View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4522_low_4 (Length: 410)

Name: NF4522_low_4
Description: NF4522
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4522_low_4
NF4522_low_4
[»] chr3 (10 HSPs)
chr3 (12-393)||(48536644-48537029)
chr3 (24-208)||(51899386-51899570)
chr3 (21-215)||(16932867-16933061)
chr3 (21-215)||(12723360-12723554)
chr3 (27-208)||(30468639-30468820)
chr3 (54-213)||(25737537-25737696)
chr3 (60-208)||(31637612-31637760)
chr3 (60-208)||(6999442-6999590)
chr3 (309-390)||(48533671-48533752)
chr3 (150-208)||(25177952-25178010)
[»] chr7 (2 HSPs)
chr7 (24-211)||(48207497-48207684)
chr7 (75-208)||(5045520-5045653)
[»] chr6 (3 HSPs)
chr6 (24-208)||(330178-330362)
chr6 (152-212)||(6816241-6816301)
chr6 (60-208)||(13997160-13997308)
[»] chr1 (6 HSPs)
chr1 (24-212)||(14585828-14586016)
chr1 (27-205)||(33737458-33737636)
chr1 (27-208)||(45274243-45274424)
chr1 (60-208)||(35322362-35322510)
chr1 (45-122)||(6663165-6663242)
chr1 (178-206)||(3215179-3215207)
[»] chr4 (7 HSPs)
chr4 (24-211)||(48254960-48255147)
chr4 (27-205)||(36480759-36480937)
chr4 (27-208)||(36220727-36220908)
chr4 (60-208)||(6682789-6682937)
chr4 (28-121)||(33037137-33037230)
chr4 (78-195)||(12904132-12904249)
chr4 (54-195)||(12701957-12702098)
[»] scaffold0479 (1 HSPs)
scaffold0479 (21-215)||(10791-10985)
[»] scaffold0570 (1 HSPs)
scaffold0570 (27-205)||(4839-5013)
[»] chr5 (6 HSPs)
chr5 (27-207)||(22697557-22697737)
chr5 (27-208)||(31089426-31089607)
chr5 (25-208)||(18678491-18678674)
chr5 (27-208)||(24442565-24442746)
chr5 (60-208)||(33304933-33305081)
chr5 (75-213)||(20864042-20864177)
[»] chr2 (5 HSPs)
chr2 (24-207)||(39648249-39648432)
chr2 (27-208)||(12997251-12997432)
chr2 (27-208)||(26423218-26423399)
chr2 (26-121)||(26999250-26999345)
chr2 (178-206)||(14150242-14150270)
[»] chr8 (1 HSPs)
chr8 (54-208)||(17904654-17904808)
[»] scaffold1476 (1 HSPs)
scaffold1476 (61-208)||(1238-1385)
[»] scaffold0233 (1 HSPs)
scaffold0233 (59-208)||(19250-19399)


Alignment Details
Target: chr3 (Bit Score: 276; Significance: 1e-154; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 12 - 393
Target Start/End: Complemental strand, 48537029 - 48536644
Alignment:
Q  12 atggacatcatccatgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagct 111  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  48537029 atggccatcatccatgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaagagacaagccaatagtgtagcccatagct 48536930  T
Q  112 tagctagggaagcattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttcctt 211  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  48536929 tagatagggaagcattatcacatgctagtttccaattgcatcttaatatcccttattgtataacttctttgattaataatgaaaagctataagcttcctt 48536830  T
Q  212 ttctnnnnnnnnnnnnnnnngatcacaaaccaaacaatgtctgcgtcccaagctg------cagggggtggctcagcgctgactatcaatatcaaagttg 305  Q
    ||||                ||||| |||||||||||||||||||||||||||||      |||||||||||||||||||||||||||||||||||||||    
T  48536829 ttct--aaaaaaataaaaaagatcataaaccaaacaatgtctgcgtcccaagctgcaggaacagggggtggctcagcgctgactatcaatatcaaagttg 48536732  T
Q  306 aacacaagtttactgtagagttggcggatccggtgatcgttgtcgctgcagattcgacaaaagcgccgagcatcgatgttgaggataa 393  Q
    ||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  48536731 aacacaagtttacggtagagttggcggatctggtgaccgttgtcgctgcagattcgacgaaagcgccgagcatcgatgttgaggataa 48536644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 24 - 208
Target Start/End: Complemental strand, 51899570 - 51899386
Alignment:
Q  24 catgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaag 123  Q
    ||||||||||| || ||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||  |||||||||||||    
T  51899570 catgattgtagacacttgttgatgaccgacttagtaaactctgatgtgagttttattaggagacaagccaatggtgttgcccataatttagctagggaag 51899471  T
Q  124 cattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc 208  Q
