View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4523-Insertion-3 (Length: 757)

Name: NF4523-Insertion-3
Description: NF4523
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4523-Insertion-3
NF4523-Insertion-3
[»] chr6 (83 HSPs)
chr6 (8-734)||(7800715-7801430)
chr6 (179-293)||(9107370-9107484)
chr6 (179-294)||(8776972-8777087)
chr6 (178-293)||(16766641-16766756)
chr6 (179-317)||(426491-426628)
chr6 (179-292)||(7938061-7938174)
chr6 (198-294)||(34595098-34595194)
chr6 (179-287)||(1681703-1681811)
chr6 (183-294)||(7977829-7977940)
chr6 (179-292)||(15489733-15489845)
chr6 (193-293)||(8365519-8365619)
chr6 (198-293)||(10770674-10770768)
chr6 (193-294)||(853858-853959)
chr6 (207-291)||(16833281-16833365)
chr6 (180-293)||(12696277-12696383)
chr6 (179-293)||(9027123-9027237)
chr6 (218-294)||(17841588-17841664)
chr6 (182-317)||(5732487-5732621)
chr6 (179-294)||(3209327-3209442)
chr6 (218-294)||(28152083-28152158)
chr6 (237-293)||(31384923-31384979)
chr6 (179-294)||(4877891-4878003)
chr6 (187-294)||(28715256-28715355)
chr6 (205-293)||(7930276-7930364)
chr6 (179-293)||(5970108-5970216)
chr6 (217-310)||(7027224-7027316)
chr6 (178-317)||(20371087-20371220)
chr6 (221-288)||(31959146-31959213)
chr6 (241-291)||(9522898-9522948)
chr6 (179-293)||(18367782-18367895)
chr6 (233-283)||(25010212-25010262)
chr6 (217-294)||(7265592-7265669)
chr6 (242-294)||(403863-403915)
chr6 (227-294)||(32978898-32978966)
chr6 (232-287)||(1191706-1191761)
chr6 (218-293)||(3398603-3398677)
chr6 (182-285)||(4118341-4118444)
chr6 (219-294)||(6898280-6898355)
chr6 (235-293)||(9911528-9911587)
chr6 (207-294)||(33001288-33001375)
chr6 (179-293)||(10294052-10294166)
chr6 (221-286)||(17302543-17302609)
chr6 (179-293)||(21395308-21395421)
chr6 (179-278)||(34225824-34225915)
chr6 (219-292)||(19044449-19044522)
chr6 (183-280)||(25096372-25096469)
chr6 (241-322)||(7151419-7151502)
chr6 (179-294)||(7377930-7378039)
chr6 (241-293)||(9025494-9025546)
chr6 (218-294)||(12627576-12627652)
chr6 (233-292)||(24645479-24645539)
chr6 (227-294)||(19040345-19040412)
chr6 (179-278)||(34290092-34290191)
chr6 (244-294)||(1700362-1700412)
chr6 (209-291)||(9658854-9658936)
chr6 (179-305)||(13851681-13851806)
chr6 (179-293)||(17327655-17327769)
chr6 (179-269)||(24115871-24115961)
chr6 (219-300)||(7996371-7996452)
chr6 (219-300)||(8022349-8022430)
chr6 (233-293)||(8713978-8714039)
chr6 (241-294)||(32511665-32511718)
chr6 (227-287)||(2117069-2117129)
chr6 (242-294)||(6327517-6327569)
chr6 (242-286)||(17341671-17341715)
chr6 (241-285)||(17435206-17435250)
chr6 (226-293)||(9195754-9195821)
chr6 (242-293)||(9617442-9617493)
chr6 (243-294)||(9629392-9629443)
chr6 (179-270)||(10339149-10339240)
chr6 (233-292)||(13360373-13360432)
chr6 (243-278)||(16388248-16388283)
chr6 (218-265)||(19147431-19147478)
chr6 (241-291)||(7086802-7086852)
chr6 (232-294)||(21924934-21924996)
chr6 (252-294)||(26402679-26402721)
chr6 (227-293)||(26562682-26562748)
chr6 (232-285)||(6349745-6349798)
chr6 (227-276)||(10842525-10842574)
chr6 (218-292)||(27904037-27904113)
chr6 (227-288)||(30866149-30866210)
chr6 (242-294)||(31579226-31579276)
chr6 (175-236)||(31673543-31673604)
[»] scaffold0027 (1 HSPs)
scaffold0027 (179-317)||(46627-46763)
[»] chr4 (61 HSPs)
chr4 (179-294)||(23292985-23293100)
chr4 (187-292)||(35157986-35158091)
chr4 (179-293)||(19482613-19482727)
chr4 (179-278)||(36635269-36635368)
chr4 (184-285)||(27706185-27706286)
chr4 (198-294)||(21945467-21945563)
chr4 (207-294)||(49430998-49431086)
chr4 (234-294)||(54580022-54580082)
chr4 (179-294)||(12895273-12895388)
chr4 (218-317)||(30298930-30299035)
chr4 (218-317)||(30327798-30327903)
chr4 (179-294)||(42640477-42640589)
chr4 (218-294)||(12797337-12797412)
chr4 (227-294)||(2361974-2362041)
chr4 (179-293)||(12708091-12708206)
chr4 (179-294)||(4157103-4157209)
chr4 (227-293)||(12895116-12895182)
chr4 (179-287)||(20633430-20633535)
chr4 (241-291)||(29205451-29205501)
chr4 (224-292)||(715608-715677)
chr4 (224-292)||(752934-753003)
chr4 (232-293)||(3947766-3947827)
chr4 (241-294)||(28964247-28964300)
chr4 (197-294)||(38847011-38847108)
chr4 (241-293)||(11596352-11596404)
chr4 (181-292)||(847898-848009)
chr4 (179-278)||(903867-903966)
chr4 (233-292)||(24613702-24613761)
chr4 (179-293)||(16303266-16303379)
chr4 (207-285)||(40481610-40481687)
chr4 (242-291)||(6485613-6485662)
chr4 (179-294)||(15029716-15029825)
chr4 (179-287)||(24343452-24343560)
chr4 (218-293)||(4383352-4383426)
chr4 (231-294)||(8423717-8423780)
chr4 (235-294)||(16073396-16073454)
chr4 (199-293)||(28084486-28084581)
chr4 (207-294)||(34306803-34306889)
chr4 (229-285)||(51701253-51701309)
chr4 (179-294)||(10499269-10499382)
chr4 (218-285)||(11651142-11651209)
chr4 (220-290)||(24543967-24544038)
chr4 (180-293)||(30982878-30982988)
chr4 (183-294)||(40179635-40179746)
chr4 (248-294)||(6879464-6879510)
chr4 (220-286)||(14126118-14126184)
chr4 (227-289)||(31800482-31800544)
chr4 (235-293)||(32273526-32273584)
chr4 (235-280)||(14465088-14465133)
chr4 (227-293)||(50280874-50280942)
chr4 (241-285)||(37203271-37203315)
chr4 (179-267)||(44081603-44081691)
chr4 (233-292)||(5775359-5775418)
chr4 (218-293)||(13783265-13783340)
chr4 (242-292)||(28000743-28000794)
chr4 (241-292)||(47263993-47264044)
chr4 (229-278)||(15724564-15724614)
chr4 (253-294)||(4157455-4157496)
chr4 (188-269)||(20521873-20521954)
chr4 (179-292)||(33950081-33950194)
chr4 (227-288)||(40613443-40613504)
[»] chr1 (98 HSPs)
chr1 (179-294)||(42359448-42359563)
chr1 (178-293)||(1486709-1486824)
chr1 (179-293)||(47989443-47989556)
chr1 (179-307)||(398756-398879)
chr1 (179-294)||(22881615-22881724)
chr1 (219-310)||(31672879-31672969)
chr1 (179-294)||(38078660-38078770)
chr1 (179-293)||(6612171-6612285)
chr1 (218-293)||(1704992-1705067)
chr1 (177-294)||(9103583-9103699)
chr1 (179-292)||(38503265-38503378)
chr1 (234-293)||(24577186-24577245)
chr1 (229-292)||(40258934-40258997)
chr1 (179-294)||(41877469-41877584)
chr1 (218-294)||(37598816-37598891)
chr1 (218-294)||(46348382-46348458)
chr1 (227-293)||(113292-113358)
chr1 (218-292)||(1815241-1815315)
chr1 (207-317)||(48450563-48450673)
chr1 (227-291)||(21378571-21378635)
chr1 (234-294)||(22515886-22515946)
chr1 (179-270)||(2896144-2896235)
chr1 (206-293)||(5376500-5376587)
chr1 (243-294)||(18337338-18337389)
chr1 (179-278)||(34298381-34298480)
chr1 (232-294)||(51410022-51410085)
chr1 (234-292)||(28273089-28273147)
chr1 (179-293)||(31694710-31694824)
chr1 (218-291)||(32434718-32434792)
chr1 (179-288)||(10577740-10577849)
chr1 (179-289)||(18471243-18471355)
chr1 (197-293)||(40917714-40917808)
chr1 (229-293)||(6332666-6332729)
chr1 (187-291)||(10572591-10572695)
chr1 (179-292)||(18190109-18190214)
chr1 (179-285)||(13011223-13011330)
chr1 (178-281)||(16297295-16297398)
chr1 (227-294)||(19058855-19058922)
chr1 (193-288)||(31015002-31015097)
chr1 (179-293)||(7918211-7918325)
chr1 (193-294)||(5927339-5927440)
chr1 (207-293)||(5944254-5944342)
chr1 (220-317)||(30359374-30359471)
chr1 (227-291)||(32461465-32461529)
chr1 (220-292)||(36878447-36878519)
chr1 (181-308)||(9709767-9709893)
chr1 (218-293)||(18556456-18556531)
chr1 (179-332)||(29144316-29144471)
chr1 (187-289)||(48040465-48040568)
chr1 (199-269)||(1262849-1262919)
chr1 (229-291)||(1864882-1864944)
chr1 (227-293)||(9828037-9828103)
chr1 (179-287)||(3490396-3490498)
chr1 (179-292)||(6415002-6415110)
chr1 (234-293)||(17778549-17778605)
chr1 (218-294)||(24334704-24334781)
chr1 (198-286)||(14359529-14359615)
chr1 (218-270)||(16812527-16812579)
chr1 (205-293)||(20157350-20157438)
chr1 (231-291)||(23738675-23738735)
chr1 (218-293)||(35919276-35919356)
chr1 (179-239)||(48548016-48548076)
chr1 (221-292)||(27471567-27471638)
chr1 (179-269)||(609482-609572)
chr1 (232-293)||(6427459-6427523)
chr1 (227-293)||(9629900-9629966)
chr1 (227-277)||(12443476-12443526)
chr1 (220-278)||(23622304-23622362)
chr1 (232-294)||(35702587-35702649)
chr1 (226-275)||(23652991-23653040)
chr1 (232-293)||(25361884-25361945)
chr1 (241-294)||(40181878-40181931)
chr1 (244-293)||(44482240-44482289)
chr1 (237-293)||(2283669-2283725)
chr1 (232-292)||(5898267-5898327)
chr1 (227-291)||(10233246-10233310)
chr1 (227-275)||(17754304-17754352)
chr1 (218-294)||(52903233-52903309)
chr1 (220-294)||(2288168-2288240)
chr1 (218-293)||(6427334-6427409)
chr1 (227-270)||(9449031-9449074)
chr1 (220-291)||(13997869-13997940)
chr1 (235-294)||(14332641-14332700)
chr1 (195-286)||(15323124-15323215)
chr1 (179-270)||(21366043-21366134)
chr1 (246-293)||(25272494-25272541)
chr1 (218-265)||(28268192-28268239)
chr1 (218-293)||(34712383-34712458)
chr1 (219-278)||(36905982-36906041)
chr1 (179-270)||(40285677-40285768)
chr1 (220-294)||(13436444-13436518)
chr1 (252-294)||(21620973-21621015)
chr1 (218-278)||(9033022-9033083)
chr1 (241-278)||(16927200-16927237)
chr1 (226-275)||(23621963-23622012)
chr1 (179-212)||(25934573-25934606)
chr1 (252-293)||(28663626-28663667)
chr1 (252-293)||(30173762-30173803)
[»] chr5 (65 HSPs)
chr5 (183-293)||(13287399-13287509)
chr5 (179-293)||(21522695-21522809)
chr5 (179-293)||(21533261-21533375)
chr5 (191-294)||(21191055-21191158)
chr5 (179-294)||(15382422-15382539)
chr5 (218-317)||(10298553-10298656)
chr5 (179-293)||(19579646-19579760)
chr5 (200-294)||(6247588-6247682)
chr5 (219-292)||(21351906-21351979)
chr5 (179-291)||(17177025-17177137)
chr5 (179-286)||(6326304-6326411)
chr5 (180-290)||(41995417-41995525)
chr5 (188-293)||(21541984-21542089)
chr5 (227-292)||(42893353-42893418)
chr5 (193-293)||(37328844-37328944)
chr5 (179-270)||(6770488-6770579)
chr5 (227-294)||(33178018-33178085)
chr5 (218-293)||(39698525-39698600)
chr5 (218-288)||(14674253-14674323)
chr5 (220-293)||(31084309-31084382)
chr5 (235-294)||(21576744-21576803)
chr5 (179-294)||(24906300-24906415)
chr5 (198-285)||(4105221-4105310)
chr5 (231-293)||(7677702-7677764)
chr5 (179-293)||(30183494-30183608)
chr5 (218-315)||(8420011-8420107)
chr5 (208-286)||(15405062-15405138)
chr5 (179-293)||(6401443-6401557)
chr5 (227-292)||(30135306-30135372)
chr5 (227-293)||(41633728-41633794)
chr5 (193-278)||(22013373-22013458)
chr5 (179-292)||(36642763-36642875)
chr5 (232-294)||(15883985-15884048)
chr5 (179-293)||(25888293-25888409)
chr5 (241-290)||(43001807-43001856)
chr5 (229-293)||(5894833-5894897)
chr5 (241-289)||(7218271-7218319)
chr5 (219-294)||(14422889-14422962)
chr5 (218-294)||(16203794-16203870)
chr5 (242-294)||(28588673-28588725)
chr5 (237-293)||(40131624-40131680)
chr5 (219-293)||(3966488-3966562)
chr5 (205-267)||(19552569-19552631)
chr5 (193-294)||(19820395-19820494)
chr5 (179-213)||(34276802-34276836)
chr5 (244-294)||(43564891-43564941)
chr5 (229-266)||(18316952-18316989)
chr5 (241-294)||(30502387-30502440)
chr5 (241-294)||(30542730-30542783)
chr5 (241-293)||(6471889-6471941)
chr5 (233-289)||(12159951-12160007)
chr5 (227-286)||(17088277-17088337)
chr5 (227-287)||(31264431-31264491)
chr5 (197-269)||(41558707-41558779)
chr5 (179-266)||(17122994-17123080)
chr5 (227-282)||(22299492-22299546)
chr5 (179-287)||(23015995-23016105)
chr5 (227-269)||(22611761-22611803)
chr5 (220-278)||(24273045-24273103)
chr5 (220-278)||(24389111-24389169)
chr5 (232-294)||(27932233-27932295)
chr5 (232-286)||(38464371-38464425)
chr5 (220-293)||(2436908-2436981)
chr5 (242-287)||(5467984-5468029)
chr5 (252-293)||(12199948-12199989)
[»] chr7 (71 HSPs)
chr7 (180-292)||(11061077-11061189)
chr7 (179-294)||(25481847-25481962)
chr7 (188-293)||(24339596-24339701)
chr7 (193-305)||(27945000-27945112)
chr7 (179-293)||(5409836-5409950)
chr7 (228-293)||(3991318-3991383)
chr7 (220-293)||(9408334-9408407)
chr7 (179-293)||(9778453-9778559)
chr7 (179-293)||(13770636-13770750)
chr7 (174-293)||(35861898-35862023)
chr7 (227-294)||(8234139-8234206)
chr7 (218-293)||(18215186-18215261)
chr7 (193-295)||(24105638-24105739)
chr7 (221-293)||(32094020-32094093)
chr7 (208-293)||(43027469-43027554)
chr7 (232-292)||(7438704-7438764)
chr7 (232-293)||(11272586-11272649)
chr7 (179-294)||(21880099-21880212)
chr7 (241-289)||(26033465-26033513)
chr7 (218-293)||(10042921-10042996)
chr7 (179-294)||(21826218-21826333)
chr7 (183-294)||(26733253-26733364)
chr7 (179-293)||(1433399-1433513)
chr7 (234-292)||(11665441-11665499)
chr7 (179-293)||(18038945-18039058)
chr7 (198-292)||(19206014-19206108)
chr7 (227-293)||(25822648-25822714)
chr7 (180-293)||(1885519-1885632)
chr7 (221-294)||(20549778-20549851)
chr7 (180-293)||(21140982-21141095)
chr7 (179-280)||(29763187-29763288)
chr7 (237-293)||(7058429-7058485)
chr7 (198-270)||(11722121-11722193)
chr7 (227-283)||(11831425-11831481)
chr7 (179-291)||(17851376-17851488)
chr7 (226-294)||(28155562-28155630)
chr7 (227-294)||(7197296-7197363)
chr7 (190-284)||(13557750-13557847)
chr7 (219-294)||(15680794-15680869)
chr7 (234-293)||(19992001-19992060)
chr7 (207-278)||(22868015-22868086)
chr7 (207-278)||(29787384-29787455)
chr7 (221-292)||(33994199-33994270)
chr7 (227-294)||(40287356-40287422)
chr7 (234-292)||(13300410-13300468)
chr7 (220-293)||(21560484-21560562)
chr7 (207-294)||(21864779-21864868)
chr7 (241-310)||(3721100-3721168)
chr7 (174-294)||(18213032-18213153)
chr7 (241-294)||(19213810-19213863)
chr7 (218-294)||(9482918-9482994)
chr7 (242-293)||(2334256-2334309)
chr7 (179-293)||(22602710-22602824)
chr7 (179-293)||(26329382-26329496)
chr7 (179-277)||(30730982-30731080)
chr7 (219-277)||(32308105-32308163)
chr7 (220-293)||(6630912-6630985)
chr7 (198-287)||(43249957-43250046)
chr7 (232-292)||(5835245-5835305)
chr7 (207-291)||(15902795-15902879)
chr7 (248-292)||(48438560-48438604)
chr7 (241-292)||(1401032-1401083)
chr7 (242-293)||(11890919-11890970)
chr7 (234-293)||(18013074-18013133)
chr7 (242-317)||(38143231-38143305)
chr7 (179-278)||(1656629-1656720)
chr7 (229-267)||(4024022-4024060)
chr7 (218-280)||(23191880-23191942)
chr7 (233-291)||(41020495-41020553)
chr7 (241-278)||(2424621-2424658)
chr7 (208-293)||(49107795-49107879)
[»] chr3 (74 HSPs)
chr3 (179-295)||(10335284-10335400)
chr3 (179-294)||(16000015-16000130)
chr3 (179-293)||(15796294-15796408)
chr3 (179-293)||(750618-750733)
chr3 (179-294)||(21479069-21479178)
chr3 (198-293)||(28917965-28918060)
chr3 (179-317)||(35994718-35994851)
chr3 (199-294)||(55401040-55401135)
chr3 (221-294)||(10954939-10955012)
chr3 (199-294)||(8587020-8587115)
chr3 (179-285)||(3164033-3164139)
chr3 (227-293)||(34910310-34910376)
chr3 (229-317)||(7928445-7928532)
chr3 (234-317)||(21256961-21257045)
chr3 (220-291)||(20503451-20503522)
chr3 (198-293)||(41961650-41961745)
chr3 (179-293)||(4990967-4991081)
chr3 (227-293)||(14209106-14209172)
chr3 (227-293)||(28812508-28812574)
chr3 (221-290)||(4987294-4987363)
chr3 (193-294)||(8383216-8383317)
chr3 (179-292)||(10268487-10268600)
chr3 (229-294)||(51206352-51206417)
chr3 (229-293)||(1509534-1509598)
chr3 (179-293)||(14747512-14747621)
chr3 (179-287)||(24205047-24205155)
chr3 (234-290)||(26508110-26508166)
chr3 (179-294)||(7171447-7171561)
chr3 (207-294)||(26492204-26492291)
chr3 (220-293)||(14829676-14829748)
chr3 (232-293)||(49651786-49651847)
chr3 (209-293)||(14216867-14216951)
chr3 (209-293)||(14222996-14223080)
chr3 (219-294)||(25775493-25775569)
chr3 (179-287)||(34307786-34307894)
chr3 (179-294)||(25093447-25093562)
chr3 (179-293)||(11665889-11666003)
chr3 (227-293)||(34185123-34185189)
chr3 (232-293)||(27505244-27505305)
chr3 (219-291)||(17005621-17005693)
chr3 (241-293)||(25948887-25948939)
chr3 (179-295)||(10318033-10318154)
chr3 (179-293)||(39756187-39756295)
chr3 (227-293)||(14832092-14832158)
chr3 (234-294)||(8593136-8593197)
chr3 (232-277)||(14979179-14979224)
chr3 (220-269)||(40052318-40052367)
chr3 (207-267)||(2620079-2620139)
chr3 (218-294)||(18426933-18427009)
chr3 (227-287)||(29508437-29508497)
chr3 (179-295)||(38731163-38731279)
chr3 (227-294)||(8789549-8789616)
chr3 (232-291)||(55212961-55213020)
chr3 (179-292)||(3610578-3610691)
chr3 (208-293)||(9800014-9800099)
chr3 (241-286)||(11610528-11610573)
chr3 (179-224)||(14027960-14028005)
chr3 (177-214)||(17568749-17568786)
chr3 (218-270)||(8412968-8413020)
chr3 (225-293)||(15314876-15314944)
chr3 (241-305)||(49505143-49505206)
chr3 (227-278)||(12704000-12704051)
chr3 (233-292)||(22774071-22774130)
chr3 (227-294)||(35222931-35222998)
chr3 (250-292)||(3865690-3865732)
chr3 (218-294)||(32400707-32400780)
chr3 (220-294)||(33359747-33359821)
chr3 (252-294)||(40993334-40993376)
chr3 (218-263)||(3865586-3865631)
chr3 (241-278)||(11251985-11252022)
chr3 (229-278)||(11313815-11313864)
chr3 (233-278)||(11493376-11493421)
chr3 (205-278)||(25064880-25064953)
chr3 (199-292)||(32429381-32429474)
[»] scaffold0053 (1 HSPs)
scaffold0053 (179-294)||(8743-8858)
[»] chr2 (61 HSPs)
chr2 (199-317)||(19536374-19536492)
chr2 (179-293)||(30335362-30335476)
chr2 (179-286)||(21374706-21374808)
chr2 (186-293)||(15657816-15657923)
chr2 (180-293)||(23058442-23058556)
chr2 (179-294)||(2438718-2438830)
chr2 (193-336)||(20539624-20539774)
chr2 (179-293)||(34784982-34785096)
chr2 (218-294)||(15972857-15972933)
chr2 (218-294)||(37558961-37559037)
chr2 (218-293)||(18421947-18422022)
chr2 (218-293)||(30717530-30717605)
chr2 (179-292)||(26769462-26769569)
chr2 (219-292)||(18841014-18841087)
chr2 (233-293)||(974746-974806)
chr2 (218-294)||(30404849-30404925)
chr2 (180-292)||(34337182-34337289)
chr2 (179-266)||(31283993-31284080)
chr2 (190-293)||(36756344-36756447)
chr2 (227-293)||(12668423-12668489)
chr2 (180-278)||(21616708-21616806)
chr2 (220-294)||(38117158-38117232)
chr2 (241-317)||(34691782-34691857)
chr2 (241-317)||(34714194-34714269)
chr2 (179-278)||(28412295-28412394)
chr2 (234-292)||(11223864-11223922)
chr2 (209-287)||(12940941-12941019)
chr2 (227-317)||(18255957-18256046)
chr2 (178-292)||(18276465-18276579)
chr2 (232-294)||(20473320-20473382)
chr2 (207-292)||(21091696-21091781)
chr2 (194-294)||(21624226-21624327)
chr2 (218-290)||(23718010-23718082)
chr2 (218-290)||(24105682-24105754)
chr2 (218-289)||(6940239-6940310)
chr2 (218-292)||(14996224-14996299)
chr2 (219-294)||(20242726-20242801)
chr2 (218-285)||(24894373-24894440)
chr2 (218-293)||(37419727-37419802)
chr2 (227-293)||(33153417-33153483)
chr2 (232-294)||(5040730-5040794)
chr2 (232-315)||(34221478-34221558)
chr2 (227-292)||(42832277-42832342)
chr2 (220-291)||(31808063-31808134)
chr2 (240-294)||(5367198-5367252)
chr2 (232-278)||(28677907-28677953)
chr2 (221-278)||(21782833-21782890)
chr2 (236-293)||(38442309-38442366)
chr2 (241-286)||(39323271-39323316)
chr2 (179-293)||(44860273-44860379)
chr2 (241-293)||(4882696-4882748)
chr2 (179-230)||(18631462-18631513)
chr2 (220-291)||(29176495-29176566)
chr2 (241-291)||(18420436-18420486)
chr2 (256-294)||(44635520-44635558)
chr2 (237-294)||(5473331-5473388)
chr2 (240-293)||(18622612-18622665)
chr2 (179-212)||(27447082-27447115)
chr2 (198-270)||(27459991-27460063)
chr2 (232-293)||(37411244-37411305)
chr2 (242-291)||(44605141-44605190)
[»] chr8 (56 HSPs)
chr8 (179-293)||(22651921-22652035)
chr8 (179-291)||(29510306-29510418)
chr8 (179-293)||(2572056-2572170)
chr8 (179-292)||(22197743-22197856)
chr8 (218-294)||(36450753-36450829)
chr8 (179-294)||(926787-926902)
chr8 (218-293)||(15816129-15816204)
chr8 (193-293)||(13436964-13437064)
chr8 (198-294)||(18170481-18170577)
chr8 (198-294)||(18634049-18634145)
chr8 (229-293)||(25566836-25566900)
chr8 (239-294)||(4948657-4948712)
chr8 (207-294)||(20873042-20873129)
chr8 (229-293)||(8342967-8343031)
chr8 (222-294)||(24613509-24613580)
chr8 (229-317)||(31514867-31514960)
chr8 (179-292)||(4298887-4298993)
chr8 (227-293)||(8343309-8343375)
chr8 (179-292)||(4673426-4673538)
chr8 (221-294)||(22595981-22596054)
chr8 (179-294)||(24413558-24413674)
chr8 (179-293)||(24857954-24858070)
chr8 (233-292)||(29447111-29447170)
chr8 (218-293)||(30271291-30271366)
chr8 (186-292)||(28384995-28385101)
chr8 (241-294)||(30077386-30077439)
chr8 (243-300)||(40332200-40332256)
chr8 (218-294)||(5813576-5813652)
chr8 (218-290)||(25192350-25192422)
chr8 (192-292)||(31556955-31557054)
chr8 (179-287)||(44067461-44067569)
chr8 (180-294)||(4786337-4786445)
chr8 (232-287)||(18407717-18407772)
chr8 (179-278)||(24362217-24362316)
chr8 (232-287)||(41831946-41832001)
chr8 (233-293)||(17468508-17468568)
chr8 (229-293)||(21465407-21465471)
chr8 (234-294)||(44694791-44694851)
chr8 (242-293)||(11927086-11927137)
chr8 (227-294)||(13844595-13844662)
chr8 (241-292)||(20679396-20679447)
chr8 (242-293)||(24669441-24669492)
chr8 (179-278)||(36934615-36934714)
chr8 (218-285)||(41838131-41838198)
chr8 (241-294)||(3025558-3025611)
chr8 (199-268)||(3677751-3677820)
chr8 (218-291)||(7442829-7442902)
chr8 (186-291)||(7658415-7658520)
chr8 (224-293)||(11944655-11944724)
chr8 (241-294)||(34897092-34897145)
chr8 (240-292)||(14134705-14134757)
chr8 (218-262)||(24196628-24196672)
chr8 (227-290)||(31236580-31236643)
chr8 (179-278)||(37283825-37283924)
chr8 (228-278)||(4611528-4611578)
chr8 (179-224)||(43737882-43737927)
[»] scaffold0652 (1 HSPs)
scaffold0652 (180-294)||(461-575)
[»] scaffold0021 (1 HSPs)
scaffold0021 (179-290)||(130427-130538)
[»] scaffold0223 (1 HSPs)
scaffold0223 (199-293)||(20137-20231)
[»] scaffold0018 (2 HSPs)
scaffold0018 (205-292)||(178819-178907)
scaffold0018 (218-286)||(192256-192324)
[»] scaffold0011 (1 HSPs)
scaffold0011 (217-292)||(17750-17825)
[»] scaffold0306 (1 HSPs)
scaffold0306 (193-294)||(13359-13460)
[»] scaffold0152 (1 HSPs)
scaffold0152 (193-294)||(21867-21968)
[»] scaffold0103 (1 HSPs)
scaffold0103 (218-285)||(51795-51862)
[»] scaffold0003 (1 HSPs)
scaffold0003 (198-293)||(241558-241653)
[»] scaffold0361 (1 HSPs)
scaffold0361 (227-284)||(14523-14580)
[»] scaffold0793 (1 HSPs)
scaffold0793 (224-292)||(4884-4953)
[»] scaffold0025 (1 HSPs)
scaffold0025 (218-293)||(23753-23829)
[»] scaffold0007 (1 HSPs)
scaffold0007 (179-287)||(225274-225382)
[»] scaffold0171 (2 HSPs)
scaffold0171 (179-293)||(23372-23479)
scaffold0171 (221-293)||(23497-23570)
[»] scaffold0122 (2 HSPs)
scaffold0122 (227-294)||(8003-8069)
scaffold0122 (187-293)||(8619-8725)
[»] scaffold0246 (1 HSPs)
scaffold0246 (207-285)||(19549-19626)
[»] scaffold0116 (1 HSPs)
scaffold0116 (179-293)||(9843-9957)
[»] scaffold0450 (1 HSPs)
scaffold0450 (232-293)||(8635-8696)
[»] scaffold0050 (1 HSPs)
scaffold0050 (233-294)||(70277-70338)
[»] scaffold0020 (1 HSPs)
scaffold0020 (220-293)||(135312-135385)
[»] scaffold0004 (3 HSPs)
scaffold0004 (218-286)||(92791-92859)
scaffold0004 (221-292)||(123612-123686)
scaffold0004 (246-293)||(83172-83219)
[»] scaffold0136 (1 HSPs)
scaffold0136 (242-293)||(3849-3900)
[»] scaffold0227 (1 HSPs)
scaffold0227 (227-285)||(7319-7377)
[»] scaffold0066 (1 HSPs)
scaffold0066 (227-281)||(33375-33429)
[»] scaffold0722 (1 HSPs)
scaffold0722 (233-294)||(7031-7092)
[»] scaffold0083 (1 HSPs)
scaffold0083 (207-294)||(45529-45617)
[»] scaffold0019 (1 HSPs)
scaffold0019 (220-293)||(71709-71784)
[»] scaffold0049 (1 HSPs)
scaffold0049 (241-292)||(63780-63831)
[»] scaffold0044 (1 HSPs)
scaffold0044 (243-290)||(53189-53236)
[»] scaffold0022 (1 HSPs)
scaffold0022 (199-278)||(90808-90887)
[»] scaffold0008 (1 HSPs)
scaffold0008 (190-293)||(263372-263475)
[»] scaffold0311 (1 HSPs)
scaffold0311 (218-255)||(10509-10546)
[»] scaffold0036 (1 HSPs)
scaffold0036 (240-293)||(9747-9800)
