View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4521-Insertion-1 (Length: 621)
Name: NF4521-Insertion-1
Description: NF4521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4521-Insertion-1 |
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Alignment Details
Target: chr3 (Bit Score: 590; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 590; E-Value: 0
Query Start/End: Original strand, 8 - 613
Target Start/End: Original strand, 52828507 - 52829111
Alignment:
| Q |
8 |
aaatccaatatcaaactaaaccagctataatgcataaattgactaattaaaaacagtgtgcaaaaataagcacttttctatagtactattctactaacta |
107 |
Q |
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| T |
52828507 |
aaatccaatatcaaactaaaccagctataatgcataaattgactaattaaaaacagtgtgcaaaaataagcacttttctatagtactattgtactaacta |
52828606 |
T |
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| Q |
108 |
ctaatcagataccatacgttggtcctaatatcgttcatcatcaatctttgctaatttatgcaaataaagaatcatactagtctcactgtgggggtacagt |
207 |
Q |
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| T |
52828607 |
ctaatcagataccatacgttggtcctaatatcgttcatcatcaatctttgctaatttatgcaaataaagaatcatactaatctcactgtgggggtacagt |
52828706 |
T |
|
| Q |
208 |
cgacaaataaagaaatgctacaaactccatagtgaaatggtggttaatataaacttcaaaaaagaacaataatatgaacattttccatctgaataagaaa |
307 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
52828707 |
cgacaaataaagaaatgctacaaactccatagtgaaatggtggttaatataaacttcaaaaaagaacaataatatgaacattttccatctgaata-gaaa |
52828805 |
T |
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| Q |
308 |
gttggagatctttagcttctagaccgttaaacttcaagcaaccctatgtctaatatatagggtaccaattaatcaaatggtcaaacagaatgatgtcctg |
407 |
Q |
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| T |
52828806 |
gttggagatctttagcttctagaccgttaaacttcaagcaaccctatgtctaatatatagggtaccaattaatcaaatggtcaaacagaatgatgtcctg |
52828905 |
T |
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| Q |
408 |
ctttgctagagacttttttgtcaattccagcgagacattatagttttatcattctattgaaaatagtcactacaaccactccatctggctgtaatttaca |
507 |
Q |
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| T |
52828906 |
ctttgctagagacttttttgtcaattccagcgagacattatagttttatcattctattgaaaatagtcactacaaccactccatctggctgtaatttaca |
52829005 |
T |
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| Q |
508 |
caaatatacttattgacaaatgagtttataagtacggctaatcacctattaacctaaacagttcatattttccaggtttccatgtcagatccgcctcttt |
607 |
Q |
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| T |
52829006 |
caaatatacttattgacaaatgagtttataagtacggctaatcacctattaacctaaacagttcatattttccaggtttccatgtcagatccgcctcttt |
52829105 |
T |
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| Q |
608 |
cttctc |
613 |
Q |
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| T |
52829106 |
cttctc |
52829111 |
T |
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