    || ||||||||||||||||||| ||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||||    
T  51899470 cactatcacatgctagtttccatttgcatcttaacattcctcattgtataactactttgattaataatgaaaagctataagcttc 51899386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 16933061 - 16932867
Alignment:
Q  21 atccatgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctaggg 120  Q
    |||||||||||||| || ||| | |||| ||| ||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||| ||||||||||    
T  16933061 atccatgattgtagacacttgctgatgaccgatttaacaaactctgatgtgagtttaattaggagacaagccaatggtgttgcccatagtttagctaggg 16932962  T
Q  121 aagcattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttccttttct 215  Q
    |||||||||||||||||||||||||| |  || ||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16932961 aagcattatcacatgctagtttccaactatattttaatattccacattgtataactactttgattaataatgaaaagctataagcttccttttct 16932867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 12723554 - 12723360
Alignment:
Q  21 atccatgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctaggg 120  Q
    |||||||||||||| || ||||| |||| ||| |||  |||||||||||||||||| ||||||||| ||  |||| |||| |||||||| ||||||||||    
T  12723554 atccatgattgtagacacttgttgatgaccgatttaataaactctgatgtgagtttaattaggagataaatcaatggtgttgcccatagtttagctaggg 12723455  T
Q  121 aagcattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttccttttct 215  Q
    |||||||||||||||||| |||||||||  || ||||||| ||  ||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  12723454 aagcattatcacatgctaatttccaattatattttaatattccatattgtataactactttgattaataatgaaaagctataaacttccttttct 12723360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 27 - 208
Target Start/End: Complemental strand, 30468820 - 30468639
Alignment:
Q  27 gattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcat 126  Q
    |||||||| ||| | |||||||  || ||||| |||||||||||||  || ||||||||||||||||||||||  |||||||   ||||||||||||||     
T  30468820 gattgtagacatcttttaatgactgatttagcgaactctgatgtgaagttcattaggagacaagccaatagtgctgcccataatctagctagggaagcac 30468721  T
Q  127 tatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc 208  Q
    ||   |||||||||||||| |  ||||||||||| || ||||||||   | |||| ||||||||||||||||||||||||||    
T  30468720 taaatcatgctagtttccattatcatcttaatattccacattgtattcatactttaattaataatgaaaagctataagcttc 30468639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 54 - 213
Target Start/End: Original strand, 25737537 - 25737696
Alignment:
Q  54 ttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcattatcacatgctagtttccaattgcatc 153  Q
    ||||| ||||||||||| |  ||||||||||||||| || ||| ||| ||||||||| |||||||| ||||||||   ||||||| ||||||||| ||||    
T  25737537 ttagcgaactctgatgtaaagtttattaggagacaaacctataatgttgcccatagcctagctaggaaagcattacatcatgctaatttccaatttcatc 25737636  T
Q  154 ttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttcctttt 213  Q
    |||| || || ||||||||   | ||||||||||||||||||| ||||||||||| ||||    
T  25737637 ttaacattccacattgtattcatgctttgattaataatgaaaaactataagcttcttttt 25737696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 60 - 208
Target Start/End: Original strand, 31637612 - 31637760
Alignment:
Q  60 aactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcattatcacatgctagtttccaattgcatcttaata 159  Q
    |||||||||||||  || ||||||||||||| |||| |||| || ||||| ||||||| ||||||| ||   || |||||| ||||  | |||||||| |    
T  31637612 aactctgatgtgaagttcattaggagacaagtcaatggtgttgctcatagtttagctaaggaagcactacaccacgctagtctccacattcatcttaaca 31637711  T
Q  160 tccctcattgtataacttctttgattaataatgaaaagctataagcttc 208  Q
    | || ||||||||  |||||||||| |||||||||||||||||||||||    
T  31637712 ttccacattgtatttcttctttgatcaataatgaaaagctataagcttc 31637760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 60 - 208
Target Start/End: Complemental strand, 6999590 - 6999442
Alignment:
Q  60 aactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcattatcacatgctagtttccaattgcatcttaata 159  Q