[»] scaffold1528 (1 HSPs)
scaffold1528 (227-275)||(1028-1076)
[»] scaffold0236 (1 HSPs)
scaffold0236 (242-293)||(25768-25819)
[»] scaffold0126 (1 HSPs)
scaffold0126 (178-293)||(19089-19203)
[»] scaffold0009 (2 HSPs)
scaffold0009 (252-291)||(174555-174594)
scaffold0009 (252-291)||(180068-180107)
[»] scaffold0057 (1 HSPs)
scaffold0057 (227-280)||(24018-24071)


Alignment Details
Target: chr6 (Bit Score: 677; Significance: 0; HSPs: 83)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 677; E-Value: 0
Query Start/End: Original strand, 8 - 734
Target Start/End: Complemental strand, 7801430 - 7800715
Alignment:
Q  8 aaacacacattctactctgctaatacaaacaaggattcacaaattcatgttgttcaatgggatcaagaagaaaattaaagtttgtgctttatcaccaaca 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7801430 aaacacacattctactctgctaatacaaacaaggattcacaaattcatgttgttcaatgggatcaagaagaaaattaaagtttgtgctttatcaccaaca 7801331  T
Q  108 gactcggtcacaaattcatgttgttcaatgggatcaagaagaaaattaaacatatccatatcacagtcacatatgaagcacggatacggacacggatacc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7801330 gactcggtcacaaattcatgttgttcaatgggatcaagaagaaaattaaacatatccatatcacagtcacatatgaagcacggatacggacacggatacc 7801231  T
Q  208 ggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgggacacgcctaatc 307  Q
    | ||||           |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7801230 gaacac-----------taacacgccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgggacacgcctaatc 7801142  T
Q  308 cgaagagtgtgtgctccataggtcacaaccagtaacattagtacaataattatttttagagaagggaaaaatatgttcatggaaaacaacaatccctata 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7801141 cgaagagtgtgtgctccataggtcacaaccagtaacattagtacaataattatttttagagaagggaaaaatatgttcatggaaaacaagaatccctata 7801042  T
Q  408 aataaaaattatgcaagccataaacaacataccaaagaaacatagagaaagagggaacctgagagttgttcaagcgtgatgacaacggaacaaagctgct 507  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7801041 aataaaaattatgcaagccataaacaacataccaaagaaacatagagaaagagggaacctgagagttgttcaagcgtgatgacaacggaacaaagctgct 7800942  T
Q  508 gataaaggatttcacgaccctggcaaatgaaaatcacaatgtgaacgaaagaactttgatacaggttaattgaagaagaaaatgaattcgttgttaccgt 607  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7800941 gataaaggatttcacgaccctggcaaatgaaaatcacaatgtgaacgaaagaactttgatacaggttaattgaagaagaaaatgaattcgttgttaccgt 7800842  T
Q  608 gcaggaaaaaggagaaggcaccgaatcgcagaatgtgaatctttcttgatagtgaagatgcagaaacggtgatggaatttgagtttcaaggtggaaaagg 707  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7800841 gcaggaaaaaggagaaggcaccgaatcgcagaatgtgaatctttcttgatagtgaagatgcagaaacggtgatggaatttgagtttcaaggtggaaaagg 7800742  T
Q  708 attttgtttcttgtgttatagaaagag 734  Q
    |||||||||||||||||||||||||||    
T  7800741 attttgtttcttgtgttatagaaagag 7800715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 179 - 293
Target Start/End: Complemental strand, 9107484 - 9107370
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||||||||||||| |||||||| ||||||||| || ||||||||||||| |||||||| |||||||||||||||||||||| ||||||| |||||||    
T  9107484 tatgaagcacggatactgacacggacaccggacacgacacggacactaacacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaatta 9107385  T
Q  279 caagtgtcggtgtcg 293  Q
    |||||||||||||||    
T  9107384 caagtgtcggtgtcg 9107370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 179 - 294
Target Start/End: Complemental strand, 8777087 - 8776972
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||||||||||||||||| | ||||||| || |||||||| |||| ||||||||||||||||||||||||||||||| ||||||| |||||||    
T  8777087 tatgaagcacggatacggacacggacaacggacacgacacggacactgacacgccgacacaactaataatttgaaaaaatcacaaaattcagtgtaatta 8776988  T
Q  279 caagtgtcggtgtcgg 294  Q
    ||||||| ||||||||    
T  8776987 caagtgttggtgtcgg 8776972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 16766641 - 16766756
Alignment:
Q  178 atatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatt 277  Q
    |||||||||| ||||||||||||||| ||||||||| ||  ||||||| |||| |||||||| |||||||||||||||||||||||||||||| ||||||    
T  16766641 atatgaagcatggatacggacacggacaccggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatt 16766740  T
Q  278 acaagtgtcggtgtcg 293  Q
    ||||||||||||||||    
T  16766741 acaagtgtcggtgtcg 16766756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 179 - 317
Target Start/End: Complemental strand, 426628 - 426491
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||| |||||| |||||||||||||||||| || |||||||| |||| ||||||||  |||||||||||||||||||||||||| |  |||||||    
T  426628 tatgaagcatggatacagacacggataccggacacgacacggacactgacacgccgacacagttaataatttgaaaaaatcacataattaaatgtaatta 426529  T
Q  279 caagtgtcggtgtcgggacacgcctaatccgaagagtgt 317  Q
    |||||||||||||| |||||||||||||| || ||||||    
T  426528 caagtgtcggtgtc-ggacacgcctaatctgaggagtgt 426491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 179 - 292
Target Start/End: Original strand, 7938061 - 7938174
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||||||||||||||||| ||||||||| ||  ||||||| |||| |||||||| |||||||||||||||||||| |||||| || |||||||    
T  7938061 tatgaagcacggatacggacacggacaccggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaatta 7938160  T
Q  279 caagtgtcggtgtc 292  Q
     |||||||||||||    
T  7938161 taagtgtcggtgtc 7938174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 198 - 294
Target Start/End: Original strand, 34595098 - 34595194
Alignment:
Q  198 cacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||| ||||||||| || |||||| | |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  34595098 cacggacaccggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgg 34595194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 179 - 287
Target Start/End: Original strand, 1681703 - 1681811
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||||||||||||| ||||| || |||| |||| || |  |||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||    
T  1681703 tatgaagcacggatacagacacagacaccgaacacgacacatacactaacacgccgacacaactaataatttgaaaaaatcacgtaattcagtgtaatta 1681802  T
Q  279 caagtgtcg 287  Q
    |||||||||    
T  1681803 caagtgtcg 1681811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 183 - 294
Target Start/End: Complemental strand, 7977940 - 7977829
Alignment:
Q  183 aagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaag 282  Q
    ||||||||||| ||||||||| || |||||| ||  ||| ||| |||| |||||||| |||||||||||||||||| ||||||||||| |||||||||||    
T  7977940 aagcacggatatggacacggacactggacacgacatggatactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaag 7977841  T
Q  283 tgtcggtgtcgg 294  Q
    ||||||||||||    
T  7977840 tgtcggtgtcgg 7977829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 179 - 292
Target Start/End: Complemental strand, 15489845 - 15489733
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||||||||||| |||||||||  ||  |||||||| |||||||||||||  |||||||||||||||||||||||||| ||| ||||||  |||||||    
T  15489845 tatgaagcacggatgcggacacggc-acatgacacaacacggacactaacacgtcgacacaactaataatttgaaaaaattacacaattcaatgtaatta 15489747  T
Q  279 caagtgtcggtgtc 292  Q
    ||||||||||||||    
T  15489746 caagtgtcggtgtc 15489733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 193 - 293
Target Start/End: Complemental strand, 8365619 - 8365519
Alignment:
Q  193 acggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    ||||| ||||| ||| ||||| || |||||||| |||| |||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||    
T  8365619 acggatacggacaccagacacgacacggacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattacaagtgtcggtgtc 8365520  T
Q  293 g 293  Q
    |    
T  8365519 g 8365519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 198 - 293
Target Start/End: Complemental strand, 10770768 - 10770674
Alignment:
Q  198 cacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||||||| |||||| ||  ||||||| |||| || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  10770768 cacggatac-ggacacgacatggacactgacacgccaacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 10770674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 193 - 294
Target Start/End: Complemental strand, 853959 - 853858
Alignment:
Q  193 acggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    ||||| ||||| ||||||||| || ||||  || |||| |||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||    
T  853959 acggatacggacaccggacacgacacggatgctgacacgccgacacaactaataatttgaaaaaatcacataattaagtgcaattacaagtgtcggtgtc 853860  T
Q  293 gg 294  Q
    ||    
T  853859 gg 853858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 207 - 291
Target Start/End: Original strand, 16833281 - 16833365
Alignment:
Q  207 cggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgt 291  Q
    ||||||| || | |||||| |||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  16833281 cggacacgacacagacactgacacgccgacacaactaataatttgaaaaaatcacatacttcagtgtaattacaagtgtcggtgt 16833365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 180 - 293
Target Start/End: Original strand, 12696277 - 12696383
Alignment:
Q  180 atgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattac 279  Q
    ||||||||||||||||||||||||       ||| || |||||||| |||| |||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  12696277 atgaagcacggatacggacacgga-------cacgacacggacactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattac 12696369  T
Q  280 aagtgtcggtgtcg 293  Q
    ||||||| ||||||    
T  12696370 aagtgtcagtgtcg 12696383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 179 - 293
Target Start/End: Original strand, 9027123 - 9027237
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||||||| ||||||||||||||  |||||||| || |||||||| |||| |||||||  |||||||||||| | ||||||||||||| | |||||||    
T  9027123 tatgaagcaccgatacggacacggactccggacacgacacggacactgacacgccgacaccgctaataatttgagataatcacataattccgtgtaatta 9027222  T
Q  279 caagtgtcggtgtcg 293  Q
     | ||||||||||||    
T  9027223 tatgtgtcggtgtcg 9027237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 218 - 294
Target Start/End: Complemental strand, 17841664 - 17841588
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||||| |||| |||||||| ||||||||||||||||||||||||||| || ||||||||||||| |||||||||    
T  17841664 cggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgacggtgtcgg 17841588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 182 - 317
Target Start/End: Complemental strand, 5732621 - 5732487
Alignment:
Q  182 gaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaa 281  Q
    |||||| |||||| |||||||| || |||||| ||  ||||||| |||| |||||||   ||||||||||| ||||||||||| || || ||||||| |     
T  5732621 gaagcatggatacagacacggacactggacacgacatggacactgacacgccgacaccgttaataatttgagaaaatcacatattttagtgtaattatat 5732522  T
Q  282 gtgtcggtgtcgggacacgcctaatccgaagagtgt 317  Q
    ||||||||||| ||||||||||||||||| ||||||    
T  5732521 gtgtcggtgtc-ggacacgcctaatccgaggagtgt 5732487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 179 - 294
Target Start/End: Original strand, 3209327 - 3209442
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaa-aatcacataattcagcgtaatt 277  Q
    |||| |||||||||||  ||||||| ||||||||| || || ||||  |||| |||||||| ||||||||||||||| |||||||||||| || || |||    
T  3209327 tatgtagcacggatacaaacacggacaccggacacgacacg-acacagacacgccgacacagctaataatttgaaaaaaatcacataatttagtgttatt 3209425  T
Q  278 acaagtgtcggtgtcgg 294  Q
    |||||||||||||||||    
T  3209426 acaagtgtcggtgtcgg 3209442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 218 - 294
Target Start/End: Original strand, 28152083 - 28152158
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||||| |||| |||||| | ||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  28152083 cggacactgacacgccgacaaagctaataatttgaaaa-atcacataattcagtgtaattacaagtgtcggtgtcgg 28152158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 31384923 - 31384979
Alignment:
Q  237 acaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  31384923 acaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcg 31384979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 179 - 294
Target Start/End: Original strand, 4877891 - 4878003
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaa-tcacataattcagcgtaatt 277  Q
    |||||||||| ||||||||||||    ||| |||| || |||| | | ||||||||||||| ||||||||||||||||| |||||||||| ||  |||||    
T  4877891 tatgaagcacagatacggacacg----ccgaacacgacacggatagtgacacaccgacacagctaataatttgaaaaaagtcacataattaagtataatt 4877986  T
Q  278 acaagtgtcggtgtcgg 294  Q
    |||||||||||||||||    
T  4877987 acaagtgtcggtgtcgg 4878003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 187 - 294
Target Start/End: Original strand, 28715256 - 28715355
Alignment:
Q  187 acggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtc 286  Q
    ||||||||||||||||| ||||||||| |  ||||||||        |||||  |||||||||||||||||| ||||||||||| |||||||||||||||    
T  28715256 acggatacggacacggacaccggacacgatacggacact--------gacacggctaataatttgaaaaaatgacataattcagtgtaattacaagtgtc 28715347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 205 - 293
Target Start/End: Original strand, 7930276 - 7930364
Alignment:
Q  205 accggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||||||||   |||||||| |||  ||||||||| |||||||||||||||||||||||||| || | |||| |||||||||||||||    
T  7930276 accggacacagaacggacactgacatgccgacacaattaataatttgaaaaaatcacataatttagtgaaatttcaagtgtcggtgtcg 7930364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 179 - 293
Target Start/End: Complemental strand, 5970216 - 5970108
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||||||| |||||||||||||| ||||||||  || |||||||        |||||||  ||||||||||||||||||||||||||||| |||||||    
T  5970216 tatgaagcacagatacggacacggacaccggacatgacacggacacgt------cgacacagttaataatttgaaaaaatcacataattcagtgtaatta 5970123  T
Q  279 caagtgtcggtgtcg 293  Q
    ||| ||| |||||||    
T  5970122 caaatgtgggtgtcg 5970108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 217 - 310
Target Start/End: Original strand, 7027224 - 7027316
Alignment:
Q  217 tcggacactaacacaccgacacaactaataatttgaaaa-aatcacataattcagcgtaattacaagtgtcggtgtcgggacacgcctaatccga 310  Q
    ||||||||||| || |||||||  || |||||||||||| ||||||||||||||| ||||||| | |||||||||||  ||||||||||||||||    
T  7027224 tcggacactaatacgccgacacccctgataatttgaaaaaaatcacataattcagtgtaattatatgtgtcggtgtc--gacacgcctaatccga 7027316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 178 - 317
Target Start/End: Complemental strand, 20371220 - 20371087
Alignment:
Q  178 atatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatt 277  Q
    ||||||||||||||||||||||| || |||||||||     ||||| | |||| |||||||  |||||||||||| |||||||||||| |||  || |||    
T  20371220 atatgaagcacggatacggacacagaaaccggacac-----ggacattgacacgccgacaccgctaataatttgagaaaatcacataactcaatgtgatt 20371126  T
Q  278 acaagtgtcggtgtcgggacacgcctaatccgaagagtgt 317  Q
    | | ||||||||||| | ||| ||||||||||| ||||||    
T  20371125 atatgtgtcggtgtc-gaacaagcctaatccgaggagtgt 20371087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 221 - 288
Target Start/End: Original strand, 31959146 - 31959213
Alignment:
Q  221 acactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcgg 288  Q
    ||||| |||| ||| |||| |||||||||||||||||||||||||| ||| |||||||||||||||||    
T  31959146 acactgacacgccgtcacagctaataatttgaaaaaatcacataatgcagtgtaattacaagtgtcgg 31959213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 241 - 291
Target Start/End: Original strand, 9522898 - 9522948
Alignment:
Q  241 ctaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgt 291  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  9522898 ctaataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgt 9522948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 179 - 293
Target Start/End: Original strand, 18367782 - 18367895
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||||||||||||||||| ||||||||| ||  ||||||  |||| |||||||| |||||  ||| | ||||||||| ||| ||| |||||||    
T  18367782 tatgaagcacggatacggacacggacaccggacacgacatggacac-gacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaatta 18367880  T
Q  279 caagtgtcggtgtcg 293  Q
     | ||||||||||||    
T  18367881 tatgtgtcggtgtcg 18367895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 233 - 283
Target Start/End: Complemental strand, 25010262 - 25010212
Alignment:
Q  233 cgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagt 283  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  25010262 cgacacagctaataatttgaaaaaatcacataattcagcgttattacaagt 25010212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 217 - 294
Target Start/End: Complemental strand, 7265669 - 7265592
Alignment:
Q  217 tcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    ||||||||| |||| || ||||  |||||||||||| ||||||||||||||||| ||||||| | |||||||||||||    
T  7265669 tcggacactgacacgccaacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgg 7265592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 242 - 294
Target Start/End: Complemental strand, 403915 - 403863
Alignment:
Q  242 taataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||||||||||||||||||||||| || |||| ||||||||||||||||||    
T  403915 taataatttgaaaaaatcacataatttagtgtaactacaagtgtcggtgtcgg 403863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 227 - 294
Target Start/End: Complemental strand, 32978966 - 32978898
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaat-cacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||| |||||||| |||||||||||||||||  ||||||||| || |||||||||||||||||||||||    
T  32978966 acacgccgacacagctaataatttgaaaaaaaacacataattaagtgtaattacaagtgtcggtgtcgg 32978898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 232 - 287
Target Start/End: Complemental strand, 1191761 - 1191706
Alignment:
Q  232 ccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcg 287  Q
    |||||||| |||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  1191761 ccgacacagctaataatttgaaaaattcacaaaattcagtgtaattacaagtgtcg 1191706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 218 - 293
Target Start/End: Original strand, 3398603 - 3398677
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||||| |||| |||||||| ||||||||||| |||||||| ||||||||| ||||||| |||| |||||||||    
T  3398603 cggacactgacacgccgacacagctaataatttg-aaaaatcatataattcagtgtaattataagtatcggtgtcg 3398677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 182 - 285
Target Start/End: Complemental strand, 4118444 - 4118341
Alignment:
Q  182 gaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaa 281  Q
    ||||||| |||||||||||||| ||||||||| || || | | ||||||  ||| | |  |||||||||||||||||||||||||| |  ||||||||||    
T  4118444 gaagcactgatacggacacggacaccggacacgacacgtatattaacacgacgatatagttaataatttgaaaaaatcacataattaaatgtaattacaa 4118345  T
Q  282 gtgt 285  Q
    ||||    
T  4118344 gtgt 4118341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 219 - 294
Target Start/End: Complemental strand, 6898355 - 6898280
Alignment:
Q  219 ggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    ||||||| |||| | |||||  ||||||||||||| |||| |||||||| || |||||||||||||||||||||||    
T  6898355 ggacactgacacgctgacacgtctaataatttgaacaaattacataattaagtgtaattacaagtgtcggtgtcgg 6898280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 235 - 293
Target Start/End: Complemental strand, 9911587 - 9911528
Alignment:
Q  235 acacaactaataatttgaaa-aaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||| |||||||||| ||| |||||||||||||||| ||||||||||||||||||||||    
T  9911587 acacagctaataatttaaaagaaatcacataattcagtgtaattacaagtgtcggtgtcg 9911528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 33001375 - 33001288
Alignment:
Q  207 cggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||||||| ||| || | |||| |||||||  ||||||||||||||||||||||||||| |  ||||||| | |||||||||||||    
T  33001375 cggacacaacacggtcaatgacacgccgacactgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtcggtgtcgg 33001288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 293
Target Start/End: Original strand, 10294052 - 10294166
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||||||||||||||| | ||||||||| || |||| ||| |||  |||| ||  |||||||||||| | |||| |||| ||||  |||||||    
T  10294052 tatgaagcacggatacggacacgaacaccggacacgacacggatactgacatgccgataccgctaataatttgagataatcgcatatttcaatgtaatta 10294151  T
Q  279 caagtgtcggtgtcg 293  Q
     | ||||||||||||    
T  10294152 tatgtgtcggtgtcg 10294166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 221 - 286
Target Start/End: Original strand, 17302543 - 17302609
Alignment:
Q  221 acactaacacaccgacacaactaataatttgaaaa-aatcacataattcagcgtaattacaagtgtc 286  Q
    ||||| |||| | |||||||||||||||||||||| ||||||||||||||  |||||||||||||||    
T  17302543 acactgacacgctgacacaactaataatttgaaaaaaatcacataattcaatgtaattacaagtgtc 17302609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 293
Target Start/End: Complemental strand, 21395421 - 21395308
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||||||||||||| ||||| || |||||| |  ||  ||||||  |||| || ||||  |||||||||||| ||||| |||||||| || |||||||    
T  21395421 tatgaagcacggatacagacacagacaccggatatgacatggacaccgacacgccaacaccgctaataatttgagaaaat-acataatttagtgtaatta 21395323  T
Q  279 caagtgtcggtgtcg 293  Q
    |||||||||||||||    
T  21395322 caagtgtcggtgtcg 21395308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 278
Target Start/End: Complemental strand, 34225915 - 34225824
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||||||||||||||||| || |||||| |   |||||||        |||||||||||||||||||||||||| |||||||||| |||||||    
T  34225915 tatgaagcacggatacggacacggacactggacacgataaggacact--------gacacaactaataatttgaaaaaatcgcataattcagtgtaatta 34225824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 219 - 292
Target Start/End: Original strand, 19044449 - 19044522
Alignment:
Q  219 ggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    ||||||| |||| ||||||| ||||||||||||| || |||||||||||||| || |||| | |||||||||||    
T  19044449 ggacactgacacgccgacacgactaataatttgagaatatcacataattcagtgttattatatgtgtcggtgtc 19044522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 183 - 280
Target Start/End: Original strand, 25096372 - 25096469
Alignment:
Q  183 aagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattaca 280  Q
    ||||||| ||||||||||||| | |||| ||||| | |||||  ||||  |||||| ||||||||||||| |||||||||||||  || |||||||||    
T  25096372 aagcacgtatacggacacggacatcggatacaacacagacaccgacacgacgacaccactaataatttgagaaaatcacataatctagtgtaattaca 25096469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 241 - 322
Target Start/End: Original strand, 7151419 - 7151502
Alignment:
Q  241 ctaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc--gggacacgcctaatccgaagagtgtgtgct 322  Q
    ||||||||||||||||||||||||||| || ||||||| | |||| ||||||  ||||||||||| || ||| |||||| ||||    
T  7151419 ctaataatttgaaaaaatcacataattaagtgtaattatatgtgttggtgtcgtgggacacgccttatgcgaggagtgtctgct 7151502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 294
Target Start/End: Original strand, 7377930 - 7378039
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||||||||||||||||| | || |||||||||||| | |||||       |||||||  |||| ||||||| ||||||||||||||||  |||||||    
T  7377930 tatgaagcacggatacggacccagacaccggacacaacacagacacc------ccgacaccgctaaaaatttgagaaaatcacataattcaatgtaatta 7378023  T
Q  279 caagtgtcggtgtcgg 294  Q
