View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4520_high_21 (Length: 207)
Name: NF4520_high_21
Description: NF4520
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4520_high_21 |
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Alignment Details
Target: chr6 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 21 - 189
Target Start/End: Complemental strand, 12731318 - 12731140
Alignment:
| Q |
21 |
tagatgaagactagtcaacttcgtcaacatg---------tcgaatgtaaaacgtgcacgaagactctgcttgtaataaatctgataattttgtctagtc |
111 |
Q |
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| T |
12731318 |
tagatgaagactagtcaacttcgtcaacatgatcaatatgtcgaatgtaaaacgtgcacgaagactctgcttgtaataaatctgataattttgtctggtc |
12731219 |
T |
|
| Q |
112 |
aagagtaatcgtaaccaaccctaatgtataatctgatggtctaa-ctcaccacaatacatcctctattttttagcgcct |
189 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
12731218 |
aagagtaatcgtaaccaaccctaatgtataatctgatggtctaacctcaccacaatacatcctctattttttagcgcct |
12731140 |
T |
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