    |||||||||||||  || ||||||||||||| |||| |||| || ||||| ||||||| ||||||| ||   || |||||| ||||  | | |||||| |    
T  6999590 aactctgatgtgaagttcattaggagacaagtcaatggtgtggctcatagtttagctaaggaagcactacaccacgctagtctccacattcgtcttaaca 6999491  T
Q  160 tccctcattgtataacttctttgattaataatgaaaagctataagcttc 208  Q
    | || ||||||||  |||||||||| |||||||||||||||||||||||    
T  6999490 ttccacattgtatttcttctttgatcaataatgaaaagctataagcttc 6999442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 309 - 390
Target Start/End: Complemental strand, 48533752 - 48533671
Alignment:
Q  309 acaagtttactgtagagttggcggatccggtgatcgttgtcgctgcagattcgacaaaagcgccgagcatcgatgttgagga 390  Q
    ||||||||||| |||||||| | ||||||| || || ||||||||||||||||||  |||||||||||||| |||| |||||    
T  48533752 acaagtttactctagagttgccagatccggcgaccgctgtcgctgcagattcgacggaagcgccgagcatcaatgtcgagga 48533671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 25177952 - 25178010
Alignment:
Q  150 catcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc 208  Q
    |||||||| || || ||||||||  || ||||||| |||||||||||||||||||||||    
T  25177952 catcttaacattccacattgtatttctactttgatcaataatgaaaagctataagcttc 25178010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 132; Significance: 2e-68; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 24 - 211
Target Start/End: Original strand, 48207497 - 48207684
Alignment:
Q  24 catgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaag 123  Q
    ||||||||||| || || || |||| |||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||    
T  48207497 catgattgtagacactttttgatgaccgacttagtaaactctgatgtgagttttattaggagacaagccaatggtgttgcccatagtttagctagggaag 48207596  T
Q  124 cattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttcctt 211  Q
    || ||||||||||||||||||| ||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  48207597 cactatcacatgctagtttccatttgcatcttaacattcctcattgtataactactttgattaataatgaaaagctataagcttcctt 48207684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 5045520 - 5045653
Alignment:
Q  75 tttattaggagacaagccaatagtgtagcccatagcttagctagggaagcattatcacatgctagtttccaattgcatcttaatatccctcattgtataa 174  Q
    |||||||||||||||||||||||||| |||||||   |||||||||||||| ||   |||||||||||||| |  ||||||||||| || ||||||||      
T  5045520 tttattaggagacaagccaatagtgttgcccataatctagctagggaagcactaaatcatgctagtttccattatcatcttaatattccacattgtattc 5045619  T
Q  175 cttctttgattaataatgaaaagctataagcttc 208  Q
     | |||||||||||||||||||| ||||||||||    
T  5045620 atactttgattaataatgaaaagttataagcttc 5045653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 129; Significance: 1e-66; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 24 - 208
Target Start/End: Original strand, 330178 - 330362
Alignment:
Q  24 catgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaag 123  Q
    ||||||||||| || ||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||    
T  330178 catgattgtagacacttgttgatgaccgacttagtaaactctgatgtgagttttattaggagacaagccaatggtgttgcccatagtttagctagggaag 330277  T
Q  124 cattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc 208  Q
    || ||||||||||||||||||| ||||||||||| || ||||||||||||||| ||||||||||||||||||| |||||||||||    
T  330278 cactatcacatgctagtttccatttgcatcttaacattcctcattgtataactactttgattaataatgaaaaactataagcttc 330362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 152 - 212
Target Start/End: Complemental strand, 6816301 - 6816241
Alignment:
Q  152 tcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttccttt 212  Q
    |||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6816301 tcttaacattcctcattgtataactactttgattaataatgaaaagctataagcttccttt 6816241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 60 - 208
Target Start/End: Complemental strand, 13997308 - 13997160
Alignment:
Q  60 aactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcattatcacatgctagtttccaattgcatcttaata 159  Q
    ||||||||||| |  || ||||||||||||| |||| |||| || ||||| ||||||| ||||||| ||   || |||||| ||||  | |||||||| |    