     | |||||||||||||    
T  7378024 tatgtgtcggtgtcgg 7378039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 241 - 293
Target Start/End: Complemental strand, 9025546 - 9025494
Alignment:
Q  241 ctaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||||||||| ||||||||||||||||| ||||||| | ||||||||||||    
T  9025546 ctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 9025494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 294
Target Start/End: Complemental strand, 12627652 - 12627576
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||| ||||||||||| ||  |||||||| ||||||||||||||||||||| ||||| | | |||||| ||||||    
T  12627652 cggacagtaacacaccgaaactcctaataatgtgaaaaaatcacataattcagtgtaataatatgtgtcgatgtcgg 12627576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 233 - 292
Target Start/End: Original strand, 24645479 - 24645539
Alignment:
Q  233 cgacacaactaataatttgaaaa-aatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    ||||||| ||||||||||||||| |||||||||||||||  || |||||||||||||||||    
T  24645479 cgacacagctaataatttgaaaaaaatcacataattcagtatagttacaagtgtcggtgtc 24645539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 227 - 294
Target Start/End: Original strand, 19040345 - 19040412
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||| |||||||  |||||||||||| ||||||||||||||||| ||||||| | ||||| |||||||    
T  19040345 acacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtctgtgtcgg 19040412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 179 - 278
Target Start/End: Complemental strand, 34290191 - 34290092
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||||||| ||||||||||| || |||||| |  || |  ||||| |||  ||||||||||||||||||||  | ||||||||||||||| |||||||    
T  34290191 tatgaagcacagatacggacacagacaccggataagacacaaacactgacatgccgacacaactaataatttgcgagaatcacataattcagtgtaatta 34290092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 1700362 - 1700412
Alignment:
Q  244 ataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    ||||||| ||||||||||||| ||||| ||||||| |||||||||||||||    
T  1700362 ataatttaaaaaaatcacatatttcagtgtaattataagtgtcggtgtcgg 1700412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 209 - 291
Target Start/End: Original strand, 9658854 - 9658936
Alignment:
Q  209 gacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgt 291  Q
    ||||| || |||||||| |||| |||||||  |||||||||| | ||||||||||||||||| ||||||| |  |||||||||    
T  9658854 gacacgacacggacactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattatatttgtcggtgt 9658936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 305
Target Start/End: Original strand, 13851681 - 13851806
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||||||||| | |||||||||| |  | |||| || |||||||| ||||  ||||||  |||||||||||| ||||| || |||||||| |||||||    
T  13851681 tatgaagcacgggttcggacacggacattgaacacgacacggacactgacacgtcgacaccgctaataatttgagaaaataacgtaattcagtgtaatta 13851780  T
Q  279 caagtgtcggtgtcgggacacgcctaa 305  Q
     | |||||| ||||  |||||||||||    
T  13851781 tatgtgtcgatgtc-tgacacgcctaa 13851806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 293
Target Start/End: Complemental strand, 17327769 - 17327655
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||| ||||||||||  |||||||||||||||| ||   |||| | | || ||||||||||||| | ||||| |||||||||||||| || |||| ||    
T  17327769 tatgaaccacggatacgaccacggataccggacacgacatagacagtgatacgccgacacaactaagattttgagaaaatcacataatttagtgtaacta 17327670  T
Q  279 caagtgtcggtgtcg 293  Q
     | ||||| ||||||    
T  17327669 tatgtgtcagtgtcg 17327655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 269
Target Start/End: Complemental strand, 24115961 - 24115871
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattca 269  Q
    ||||||| |||||||| ||||| || |||| |||| ||   | |||| |||| | ||||||||||||||||| ||||||||||||||||||    
T  24115961 tatgaagtacggatacagacacagacaccgaacacgacataggcactgacacgctgacacaactaataatttcaaaaaatcacataattca 24115871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 219 - 300
Target Start/End: Complemental strand, 7996452 - 7996371
Alignment:
Q  219 ggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgggacacg 300  Q
    ||||||| |||  |||||||  |||||||||||| ||||||| ||||||||| ||||||| | | |||||||||| ||||||    
T  7996452 ggacactgacatgccgacactgctaataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgtcgcgacacg 7996371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 219 - 300
Target Start/End: Original strand, 8022349 - 8022430
Alignment:
Q  219 ggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgggacacg 300  Q
    ||||||| |||  |||||||  |||||||||||| ||||||| ||||||||| ||||||| | | |||||||||| ||||||    
T  8022349 ggacactgacatgccgacactgctaataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgtcgcgacacg 8022430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 233 - 293
Target Start/End: Original strand, 8713978 - 8714039
Alignment:
Q  233 cgacacaactaataatttgaaaa-aatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||||  |||||||||||||| ||||||||||||||| |||||||||| ||| |||||||    
T  8713978 cgacacagttaataatttgaaaaaaatcacataattcagtgtaattacaaatgtgggtgtcg 8714039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 241 - 294
Target Start/End: Complemental strand, 32511718 - 32511665
Alignment:
Q  241 ctaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||||||| | ||||||||||||||||| ||||||| |||||| ||||||||    
T  32511718 ctaataatttaagaaaatcacataattcagtgtaattataagtgttggtgtcgg 32511665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 227 - 287
Target Start/End: Original strand, 2117069 - 2117129
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcg 287  Q
    |||| |||||||  |||||||||||||||||||||||||||||  | ||||| ||||||||    
T  2117069 acactccgacacctctaataatttgaaaaaatcacataattcaatgcaattataagtgtcg 2117129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 242 - 294
Target Start/End: Complemental strand, 6327569 - 6327517
Alignment:
Q  242 taataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    ||||||||||||||||| | |||||| || |||||||||||||||| ||||||    
T  6327569 taataatttgaaaaaattatataattaagtgtaattacaagtgtcgatgtcgg 6327517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 17341715 - 17341671
Alignment:
Q  242 taataatttgaaaaaatcacataattcagcgtaattacaagtgtc 286  Q
    ||||||||||| ||||||||||||||||| ||||||| |||||||    
T  17341715 taataatttgataaaatcacataattcagtgtaattataagtgtc 17341671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 241 - 285
Target Start/End: Original strand, 17435206 - 17435250
Alignment:
Q  241 ctaataatttgaaaaaatcacataattcagcgtaattacaagtgt 285  Q
    |||||||||| ||||||| ||||||||||| ||||||||||||||    
T  17435206 ctaataattttaaaaaattacataattcagtgtaattacaagtgt 17435250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 226 - 293
Target Start/End: Complemental strand, 9195821 - 9195754
Alignment:
Q  226 aacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||| ||||||  |||||||||||| ||||| |||||||| || ||||||| | ||||||||||||    
T  9195821 aacacatcgacactcctaataatttgagaaaatgacataatttagtgtaattatatgtgtcggtgtcg 9195754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 293
Target Start/End: Original strand, 9617442 - 9617493
Alignment:
Q  242 taataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||||||||| ||||||||||||||||  ||||||| | ||||||||||||    
T  9617442 taataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcg 9617493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 9629392 - 9629443
Alignment:
Q  243 aataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||||||| ||||||||||||||||  ||||||| | |||||||||||||    
T  9629392 aataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcgg 9629443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 270
Target Start/End: Complemental strand, 10339240 - 10339149
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcag 270  Q
    |||||||||||||||| |||| ||| || |||||| ||  | ||||| |||| |||||||  | | |||||||| |||||||||||||||||    
T  10339240 tatgaagcacggatacagacatggacacaggacacgacatgaacactgacacgccgacaccgcgattaatttgagaaaatcacataattcag 10339149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 292
Target Start/End: Complemental strand, 13360432 - 13360373
Alignment:
Q  233 cgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    |||||| |||| |||||||| ||||||||||||||||| ||||||| | || ||||||||    
T  13360432 cgacaccactagtaatttgagaaaatcacataattcagtgtaattatatgtttcggtgtc 13360373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 243 - 278
Target Start/End: Complemental strand, 16388283 - 16388248
Alignment:
Q  243 aataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||||||||||||||||||||||||| |||||||    
T  16388283 aataatttgaaaaaatcacataattcagtgtaatta 16388248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 265
Target Start/End: Complemental strand, 19147478 - 19147431
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataa 265  Q
    |||||||| |||||| |||||| |||||||||||| ||||||||||||    
T  19147478 cggacactgacacacggacacagctaataatttgagaaaatcacataa 19147431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 241 - 291
Target Start/End: Original strand, 7086802 - 7086852
Alignment:
Q  241 ctaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgt 291  Q
    |||||||||||| |||||||||||||| || ||||||| | ||||||||||    
T  7086802 ctaataatttgagaaaatcacataatttagtgtaattatatgtgtcggtgt 7086852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 232 - 294
Target Start/End: Complemental strand, 21924996 - 21924934
Alignment:
Q  232 ccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||||  |||||||||||| || |||| ||||||||| ||||||| | |||||||||||||    
T  21924996 ccgacactgctaataatttgagaatatcaaataattcagtgtaattatatgtgtcggtgtcgg 21924934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 26402721 - 26402679
Alignment:
Q  252 aaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    ||||||| ||||||||||| ||||| |||||||||||||||||    
T  26402721 aaaaaatgacataattcagtgtaatcacaagtgtcggtgtcgg 26402679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 227 - 293
Target Start/End: Original strand, 26562682 - 26562748
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||| |||||||  |||| ||||||| ||||||||||||||||| ||||||| | |||||| |||||    
T  26562682 acacgccgacactgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcg 26562748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 232 - 285
Target Start/End: Complemental strand, 6349798 - 6349745
Alignment:
Q  232 ccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgt 285  Q
    |||||| || ||||||||||||||||| ||||||||||  ||||||||| ||||    
T  6349798 ccgacataattaataatttgaaaaaattacataattcattgtaattacatgtgt 6349745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 227 - 276
Target Start/End: Original strand, 10842525 - 10842574
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaat 276  Q
    |||| |||||||  ||||||||||||||||||||||||||| || |||||    
T  10842525 acacgccgacaccgctaataatttgaaaaaatcacataatttagtgtaat 10842574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 218 - 292
Target Start/End: Complemental strand, 27904113 - 27904037
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaat--cacataattcagcgtaattacaagtgtcggtgtc 292  Q
    |||||| | |||| |||||| | |||||||||| ||||||   |||||||||||| |||||||||| ||||||||||    
T  27904113 cggacattgacacgccgacatagctaataatttaaaaaaaaaacacataattcagtgtaattacaaatgtcggtgtc 27904037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 227 - 288
Target Start/End: Complemental strand, 30866210 - 30866149
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcgg 288  Q
    ||||||| ||||  |||||||||||| ||||||||||||||||  ||||||| | |||||||    
T  30866210 acacaccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcgg 30866149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 242 - 294
Target Start/End: Complemental strand, 31579276 - 31579226
Alignment:
Q  242 taataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    ||||||||||| ||||||||||||||||| ||||||  | |||||||||||||    
T  31579276 taataatttgagaaaatcacataattcagtgtaatt--atgtgtcggtgtcgg 31579226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #83
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 31673604 - 31673543
Alignment:
Q  175 cacatatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgac 236  Q
    ||||| || |||||||||||||||||||| |||||||||  | ||||||| ||||| |||||    
T  31673604 cacatgtggagcacggatacggacacggacaccggacacggcacggacacaaacacgccgac 31673543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 80; Significance: 4e-37; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 179 - 317
Target Start/End: Original strand, 46627 - 46763
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||||||||||||||||| | ||||||| || |||||| | |||| ||||||||  ||||||||||||||||||||||||||||| |||||||    
T  46627 tatgaagcacggatacggacacggacatcggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcacataattcagtgtaatta 46726  T
Q  279 caagtgtcggtgtcgggacacgcctaatccgaagagtgt 317  Q
    ||| ||||||||||  |||||||||||||||| ||||||    
T  46727 caaatgtcggtgtc--gacacgcctaatccgaggagtgt 46763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 1e-34; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 179 - 294
Target Start/End: Complemental strand, 23293100 - 23292985
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||||||| |||||||||||||| ||||||||| || |||||| | |||| |||||||| ||||||||||||||||||||||||||||||  ||||||    
T  23293100 tatgaagcacagatacggacacggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtataatta 23293001  T
Q  279 caagtgtcggtgtcgg 294  Q
    ||||||||||||||||    
T  23293000 caagtgtcggtgtcgg 23292985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 187 - 292
Target Start/End: Complemental strand, 35158091 - 35157986
Alignment:
Q  187 acggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtc 286  Q
    ||||||||||||||||| |||||||||||| |||||||| |||| ||||| |||||||||||||| ||||||||||||||| || ||||||| |||||||    
T  35158091 acggatacggacacggacaccggacacaacacggacactgacacgccgacgcaactaataatttggaaaaatcacataatttagtgtaattataagtgtc 35157992  T
Q  287 ggtgtc 292  Q
    ||||||    
T  35157991 ggtgtc 35157986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 179 - 293
Target Start/End: Original strand, 19482613 - 19482727
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||||||||| |||| || ||| ||||| || | |||||| |||| |||||||||||||||||||||||| |||||||||||| | |||||||    
T  19482613 tatgaagcacggatacgaacacagacaccagacacgacacagacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaatta 19482712  T
Q  279 caagtgtcggtgtcg 293  Q
    ||||||| |||||||    
T  19482713 caagtgttggtgtcg 19482727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 179 - 278
Target Start/End: Original strand, 36635269 - 36635368
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||| ||||| |||||| || ||||||||| ||||||||||| |||| || |||| ||||||||||||| ||||||||||||||||| |||||||    
T  36635269 tatgaagcatggataaggacacagacaccggacacgactcggacactgacacgccaacaccactaataatttgagaaaatcacataattcagtgtaatta 36635368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 184 - 285
Target Start/End: Complemental strand, 27706286 - 27706185
Alignment:
Q  184 agcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagt 283  Q
    |||||||||||||||||||| ||| ||||| ||  ||||||| ||||  |||||||| ||||||||| |||||||||||||||| || ||||||||||||    
T  27706286 agcacggatacggacacggacaccagacacgacagggacactgacacgtcgacacaattaataatttaaaaaaatcacataatttagtgtaattacaagt 27706187  T
Q  284 gt 285  Q
    ||    
T  27706186 gt 27706185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 198 - 294
Target Start/End: Original strand, 21945467 - 21945563
Alignment:
Q  198 cacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||| ||||||||  || | |||||| |||  |||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  21945467 cacggacaccggacatgacacagacactgacatgccgacacagctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcgg 21945563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 49430998 - 49431086
Alignment:
Q  207 cggacacaactcggacactaacacaccgacacaactaataatttgaaaa-aatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    ||||||| ||||||||| | |||| |||||||| ||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||    
T  49430998 cggacacgactcggacagtgacacgccgacacagctaataatttgaaaaaaatcacataattcagtgtaattaaaagtgtcggtgtcgg 49431086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 54580082 - 54580022
Alignment:
Q  234 gacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  54580082 gacacaactaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcgg 54580022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 179 - 294
Target Start/End: Complemental strand, 12895388 - 12895273
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||| ||| |||||||| ||||| |||||| || || || ||| | |||| ||||||||| ||||||||||||||||||||||||||  | |||||||    
T  12895388 tatgaaacacagatacggatacggacaccggatacgacacgaacaatgacacgccgacacaaataataatttgaaaaaatcacataattttgtgtaatta 12895289  T
Q  279 caagtgtcggtgtcgg 294  Q
     |||||||||||||||    
T  12895288 taagtgtcggtgtcgg 12895273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 218 - 317
Target Start/End: Original strand, 30298930 - 30299035
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaa-tcacataattcagcgtaattacaagtgtcggtgt-----cgggacacgcctaatccgaa 311  Q
    |||||||| |||| |||||||| ||||||||||||||||| | ||||||||||| ||||||||||||||||||||     ||||||||| |||||||||     
T  30298930 cggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcgtgccgggacacgtctaatccgag 30299029  T
Q  312 gagtgt 317  Q
    ||||||    
T  30299030 gagtgt 30299035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 218 - 317
Target Start/End: Original strand, 30327798 - 30327903
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaa-tcacataattcagcgtaattacaagtgtcggtgt-----cgggacacgcctaatccgaa 311  Q
    |||||||| |||| |||||||| ||||||||||||||||| | ||||||||||| ||||||||||||||||||||     ||||||||| |||||||||     
T  30327798 cggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcgtgccgggacacgtctaatccgag 30327897  T
Q  312 gagtgt 317  Q
    ||||||    
T  30327898 gagtgt 30327903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 179 - 294
Target Start/End: Original strand, 42640477 - 42640589
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaa---aatcacataattcagcgtaa 275  Q
    ||||||||||||||||||||||||| |  ||||||||| |||||||       |||||||| || ||||||||||||   ||||||||||||||| ||||    
T  42640477 tatgaagcacggatacggacacggacattggacacaacacggacacg------ccgacacagctgataatttgaaaaaaaaatcacataattcagtgtaa 42640570  T
Q  276 ttacaagtgtcggtgtcgg 294  Q
    |||||||||||||||||||    
T  42640571 ttacaagtgtcggtgtcgg 42640589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 218 - 294
Target Start/End: Complemental strand, 12797412 - 12797337
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||||| |||| ||| || |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  12797412 cggacactgacacgccggcaaaactaataatttgaaaaa-tcacataattcagtgtaattacaagtgtcggtgtcgg 12797337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 227 - 294
Target Start/End: Complemental strand, 2362041 - 2361974
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    ||||||||||||| |||||||||||||||||| |||||||| || ||||||| |||||||||||||||    
T  2362041 acacaccgacacagctaataatttgaaaaaattacataatttagtgtaattaaaagtgtcggtgtcgg 2361974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 179 - 293
Target Start/End: Original strand, 12708091 - 12708206
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataa-tttgaaaaaatcacataattcagcgtaatt 277  Q
    ||||||||||| ||||||||||||| | | ||||| || | |||||| |||| | |||||||||||||| ||| ||||||| | ||||||||| ||||||    
T  12708091 tatgaagcacgaatacggacacggacatcagacacgacgcagacactgacacgcagacacaactaataatttttaaaaaatgaaataattcagtgtaatt 12708190  T
Q  278 acaagtgtcggtgtcg 293  Q
    |||||||||| |||||    
T  12708191 acaagtgtcgatgtcg 12708206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 179 - 294
Target Start/End: Original strand, 4157103 - 4157209
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||||||||||||||||| ||| ||||| || | ||||||        |||||||||||||||||||||| ||||||||||| || | |||||    
T  4157103 tatgaagcacggatacggacacggacaccagacacgacacagacact--------gacacaactaataatttgaaaa-atcacataatttagtgcaatta 4157193  T
Q  279 caagtgtcggtgtcgg 294  Q
    ||||||||||||||||    
T  4157194 caagtgtcggtgtcgg 4157209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 227 - 293
Target Start/End: Complemental strand, 12895182 - 12895116
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||| |||| ||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  12895182 acacgccgaaacagctaataatttgaaaaaatcacataattcaaagtaattacaagtgtcggtgtcg 12895116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 179 - 287
Target Start/End: Original strand, 20633430 - 20633535
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||||||||||||||||| ||| ||||| |  |||||||| ||||  ||||||  ||||||||||||||||   ||||||||||  |||||||    
T  20633430 tatgaagcacggatacggacacggacaccagacacgatacggacactgacacgtcgacaccgctaataatttgaaaaa---acataattcaatgtaatta 20633526  T
Q  279 caagtgtcg 287  Q
    |||||||||    
T  20633527 caagtgtcg 20633535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 241 - 291
Target Start/End: Original strand, 29205451 - 29205501
Alignment:
Q  241 ctaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgt 291  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  29205451 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 29205501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 224 - 292
Target Start/End: Complemental strand, 715677 - 715608
Alignment:
Q  224 ctaacacaccgacacaactaataatttgaaaaaa-tcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    |||||||||||||||| |||||||||| |||||| ||||||||||||| |||||||||||||| ||||||    
T  715677 ctaacacaccgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgttggtgtc 715608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 224 - 292
Target Start/End: Complemental strand, 753003 - 752934
Alignment:
Q  224 ctaacacaccgacacaactaataatttgaaaaaa-tcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    |||||||||||||||| |||||||||| |||||| ||||||||||||| |||||||||||||| ||||||    
T  753003 ctaacacaccgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgttggtgtc 752934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 232 - 293
Target Start/End: Complemental strand, 3947827 - 3947766
Alignment:
Q  232 ccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||||| ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  3947827 ccgacacagctaataatttgaaaaaatcgcataattcagtgtaattacaagtgtcagtgtcg 3947766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 241 - 294
Target Start/End: Complemental strand, 28964300 - 28964247
Alignment:
Q  241 ctaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  28964300 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtctgtgtcgg 28964247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 197 - 294
Target Start/End: Complemental strand, 38847108 - 38847011
Alignment:
Q  197 acacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    ||||||| | ||||||||||||  |||   |||| |||||||| |||||||||||||||||||| || |||||| ||||||||||||||| |||||||    
