View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4521-Insertion-4 (Length: 434)
Name: NF4521-Insertion-4
Description: NF4521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4521-Insertion-4 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 404; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 404; E-Value: 0
Query Start/End: Original strand, 7 - 434
Target Start/End: Complemental strand, 32266992 - 32266565
Alignment:
| Q |
7 |
acaaataagatactctgaaatacaaacaccaccttccaatttttggcaattccttttaaatttgttgttatgccaatgtatgagaagaaaaatggcataa |
106 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32266992 |
acaaataagatactctgaaatacaaataccaccttccaatttttggcaattccttttaaatttgttgttatgccaatgtatgagaagaaaaatggcataa |
32266893 |
T |
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| Q |
107 |
gcaattcttggacgattagttcacttttctctactatcgttgttgccaagggaggtccattaggcattgccaaaccaaaaagaataggtcttataacaaa |
206 |
Q |
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| T |
32266892 |
gcaattcttggacgattagttcacttttctctactattgttgttgccaagggaggtccattaggcattgccaaaccaaaaagaataggtcctataacaaa |
32266793 |
T |
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| Q |
207 |
atgtaaaccaagcgcgtcgctaatagctaccataattagaacacccaaaagaacaaagacaacataaatttctttcaaaggttttccaattggtgttctt |
306 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
32266792 |
atgtaaaccaagcgcgtcgctaatagctaccataattagaacacccaaaagaacaaagacaacatagatttctttcaaaggttttccaattggtgttctt |
32266693 |
T |
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| Q |
307 |
tgaatgataaaccttgccattggtcttacaatgaaaaagaaggataaaatatatacgacgcataaacccaaggcaatgaacgcaaaaaagatatttttaa |
406 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
32266692 |
tgaatgataaaccttgccattggtcttacaatgaaaaagaaggataaaatatataagacacataaacccaaggcaatgaacgcaaaaaagatatttttaa |
32266593 |
T |
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| Q |
407 |
acttcatagttttgacttgtatttgtag |
434 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
32266592 |
acttcatagttttgacttgtatttgtag |
32266565 |
T |
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