T  13997308 aactctgatgttaagttcattaggagacaagtcaatggtgttgctcatagtttagctaaggaagcactacaccacgctagtctccacattcatcttaaca 13997209  T
Q  160 tccctcattgtataacttctttgattaataatgaaaagctataagcttc 208  Q
    | || ||||||||   ||||||||| |||||||||||||||||||||||    
T  13997208 ttccacattgtatttattctttgatcaataatgaaaagctataagcttc 13997160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 129; Significance: 1e-66; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 24 - 212
Target Start/End: Original strand, 14585828 - 14586016
Alignment:
Q  24 catgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaag 123  Q
    ||||||||||  || ||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||| |||||||||||||    
T  14585828 catgattgtaaacacttgttgatgaccgacttagcaaactctgatgtgaattttattaggagacaagccaatggtgttgcccatagtttagctagggaag 14585927  T
Q  124 cattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttccttt 212  Q
    |||||||||||||||||||||||||  |||||||||| || ||||||||||||  ||||||||||||||||||||||||||||||||||    
T  14585928 cattatcacatgctagtttccaattatatcttaatattccacattgtataactagtttgattaataatgaaaagctataagcttccttt 14586016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 27 - 205
Target Start/End: Complemental strand, 33737636 - 33737458
Alignment:
Q  27 gattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcat 126  Q
    |||||||| || ||||| |||| ||| |||| |||||||||||||||||| |||||||||||||||||| |||| |||||||| ||||||||||||||      
T  33737636 gattgtagacacttgttgatgaccgatttagtaaactctgatgtgagtttcattaggagacaagccaatggtgttgcccatagtttagctagggaagcgc 33737537  T
Q  127 tatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagc 205  Q
    ||||||||||||||||||| ||||||||||| || ||||||||||||||| |||||||||||||||||| |||||||||    
T  33737536 tatcacatgctagtttccatttgcatcttaacattcctcattgtataactactttgattaataatgaaaggctataagc 33737458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 27 - 208
Target Start/End: Complemental strand, 45274424 - 45274243
Alignment:
Q  27 gattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcat 126  Q
    |||||||| ||| | |||||||  || ||||| |||||||||||||  || ||||||||||||||||||||||  || ||||   ||||||||||||||     
T  45274424 gattgtagacatcttttaatgactgatttagcgaactctgatgtgaagttcattaggagacaagccaatagtgctgctcataatctagctagggaagcac 45274325  T
Q  127 tatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc 208  Q
    ||   |||||||||||||| |  ||||||||||| || ||||||||   | |||| ||||||||||||||||||||||||||    
T  45274324 taaatcatgctagtttccattatcatcttaatattccacattgtattcatactttaattaataatgaaaagctataagcttc 45274243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 60 - 208
Target Start/End: Original strand, 35322362 - 35322510
Alignment:
Q  60 aactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcattatcacatgctagtttccaattgcatcttaata 159  Q
    |||||||||||||  || ||||||||||||| |||| |||| || ||||| ||||||| ||||||| ||   || |||||| ||||  | |||||||| |    
T  35322362 aactctgatgtgaagttcattaggagacaagtcaatggtgttgctcatagtttagctaaggaagcactacaccacgctagtctccacattcatcttaaca 35322461  T
Q  160 tccctcattgtataacttctttgattaataatgaaaagctataagcttc 208  Q
    | || ||||||||  |||||||||| |||||||||||||||||||||||    
T  35322462 ttccacattgtatttcttctttgatcaataatgaaaagctataagcttc 35322510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 6663165 - 6663242
Alignment:
Q  45 atgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaa 122  Q
    ||||| || |||||||||||||||||||  |||||||||| ||||   |||||||| |||||||| |||| |||||||    
T  6663165 atgattgatttagcaaactctgatgtgaagtttattaggatacaatttaatagtgttgcccatagtttagttagggaa 6663242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 178 - 206
Target Start/End: Original strand, 3215179 - 3215207
Alignment:
Q  178 ctttgattaataatgaaaagctataagct 206  Q
    |||||||||||||||||||||||||||||    