T  38847108 acacggacatcggacacaactcaaacatcgacactccgacacagctaataatttgaaaaaatcatattattcagtgtaattacaagtgtcagtgtcgg 38847011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 241 - 293
Target Start/End: Complemental strand, 11596404 - 11596352
Alignment:
Q  241 ctaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  11596404 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcg 11596352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 292
Target Start/End: Original strand, 847898 - 848009
Alignment:
Q  181 tgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattaca 280  Q
    ||||||||||||||||||| |||  |||||||| || | |||||| |||| ||||  |  |||||||||||| ||||| ||||||||||   ||||||||    
T  847898 tgaagcacggatacggacatggaccccggacacgacacagacactgacacgccgatgccgctaataatttgagaaaattacataattcactataattaca 847997  T
Q  281 agtgtcggtgtc 292  Q
    ||||||||||||    
T  847998 agtgtcggtgtc 848009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 179 - 278
Target Start/End: Original strand, 903867 - 903966
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||||||||||||||||   || |||| ||  |||||||| |||||||| |||   ||||||||||| ||||||||||||||||| |||||||    
T  903867 tatgaagcacggatacggacacgggcgccagacataaaacggacactgacacaccggcaccgttaataatttgagaaaatcacataattcagtgtaatta 903966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 233 - 292
Target Start/End: Complemental strand, 24613761 - 24613702
Alignment:
Q  233 cgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    |||||||||||||||||||| ||||||||||||||||  |||| ||||||||||||||||    
T  24613761 cgacacaactaataatttgagaaaatcacataattcaatgtaagtacaagtgtcggtgtc 24613702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 179 - 293
Target Start/End: Complemental strand, 16303379 - 16303266
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||| ||||| ||||| |||| |||||| |  |||||||| |||| |||||| |  ||||| ||||||||||| | |||||| || |||||||    
T  16303379 tatgaagcacg-atacgaacacgaatactggacacgatacggacactgacacgccgacaaagataatattttgaaaaaatgatataatttagtgtaatta 16303281  T
Q  279 caagtgtcggtgtcg 293  Q
    |||||||||||||||    
T  16303280 caagtgtcggtgtcg 16303266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 207 - 285
Target Start/End: Original strand, 40481610 - 40481687
Alignment:
Q  207 cggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgt 285  Q
    ||||||| || | |||||| |||| |||| ||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  40481610 cggacacgacactgacactgacacgccgatacaactaataatttgaaaa-atcacataattcagtgtaattacaagtgt 40481687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 242 - 291
Target Start/End: Complemental strand, 6485662 - 6485613
Alignment:
Q  242 taataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgt 291  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||    
T  6485662 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgt 6485613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 179 - 294
Target Start/End: Original strand, 15029716 - 15029825
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||| ||||||||||| ||| |||||||||      |||||| |||| | |||||  ||||||||||||||| |||||||||||||| |||||||    
T  15029716 tatgaagcagggatacggacatggagaccggacac------gacactgacacgcagacactgctaataatttgaaaatatcacataattcagtgtaatta 15029809  T
Q  279 caagtgtcggtgtcgg 294  Q
     | |||| ||||||||    
T  15029810 tatgtgttggtgtcgg 15029825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 179 - 287
Target Start/End: Original strand, 24343452 - 24343560
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||||| || |||||||| ||||||||| || ||||| |  |||| |||||||   ||||||||||| ||||| ||||||||||| |||||||    
T  24343452 tatgaagcacggacacagacacggacaccggacacgacacggacgccgacacgccgacacggataataatttgagaaaattacataattcagtgtaatta 24343551  T
Q  279 caagtgtcg 287  Q
     | ||||||    
T  24343552 taggtgtcg 24343560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 218 - 293
Target Start/End: Original strand, 4383352 - 4383426
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||||| ||||  ||| ||||||||||||||||||| |||||||||||||| |||||||||| |||| ||||||    
T  4383352 cggacactgacacgtcgatacaactaataatttgaaaa-atcacataattcagtgtaattacaaatgtcagtgtcg 4383426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 231 - 294
Target Start/End: Complemental strand, 8423780 - 8423717
Alignment:
Q  231 accgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    ||||||||  |||||||||||| ||||||||||||||||| ||||||| || ||||||||||||    
T  8423780 accgacaccgctaataatttgagaaaatcacataattcagtgtaattataaatgtcggtgtcgg 8423717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 235 - 294
Target Start/End: Original strand, 16073396 - 16073454
Alignment:
Q  235 acacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||| ||||||||||||||| || |||||||||| |||||||||||||||||||||||    
T  16073396 acacaagtaataatttgaaaaa-tcgcataattcagtgtaattacaagtgtcggtgtcgg 16073454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 199 - 293
Target Start/End: Original strand, 28084486 - 28084581
Alignment:
Q  199 acggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaa-aatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||| ||||||||| || | ||| || |||| |||||||| |||| |||||||||| ||||||||||||||  ||||||||||||||| ||||||    
T  28084486 acggacaccggacacgacacagacgctgacacgccgacacagctaagaatttgaaaaaaatcacataattcaatgtaattacaagtgtctgtgtcg 28084581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 34306889 - 34306803
Alignment:
Q  207 cggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||||||  | |||||| | || ||||||||||||||||||||||||| ||| |||||  || |||||||||||||||||||||||    
T  34306889 cggacacaatacagacactgatacgccgacacaactaataatttgaaaaa-tcagataatgtagtgtaattacaagtgtcggtgtcgg 34306803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 229 - 285
Target Start/End: Original strand, 51701253 - 51701309
Alignment:
Q  229 acaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgt 285  Q
    |||| |||||| |||||||||||||||||| |||||||| || ||||||||||||||    
T  51701253 acacggacacagctaataatttgaaaaaattacataattgagtgtaattacaagtgt 51701309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 179 - 294
Target Start/End: Complemental strand, 10499382 - 10499269
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||| |||||| || ||||| ||| |||||| | | |||||| ||||||||||||| |||| || |||| |||||||||||||| || |||||||    
T  10499382 tatgaagcatggatacagatacggacaccagacaca-cactgacactgacacaccgacacatctaa-aacttgagaaaatcacataatttagtgtaatta 10499285  T
Q  279 caagtgtcggtgtcgg 294  Q
     | ||||| |||||||    
T  10499284 tatgtgtcagtgtcgg 10499269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 218 - 285
Target Start/End: Complemental strand, 11651209 - 11651142
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgt 285  Q
    |||||||| ||||  ||||||| |||||||||| ||||||||||||||||||| | || |||||||||    
T  11651209 cggacactgacacgtcgacacagctaataatttaaaaaaatcacataattcagtgcaactacaagtgt 11651142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 220 - 290
Target Start/End: Original strand, 24543967 - 24544038
Alignment:
Q  220 gacactaacacaccgacacaactaataatttgaaaaaat-cacataattcagcgtaattacaagtgtcggtg 290  Q
    |||||| |||| ||||||||||||||||||| ||||||| ||| |||| ||  |||||||||||||||||||    
T  24543967 gacactgacacgccgacacaactaataatttaaaaaaatacacttaatgcattgtaattacaagtgtcggtg 24544038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 180 - 293
Target Start/End: Complemental strand, 30982988 - 30982878
Alignment:
Q  180 atgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattac 279  Q
    |||||||||||||||| ||| ||| |||||| || || |||||||  |||| ||   ||  ||||| |||||| ||||||||||| ||||| |||||||     
T  30982988 atgaagcacggatacgaacatggacaccggatacgacacggacacagacacgcc---accgctaatgatttgagaaaatcacatatttcagtgtaattat 30982892  T
Q  280 aagtgtcggtgtcg 293  Q
    ||||||||||||||    
T  30982891 aagtgtcggtgtcg 30982878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 183 - 294
Target Start/End: Complemental strand, 40179746 - 40179635
Alignment:
Q  183 aagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaag 282  Q
    ||||||| |||||||| | || |||| |||  || |||||||| ||||   ||||| | ||||| ||||||||||||||||||||||| ||||||| | |    
T  40179746 aagcacgcatacggactcagacaccgaacatgacacggacactgacacgttgacaccattaatagtttgaaaaaatcacataattcagtgtaattatatg 40179647  T
Q  283 tgtcggtgtcgg 294  Q
     |||||||||||    
T  40179646 cgtcggtgtcgg 40179635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 248 - 294
Target Start/End: Complemental strand, 6879510 - 6879464
Alignment:
Q  248 tttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||| ||||||||||||||| || |||||||||||||||||||||||    
T  6879510 tttggaaaaatcacataattaagtgtaattacaagtgtcggtgtcgg 6879464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 220 - 286
Target Start/End: Complemental strand, 14126184 - 14126118
Alignment:
Q  220 gacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtc 286  Q
    ||||||||||| |||||||   ||||||||||| ||| ||||||||||||| ||||||| |||||||    
T  14126184 gacactaacacgccgacactgttaataatttgataaagtcacataattcagtgtaattataagtgtc 14126118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 227 - 289
Target Start/End: Complemental strand, 31800544 - 31800482
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggt 289  Q
    ||||||||||||| |||||||||| ||||||| | |||||| |  ||||||||||||||||||    
T  31800544 acacaccgacacagctaataattttaaaaaattaaataatttaatgtaattacaagtgtcggt 31800482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 235 - 293
Target Start/End: Complemental strand, 32273584 - 32273526
Alignment:
Q  235 acacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||||||||||||||||||||| |||||||||||  |||||| |||| ||| |||||    
T  32273584 acacaactaataatttgaaaaaataacataattcagaataattataagtttcgatgtcg 32273526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 235 - 280
Target Start/End: Complemental strand, 14465133 - 14465088
Alignment:
Q  235 acacaactaataatttgaaaaaatcacataattcagcgtaattaca 280  Q
    ||||| |||||||||||||||||||||||||||||  |||||||||    
T  14465133 acacacctaataatttgaaaaaatcacataattcaatgtaattaca 14465088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 227 - 293
Target Start/End: Original strand, 50280874 - 50280942
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattca--gcgtaattacaagtgtcggtgtcg 293  Q
    |||| |||||||| |||||||||||||||| |||||||||| |  | ||||||||||||| ||||||||    
T  50280874 acacgccgacacagctaataatttgaaaaattcacataattaagtgtgtaattacaagtgccggtgtcg 50280942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 241 - 285
Target Start/End: Original strand, 37203271 - 37203315
Alignment:
Q  241 ctaataatttgaaaaaatcacataattcagcgtaattacaagtgt 285  Q
    |||||||||||||||||| |||||||| || ||||||||||||||    
T  37203271 ctaataatttgaaaaaatgacataatttagtgtaattacaagtgt 37203315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 179 - 267
Target Start/End: Complemental strand, 44081691 - 44081603
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataatt 267  Q
    |||||||||| |||||||||||| | | ||||||| ||  ||||||| ||||||||| |    ||||||||||||||||||| ||||||    
T  44081691 tatgaagcaccgatacggacacgaacatcggacacgacaaggacactgacacaccgatatcgttaataatttgaaaaaatcatataatt 44081603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 292
Target Start/End: Complemental strand, 5775418 - 5775359
Alignment:
Q  233 cgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    |||||| | ||||||||||| |||||||||||||| || ||||||| | |||||||||||    
T  5775418 cgacaccattaataatttgagaaaatcacataattaagtgtaattatatgtgtcggtgtc 5775359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 293
Target Start/End: Original strand, 13783265 - 13783340
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||||| ||||||||||||  ||||| |||||| || |||||| ||||||| ||||||| | ||| ||||||||    
T  13783265 cggacactgacacaccgacaccgctaattatttgagaagatcacaaaattcagtgtaattatatgtgccggtgtcg 13783340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 292
Target Start/End: Complemental strand, 28000794 - 28000743
Alignment:
Q  242 taataatttgaaaa-aatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    ||||||||| |||| ||||| ||||||||| |||||||||||||||||||||    
T  28000794 taataattttaaaataatcatataattcagtgtaattacaagtgtcggtgtc 28000743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 241 - 292
Target Start/End: Original strand, 47263993 - 47264044
Alignment:
Q  241 ctaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    ||||||||||| |||||||||||||||| | |||||||||| ||||| ||||    
T  47263993 ctaataatttgtaaaaatcacataattctgtgtaattacaaatgtcgatgtc 47264044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 229 - 278
Target Start/End: Complemental strand, 15724614 - 15724564
Alignment:
Q  229 acaccgacacaactaataatttgaa-aaaatcacataattcagcgtaatta 278  Q
    |||| |||||||||||||||||||| ||||||| |||||||||| ||||||    
T  15724614 acactgacacaactaataatttgaaaaaaatcatataattcagcataatta 15724564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 253 - 294
Target Start/End: Original strand, 4157455 - 4157496
Alignment:
Q  253 aaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    ||||||||||||||| || | |||||||||||||||||||||    
T  4157455 aaaaatcacataatttagtgcaattacaagtgtcggtgtcgg 4157496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 20521954 - 20521873
Alignment:
Q  188 cggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattca 269  Q
    |||||||| ||| ||| ||| ||||| || |||||||| |||| |||| ||   ||||||||||| ||||||||||||||||    
T  20521954 cggatacgtacatggacaccagacacgacacggacactgacacgccgataccgataataatttgataaaatcacataattca 20521873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 292
Target Start/End: Original strand, 33950081 - 33950194
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||||||||| |||| ||||||| ||| |||| ||| || ||||| ||||  | || |  |||||||||||| |||||||||||||| |  ||||| |    
T  33950081 tatgaagcacgggtacgaacacggacaccagacataacacgaacactgacacttcaacgccgctaataatttgagaaaatcacataatttaatgtaatca 33950180  T
Q  279 caagtgtcggtgtc 292  Q
     | |||||||||||    
T  33950181 tatgtgtcggtgtc 33950194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 227 - 288
Target Start/End: Original strand, 40613443 - 40613504
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcgg 288  Q
    |||| |||||||  |||||| ||||| ||||||||||||||||| ||||||| | |||||||    
T  40613443 acacgccgacaccgctaatattttgagaaaatcacataattcagtgtaattatatgtgtcgg 40613504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 1e-34; HSPs: 98)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 179 - 294
Target Start/End: Complemental strand, 42359563 - 42359448
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||||||||||||||| | |||| ||||||| |||||||| |||| | |||||| |||||||||||||||||||||| ||||||| |||||||    
T  42359563 tatgaagcacggatacggacacgaacaccgtacacaacacggacactgacacgctgacacatctaataatttgaaaaaatcacaaaattcagtgtaatta 42359464  T
Q  279 caagtgtcggtgtcgg 294  Q
    ||||||||||||||||    
T  42359463 caagtgtcggtgtcgg 42359448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 178 - 293
Target Start/End: Complemental strand, 1486824 - 1486709
Alignment:
Q  178 atatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatt 277  Q
    |||||||||| |||||||||||||||||||||| || || |||| ||| |||| | |||||| |||||||||||||||||||||||||||||| ||||||    
T  1486824 atatgaagcatggatacggacacggataccggatacgacacggatactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaatt 1486725  T
Q  278 acaagtgtcggtgtcg 293  Q
    | ||||||||||||||    
T  1486724 ataagtgtcggtgtcg 1486709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 179 - 293
Target Start/End: Original strand, 47989443 - 47989556
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||| |||||| |||||||||||| ||||| || | |||||| |||| ||||||||| ||||||||| ||||||||||||||||||| |||||||    
T  47989443 tatgaagcatggatacagacacggataccagacacgacacagacactgacacgccgacacaa-taataatttaaaaaaatcacataattcagtgtaatta 47989541  T
Q  279 caagtgtcggtgtcg 293  Q
    |||||||||||||||    
T  47989542 caagtgtcggtgtcg 47989556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 179 - 307
Target Start/End: Complemental strand, 398879 - 398756
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||||||||||||||||| |||| ||||||||| || |||||||| |||| |||||||  |||||||||||||||||||||||||||||| |||||||    
T  398879 tatgaagcacggatacggacgcggacaccggacacgacacggacactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaatta 398780  T
Q  279 caagtgtcggtgtcgggacacgcctaatc 307  Q
     | |||||     ||||||||||||||||    
T  398779 taggtgtc-----cgggacacgcctaatc 398756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 179 - 294
Target Start/End: Complemental strand, 22881724 - 22881615
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||||||||||||  |||||||| |||||||||      |||||| |||| |||||||||||||||||||||||||||||||||||| || |||||||    
T  22881724 tatgaagcacggatatagacacggacaccggacac------gacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaatta 22881631  T
Q  279 caagtgtcggtgtcgg 294  Q
    ||||||||||||||||    
T  22881630 caagtgtcggtgtcgg 22881615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 219 - 310
Target Start/End: Complemental strand, 31672969 - 31672879
Alignment:
Q  219 ggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgggacacgcctaatccga 310  Q
    ||||||| ||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||| |||||||| |||||||||||||||||    
T  31672969 ggacactgacacaccgacacagctaataatttgaaaaaatcacttaattcagtgtaattacaagtctcggtgtc-ggacacgcctaatccga 31672879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 179 - 294
Target Start/End: Complemental strand, 38078770 - 38078660
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||||||||||||||||| ||||||||| |     ||||| ||||  ||||||| |||||||||||||||||||||||||||||  |||||||    
T  38078770 tatgaagcacggatacggacacggacaccggacacga-----acactgacacgtcgacacagctaataatttgaaaaaatcacataattcaatgtaatta 38078676  T
Q  279 caagtgtcggtgtcgg 294  Q
    ||||||||||||||||    
T  38078675 caagtgtcggtgtcgg 38078660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 179 - 293
Target Start/End: Complemental strand, 6612285 - 6612171
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||||||| |||||||||||| | ||||||||| || |||||| | |||| |||| |||  ||||||||||||||||| ||||||||||| |||||||    
T  6612285 tatgaagcacagatacggacacgaacaccggacacgacacggacaatgacacgccgatacagttaataatttgaaaaaattacataattcagtgtaatta 6612186  T
Q  279 caagtgtcggtgtcg 293  Q
    |||||||||||||||    
T  6612185 caagtgtcggtgtcg 6612171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 218 - 293
Target Start/End: Complemental strand, 1705067 - 1704992
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||||  ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  1705067 cggacaccgacacaccgacacatctaataatttgaaaaaatcacataattcagggtaattacaagtgtcggtgtcg 1704992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 177 - 294
Target Start/End: Original strand, 9103583 - 9103699
Alignment:
Q  177 catatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaat 276  Q
    ||||||||||||||||| ||||||| | ||| ||||  ||||||||||| |||| ||||||||  |||||||||||||||||||||||||| ||  |||     
T  9103583 catatgaagcacggatatggacacgaacacctgacaggactcggacactgacacgccgacacagttaataatttgaaaaaatcacataatttagtttaa- 9103681  T
Q  277 tacaagtgtcggtgtcgg 294  Q
    ||||||||||||||||||    
T  9103682 tacaagtgtcggtgtcgg 9103699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 179 - 292
Target Start/End: Original strand, 38503265 - 38503378
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||| ||||||||||||||||||| || |||||  || |||||||||||||||||||||  |||||||||||| ||||||| ||| ||||| |||||||    
T  38503265 tatgatgcacggatacggacacggacacgggacatgacacggacactaacacaccgacaccgctaataatttgagaaaatcatatatttcagtgtaatta 38503364  T
Q  279 caagtgtcggtgtc 292  Q
     | |||||||||||    
T  38503365 tatgtgtcggtgtc 38503378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 234 - 293
Target Start/End: Complemental strand, 24577245 - 24577186
Alignment:
Q  234 gacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  24577245 gacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 24577186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 229 - 292
Target Start/End: Complemental strand, 40258997 - 40258934
Alignment:
Q  229 acaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  40258997 acaccgacacaattaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 40258934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 179 - 294
Target Start/End: Complemental strand, 41877584 - 41877469
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||||||||||||| ||||||| ||||| || | ||||||   || |||||||  |||||||||||| ||||| |||||||| || |||||||    
T  41877584 tatgaagcacggatacggacatggataccagacacgacacagacactggtacgccgacaccgctaataatttgagaaaattacataatttagtgtaatta 41877485  T
Q  279 caagtgtcggtgtcgg 294  Q
    ||||||||||||||||    
T  41877484 caagtgtcggtgtcgg 41877469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 218 - 294
Target Start/End: Original strand, 37598816 - 37598891
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||    
T  37598816 cggacactgacacgccgacacaactaataatttgaaaaaatcaca-aattcagtgtaattataagtgtcggtgtcgg 37598891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 218 - 294
Target Start/End: Complemental strand, 46348458 - 46348382
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||||| |||| |||||||| |||||||||||||||||||| |||||| || |||||||||||||||||||||||    
T  46348458 cggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtcgg 46348382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 227 - 293
Target Start/End: Original strand, 113292 - 113358
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  113292 acacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcg 113358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 218 - 292
Target Start/End: Original strand, 1815241 - 1815315
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    |||||||| |||| ||||||||| |||| |||| ||||||||||||||||||| |||||||||||||||||||||    
T  1815241 cggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 1815315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 207 - 317
Target Start/End: Complemental strand, 48450673 - 48450563
Alignment:
Q  207 cggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgggacacgcctaat 306  Q
    ||||||| || |||||||| |||| || ||||| |||||||||||||||||| |||||||| || |||||||||||||||||   | ||||||| |||||    
T  48450673 cggacacgacacggacactgacacgccaacacagctaataatttgaaaaaataacataatttagtgtaattacaagtgtcggacacaggacacgtctaat 48450574  T
Q  307 ccgaagagtgt 317  Q
    |||| ||||||    
T  48450573 ccgaggagtgt 48450563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 227 - 291
Target Start/End: Original strand, 21378571 - 21378635
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgt 291  Q
    ||||||||||||| ||||||| |||||||||| ||||||||||| ||||||||||||||||||||    
T  21378571 acacaccgacacagctaataaattgaaaaaattacataattcagtgtaattacaagtgtcggtgt 21378635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 22515946 - 22515886
Alignment:
Q  234 gacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  22515946 gacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgg 22515886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 179 - 270
