgagctttggtcaactctcagtagatgtttggagttttgattaattgtgagtttggcagaa |
36988189 |
T |
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| Q |
107 |
tcatggtatgccaaacttatcgtcaattagaggtggaaataagttgggccgatcaaataagcctacaacctatcctacgtcaaacccagaccagactaca |
206 |
Q |
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| T |
36988190 |
tcatggtatgccaaacttatcgtcaattagaggtggaaataagttgggccgatcaaataggcctacaacctatcctacgtcaaacccagaccagactaca |
36988289 |
T |
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| Q |
207 |
agccactaaaaaacccttttaggccacaaatagtagctctcaagaatatttttagatgtttatttag |
273 |
Q |
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| T |
36988290 |
agccactaaaaaacccttttaggccacaaatagtagctctcaagaaattttttagatgtttatttag |
36988356 |
T |
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