T  3215179 ctttgattaataatgaaaagctataagct 3215207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 128; Significance: 5e-66; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 24 - 211
Target Start/End: Original strand, 48254960 - 48255147
Alignment:
Q  24 catgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaag 123  Q
    |||||| |||| |||||||| |||| ||| |||| ||||||||||||||||||||||||||||||||||||| |||| |||||||| |||| ||||||||    
T  48254960 catgatcgtagacatttgttgatgaccgatttagtaaactctgatgtgagttttattaggagacaagccaatggtgttgcccatagtttagttagggaag 48255059  T
Q  124 cattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttcctt 211  Q
    || ||||||||||||||||||| ||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  48255060 cactatcacatgctagtttccatttgcatcttaacattcctcattgtataactactttgattaataatgaaaagctataagcttcctt 48255147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 27 - 205
Target Start/End: Complemental strand, 36480937 - 36480759
Alignment:
Q  27 gattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcat 126  Q
    |||||||| || ||||| |||| ||| |||| |||||||||||||||||| |||||||||||||||||| |||| |||||||| ||||||||||||||      
T  36480937 gattgtagacacttgttgatgaccgatttagtaaactctgatgtgagtttcattaggagacaagccaatggtgttgcccatagtttagctagggaagcgc 36480838  T
Q  127 tatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagc 205  Q
    ||||||||||||||||||| ||||||||||| || ||||||||||||||| |||||||||||||||||| |||||||||    
T  36480837 tatcacatgctagtttccatttgcatcttaacattcctcattgtataactactttgattaataatgaaaggctataagc 36480759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 27 - 208
Target Start/End: Complemental strand, 36220908 - 36220727
Alignment:
Q  27 gattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcat 126  Q
    |||||||| ||| | |||||||  || ||||| |||||||||||||  |  ||||||||||||||||||||| | |||||||   ||||||||||||||     
T  36220908 gattgtagacatctattaatgactgatttagcgaactctgatgtgaagtccattaggagacaagccaatagtattgcccataatctagctagggaagcac 36220809  T
Q  127 tatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc 208  Q
    ||   |||||||||||||| |  ||||||||||| || ||||||||   | |||||||||||||||||||||||||||||||    
T  36220808 taaatcatgctagtttccattatcatcttaatattccacattgtattcatactttgattaataatgaaaagctataagcttc 36220727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 60 - 208
Target Start/End: Original strand, 6682789 - 6682937
Alignment:
Q  60 aactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcattatcacatgctagtttccaattgcatcttaata 159  Q
    ||||||||||| |  || ||||||||||||| |||| |||| || ||||| ||||||| ||||||| ||   || |||||| ||||  | |||||||| |    
T  6682789 aactctgatgtaaagttcattaggagacaagtcaatggtgttgctcatagtttagctaaggaagcactacaccacgctagtctccacattcatcttaaca 6682888  T
Q  160 tccctcattgtataacttctttgattaataatgaaaagctataagcttc 208  Q
    | || ||||||||  |||||||||| |||||||||||||||||||||||    
T  6682889 ttccacattgtatttcttctttgatcaataatgaaaagctataagcttc 6682937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 28 - 121
Target Start/End: Complemental strand, 33037230 - 33037137
Alignment:
Q  28 attgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctaggga 121  Q
    ||||||| ||| |||||||||   | ||| |||||||||||||||  ||||||||||||||| |||||||||| |||||||| |||||||||||    
T  33037230 attgtagacatctgttaatgactaatttaacaaactctgatgtgaagtttattaggagacaaaccaatagtgttgcccatagtttagctaggga 33037137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 195
Target Start/End: Original strand, 12904132 - 12904249
Alignment:
Q  78 attaggagacaagccaatagtgtagcccatagcttagctagggaagcattatcacatgctagtttccaattgcatcttaatatccctcattgtataactt 177  Q
    ||||||||||||||||||||||| ||| |||   || ||||||||||| ||   ||| |||||||||| |  ||||||||||| || |||| ||||  |     
T  12904132 attaggagacaagccaatagtgttgcctataatctaactagggaagcactaaatcatcctagtttccattatcatcttaatattccacattctatacata 12904231  T
Q  178 ctttgattaataatgaaa 195  Q
    ||||||||||||||||||    
T  12904232 ctttgattaataatgaaa 12904249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 54 - 195