Target Start/End: Complemental strand, 2896235 - 2896144
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcag 270  Q
    ||||||| |||||||| | |||||| | |||||||||| |||||||| |||| |||||||  |||||||||||| |||||||||||||||||    
T  2896235 tatgaagaacggatacagtcacggacaacggacacaacacggacactgacacgccgacaccgctaataatttgagaaaatcacataattcag 2896144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 206 - 293
Target Start/End: Complemental strand, 5376587 - 5376500
Alignment:
Q  206 ccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||||| || ||||||||||||| |||||||  |||||||||| | ||||| ||||||||||| ||||||| ||||||||||||||    
T  5376587 ccggacacgacacggacactaacacgccgacaccgctaataatttaagaaaataacataattcagtgtaattaaaagtgtcggtgtcg 5376500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 18337338 - 18337389
Alignment:
Q  243 aataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18337338 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgg 18337389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 179 - 278
Target Start/End: Original strand, 34298381 - 34298480
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||| ||| ||||| |||||| | ||| ||||| || |||| ||| |||||||||||| ||||||||||||| ||||||||||||||||| |||||||    
T  34298381 tatgaaacaccgatacagacacgtacaccagacacgacacggaaactgacacaccgacaccactaataatttgagaaaatcacataattcagtgtaatta 34298480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 232 - 294
Target Start/End: Original strand, 51410022 - 51410085
Alignment:
Q  232 ccgacacaactaataatttgaaaa-aatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  51410022 ccgacacatctaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgg 51410085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 28273147 - 28273089
Alignment:
Q  234 gacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    |||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||    
T  28273147 gacacaactaatcatttgaaaaaatcatataattcagtgtaattacaagtgtcggtgtc 28273089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 179 - 293
Target Start/End: Complemental strand, 31694824 - 31694710
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaa--tcacataattcagcgtaat 276  Q
    ||||||||||||||||||| ||||| ||||||||| ||   |||||| | ||  ||||| | |||||||||||||||||  |||||||||||||  ||||    
T  31694824 tatgaagcacggatacggatacggacaccggacacgaca--gacactgatacgtcgacatagctaataatttgaaaaaaaatcacataattcagtataat 31694727  T
Q  277 tacaagtgtcggtgtcg 293  Q
    |||||||||||||||||    
T  31694726 tacaagtgtcggtgtcg 31694710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 218 - 291
Target Start/End: Complemental strand, 32434792 - 32434718
Alignment:
Q  218 cggacactaacac-accgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgt 291  Q
    |||||||| |||| |||||||||||||||||||||||||| ||||||||||||  ||||||||||||||| ||||    
T  32434792 cggacactgacaccaccgacacaactaataatttgaaaaagtcacataattcattgtaattacaagtgtctgtgt 32434718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 179 - 288
Target Start/End: Complemental strand, 10577849 - 10577740
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||||||||||||||||| ||||||||| || |||||||  |||| |||||||| |||||  ||| | ||||||||| ||| ||| |||||||    
T  10577849 tatgaagcacggatacggacacggacaccggacacgacacggacaccgacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaatta 10577750  T
Q  279 caagtgtcgg 288  Q
     | |||||||    
T  10577749 tatgtgtcgg 10577740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 179 - 289
Target Start/End: Original strand, 18471243 - 18471355
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttg--aaaaaatcacataattcagcgtaat 276  Q
    |||||||||| |||| ||||||||||| |||| || || |||||| | || |  ||||||| |||||||||||  |||||||||||||||||||  ||||    
T  18471243 tatgaagcacagatatggacacggatatcggatacgacacggacaatgacccgtcgacacagctaataatttgaaaaaaaatcacataattcagtataat 18471342  T
Q  277 tacaagtgtcggt 289  Q
    |||||||||||||    
T  18471343 tacaagtgtcggt 18471355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 197 - 293
Target Start/End: Original strand, 40917714 - 40917808
Alignment:
Q  197 acacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||||| ||||||||| || |||| ||| |||| |||||||| |||||||||||||||||||||  |||| || |||||||||||| |||||||||    
T  40917714 acacggacaccggacacgacacggatactgacacgccgacacagctaataatttgaaaaaatcac--aattaagtgtaattacaagtctcggtgtcg 40917808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 229 - 293
Target Start/End: Original strand, 6332666 - 6332729
Alignment:
Q  229 acaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||| |||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||    
T  6332666 acacggacacaactaataatttgaaaa-atcacataattcagtgtaattacaagtatcggtgtcg 6332729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 187 - 291
Target Start/End: Complemental strand, 10572695 - 10572591
Alignment:
Q  187 acggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtc 286  Q
    ||||| ||||| ||||| ||||||||| ||  | ||||| |||| ||||||| ||||||||||||| ||||||||||||||| | ||||||| | |||||    
T  10572695 acggacacggatacggacaccggacacgacatgaacactgacacgccgacaccactaataatttgagaaaatcacataattcggtgtaattaaatgtgtc 10572596  T
Q  287 ggtgt 291  Q
    |||||    
T  10572595 ggtgt 10572591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 179 - 292
Target Start/End: Complemental strand, 18190214 - 18190109
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||| ||||||||||| ||| ||||||||| || |||| ||| |||||||        ||||||||||||||||| ||||||||||| |||||||    
T  18190214 tatgaagcatggatacggacatggacaccggacacgacacggatactgacacacc--------taataatttgaaaaaattacataattcagtgtaatta 18190123  T
Q  279 caagtgtcggtgtc 292  Q
    ||||||||| ||||    
T  18190122 caagtgtcgatgtc 18190109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 13011330 - 13011223
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaa-aaaatcacataattcagcgtaatt 277  Q
    ||||||| || ||||| |||||||| |||| |||| || || ||||| |||  |||||||| ||||||||||||| |||||||||||||| || ||||||    
T  13011330 tatgaagaacagatacagacacggacaccgaacacgacacgaacactgacatgccgacacagctaataatttgaaaaaaatcacataattaagtgtaatt 13011231  T
Q  278 acaagtgt 285  Q
    ||||||||    
T  13011230 acaagtgt 13011223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 178 - 281
Target Start/End: Complemental strand, 16297398 - 16297295
Alignment:
Q  178 atatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatt 277  Q
    |||||||||||||||||||||| ||| | ||||||| |  |||| ||| ||||  ||||||| | |||||| ||||||||||||| ||||||| ||||||    
T  16297398 atatgaagcacggatacggacatggacatcggacacgatacggatactgacacgtcgacacagcaaataatatgaaaaaatcacaaaattcagtgtaatt 16297299  T
Q  278 acaa 281  Q
    ||||    
T  16297298 acaa 16297295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 227 - 294
Target Start/End: Complemental strand, 19058922 - 19058855
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||| |||||||| |||||||||| |||| || ||||||||||| |||||||||||||||||||||||    
T  19058922 acacgccgacacagctaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtcgg 19058855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 193 - 288
Target Start/End: Original strand, 31015002 - 31015097
Alignment:
Q  193 acggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcgg 288  Q
    |||||||| || ||||| ||| || ||| |||| || | || ||||| |||||||||||| ||||||||||||||||| |||||||||||||||||    
T  31015002 acggacacagacaccgggcacgacacgggcactgacgcgcctacacagctaataatttgagaaaatcacataattcagtgtaattacaagtgtcgg 31015097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 179 - 293
Target Start/End: Complemental strand, 7918325 - 7918211
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||||||||| ||| |||| ||| ||||||||| || | |||| | |||| | ||||  ||||||||||||| ||||||||||||||||| |||||||    
T  7918325 tatgaagcacggttacagacatggacaccggacacgacacagacaatgacacgctgacatcactaataatttgagaaaatcacataattcagtgtaatta 7918226  T
Q  279 caagtgtcggtgtcg 293  Q
     | ||||| ||||||    
T  7918225 tatgtgtcagtgtcg 7918211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 193 - 294
Target Start/End: Complemental strand, 5927440 - 5927339
Alignment:
Q  193 acggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    ||||| ||||| ||||||||| || |||||||| |||| |  ||||  |||||||||||||||||||| |||||| |  ||||||||||||||| |||||    
T  5927440 acggatacggacaccggacacgacacggacactgacacgctaacactgctaataatttgaaaaaatcatataatttaatgtaattacaagtgtcagtgtc 5927341  T
Q  293 gg 294  Q
    ||    
T  5927340 gg 5927339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 207 - 293
Target Start/End: Original strand, 5944254 - 5944342
Alignment:
Q  207 cggacacaactcggacactaacacaccgacacaactaataatttgaaaa--aatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||||| || | |||||| |||| ||| |||| |||||||||||||||  ||||||||||||||| ||||||| ||||||||||||||    
T  5944254 cggacacgacacagacactgacacgccgccacagctaataatttgaaaaaaaatcacataattcagtgtaattataagtgtcggtgtcg 5944342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 220 - 317
Target Start/End: Original strand, 30359374 - 30359471
Alignment:
Q  220 gacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgggacacgcctaatccgaagagtgt 317  Q
    |||||| |||||||| ||||||| |||||||||||||||||||||||| || |||| | |||||||||    ||||||||||| |||| || ||||||    
T  30359374 gacactgacacaccggcacaactgataatttgaaaaaatcacataatttagtgtaactgcaagtgtcgacaacgggacacgccaaatctgaggagtgt 30359471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 227 - 291
Target Start/End: Complemental strand, 32461529 - 32461465
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgt 291  Q
    |||| ||| |||||||||||||||||||||||||||||||| |  |||||||||||||| |||||    
T  32461529 acacgccggcacaactaataatttgaaaaaatcacataatttaatgtaattacaagtgttggtgt 32461465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 220 - 292
Target Start/End: Original strand, 36878447 - 36878519
Alignment:
Q  220 gacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    |||||| |||| |||||||  |||||||||||| ||||||||||||||||| ||||||| | |||||||||||    
T  36878447 gacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtc 36878519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 181 - 308
Target Start/End: Original strand, 9709767 - 9709893
Alignment:
Q  181 tgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattaca 280  Q
    |||||||||||||| |||| ||| | | ||||| || |||||||| |||  || ||||  |||||||||||| |||||||||||||||   ||||||| |    
T  9709767 tgaagcacggatacagacatggacatcagacacgacacggacactgacatgcctacaccgctaataatttgagaaaatcacataattcgttgtaattata 9709866  T
Q  281 agtgtcggtgtcgggacacgcctaatcc 308  Q
     ||||||||||| |||||||| ||||||    
T  9709867 tgtgtcggtgtc-ggacacgcttaatcc 9709893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 218 - 293
Target Start/End: Complemental strand, 18556531 - 18556456
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||||| |||| |||||||| ||||||||||||||| ||||||||||| |  |||||||||||| | |||||||    
T  18556531 cggacactgacacgccgacacagctaataatttgaaaatatcacataatttaatgtaattacaagtattggtgtcg 18556456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 179 - 332
Target Start/End: Complemental strand, 29144471 - 29144316
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacaca-actcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatt 277  Q
    ||||||||| |||||||||||| |||||  |||||  || | |||||| | || |||||||| |||||||||||||||||  | ||||| ||| ||||||    
T  29144471 tatgaagcatggatacggacacagatac--gacacggacactgacactgatacgccgacacagctaataatttgaaaaaaatagataatgcagtgtaatt 29144374  T
Q  278 acaagtgt-cggtgtcgggacacgcctaatccgaagagtgt--gtgctccataggtca 332  Q
    |||||||| ||    ||| ||||||||||||||||||||||  ||||| |||||||||    
T  29144373 acaagtgtccgacaccggaacacgcctaatccgaagagtgtccgtgcttcataggtca 29144316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 187 - 289
Target Start/End: Complemental strand, 48040568 - 48040465
Alignment:
Q  187 acggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaa-atcacataattcagcgtaattacaagtgt 285  Q
    ||||||| ||| ||||| ||||||||| || |||||||| |||| ||||||||  |||||||||||||||  ||||||| || || |||| |||||||||    
T  48040568 acggatatggatacggacaccggacacgacacggacactgacacgccgacacagataataatttgaaaaaggtcacatattttagtgtaaatacaagtgt 48040469  T
Q  286 cggt 289  Q
    ||||    
T  48040468 cggt 48040465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 199 - 269
Target Start/End: Original strand, 1262849 - 1262919
Alignment:
Q  199 acggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattca 269  Q
    ||||||||||||||| || || ||||  |||| |||||||| |||||||||||| ||||||||||||||||    
T  1262849 acggataccggacacgacacgaacacggacacgccgacacagctaataatttgagaaaatcacataattca 1262919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 229 - 291
Target Start/End: Complemental strand, 1864944 - 1864882
Alignment:
Q  229 acaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgt 291  Q
    |||||||||||  ||||||||||| ||||||||||||||||| ||||||| | ||||||||||    
T  1864944 acaccgacacagttaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgt 1864882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 227 - 293
Target Start/End: Original strand, 9828037 - 9828103
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||| ||||||| ||||||||||||| ||||||||||||||||| ||||||  | ||||||||||||    
T  9828037 acacgccgacaccactaataatttgataaaatcacataattcagtgtaattttatgtgtcggtgtcg 9828103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 179 - 287
Target Start/End: Complemental strand, 3490498 - 3490396
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||||||||||| || || |||||||||      |||||| |||| |||||||  |||||||||||| ||||  |||| |||||| |||||||    
T  3490498 tatgaagcacggatacggatacagacaccggacac------gacactgacacgccgacactgctaataatttgagaaaactacattattcagtgtaatta 3490405  T
Q  279 caagtgtcg 287  Q
    |||||||||    
T  3490404 caagtgtcg 3490396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 179 - 292
Target Start/End: Complemental strand, 6415110 - 6415002
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||||||||||||||| | |||||||||     ||||||| |||| ||||||   ||||| |||||| ||||||||||||| |||  ||||||    
T  6415110 tatgaagcacggatacggacacgaacaccggacac-----ggacactgacacgccgacatcgctaattatttgagaaaatcacataatacagtttaatta 6415016  T
Q  279 caagtgtcggtgtc 292  Q
     | |||||||||||    
T  6415015 gatgtgtcggtgtc 6415002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 234 - 293
Target Start/End: Original strand, 17778549 - 17778605
Alignment:
Q  234 gacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||| ||||||||||||||||||||||||   ||| ||||||||||||||||||||||    
T  17778549 gacacagctaataatttgaaaaaatcacata---cagtgtaattacaagtgtcggtgtcg 17778605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 218 - 294
Target Start/End: Complemental strand, 24334781 - 24334704
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatca-cataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||||  ||||||||||||| ||||| |||||||||||    |||||||||| |||||||||||||||||||||||    
T  24334781 cggacacggacacaccgacacagctaatcatttgaaaaaaaatgcataattcagtgtaattacaagtgtcggtgtcgg 24334704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 286
Target Start/End: Complemental strand, 14359615 - 14359529
Alignment:
Q  198 cacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtc 286  Q
    ||||||||| |||||| || | |||||  |||| |||||||| |||||||||||||||| |||||||||| || |||||||||||||||    
T  14359615 cacggatac-ggacacgacacagacacggacacgccgacacagctaataatttgaaaaa-tcacataatttagtgtaattacaagtgtc 14359529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 270
Target Start/End: Original strand, 16812527 - 16812579
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcag 270  Q
    |||||||| |||||||||||| | ||||||||||| |||||||||||||||||    
T  16812527 cggacactgacacaccgacaccaataataatttgacaaaatcacataattcag 16812579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 293
Target Start/End: Complemental strand, 20157438 - 20157350
Alignment:
Q  205 accggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||||||| || ||| |||| ||||| ||||||  |||||||| ||| ||||||||||||||||| ||||| | | ||||||||||||    
T  20157438 accggacacgacacgggcactgacacatcgacaccgctaataatgtgagaaaatcacataattcagtgtaatcatatgtgtcggtgtcg 20157350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 231 - 291
Target Start/End: Original strand, 23738675 - 23738735
Alignment:
Q  231 accgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgt 291  Q
    ||||||||| |||||||||||||||||||||||||||||| | ||||| | |||| |||||    
T  23738675 accgacacagctaataatttgaaaaaatcacataattcagtgcaattaaatgtgttggtgt 23738735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 293
Target Start/End: Complemental strand, 35919356 - 35919276
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaa-----aaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||||| ||||| |||||||| |||||||||||||     ||||||||||||||||| ||||||| ||||||| ||||||    
T  35919356 cggacaccaacactccgacacatctaataatttgaagaaaaaaaatcacataattcagtgtaattataagtgtccgtgtcg 35919276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 48548076 - 48548016
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacaca 239  Q
    ||||||||||||||||||||||||| |||||||||||  |||||| | |||| ||||||||    
T  48548076 tatgaagcacggatacggacacggacaccggacacaatacggacaatgacacgccgacaca 48548016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 221 - 292
Target Start/End: Complemental strand, 27471638 - 27471567
Alignment:
Q  221 acactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    ||||| ||||||||| ||  |||||||||||| |||| |||||||||||| ||||||||| |||| ||||||    
T  27471638 acactgacacaccgataccgctaataatttgagaaaagcacataattcagtgtaattacatgtgttggtgtc 27471567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 269
Target Start/End: Complemental strand, 609572 - 609482
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattca 269  Q
    ||||||||||| |||||||||| || | ||||||| ||    ||||| |||| ||||||| ||||||||||||| ||||| ||||||||||    
T  609572 tatgaagcacgtatacggacacagacatcggacacgacatcaacactgacacgccgacaccactaataatttgagaaaattacataattca 609482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 232 - 293
Target Start/End: Original strand, 6427459 - 6427523
Alignment:
Q  232 ccgacacaactaataatttg---aaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||||||||||||||||||   ||||||||||||||||||  |||| |||||||||| ||||||    
T  6427459 ccgacacaactaataatttgaaaaaaaaatcacataattcaatgtaactacaagtgtcagtgtcg 6427523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 227 - 293
Target Start/End: Complemental strand, 9629966 - 9629900
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||| ||||||  |||||||||||| ||||||| ||||||||| || |||| ||||||||||||||    
T  9629966 acacatcgacaccgctaataatttgataaaatcatataattcagtgtgattataagtgtcggtgtcg 9629900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 227 - 277
Target Start/End: Complemental strand, 12443526 - 12443476
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatt 277  Q
    |||| |||||||| |||||||||||| ||||||||||||||||| ||||||    
T  12443526 acacgccgacacagctaataatttgagaaaatcacataattcagtgtaatt 12443476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 220 - 278
Target Start/End: Original strand, 23622304 - 23622362
Alignment:
Q  220 gacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||| ||||||| ||||||| ||| |||||||||||||| |||| |||||||    
T  23622304 gacactaacacgccgacaccactaatagtttaaaaaaatcacataactcagtgtaatta 23622362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 232 - 294
Target Start/End: Complemental strand, 35702649 - 35702587
Alignment:
Q  232 ccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||||| |||||||||||||||  ||| |||||| || ||||||||||||||| |||||||    
T  35702649 ccgacacagctaataatttgaaaacttcaaataattaagtgtaattacaagtgtcagtgtcgg 35702587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 275
Target Start/End: Original strand, 23652991 - 23653040
Alignment:
Q  226 aacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaa 275  Q
    |||||||||||| | |||||||||||||||||||||||| ||||| ||||    
T  23652991 aacacaccgacaaagctaataatttgaaaaaatcacatacttcagtgtaa 23653040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 232 - 293
Target Start/End: Original strand, 25361884 - 25361945
Alignment:
Q  232 ccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||||| ||| ||||||||| ||||||||||||||||| ||||||| | ||||| ||||||    
T  25361884 ccgacaccactgataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcg 25361945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 241 - 294
Target Start/End: Original strand, 40181878 - 40181931
Alignment:
Q  241 ctaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||||||||| ||||||||||||||||| ||||||| | || ||||||||||    
T  40181878 ctaataatttgagaaaatcacataattcagtgtaattatatgtatcggtgtcgg 40181931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 44482240 - 44482289
Alignment:
Q  244 ataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||||||| ||||||||||||||||| ||||||| | ||||||||||||    
T  44482240 ataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 44482289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 2283669 - 2283725
Alignment:
Q  237 acaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||| |||||||||||||||||||| |||||  ||||||| |||||| |||||||    
T  2283669 acaacttataatttgaaaaaatcacatgattcaatgtaattataagtgttggtgtcg 2283725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 232 - 292
Target Start/End: Complemental strand, 5898327 - 5898267
Alignment:
Q  232 ccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    |||||||  |||||||| ||||||||||||||||||||| ||||||| | | |||||||||    
T  5898327 ccgacaccgctaataatctgaaaaaatcacataattcagtgtaattatatgcgtcggtgtc 5898267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 227 - 291
Target Start/End: Original strand, 10233246 - 10233310
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgt 291  Q
    ||||||| |||| |||||||| |||| ||||||||||||||||| ||||||| | ||||| ||||    
T  10233246 acacaccaacaccactaataaattgagaaaatcacataattcagtgtaattatatgtgtctgtgt 10233310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 227 - 275
Target Start/End: Original strand, 17754304 - 17754352
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaa 275  Q
    ||||||||||||  |||||||||||||||||| ||||||||||| ||||    
T  17754304 acacaccgacaccgctaataatttgaaaaaattacataattcagtgtaa 17754352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 218 - 294
Target Start/End: Original strand, 52903233 - 52903309
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    ||||||||||||| |||| ||   ||||||||| | ||||||| ||||||||| ||||||| | |||||||||||||    
T  52903233 cggacactaacacgccgataccgttaataatttaataaaatcatataattcagtgtaattatatgtgtcggtgtcgg 52903309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 294
Target Start/End: Complemental strand, 2288240 - 2288168
Alignment:
Q  220 gacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    ||||||||||||||||||  | ||||||||| | ||||||||||||||||  ||||||  | |||||||||||||    
T  2288240 gacactaacacaccgacaacaataataatttaagaaaatcacataattcaatgtaatt--atgtgtcggtgtcgg 2288168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 293
Target Start/End: Original strand, 6427334 - 6427409
