View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4522_high_8 (Length: 201)
Name: NF4522_high_8
Description: NF4522
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4522_high_8 |
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Alignment Details
Target: chr2 (Bit Score: 149; Significance: 7e-79; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 22 - 190
Target Start/End: Original strand, 43295255 - 43295423
Alignment:
| Q |
22 |
atgcttttcgacatttcttgagaattgacgctccttactctctccaagttaccttctttctcaatccaaatatattgtcggttgtcatccttaatcatat |
121 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43295255 |
atgcttttcgacatttcttgagaattgacgctccttgttctctccaagttaccttctttctcaatccaaatatattgtcggttgtcatccttaatcatat |
43295354 |
T |
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| Q |
122 |
actcgtctctctaacacaacaaatagtcctctcgagcataatgttcaacacaggtcccctgatgatgtc |
190 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |
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| T |
43295355 |
actcgtctctctaatacaacaaatagtcctctcgagcataatgttcaacacacgtcccctgatggtgtc |
43295423 |
T |
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