Target Start/End: Complemental strand, 12702098 - 12701957
Alignment:
Q  54 ttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcattatcacatgctagtttccaattgcatc 153  Q
    ||||| |||||||||||||  || |||||||||||| |||||||| | ||| |||   || ||||||||||| ||   ||| |||||||||| |  ||||    
T  12702098 ttagcgaactctgatgtgaagttcattaggagacaaaccaatagttttgcctataatctaactagggaagcactaaatcatcctagtttccattatcatc 12701999  T
Q  154 ttaatatccctcattgtataacttctttgattaataatgaaa 195  Q
     |||||| || |||| ||||  | ||||||||||||||||||    
T  12701998 ctaatattccacattctatacatactttgattaataatgaaa 12701957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 115; Significance: 3e-58; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 21 - 215
Target Start/End: Original strand, 10791 - 10985
Alignment:
Q  21 atccatgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctaggg 120  Q
    |||||||||||||| || ||||| |||| ||| ||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||| ||||||| ||    
T  10791 atccatgattgtagacacttgttgatgaccgatttaacaaactctgatgtgagtttaattaggagacaagccaatcgtgttgcccatagtttagctaagg 10890  T
Q  121 aagcattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttccttttct 215  Q
    ||||||||||||||||||||||||||||  || ||||||| || |||||||||||| ||||||||||||||||||||| ||||  ||||||||||    
T  10891 aagcattatcacatgctagtttccaattatattttaatattccacattgtataactactttgattaataatgaaaagcaataaaattccttttct 10985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 27 - 205
Target Start/End: Complemental strand, 5013 - 4839
Alignment:
Q  27 gattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcat 126  Q
    |||||||| || ||||| |||| ||| |||| |||||||||||||||||| ||||| |||||||||||| |||| |||||||| |||||||    | |      
T  5013 gattgtagacacttgttgatgaccgatttagtaaactctgatgtgagtttcattagaagacaagccaatggtgttgcccatagtttagcta----aacgc 4918  T
Q  127 tatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagc 205  Q
    ||||||||||||||||||| ||||||||||| || ||||||||||||||| |||||||||||||||||| |||||||||    
T  4917 tatcacatgctagtttccatttgcatcttaacattcctcattgtataactactttgattaataatgaaaggctataagc 4839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 3e-33; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 27 - 207
Target Start/End: Complemental strand, 22697737 - 22697557
Alignment:
Q  27 gattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcat 126  Q
    |||||||| ||| | |||||||  || ||||| |||||||||||||  || ||||||||||||||||||||||| |||||||   ||||||||||||||     
T  22697737 gattgtagacatctattaatgactgatttagcgaactctgatgtgaagttcattaggagacaagccaatagtgttgcccataatctagctagggaagcac 22697638  T
Q  127 tatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagctt 207  Q
    ||   |||||||||||||| |  ||||||||||| || ||||||||   | ||||||||||||||||||||||||||||||    
T  22697637 taaatcatgctagtttccattatcatcttaatattccacattgtattcatactttgattaataatgaaaagctataagctt 22697557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 27 - 208
Target Start/End: Original strand, 31089426 - 31089607
Alignment:
Q  27 gattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcat 126  Q
    |||||||| ||| | |||||||  || ||||| |||||||||||||  || ||||||||||||||||||||||  |||||||   ||||||||||||||     
T  31089426 gattgtagacatcttttaatgactgatttagcgaactctgatgtgaagttcattaggagacaagccaatagtgctgcccataatctagctagggaagcac 31089525  T
Q  127 tatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc 208  Q
    ||   |||||||||||||| |  ||||||||||| || ||||||||   | |||| ||||||||||||||||||||||||||    
T  31089526 taaatcatgctagtttccattatcatcttaatattccacattgtattcatactttaattaataatgaaaagctataagcttc 31089607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 25 - 208
Target Start/End: Original strand, 18678491 - 18678674
Alignment:
Q  25 atgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagc 124  Q
    |||||||||| |||||||||   | ||| |||| ||||||| |||||||||| ||||||||||||||||||||||| || ||||| ||||||| |||| |    