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||||| |||| || ||||  |||||||||||| ||||||||||||||||  ||||||| | |||| |||||||    
T  6427334 cggacactgacacgccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgttggtgtcg 6427409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 270
Target Start/End: Complemental strand, 9449074 - 9449031
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcag 270  Q
    ||||||| |||| | |||||||||||||||||||||||||||||    
T  9449074 acacaccaacaccattaataatttgaaaaaatcacataattcag 9449031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 291
Target Start/End: Original strand, 13997869 - 13997940
Alignment:
Q  220 gacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgt 291  Q
    |||||| |||| |||||||   |||| |||| ||||||||||||||||||| ||||||| | ||||||||||    
T  13997869 gacactgacacgccgacaccgttaattatttaaaaaaatcacataattcagtgtaattatatgtgtcggtgt 13997940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 294
Target Start/End: Complemental strand, 14332700 - 14332641
Alignment:
Q  235 acacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||| ||||||||||||| |||||||||||||| || ||||||| | || ||||||||||    
T  14332700 acaccactaataatttgagaaaatcacataatttagtgtaattatatgtctcggtgtcgg 14332641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 286
Target Start/End: Original strand, 15323124 - 15323215
Alignment:
Q  195 ggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtc 286  Q
    ||||||||| ||||||||| ||  ||||||| |||   ||| |||  |||||||||||||||||||||||||| || ||||||  |||||||    
T  15323124 ggacacggacaccggacacgacatggacactgacatgtcgatacagttaataatttgaaaaaatcacataatttagtgtaattgtaagtgtc 15323215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 270
Target Start/End: Complemental strand, 21366134 - 21366043
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcag 270  Q
    ||||||||||| ||||||||| | | |||| |||| || || ||||  |||| ||| |||| |||||||||| ||||||| |||||||||||    
T  21366134 tatgaagcacgcatacggacatgaacaccgaacacgacacgaacaccgacacgccggcacagctaataattttaaaaaataacataattcag 21366043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 246 - 293
Target Start/End: Original strand, 25272494 - 25272541
Alignment:
Q  246 aatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||||| |||||||||||||| || ||||||| ||||||||||||||    
T  25272494 aatttgagaaaatcacataatttagtgtaattataagtgtcggtgtcg 25272541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 265
Target Start/End: Complemental strand, 28268239 - 28268192
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataa 265  Q
    |||||||||||||| |||||| ||||| ||||||| ||||||||||||    
T  28268239 cggacactaacacatcgacaccactaaaaatttgagaaaatcacataa 28268192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 293
Target Start/End: Complemental strand, 34712458 - 34712383
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||| |||||||||| |||  |||||||||||| ||||| |||||||| || ||||||| | ||||| ||||||    
T  34712458 cggacattaacacaccgtcactgctaataatttgagaaaataacataatttagtgtaattatatgtgtcagtgtcg 34712383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 36905982 - 36906041
Alignment:
Q  219 ggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||| ||||||| ||||  |||||||| ||| ||||||||||||||||| |||||||    
T  36905982 ggacactgacacaccaacaccgctaataatctgagaaaatcacataattcagagtaatta 36906041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 270
Target Start/End: Complemental strand, 40285768 - 40285677
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcag 270  Q
    ||||||||||||||||| ||| ||| ||| | ||| |   ||||||| ||||||| ||||  |||||||||||| |||||| ||||||||||    
T  40285768 tatgaagcacggatacgaacatggaaaccaggcacgagatggacactgacacaccaacaccgctaataatttgagaaaatcgcataattcag 40285677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 220 - 294
Target Start/End: Original strand, 13436444 - 13436518
Alignment:
Q  220 gacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    ||||| ||||| |||||||  |||||||||| |  |||||||||||||||| ||||||| | |||| ||||||||    
T  13436444 gacacgaacacgccgacactgctaataatttaaggaaatcacataattcagtgtaattatatgtgttggtgtcgg 13436518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 21620973 - 21621015
Alignment:
Q  252 aaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    ||||||||||||||||||| ||| ||||||| |||||||||||    
T  21620973 aaaaaatcacataattcagtgtatttacaagcgtcggtgtcgg 21621015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 218 - 278
Target Start/End: Complemental strand, 9033083 - 9033022
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaa-tcacataattcagcgtaatta 278  Q
    |||||||| ||||  | |||| |||||||||||||||||| ||||||||||||| |||||||    
T  9033083 cggacactgacacgtcaacaccactaataatttgaaaaaaatcacataattcagtgtaatta 9033022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 241 - 278
Target Start/End: Complemental strand, 16927237 - 16927200
Alignment:
Q  241 ctaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||||||||||||||||| ||||||||| |||||||    
T  16927237 ctaataatttgaaaaaatcatataattcagtgtaatta 16927200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 275
Target Start/End: Original strand, 23621963 - 23622012
Alignment:
Q  226 aacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaa 275  Q
    |||||||||||||| |||||||||||||||||| | ||| ||||| ||||    
T  23621963 aacacaccgacacagctaataatttgaaaaaattatatacttcagtgtaa 23622012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 212
Target Start/End: Original strand, 25934573 - 25934606
Alignment:
Q  179 tatgaagcacggatacggacacggataccggaca 212  Q
    ||||||||||||||||||||||||| ||||||||    
T  25934573 tatgaagcacggatacggacacggacaccggaca 25934606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 252 - 293
Target Start/End: Original strand, 28663626 - 28663667
Alignment:
Q  252 aaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||||||||||||||   ||||||||||||||||||||||    
T  28663626 aaaaaatcacataattctatgtaattacaagtgtcggtgtcg 28663667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 252 - 293
Target Start/End: Complemental strand, 30173803 - 30173762
Alignment:
Q  252 aaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||||| |||||| |||| ||||||||||||||||||||||    
T  30173803 aaaaaattacataactcagtgtaattacaagtgtcggtgtcg 30173762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 4e-34; HSPs: 65)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 183 - 293
Target Start/End: Complemental strand, 13287509 - 13287399
Alignment:
Q  183 aagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaag 282  Q
    ||||||||||||||||||||| ||||||||| || |||||||||||||  |||||||  ||||||||||||||||||||||||||||| |||| ||||||    
T  13287509 aagcacggatacggacacggacaccggacacgacacggacactaacacgtcgacacagataataatttgaaaaaatcacataattcagtgtaactacaag 13287410  T
Q  283 tgtcggtgtcg 293  Q
    |||||||||||    
T  13287409 tgtcggtgtcg 13287399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 179 - 293
Target Start/End: Original strand, 21522695 - 21522809
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||||||||||||||||  ||||||||| || |||||||| |||| |||||||| |||||||||| ||||||| ||||||||||| |||||||    
T  21522695 tatgaagcacggatacggacacggtcaccggacacgacacggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaatta 21522794  T
Q  279 caagtgtcggtgtcg 293  Q
    ||| |||||||||||    
T  21522795 caattgtcggtgtcg 21522809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 179 - 293
Target Start/End: Original strand, 21533261 - 21533375
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||||||||||||||||  ||||||||| || |||||||| |||| |||||||| |||||||||| ||||||| ||||||||||| |||||||    
T  21533261 tatgaagcacggatacggacacggtcaccggacacgacacggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaatta 21533360  T
Q  279 caagtgtcggtgtcg 293  Q
    ||| |||||||||||    
T  21533361 caattgtcggtgtcg 21533375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 191 - 294
Target Start/End: Complemental strand, 21191158 - 21191055
Alignment:
Q  191 atacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtg 290  Q
    |||||||||| || ||||||||| || |||||||| |||  |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  21191158 atacggacactgacaccggacacgacacggacactgacatgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 21191059  T
Q  291 tcgg 294  Q
    ||||    
T  21191058 tcgg 21191055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 179 - 294
Target Start/End: Original strand, 15382422 - 15382539
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttg--aaaaaatcacataattcagcgtaat 276  Q
    ||||||||||||||||||||||||| ||||||||| || |||||| | |||| |||||||| |||||||||||  ||||||||| |||||||||  ||||    
T  15382422 tatgaagcacggatacggacacggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaaaatcatataattcagtataat 15382521  T
Q  277 tacaagtgtcggtgtcgg 294  Q
    ||||||||||||||||||    
T  15382522 tacaagtgtcggtgtcgg 15382539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 218 - 317
Target Start/End: Original strand, 10298553 - 10298656
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg----ggacacgcctaatccgaaga 313  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||| ||  ||||||||||||||||||||||    ||||||||||||||||| ||    
T  10298553 cggacactaacacgccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcggtgtcgtatcggacacgcctaatccgagga 10298652  T
Q  314 gtgt 317  Q
    ||||    
T  10298653 gtgt 10298656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 179 - 293
Target Start/End: Original strand, 19579646 - 19579760
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||||||||| |||| || |||||| ||||| |||||||| | || |||||||| |||||||||||| |||||||||||||| || | |||||    
T  19579646 tatgaagcacggatacgtacaccgacaccggatacaacacggacactgatacgccgacacagctaataatttgagaaaatcacataatttagtgcaatta 19579745  T
Q  279 caagtgtcggtgtcg 293  Q
    |||||||||||||||    
T  19579746 caagtgtcggtgtcg 19579760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 200 - 294
Target Start/End: Original strand, 6247588 - 6247682
Alignment:
Q  200 cggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||| ||||||||| |  || ||||| |||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  6247588 cggacaccggacacgatacgcacactgacacgccgacacatctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgg 6247682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 219 - 292
Target Start/End: Complemental strand, 21351979 - 21351906
Alignment:
Q  219 ggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    ||||||| ||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||    
T  21351979 ggacactgacacaccgacacaactaataattggaaaaagtcacataattcagtgtaattacaagtgtcggtgtc 21351906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 179 - 291
Target Start/End: Complemental strand, 17177137 - 17177025
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||||||||||||||||||| || ||| || || ||||||||||| | || || ||||| |||||||||||||||||||| | ||||||  |||||||    
T  17177137 tatgaagcacggatacggacacagacaccagatacgactcggacactgatacgccaacacagctaataatttgaaaaaatcaaaaaattcattgtaatta 17177038  T
Q  279 caagtgtcggtgt 291  Q
    |||||||||||||    
T  17177037 caagtgtcggtgt 17177025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 179 - 286
Target Start/End: Complemental strand, 6326411 - 6326304
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||| ||||| ||||||||||||||||||| || |||||||| |||| ||||||   ||| |||||||| ||||| ||||||||||| |||||||    
T  6326411 tatgaagcatggataaggacacggataccggacacgacacggacactgacacgccgacatcgctagtaatttgagaaaattacataattcagtgtaatta 6326312  T
Q  279 caagtgtc 286  Q
    ||||||||    
T  6326311 caagtgtc 6326304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 180 - 290
Target Start/End: Original strand, 41995417 - 41995525
Alignment:
Q  180 atgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattac 279  Q
    |||||||||||||||||||||||| || ||| || || | |||||| |||| |||||||||||||||||| |||||||||||||||||||  ||||||      
T  41995417 atgaagcacggatacggacacggacactggatacgacacagacactgacacgccgacacaactaataattcgaaaaaatcacataattcaatgtaatt-- 41995514  T
Q  280 aagtgtcggtg 290  Q
    |||||||||||    
T  41995515 aagtgtcggtg 41995525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 188 - 293
Target Start/End: Original strand, 21541984 - 21542089
Alignment:
Q  188 cggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcg 287  Q
    |||||||||||||||| ||| ||||| || | |||| | |||  ||||||||||||||||||| |||| || ||||||||||| ||||||||||||||||    
T  21541984 cggatacggacacggacaccagacacgacacagacattgacatgccgacacaactaataatttaaaaagataacataattcagtgtaattacaagtgtcg 21542083  T
Q  288 gtgtcg 293  Q
    ||||||    
T  21542084 gtgtcg 21542089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 227 - 292
Target Start/End: Original strand, 42893353 - 42893418
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    ||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  42893353 acacaccgacacagctaataatttgaaaaaatcacataatccagtgtaattacaagtgtcggtgtc 42893418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 193 - 293
Target Start/End: Complemental strand, 37328944 - 37328844
Alignment:
Q  193 acggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    ||||||||||| |||| |||| || |||||||| | ||||||||||| | ||||||||| |||||||||| ||||||| ||||||||| |||||||||||    
T  37328944 acggacacggacaccgaacacgacacggacactgatacaccgacacagcaaataatttgtaaaaatcacaaaattcagtgtaattacatgtgtcggtgtc 37328845  T
Q  293 g 293  Q
    |    
T  37328844 g 37328844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 179 - 270
Target Start/End: Original strand, 6770488 - 6770579
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcag 270  Q
    ||||||||||||||||||| ||||| |||| |||  || |||||||| |||||| ||||||||||||||||| | |||||||||||||||||    
T  6770488 tatgaagcacggatacggatacggacaccgaacatgacacggacactgacacactgacacaactaataatttaagaaaatcacataattcag 6770579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 227 - 294
Target Start/End: Original strand, 33178018 - 33178085
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||| ||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||    
T  33178018 acacgccgacacaactaataatttaaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgg 33178085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 218 - 293
Target Start/End: Original strand, 39698525 - 39698600
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||||| |||| | |||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  39698525 cggacactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcg 39698600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 218 - 288
Target Start/End: Original strand, 14674253 - 14674323
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcgg 288  Q
    |||||||| |||| |||||||| ||||||||||||||||||||||||||| || |||||||||||||||||    
T  14674253 cggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcgg 14674323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 220 - 293
Target Start/End: Original strand, 31084309 - 31084382
Alignment:
Q  220 gacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||| |||| |||||||| |||||||||||||||||||||||||||||  |||||||||||||||| |||||    
T  31084309 gacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcgatgtcg 31084382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 235 - 294
Target Start/End: Complemental strand, 21576803 - 21576744
Alignment:
Q  235 acacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  21576803 acacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcgg 21576744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 179 - 294
Target Start/End: Complemental strand, 24906415 - 24906300
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||| ||| ||||| ||||||   ||||||||| || || ||||| |||| || |||||  ||||||||||||||||| ||||||||||| |||||||    
T  24906415 tatgaaacaccgatacagacacgagcaccggacacgacacgaacactgacacgccaacacagataataatttgaaaaaatgacataattcagtgtaatta 24906316  T
Q  279 caagtgtcggtgtcgg 294  Q
    ||||||||||| ||||    
T  24906315 caagtgtcggtatcgg 24906300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 198 - 285
Target Start/End: Original strand, 4105221 - 4105310
Alignment:
Q  198 cacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaa--atcacataattcagcgtaattacaagtgt 285  Q
    |||||||||||||||  || |||| ||| |||| |||||| ||||||||||||||||||  |||||||||||||| ||||||||||||||    
T  4105221 cacggataccggacatgacacggatactgacacgccgacataactaataatttgaaaaaagatcacataattcagtgtaattacaagtgt 4105310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 231 - 293
Target Start/End: Original strand, 7677702 - 7677764
Alignment:
Q  231 accgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||||||| |||||||||||||||||||||||||||||| | ||||| ||||||||||||||    
T  7677702 accgacacagctaataatttgaaaaaatcacataattcagtgcaattagaagtgtcggtgtcg 7677764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 179 - 293
Target Start/End: Original strand, 30183494 - 30183608
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||| |||||||||||||| || ||  |||||||  | |||||| | |  |||||||||||||||||||||||| ||||||| |||| |  ||||||    
T  30183494 tatgaaggacggatacggacacagacactagacacaatacagacactgatatgccgacacaactaataatttgaaaatatcacattattcggtttaatta 30183593  T
Q  279 caagtgtcggtgtcg 293  Q
    |||||||||||||||    
T  30183594 caagtgtcggtgtcg 30183608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 218 - 315
Target Start/End: Original strand, 8420011 - 8420107
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgggacacgcctaatccgaagagt 315  Q
    |||||| | |||| |||||| | |||||||||||||||||| ||||||||||  ||||||||||||||||||||| |||| |||||||| ||| ||||    
T  8420011 cggacaatgacacgccgacatagctaataatttgaaaaaataacataattcaatgtaattacaagtgtcggtgtc-ggacgcgcctaattcgaggagt 8420107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 208 - 286
Target Start/End: Complemental strand, 15405138 - 15405062
Alignment:
Q  208 ggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtc 286  Q
    |||||| || |||||||||||||   ||||||||||||||||||||||||||| ||||||||  |||||||||||||||    
T  15405138 ggacacgacacggacactaacact--gacacaactaataatttgaaaaaatcatataattcaatgtaattacaagtgtc 15405062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 179 - 293
Target Start/End: Original strand, 6401443 - 6401557
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||||||||||||| |||||||| ||||||| | || |||||||  |||| |||||||||||||   ||| | ||||||||| ||| ||| |||||||    
T  6401443 tatgaagcacggatacagacacggacaccggacgcgacacggacaccgacacgccgacacaactaaattttttagaaaatcacaaaatacagtgtaatta 6401542  T
Q  279 caagtgtcggtgtcg 293  Q
     | ||||||||||||    
T  6401543 tatgtgtcggtgtcg 6401557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 227 - 292
Target Start/End: Original strand, 30135306 - 30135372
Alignment:
Q  227 acacaccgacacaactaataatttgaaaa-aatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    |||| |||||||||||||||||||||||| |||||||||| |||  |||||||||||||||||||||    
T  30135306 acacgccgacacaactaataatttgaaaaaaatcacataactcattgtaattacaagtgtcggtgtc 30135372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 227 - 293
Target Start/End: Original strand, 41633728 - 41633794
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||| |||||||| |||||||||||||||| | ||||||||||| |||||||||| |||||||||||    
T  41633728 acactccgacacagctaataatttgaaaaatttacataattcagtgtaattacaaatgtcggtgtcg 41633794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 193 - 278
Target Start/End: Original strand, 22013373 - 22013458
Alignment:
Q  193 acggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||| ||||| ||||||||| || |||||||| |||| |||||||| ||||||||||| |||||| |||||||| || |||||||    
T  22013373 acggatacggacaccggacacgacacggacactgacacgccgacacagctaataatttggaaaaattacataatttagtgtaatta 22013458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 179 - 292
Target Start/End: Complemental strand, 36642875 - 36642763
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||| ||||||||||| | | ||||||||| || |||||||| |||| ||||||||  ||||||||||||||| | ||||| || || |||| ||    
T  36642875 tatgaagcatggatacggacaag-acaccggacacgacacggacactgacacgccgacacagttaataatttgaaaaagtgacatattttagtgtaaata 36642777  T
Q  279 caagtgtcggtgtc 292  Q
     |||||||||||||    
T  36642776 taagtgtcggtgtc 36642763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 232 - 294
Target Start/End: Original strand, 15883985 - 15884048
Alignment:
Q  232 ccgacacaactaataatttgaaaa-aatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||||| | |||||||| |||| ||||||||||||||| |||||||||||||||||||||||    
T  15883985 ccgacacagcaaataatttaaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgg 15884048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 179 - 293
Target Start/End: Complemental strand, 25888409 - 25888293
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataattt--gaaaaaatcacataattcagcgtaat 276  Q
    |||||||||||||| | |||||||| || |||||| || |||| ||  ||||||| |||| |||||||||||   ||||||||| ||||||||| |||||    
T  25888409 tatgaagcacggatccagacacggacacaggacacgacacggatacagacacaccaacactactaataattttaaaaaaaatcatataattcagtgtaat 25888310  T
Q  277 tacaagtgtcggtgtcg 293  Q
    || |||| || ||||||    
T  25888309 tataagtctccgtgtcg 25888293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 241 - 290
Target Start/End: Original strand, 43001807 - 43001856
Alignment:
Q  241 ctaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtg 290  Q
    |||||||||||||||||| ||||||||||| |||||||||||||| ||||    
T  43001807 ctaataatttgaaaaaattacataattcagtgtaattacaagtgttggtg 43001856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 229 - 293
Target Start/End: Complemental strand, 5894897 - 5894833
Alignment:
Q  229 acaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||| ||||||||||||||||||||||||||| |||||| |   ||| |||||||||||||||||    
T  5894897 acacggacacaactaataatttgaaaaaatcatataatttaatctaactacaagtgtcggtgtcg 5894833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 241 - 289
Target Start/End: Complemental strand, 7218319 - 7218271
Alignment:
Q  241 ctaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggt 289  Q
    |||||||||| || |||||||||||||||| ||||||||||||||||||    
T  7218319 ctaataatttaaataaatcacataattcagtgtaattacaagtgtcggt 7218271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 219 - 294
Target Start/End: Original strand, 14422889 - 14422962
Alignment:
Q  219 ggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    ||||||| ||||||||| ||| ||||||||||  |||||||||||||||||| ||||||| |||| ||| ||||||    
T  14422889 ggacactgacacaccgatacagctaataattt--aaaaatcacataattcagtgtaattataagtttcgatgtcgg 14422962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 294
Target Start/End: Complemental strand, 16203870 - 16203794
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    ||||||||||||  |||||||  |||||||||||| |||||| ||||||| || ||||||| | |||||||||||||    
T  16203870 cggacactaacatgccgacactgctaataatttgagaaaatctcataatttagtgtaattatatgtgtcggtgtcgg 16203794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 242 - 294
Target Start/End: Complemental strand, 28588725 - 28588673
Alignment:
Q  242 taataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    ||||||||||| ||||||||||||||||| ||||||| | |||||||||||||    
T  28588725 taataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtcgg 28588673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 40131624 - 40131680