T  18678491 atgattgtagacatttgttaggtaccgatttagtaaactctaatgtgagtttcattaggagacaagccaatagtgttgctcatagtttagctaaggaatc 18678590  T
Q  125 attatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc 208  Q
    | |||   |||||||| ||||  | |||||||| ||||  ||||||||  || |||  ||||||||||||||||||||||||||    
T  18678591 actatacaatgctagtctccatgttcatcttaacatcctacattgtatttctacttcaattaataatgaaaagctataagcttc 18678674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 27 - 208
Target Start/End: Original strand, 24442565 - 24442746
Alignment:
Q  27 gattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcat 126  Q
    |||||||| ||| | |||||||  || ||||| |||||||||||||  || |||||||||||| |||||||||| |||||||   ||||||| ||||||     
T  24442565 gattgtagacatctattaatgactgatttagcgaactctgatgtgaagttcattaggagacaaaccaatagtgttgcccataatctagctagagaagcac 24442664  T
Q  127 tatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc 208  Q
    ||   |||||||||||||| |  ||||||||||| |  ||||||||   | |||||||||||||| |||| |||||||||||    
T  24442665 taaatcatgctagtttccattatcatcttaatattctacattgtattcatactttgattaataattaaaaactataagcttc 24442746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 60 - 208
Target Start/End: Complemental strand, 33305081 - 33304933
Alignment:
Q  60 aactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcattatcacatgctagtttccaattgcatcttaata 159  Q
    |||||||||||||  || ||||||||||||| |||| |||| || ||||| ||||||| ||||||| ||   || |||||| ||||  | |||||||| |    
T  33305081 aactctgatgtgaagttcattaggagacaagtcaatggtgttgctcatagtttagctaaggaagcactacaccacgctagtctccacattcatcttaaca 33304982  T
Q  160 tccctcattgtataacttctttgattaataatgaaaagctataagcttc 208  Q
    | || ||||||||  |||||||||| |||||||||||||||||||||||    
T  33304981 ttccacattgtatttcttctttgatcaataatgaaaagctataagcttc 33304933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 20864042 - 20864177
Alignment:
Q  75 tttattaggagacaagccaatagtgtagcccatagcttagctagggaagcattatcacatgctagtttccaattgcatcttaatatccctcattgtataa 174  Q
    |||||||| ||||||||||| ||||| || |||||| |||||||||| ||||||    |||||| ||||||||| |||    | || || |||| |||      
T  20864042 tttattagaagacaagccaacagtgttgctcatagcatagctagggaggcattacataatgctattttccaatttcatt---acattccacattctattc 20864138  T
Q  175 cttctttgattaataatgaaaagctataagcttcctttt 213  Q
     | ||||||||||||||||||||||||||||||| ||||    
T  20864139 atactttgattaataatgaaaagctataagcttcttttt 20864177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 1e-32; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 24 - 207
Target Start/End: Original strand, 39648249 - 39648432
Alignment:
Q  24 catgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaag 123  Q
    ||||||||||| || ||||| ||||  || ||||| ||||| |||||||  || || | |||||| ||||||||||| |||||||| ||||||| |||||    
T  39648249 catgattgtagacacttgttgatgactgatttagcgaactcagatgtgaagttcatcaagagacaggccaatagtgttgcccatagtttagctaaggaag 39648348  T
Q  124 cattatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagctt 207  Q
    || |||   ||||||||||| | | |||||||||||| |  |||||||||||||||||||||||||| ||||||||||||||||    
T  39648349 cactatattatgctagtttcgagtagcatcttaatattctacattgtataacttctttgattaataaagaaaagctataagctt 39648432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 27 - 208
Target Start/End: Original strand, 12997251 - 12997432
Alignment:
Q  27 gattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcat 126  Q
    |||||||| ||| | |||||||  || ||||| |||||||||||||  || ||||||||||||||||||||||  |||||||   ||||||||||||||     
T  12997251 gattgtagacatcttttaatgactgatttagcgaactctgatgtgaagttcattaggagacaagccaatagtgctgcccataatctagctagggaagcac 12997350  T
Q  127 tatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc 208  Q
    ||   |||||||||||||| |  ||||||||||| || ||||||||   | |||| ||||||||||||||||||||||||||    
T  12997351 taaatcatgctagtttccattatcatcttaatattccacattgtattcatactttaattaataatgaaaagctataagcttc 12997432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 27 - 208