Alignment:
Q  237 acaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||||||||||||||||||||||||||||||||  |||||| || | |||||||||    
T  40131624 acaactaataatttgaaaaaatcacataattcagtttaattataaatatcggtgtcg 40131680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 219 - 293
Target Start/End: Original strand, 3966488 - 3966562
Alignment:
Q  219 ggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||||| |||  |||||||  |||||||||||| ||||||||| ||||||| ||||||| | ||||||||||||    
T  3966488 ggacactgacatgccgacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcg 3966562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 205 - 267
Target Start/End: Complemental strand, 19552631 - 19552569
Alignment:
Q  205 accggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataatt 267  Q
    |||| |||| || |||||||| |||| ||||||||  ||||||||||||||||||||||||||    
T  19552631 accgaacacgacacggacactgacacgccgacacagttaataatttgaaaaaatcacataatt 19552569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 193 - 294
Target Start/End: Complemental strand, 19820494 - 19820395
Alignment:
Q  193 acggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    ||||| ||||| ||||||||| || |||||||| |||| |||||||  |||||||||||| |||||  ||||||| ||   ||||| |||||||||||||    
T  19820494 acggatacggacaccggacacgacacggacactgacactccgacaccgctaataatttgagaaaat--cataattaagtacaattataagtgtcggtgtc 19820397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 213
Target Start/End: Original strand, 34276802 - 34276836
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacac 213  Q
    |||||||||||||||||||||||||||||||||||    
T  34276802 tatgaagcacggatacggacacggataccggacac 34276836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 43564891 - 43564941
Alignment:
Q  244 ataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||||| ||||||||||||||| || ||||||| |||||||||||||||    
T  43564891 ataatttggaaaaatcacataatttagtgtaattataagtgtcggtgtcgg 43564941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 18316989 - 18316952
Alignment:
Q  229 acaccgacacaactaataatttgaaaaaatcacataat 266  Q
    |||||||||||||||||||||| |||||||||||||||    
T  18316989 acaccgacacaactaataattttaaaaaatcacataat 18316952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 241 - 294
Target Start/End: Complemental strand, 30502440 - 30502387
Alignment:
Q  241 ctaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||||||||| |||||||| |||||||| ||||||| | |||||||||||||    
T  30502440 ctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcgg 30502387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 241 - 294
Target Start/End: Complemental strand, 30542783 - 30542730
Alignment:
Q  241 ctaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||||||||| |||||||| |||||||| ||||||| | |||||||||||||    
T  30542783 ctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcgg 30542730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 241 - 293
Target Start/End: Complemental strand, 6471941 - 6471889
Alignment:
Q  241 ctaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||||||||| ||||||||||||||||| ||||||| | |||| |||||||    
T  6471941 ctaataatttgagaaaatcacataattcagtgtaattatatgtgtgggtgtcg 6471889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 233 - 289
Target Start/End: Original strand, 12159951 - 12160007
Alignment:
Q  233 cgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggt 289  Q
    |||||||||||||||||| |||||| ||||||||| |  |||||||||| |||||||    
T  12159951 cgacacaactaataatttaaaaaaaacacataatttaatgtaattacaaatgtcggt 12160007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 227 - 286
Target Start/End: Original strand, 17088277 - 17088337
Alignment:
Q  227 acacaccgacacaactaataatttg-aaaaaatcacataattcagcgtaattacaagtgtc 286  Q
    |||||| |||||| ||||||||||| |||||||||||||||| || || ||||||||||||    
T  17088277 acacactgacacatctaataatttgaaaaaaatcacataatttagtgtgattacaagtgtc 17088337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 227 - 287
Target Start/End: Original strand, 31264431 - 31264491
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcg 287  Q
    ||||| |||||||| ||||||||||| ||||| ||||||||||| ||||| | ||||||||    
T  31264431 acacatcgacacaagtaataatttgagaaaatgacataattcagtgtaatcataagtgtcg 31264491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 197 - 269
Target Start/End: Complemental strand, 41558779 - 41558707
Alignment:
Q  197 acacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattca 269  Q
    ||||||| |||||| || || |||||||| |||||  ||||||| ||||||||||| ||||| ||||||||||    
T  41558779 acacggacaccggatacgacacggacactgacacattgacacaaataataatttgagaaaatgacataattca 41558707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 266
Target Start/End: Original strand, 17122994 - 17123080
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataat 266  Q
    |||||||||| |||| ||||||||| | |||||| |||  ||||||| |||| || ||||  |||||||||||| |||||||||||||    
T  17122994 tatgaagcacagata-ggacacggacatcggacataacatggacactgacacgccaacaccgctaataatttgagaaaatcacataat 17123080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 282
Target Start/End: Complemental strand, 22299546 - 22299492
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaag 282  Q
    ||||||||||||| |||||||||| |||||||||||| ||||||  ||||||||||    
T  22299546 acacaccgacacagctaataattt-aaaaaatcacatgattcagtataattacaag 22299492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 287
Target Start/End: Complemental strand, 23016105 - 23015995
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaaca--caccgacacaactaataatttgaaaaaatcacataattcagcgtaat 276  Q
    |||||||||||||||||||||||||  |||||||| || |||||||  |||  | | ||||    |||| |||||| ||||||||||||||||| |||||    
T  23016105 tatgaagcacggatacggacacggactccggacacgacacggacaccgacactctctgacatcgttaatcatttgagaaaatcacataattcagtgtaat 23016006  T
Q  277 tacaagtgtcg 287  Q
    || | ||||||    
T  23016005 tataggtgtcg 23015995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 227 - 269
Target Start/End: Complemental strand, 22611803 - 22611761
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattca 269  Q
    |||| |||||||  |||||||||||||||||||||||||||||    
T  22611803 acacgccgacactcctaataatttgaaaaaatcacataattca 22611761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 220 - 278
Target Start/End: Complemental strand, 24273103 - 24273045
Alignment:
Q  220 gacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||||| |||| ||||||  || |||||||| ||||||||||||||||| |||||||    
T  24273103 gacactaagacactgacacagttattaatttgagaaaatcacataattcagtgtaatta 24273045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 220 - 278
Target Start/End: Original strand, 24389111 - 24389169
Alignment:
Q  220 gacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||||| |||| ||||||  || |||||||| ||||||||||||||||| |||||||    
T  24389111 gacactaagacactgacacagttattaatttgagaaaatcacataattcagtgtaatta 24389169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 232 - 294
Target Start/End: Original strand, 27932233 - 27932295
Alignment:
Q  232 ccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||||  |||||||||||| ||||| ||||||||||| |||||||||| | | ||||||||    
T  27932233 ccgacaccgctaataatttgagaaaattacataattcagtgtaattacaaatcttggtgtcgg 27932295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 232 - 286
Target Start/End: Complemental strand, 38464425 - 38464371
Alignment:
Q  232 ccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtc 286  Q
    ||||||||||||||||||||| |||||||||| |||||  | ||||| |||||||    
T  38464425 ccgacacaactaataatttgagaaaatcacattattcattgaaattataagtgtc 38464371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 220 - 293
Target Start/End: Original strand, 2436908 - 2436981
Alignment:
Q  220 gacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||| |||| |||||||  ||||||||||| ||||||||||||||||   || |||| | ||||||||||||    
T  2436908 gacactgacacgccgacaccgctaataatttgcaaaaatcacataattcgttgtgattatatgtgtcggtgtcg 2436981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 242 - 287
Target Start/End: Complemental strand, 5468029 - 5467984
Alignment:
Q  242 taataatttgaaaaaatcacataattcagcgtaattacaagtgtcg 287  Q
    ||||||||||| ||||||||||||||||| ||||||| | ||||||    
T  5468029 taataatttgataaaatcacataattcagtgtaattataggtgtcg 5467984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 252 - 293
Target Start/End: Original strand, 12199948 - 12199989
Alignment:
Q  252 aaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||||||||||||||||   ||||||||||||||||||||    
T  12199948 aaaaaatcacataattcagtacaattacaagtgtcggtgtcg 12199989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 6e-33; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 180 - 292
Target Start/End: Complemental strand, 11061189 - 11061077
Alignment:
Q  180 atgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattac 279  Q
    |||||||||||||||||||||||| | |||| || || |||||||| ||||||||||||| ||||||||||||||||||||||||||| ||  |||||||    
T  11061189 atgaagcacggatacggacacggacatcggatacgacacggacactgacacaccgacacagctaataatttgaaaaaatcacataatttagtataattac 11061090  T
Q  280 aagtgtcggtgtc 292  Q
    |||||||||||||    
T  11061089 aagtgtcggtgtc 11061077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 179 - 294
Target Start/End: Original strand, 25481847 - 25481962
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||||||||||||| |||||||| | ||||||||||  ||||| | |||| |||||||| |||||||||||||||||||||||||||||| |||||||    
T  25481847 tatgaagcacggatacagacacggacatcggacacaacatggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 25481946  T
Q  279 caagtgtcggtgtcgg 294  Q
    ||||||| ||||||||    
T  25481947 caagtgttggtgtcgg 25481962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 188 - 293
Target Start/End: Original strand, 24339596 - 24339701
Alignment:
Q  188 cggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcg 287  Q
    |||||||||| ||||| ||||||||| ||  ||||| | |||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  24339596 cggatacggatacggacaccggacacgacatggacattgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 24339695  T
Q  288 gtgtcg 293  Q
    ||||||    
T  24339696 gtgtcg 24339701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 193 - 305
Target Start/End: Original strand, 27945000 - 27945112
Alignment:
Q  193 acggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    ||||| ||||| ||||||||| || |||||||| |||| ||||||| ||||||||||||| ||||| ||||||||||| |||||||||||||||||||||    
T  27945000 acggatacggacaccggacacgacacggacactgacacgccgacaccactaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtc 27945099  T
Q  293 gggacacgcctaa 305  Q
    | | |||||||||    
T  27945100 gtgtcacgcctaa 27945112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 179 - 293
Target Start/End: Complemental strand, 5409950 - 5409836
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||||||||||||| ||||| || |||||| || ||  ||||||| |||| | || ||| |||||||||||||||||||||||||||||| | |||||    
T  5409950 tatgaagcacggatacagacacagacaccggatacgacatggacactgacacgctgatacagctaataatttgaaaaaatcacataattcagtgcaatta 5409851  T
Q  279 caagtgtcggtgtcg 293  Q
    |||||||||||||||    
T  5409850 caagtgtcggtgtcg 5409836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 228 - 293
Target Start/End: Original strand, 3991318 - 3991383
Alignment:
Q  228 cacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  3991318 cacaccgacacaactaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcg 3991383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 220 - 293
Target Start/End: Complemental strand, 9408407 - 9408334
Alignment:
Q  220 gacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  9408407 gacactgacacaccgacacaattaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 9408334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 179 - 293
Target Start/End: Original strand, 9778453 - 9778559
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||||||||||||||||| ||||||||| || ||||||||        |||||| || |||||||||||||||||||||||||||  ||||||    
T  9778453 tatgaagcacggatacggacacggacaccggacacgacacggacact--------gacacagctgataatttgaaaaaatcacataattcagtataatta 9778544  T
Q  279 caagtgtcggtgtcg 293  Q
    |||||||||||||||    
T  9778545 caagtgtcggtgtcg 9778559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 179 - 293
Target Start/End: Original strand, 13770636 - 13770750
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||| |||||||| |||| |||| | ||||||| || |||||||| | || |||||||| |||||||||| ||||||| ||||||||||| |||||||    
T  13770636 tatgaaacacggatatggactcggacatcggacacgacacggacactgatacgccgacacagctaataatttaaaaaaattacataattcagtgtaatta 13770735  T
Q  279 caagtgtcggtgtcg 293  Q
    ||||||||| |||||    
T  13770736 caagtgtcgttgtcg 13770750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 174 - 293
Target Start/End: Original strand, 35861898 - 35862023
Alignment:
Q  174 tcacatatgaagcacggatacggacacggataccggacacaactcggacactaacaca------ccgacacaactaataatttgaaaaaatcacataatt 267  Q
    |||| |||||||||||||||||||| |||| ||||||||| || | |||||||||||       ||||||||||||||||||||||||||||||||||||    
T  35861898 tcacttatgaagcacggatacggacgcggacaccggacacgacacagacactaacactaacacgccgacacaactaataatttgaaaaaatcacataatt 35861997  T
Q  268 cagcgtaattacaagtgtcggtgtcg 293  Q
    ||  ||||||  ||||||| ||||||    
T  35861998 caatgtaattgtaagtgtctgtgtcg 35862023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 227 - 294
Target Start/End: Original strand, 8234139 - 8234206
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||| |||||||||    
T  8234139 acacaccgacacaactaataatttgaaaaaataacataattcagtgtagttacaagtgccggtgtcgg 8234206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 218 - 293
Target Start/End: Complemental strand, 18215261 - 18215186
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||||||||||| ||||| || |||||||||||||||||||||||||| ||| ||| ||||||||||||||||||    
T  18215261 cggacactaacacgccgacgcagctaataatttgaaaaaatcacataatgcagtgtagttacaagtgtcggtgtcg 18215186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 193 - 295
Target Start/End: Original strand, 24105638 - 24105739
Alignment:
Q  193 acggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    ||||| |||||||| |||||| || |||||||| |||| |||||||| ||||||||||||||||||  ||| |||||| ||||||||||||||||| |||    
T  24105638 acggatacggatac-ggacacgacacggacactgacacgccgacacagctaataatttgaaaaaattgcatgattcagtgtaattacaagtgtcggagtc 24105736  T
Q  293 ggg 295  Q
    |||    
T  24105737 ggg 24105739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 221 - 293
Target Start/End: Complemental strand, 32094093 - 32094020
Alignment:
Q  221 acactaacacaccgacacaactaataatttgaaaaaa-tcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||||||  || ||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||    
T  32094093 acactaacatgccaacacaactaataatttgaaaaaaatcacataattcagtgtaattacaaatgtcggtgtcg 32094020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 208 - 293
Target Start/End: Complemental strand, 43027554 - 43027469
Alignment:
Q  208 ggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||| || |||||||| ||||  |||| || |||||||||||||||||||||||||| ||| |||| |||||||||||||||||    
T  43027554 ggacacgacacggacactgacacggcgacccagctaataatttgaaaaaatcacataatgcagtgtaaatacaagtgtcggtgtcg 43027469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 7438704 - 7438764
Alignment:
Q  232 ccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    ||||||||  ||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  7438704 ccgacacagttaataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 7438764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 232 - 293
Target Start/End: Complemental strand, 11272649 - 11272586
Alignment:
Q  232 ccgacacaactaataatttgaaaaaatcac--ataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||||||||| ||||||||||||||||||  ||||||||| ||||||||||||||||||||||    
T  11272649 ccgacacaactgataatttgaaaaaatcacatataattcagtgtaattacaagtgtcggtgtcg 11272586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 179 - 294
Target Start/End: Original strand, 21880099 - 21880212
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||| |||| |||||||| ||||||||  || || |||||||||    ||||   |||||||||||| ||||| ||||||||||| |||||||    
T  21880099 tatgaagcacgcatacagacacggacaccggaca--acacgaacactaacatgtggacatcgctaataatttgagaaaattacataattcagtgtaatta 21880196  T
Q  279 caagtgtcggtgtcgg 294  Q
    ||||||||||||||||    
T  21880197 caagtgtcggtgtcgg 21880212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 241 - 289
Target Start/End: Complemental strand, 26033513 - 26033465
Alignment:
Q  241 ctaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggt 289  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26033513 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggt 26033465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 218 - 293
Target Start/End: Original strand, 10042921 - 10042996
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||||| |||| ||||||| ||||||||||||| ||| |||||||||| |||||||||| ||||||| ||||||    
T  10042921 cggacacttacacgccgacaccactaataatttgataaattcacataatttagcgtaattataagtgtcagtgtcg 10042996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 179 - 294
Target Start/End: Original strand, 21826218 - 21826333
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||| | ||||||| ||| ||| ||||| ||   ||||||||||| ||||||| ||||||||||| |||||||||||||| ||||  |||| |    
T  21826218 tatgaagcacgaagacggacatggacaccagacacgacatagacactaacacgccgacacgactaataatttaaaaaaatcacataactcagtctaataa 21826317  T
Q  279 caagtgtcggtgtcgg 294  Q
     | |||||||||||||    
T  21826318 tatgtgtcggtgtcgg 21826333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 183 - 294
Target Start/End: Original strand, 26733253 - 26733364
Alignment:
Q  183 aagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaag 282  Q
    ||||||||| ||||| || || ||| ||||| || |||||||| ||||  ||||||  |||||||||||| |||||||||||||||||  |||||| | |    
T  26733253 aagcacggaaacggataccgacaccagacacgacacggacactgacacgtcgacaccgctaataatttgacaaaatcacataattcagtctaattaaatg 26733352  T
Q  283 tgtcggtgtcgg 294  Q
    ||||||||||||    
T  26733353 tgtcggtgtcgg 26733364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 179 - 293
Target Start/End: Original strand, 1433399 - 1433513
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||||||||||||||| |||||| |||| |||| || |||||| | |||| |||||||   ||||||||||| |||||||||| |||  | |||||||    
T  1433399 tatgaagcacggatacgggcacggacaccgaacacgacacggacattgacacgccgacaccgttaataatttgagaaaatcacatcatttggtgtaatta 1433498  T
Q  279 caagtgtcggtgtcg 293  Q
     | ||||||||||||    
T  1433499 tatgtgtcggtgtcg 1433513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 11665499 - 11665441
Alignment:
Q  234 gacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    |||||||||||||||||||||||||||||||||||||  |||||| |||||||| ||||    
T  11665499 gacacaactaataatttgaaaaaatcacataattcagtctaattataagtgtcgatgtc 11665441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 179 - 293
Target Start/End: Original strand, 18038945 - 18039058
Alignment:
Q  179 tatgaagcacggatacggacacgg-ataccggacacaactcggacactaacacaccgacacaactaataat---ttgaaaa-aatcacataattcagcgt 273  Q
    |||||||||||||||||||||||| | || ||||||      |||||| |||  |||||||||||||||||   ||||||| ||||||||||||||| ||    
T  18038945 tatgaagcacggatacggacacgggacacgggacac------gacactgacattccgacacaactaataataatttgaaaaaaatcacataattcagtgt 18039038  T
Q  274 aattacaagtgtcggtgtcg 293  Q
    ||||||||||||||||||||    
T  18039039 aattacaagtgtcggtgtcg 18039058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 198 - 292
Target Start/End: Original strand, 19206014 - 19206108
Alignment:
Q  198 cacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    |||||||||| ||||| || ||||||| ||||| |||||||  |||||||||||| ||||||||||||||||   |||||| | |||||||||||    
T  19206014 cacggataccagacacgacacggacaccaacacgccgacaccgctaataatttgagaaaatcacataattcattataattatatgtgtcggtgtc 19206108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 227 - 293
Target Start/End: Original strand, 25822648 - 25822714
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||| ||||||||||||||||||||||||||   || ||||||| ||||||||||||||||||||||    
T  25822648 acacgccgacacaactaataatttgaaaaaaaatcacaattcagtgtaattacaagtgtcggtgtcg 25822714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 180 - 293
Target Start/End: Original strand, 1885519 - 1885632
Alignment:
Q  180 atgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattac 279  Q
    ||||||||||||||| |||||||| ||||||||| || | || ||  ||||| ||||||   ||| | ||||||||||| ||||||||||  ||||| ||    
T  1885519 atgaagcacggatacagacacggacaccggacacgacactgatacggacacatcgacacggataaaattttgaaaaaatgacataattcaatgtaatcac 1885618  T
Q  280 aagtgtcggtgtcg 293  Q
    ||||||||||||||    
T  1885619 aagtgtcggtgtcg 1885632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 221 - 294
Target Start/End: Original strand, 20549778 - 20549851
Alignment:
Q  221 acactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    ||||| ||||||||||||  |||||||||||| |||||||| |||||||| ||||||| | |||||||||||||    
T  20549778 acactgacacaccgacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcggtgtcgg 20549851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 180 - 293
Target Start/End: Complemental strand, 21141095 - 21140982
Alignment:
Q  180 atgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattac 279  Q
    |||||||||||||||||||||||| |||| |||| || ||||| |  ||||  |||||| ||||||||||| | ||||||| ||||||||| || ||||     
T  21141095 atgaagcacggatacggacacggacaccgtacacgacacggacgccgacacgtcgacaccactaataatttaagaaaatcatataattcagtgtgattat 21140996  T
Q  280 aagtgtcggtgtcg 293  Q
    | ||||||| ||||    
T  21140995 aggtgtcggagtcg 21140982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 179 - 280
Target Start/End: Complemental strand, 29763288 - 29763187
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||| ||||||||| |||| || |||| |||| ||   |||||| ||||||| |||||||| |||||||||||||||||||||||| || ||| |||    
T  29763288 tatgaagtacggatacgaacacagacaccgaacacgacatagacactgacacaccaacacaacttataatttgaaaaaatcacataattaagtgtagtta 29763189  T
Q  279 ca 280  Q
    ||    
T  29763188 ca 29763187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 7058429 - 7058485
Alignment:
Q  237 acaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||||||||||||||||||||||  |||||||| |||||||||||||| |||||||    
T  7058429 acaactaataatttgaaaaaatcatgtaattcagtgtaattacaagtgttggtgtcg 7058485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 198 - 270
Target Start/End: Complemental strand, 11722193 - 11722121
Alignment:
Q  198 cacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcag 270  Q
    |||||||||||||||| || |||||||| |||| |||||||  |||| ||||||| |||||||||||||||||    
T  11722193 cacggataccggacacgacacggacactgacacgccgacaccgctaacaatttgagaaaatcacataattcag 11722121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 227 - 283
Target Start/End: Original strand, 11831425 - 11831481
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagt 283  Q
    ||||| |||||||||||||||||||||||||||| |||||| || ||||||||||||    
T  11831425 acacatcgacacaactaataatttgaaaaaatcatataatttagtgtaattacaagt 11831481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 179 - 291