Target Start/End: Original strand, 26423218 - 26423399
Alignment:
Q  27 gattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcat 126  Q
    |||||||| ||| | |||||||  || ||||  |||||||||||||  || ||||||||||||||||||||||| |||||||   ||||||||||||||     
T  26423218 gattgtagacatctattaatgactgatttagtgaactctgatgtgaagttcattaggagacaagccaatagtgttgcccataatctagctagggaagcac 26423317  T
Q  127 tatcacatgctagtttccaattgcatcttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc 208  Q
    ||   |||||||||||||| |  ||||||||||| || | ||||||   | |||||||||||||||||||||||||||||||    
T  26423318 taaatcatgctagtttccattatcatcttaatattccacgttgtattcatactttgattaataatgaaaagctataagcttc 26423399  T

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Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 26 - 121
Target Start/End: Complemental strand, 26999345 - 26999250
Alignment:
Q  26 tgattgtaggcatttgttaatgatcgacttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctaggga 121  Q
    ||||||||| || ||||| ||||| || ||||  ||||||||| |||  || ||||| |||||||||||||| |  |||||||| |||||||||||    
T  26999345 tgattgtagacacttgttgatgattgatttagtgaactctgatttgaagttcattagaagacaagccaatagagccgcccatagtttagctaggga 26999250  T

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Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 178 - 206
Target Start/End: Complemental strand, 14150270 - 14150242
Alignment:
Q  178 ctttgattaataatgaaaagctataagct 206  Q
    |||||||||||||||||||||||||||||    
T  14150270 ctttgattaataatgaaaagctataagct 14150242  T

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Target: chr8 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 54 - 208
Target Start/End: Complemental strand, 17904808 - 17904654
Alignment:
Q  54 ttagcaaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcattatcacatgctagtttccaattgcatc 153  Q
    ||||| |||||||||||||  || ||||||||||||||||||||||| |||||||   ||||||||||| || ||   |||||||||||||| |  ||||    
T  17904808 ttagcgaactctgatgtgaagttcattaggagacaagccaatagtgttgcccataatctagctagggaaacactaaatcatgctagtttccattatcatc 17904709  T
Q  154 ttaatatccctcattgtataacttctttgattaataatgaaaagctataagcttc 208  Q
     |||||| || |||||||||  | |||||||||||||||||||||||||||||||    
T  17904708 ctaatattccacattgtatacatactttgattaataatgaaaagctataagcttc 17904654  T

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Target: scaffold1476 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold1476
Description:

Target: scaffold1476; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 61 - 208
Target Start/End: Complemental strand, 1385 - 1238
Alignment:
Q  61 actctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcattatcacatgctagtttccaattgcatcttaatat 160  Q
    ||||| ||||||||||| || ||||| ||| |||| |||  |  ||||| ||||||| | ||||| |||  ||||||||| ||||| | |||| ||| ||    
T  1385 actctaatgtgagttttgttcggagagaagtcaatggtgctgttcatagtttagctaagcaagcactataccatgctagtctccaaattcatcgtaacat 1286  T
Q  161 ccctcattgtataacttctttgattaataatgaaaagctataagcttc 208  Q
     || ||||||||  || |||||||||||||||||||||||||| ||||    
T  1285 tccacattgtatttctactttgattaataatgaaaagctataaacttc 1238  T

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Target: scaffold0233 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 208
Target Start/End: Complemental strand, 19399 - 19250
Alignment:
Q  59 aaactctgatgtgagttttattaggagacaagccaatagtgtagcccatagcttagctagggaagcattatcacatgctagtttccaattgcatcttaat 158  Q
    ||||||||||||||  || ||||||||||||| |||| |||| ||  |||| ||| ||| |||||||  |   ||  ||||| ||||  | |||||||||    
T  19399 aaactctgatgtgaagttcattaggagacaagtcaatggtgttgcttatagtttaactaaggaagcacaacaccacactagtctccacattcatcttaat 19300  T
Q  159 atccctcattgtataacttctttgattaataatgaaaagctataagcttc 208  Q
    || || ||||||||  || ||||||| |||||||||||||||||||||||    
T  19299 attccacattgtattcctactttgatcaataatgaaaagctataagcttc 19250  T

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