Target Start/End: Original strand, 17851376 - 17851488
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||||||||||||| |||||||| ||||||||| ||  ||| ||  ||||| ||| ||  |||||||||| | ||||||||||||||||| |||||||    
T  17851376 tatgaagcacggatacagacacggacaccggacacgacatggataccgacacatcgataccgctaataattttagaaaatcacataattcagtgtaatta 17851475  T
Q  279 caagtgtcggtgt 291  Q
     | ||||| ||||    
T  17851476 tatgtgtctgtgt 17851488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 226 - 294
Target Start/End: Original strand, 28155562 - 28155630
Alignment:
Q  226 aacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    ||||| |||||||  |||||||||||| ||||| ||||||||| | |||||||||||||||||||||||    
T  28155562 aacacgccgacaccgctaataatttgagaaaattacataattcggtgtaattacaagtgtcggtgtcgg 28155630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 227 - 294
Target Start/End: Complemental strand, 7197363 - 7197296
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||| |||||||| |||||||||| |||||||||  |||||||  |||||||||||||||||||||||    
T  7197363 acacgccgacacagctaataatttaaaaaaatcatttaattcaatgtaattacaagtgtcggtgtcgg 7197296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 190 - 284
Target Start/End: Complemental strand, 13557847 - 13557750
Alignment:
Q  190 gatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaa---tcacataattcagcgtaattacaagtg 284  Q
    ||||| |||||||| ||||||||  || | |||||| |||| |||||| |||||||||||| ||||||   ||||||||||||| |||||||||||||    
T  13557847 gatacagacacggacaccggacatgacacagacactgacacgccgacaaaactaataatttaaaaaaaaaatcacataattcagtgtaattacaagtg 13557750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 219 - 294
Target Start/End: Original strand, 15680794 - 15680869
Alignment:
Q  219 ggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    ||||||| |||| |||||| | |||||||||  |||||||||||||||| || ||||||| |||||||||||||||    
T  15680794 ggacactgacacgccgacatagctaataattaaaaaaaatcacataatttagtgtaattataagtgtcggtgtcgg 15680869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 234 - 293
Target Start/End: Original strand, 19992001 - 19992060
Alignment:
Q  234 gacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||| |||||||||||| ||||||||||| ||||| ||||||| ||||||||||||||    
T  19992001 gacacagctaataatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcg 19992060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 207 - 278
Target Start/End: Original strand, 22868015 - 22868086
Alignment:
Q  207 cggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||||||| | |||||| |||| ||||||| ||||||||| ||| ||||||||||||||||| |||||||    
T  22868015 cggacacaacaccgacactgacacgccgacaccactaataatatgagaaaatcacataattcagtgtaatta 22868086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 207 - 278
Target Start/End: Complemental strand, 29787455 - 29787384
Alignment:
Q  207 cggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||| ||||| |||||| |||||| |||||||  |||||||||||| ||||||||||||||||| |||||||    
T  29787455 cggatacaacacggacattaacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaatta 29787384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 221 - 292
Target Start/End: Original strand, 33994199 - 33994270
Alignment:
Q  221 acactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    ||||| |||| ||||| |||||| |||||||||||  ||||||||||||| | |||||||||||||||||||    
T  33994199 acactgacacgccgacgcaactactaatttgaaaaggtcacataattcagtgcaattacaagtgtcggtgtc 33994270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 227 - 294
Target Start/End: Complemental strand, 40287422 - 40287356
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||| |||||||||| |||||||||||||||||| || |||||| |||||||||||||||||| ||||    
T  40287422 acacgccgacacaacgaataatttgaaaaaatcatat-attcagtgtaattacaagtgtcggtatcgg 40287356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 234 - 292
Target Start/End: Original strand, 13300410 - 13300468
Alignment:
Q  234 gacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    |||| |||||||||||||||||||||| ||||||||| |||||||| ||| ||||||||    
T  13300410 gacataactaataatttgaaaaaatcatataattcagtgtaattaccagtctcggtgtc 13300468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 220 - 293
Target Start/End: Original strand, 21560484 - 21560562
Alignment:
Q  220 gacactaacacaccgacacaactaataatttgaa-----aaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||| |||| |||| ||| |||||||||||||     ||||||||||||||||| ||||||||||||||||||||||    
T  21560484 gacactgacacgccgatacagctaataatttgaagaaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 21560562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 21864779 - 21864868
Alignment:
Q  207 cggacacaactcggacactaacacaccgacacaactaataatttg--aaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    ||||||| || |||||||  |||||| |||||| |||||||||||  ||||||||| |||||| || |||||||||||||||| ||||||    
T  21864779 cggacacgacacggacacggacacacggacacagctaataatttgaaaaaaaatcatataatttagtgtaattacaagtgtcgctgtcgg 21864868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 241 - 310
Target Start/End: Original strand, 3721100 - 3721168
Alignment:
Q  241 ctaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgggacacgcctaatccga 310  Q
    |||||||||||| |||||||||||||| ||  |||||| | ||||||||||| |||||||||||||||||    
T  3721100 ctaataatttgagaaaatcacataatttagtataattatatgtgtcggtgtc-ggacacgcctaatccga 3721168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 174 - 294
Target Start/End: Complemental strand, 18213153 - 18213032
Alignment:
Q  174 tcacatatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaa-taatttgaaaaaatcacataattcagcg 272  Q
    |||| |||||||||| |||||| ||||| | ||| ||||| || |||||||| | || ||||||||||||| |  ||| | |||||||||||||| || |    
T  18213153 tcacctatgaagcacagatacgaacacgaacaccagacacgacacggacactgatacgccgacacaactaattttttttagaaaatcacataatttagtg 18213054  T
Q  273 taattacaagtgtcggtgtcgg 294  Q
    |||||| | |||||||||||||    
T  18213053 taattatatgtgtcggtgtcgg 18213032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 241 - 294
Target Start/End: Original strand, 19213810 - 19213863
Alignment:
Q  241 ctaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||||||| ||||||||||||||| ||| |||| ||||||||||||||||||    
T  19213810 ctaataattttaaaaaatcacataatgcagtgtaaatacaagtgtcggtgtcgg 19213863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 294
Target Start/End: Original strand, 9482918 - 9482994
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||||| |||||||||||   || ||||||||| ||||||||| ||||||| ||||||| | |||||||||||||    
T  9482918 cggacactgacacaccgacatcgctgataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcgg 9482994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 242 - 293
Target Start/End: Original strand, 2334256 - 2334309
Alignment:
Q  242 taataatttgaaaa--aatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||||||||||||  |||||||||||| || ||||||||||||||||||||||    
T  2334256 taataatttgaaaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 2334309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 293
Target Start/End: Complemental strand, 22602824 - 22602710
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||| ||||||||||||||||  |||  |||| || | | |||| |||| |||||||    ||| |||||| ||||||||||||||||| |||||||    
T  22602824 tatgaaggacggatacggacacgggcacctaacacgacacaggcactgacacgccgacaccgtaaattatttgagaaaatcacataattcagtgtaatta 22602725  T
Q  279 caagtgtcggtgtcg 293  Q
     | ||||||||||||    
T  22602724 tatgtgtcggtgtcg 22602710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 293
Target Start/End: Complemental strand, 26329496 - 26329382
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||| |||| |||||||| || |||||| || | |||||| |||| ||||||    ||||||||||| |||| |||| ||||||| |||||||    
T  26329496 tatgaagcacgaatacagacacggacactggacacgacacagacactgacacgccgacatcgttaataatttgagaaaaacacacaattcagtgtaatta 26329397  T
Q  279 caagtgtcggtgtcg 293  Q
     | ||||||| ||||    
T  26329396 tatgtgtcggcgtcg 26329382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 277
Target Start/End: Original strand, 30730982 - 30731080
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatt 277  Q
    |||||||||| |||||||||||||| ||| ||||| || |  ||| |  ||| |||||||  | |||||||||| ||||||||||||||||| ||||||    
T  30730982 tatgaagcacagatacggacacggacaccagacacgacacatacagtggcacgccgacaccgcgaataatttgagaaaatcacataattcagtgtaatt 30731080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 219 - 277
Target Start/End: Original strand, 32308105 - 32308163
Alignment:
Q  219 ggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatt 277  Q
    ||||||| |||| |||||||  |||||||||||| ||||||||||||||||| ||||||    
T  32308105 ggacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaatt 32308163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 220 - 293
Target Start/End: Complemental strand, 6630985 - 6630912
Alignment:
Q  220 gacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||| |||| ||||||| ||||||||||||| ||| |||| |||||||| ||||||| | |||||| |||||    
T  6630985 gacactgacacgccgacaccactaataatttgagaaagtcacttaattcagtgtaattatatgtgtcgatgtcg 6630912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 287
Target Start/End: Original strand, 43249957 - 43250046
Alignment:
Q  198 cacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcg 287  Q
    |||||| ||||||||  || |||||||| |||| |||||||   ||||||||||| ||||| ||||||| ||| ||||||| ||||||||    
T  43249957 cacggacaccggacaagacacggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcg 43250046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 5835245 - 5835305
Alignment:
Q  232 ccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    ||||||| ||||||| ||||| ||||| ||||||||||| ||||||| | |||||||||||    
T  5835245 ccgacaccactaatagtttgagaaaataacataattcagtgtaattatatgtgtcggtgtc 5835305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 207 - 291
Target Start/End: Original strand, 15902795 - 15902879
Alignment:
Q  207 cggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgt 291  Q
    ||||||| || | |||||| |||  ||||||| | ||||||||||| |||||||||||||| || ||||||| | ||||||||||    
T  15902795 cggacacgacacagacactgacatgccgacaccaataataatttgataaaatcacataatttagtgtaattatatgtgtcggtgt 15902879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 248 - 292
Target Start/End: Original strand, 48438560 - 48438604
Alignment:
Q  248 tttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    ||||||||||||||||||||||  ||||||||| |||||||||||    
T  48438560 tttgaaaaaatcacataattcaatgtaattacacgtgtcggtgtc 48438604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 241 - 292
Target Start/End: Original strand, 1401032 - 1401083
Alignment:
Q  241 ctaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    |||||||||||| ||| ||||||||||||| ||||||| |||| ||||||||    
T  1401032 ctaataatttgagaaactcacataattcagtgtaattataagtatcggtgtc 1401083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 293
Target Start/End: Complemental strand, 11890970 - 11890919
Alignment:
Q  242 taataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||||||||||||||||| ||||||||| |||||||  ||||| |||||||    
T  11890970 taataatttgaaaaaatcatataattcagtgtaattatgagtgtaggtgtcg 11890919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 234 - 293
Target Start/End: Complemental strand, 18013133 - 18013074
Alignment:
Q  234 gacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||| ||||||||||| ||||||| ||||||||||| ||||||| | ||||| ||||||    
T  18013133 gacactactaataatttaaaaaaattacataattcagtgtaattatatgtgtcagtgtcg 18013074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 317
Target Start/End: Original strand, 38143231 - 38143305
Alignment:
Q  242 taataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgggacacgcctaatccgaagagtgt 317  Q
    |||||||||||||||||||||||||| |  ||||||| | |||| ||||||  ||||| |||||||||| ||||||    
T  38143231 taataatttgaaaaaatcacataatttaatgtaattatatgtgttggtgtc-agacacacctaatccgaggagtgt 38143305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 278
Target Start/End: Original strand, 1656629 - 1656720
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||| ||||||| ||||||||||| ||||||| || |||||||        ||||||||||||   ||| ||||||||||||||||||| |||||||    
T  1656629 tatgaagtacggatatggacacggatatcggacacgacacggacac--------cgacacaactaaattttttaaaaaatcacataattcagtgtaatta 1656720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 229 - 267
Target Start/End: Original strand, 4024022 - 4024060
Alignment:
Q  229 acaccgacacaactaataatttgaaaaaatcacataatt 267  Q
    |||||||||||||||||||||| ||||||| ||||||||    
T  4024022 acaccgacacaactaataatttaaaaaaatgacataatt 4024060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 218 - 280
Target Start/End: Original strand, 23191880 - 23191942
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattaca 280  Q
    |||||||| | || |||||||  |||||||||||| ||||||||||| ||||| |||||||||    
T  23191880 cggacactgatacgccgacaccgctaataatttgagaaaatcacatatttcagtgtaattaca 23191942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 233 - 291
Target Start/End: Original strand, 41020495 - 41020553
Alignment:
Q  233 cgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgt 291  Q
    ||||||||||||||||||  ||||||||||||||| || ||||||| | | ||||||||    
T  41020495 cgacacaactaataatttacaaaaatcacataatttagtgtaattatatgcgtcggtgt 41020553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 241 - 278
Target Start/End: Original strand, 2424621 - 2424658
Alignment:
Q  241 ctaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  2424621 ctaataatttgagaaaatcacataattcagtgtaatta 2424658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 293
Target Start/End: Original strand, 49107795 - 49107879
Alignment:
Q  208 ggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||| || ||||| || ||||||||||||  |||||||||||| |||| ||||||||| || || |||| | ||||||||||||    
T  49107795 ggacacgacacggactctgacacaccgacaccgctaataatttgagaaaa-cacataattgagtgtgattatatgtgtcggtgtcg 49107879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 6e-33; HSPs: 74)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 179 - 295
Target Start/End: Complemental strand, 10335400 - 10335284
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||||||||| ||||||| ||||||||| || |||||||| |||| ||||||||||||||||||||||||| ||||||| || || |||| ||    
T  10335400 tatgaagcacggatacgaacacggacaccggacacgacacggacactgacacgccgacacaactaataatttgaaaaagtcacatattttagtgtaaata 10335301  T
Q  279 caagtgtcggtgtcggg 295  Q
    |||||||||||||||||    
T  10335300 caagtgtcggtgtcggg 10335284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 179 - 294
Target Start/End: Complemental strand, 16000130 - 16000015
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||||||||||||||||| |||| |||| || | |||||| |||| ||||||||||||||||||| ||||||| ||||||||||| |||| ||    
T  16000130 tatgaagcacggatacggacacggacaccgaacacgacacagacactgacacgccgacacaactaataatttaaaaaaataacataattcagtgtaacta 16000031  T
Q  279 caagtgtcggtgtcgg 294  Q
    ||||||||||||||||    
T  16000030 caagtgtcggtgtcgg 16000015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 179 - 293
Target Start/End: Complemental strand, 15796408 - 15796294
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||||||| ||||||||| ||||||||| || |||||| | |||| ||||||||  ||||||||||||||||||| ||||||||| |||||||    
T  15796408 tatgaagcacggatatggacacggacaccggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcatataattcagtgtaatta 15796309  T
Q  279 caagtgtcggtgtcg 293  Q
    ||| |||||||||||    
T  15796308 caattgtcggtgtcg 15796294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 179 - 293
Target Start/End: Complemental strand, 750733 - 750618
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacacta-acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatt 277  Q
    ||||||||||||||||||||||||| ||||||||| || ||||||||  ||||  ||||||||||||||||||||||| ||||||||||||   | ||||    
T  750733 tatgaagcacggatacggacacggacaccggacacgacacggacacttgacacggcgacacaactaataatttgaaaatatcacataattcgctgcaatt 750634  T
Q  278 acaagtgtcggtgtcg 293  Q
    ||||||||||||||||    
T  750633 acaagtgtcggtgtcg 750618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 179 - 294
Target Start/End: Original strand, 21479069 - 21479178
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||| ||||||||||||||| |||||||||      |||||| |||| |||||||| |||||||||||||||||||||| ||||||| |||||||    
T  21479069 tatgaagcatggatacggacacggacaccggacac------gacactgacacgccgacacagctaataatttgaaaaaatcacacaattcagtgtaatta 21479162  T
Q  279 caagtgtcggtgtcgg 294  Q
    | ||||||||||||||    
T  21479163 ctagtgtcggtgtcgg 21479178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 198 - 293
Target Start/End: Original strand, 28917965 - 28918060
Alignment:
Q  198 cacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||| ||||||||| || |||| ||| |||| |||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  28917965 cacggacaccggacacgacacggaaactgacacgccgacatagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 28918060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 179 - 317
Target Start/End: Complemental strand, 35994851 - 35994718
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||||||||||||| ||| ||||||||| ||  ||||| | |||  |||||||| |||||||||||| ||||||||||||||||| |||||||    
T  35994851 tatgaagcacggatacggacatggacaccggacacgacatggacaatgacaagccgacacagctaataatttga-aaaatcacataattcagtgtaatta 35994753  T
Q  279 caagtgtcggtgtcgggacacgcctaatccgaagagtgt 317  Q
    |||||||| ||||| |||||||  |||||||||||||||    
T  35994752 caagtgtc-gtgtc-ggacacg--taatccgaagagtgt 35994718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 199 - 294
Target Start/End: Original strand, 55401040 - 55401135
Alignment:
Q  199 acggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    ||||| |||||| || || |||||||| | || |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  55401040 acggacaccggatacgacacggacactgatacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgg 55401135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 221 - 294
Target Start/End: Original strand, 10954939 - 10955012
Alignment:
Q  221 acactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  10954939 acactgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaatcacaagtgtcggtgtcgg 10955012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 199 - 294
Target Start/End: Complemental strand, 8587115 - 8587020
Alignment:
Q  199 acggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    ||||| ||||||||  || |||||||| |||| |||||||| ||| ||||||||||||||||||||||| || |||||||||||||||||||||||    
T  8587115 acggacaccggacatgacacggacactgacacgccgacacatctagtaatttgaaaaaatcacataattaagtgtaattacaagtgtcggtgtcgg 8587020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 3164139 - 3164033
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||||||||||||| |||||||| ||||||||| || |||||| |  |||  ||||||| |||||||||||||||||||||||||||||| ||||  |    
T  3164139 tatgaagcacggatacagacacggacaccggacacgacacggacaatggcacgtcgacacagctaataatttgaaaaaatcacataattcagtgtaagaa 3164040  T
Q  279 caagtgt 285  Q
    |||||||    
T  3164039 caagtgt 3164033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 227 - 293
Target Start/End: Original strand, 34910310 - 34910376
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  34910310 acacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagagtcggtgtcg 34910376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 229 - 317
Target Start/End: Original strand, 7928445 - 7928532
Alignment:
Q  229 acaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgggacacgcctaatccgaagagtgt 317  Q
    ||||||||||  |||||||||||||||||||||||||||||| ||||||| | ||||||||||| |||||||||||||| || ||||||    
T  7928445 acaccgacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcggtgtc-ggacacgcctaatctgaggagtgt 7928532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 234 - 317
Target Start/End: Complemental strand, 21257045 - 21256961
Alignment:
Q  234 gacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg-ggacacgcctaatccgaagagtgt 317  Q
    |||||| ||||||||||||||||||||||||||||||  ||||||||||||||||| ||| |||||| |||||||||| ||||||    
T  21257045 gacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtatcgtggacacacctaatccgaggagtgt 21256961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 220 - 291
Target Start/End: Original strand, 20503451 - 20503522
Alignment:
Q  220 gacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgt 291  Q
    |||||| |||| |||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  20503451 gacactgacacgccgacacaacaaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgt 20503522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 198 - 293
Target Start/End: Complemental strand, 41961745 - 41961650
Alignment:
Q  198 cacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||| ||||||||| || | |||||| |||| ||| |||||||||||||||||||| ||||||| |||| | ||||||||||||||||||||||    
T  41961745 cacggacaccggacacgacacagacactgacacgccgtcacaactaataatttgaaaatatcacattattcggtgtaattacaagtgtcggtgtcg 41961650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 179 - 293
Target Start/End: Complemental strand, 4991081 - 4990967
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||| |||| ||||||||||||| |||| |||| || |||| ||| |||| |||||||  |||||| ||||| ||||| ||||||||||| |||||||    
T  4991081 tatgaaacacgtatacggacacggacaccgaacacgacacggagactgacactccgacaccgctaatagtttgagaaaattacataattcagtgtaatta 4990982  T
Q  279 caagtgtcggtgtcg 293  Q
    |||||||||| ||||    
T  4990981 caagtgtcggcgtcg 4990967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 227 - 293
Target Start/End: Original strand, 14209106 - 14209172
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||    
T  14209106 acacgccgacacaactaataattttaaaaaatcacataattcagtgtaattacaagtgtcagtgtcg 14209172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 227 - 293
Target Start/End: Original strand, 28812508 - 28812574
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||| |||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||    
T  28812508 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 28812574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 221 - 290
Target Start/End: Complemental strand, 4987363 - 4987294
Alignment:
Q  221 acactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtg 290  Q
    ||||| |||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  4987363 acactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtg 4987294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 193 - 294
Target Start/End: Original strand, 8383216 - 8383317
Alignment:
Q  193 acggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    ||||||||||| || |||||| || |||||| | |||| |||||||  |||||||||||| ||||||| ||||||||| ||||||| |||||||||||||    
T  8383216 acggacacggacactggacacgacacggacattgacacgccgacaccgctaataatttgagaaaatcatataattcagtgtaattataagtgtcggtgtc 8383315  T
Q  293 gg 294  Q
    ||    
T  8383316 gg 8383317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 179 - 292
Target Start/End: Complemental strand, 10268600 - 10268487
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||||||||| ||||||| | ||   || ||  ||||||| |||| ||||||||  |||||||||||||||||||||||||| || |||||||    
T  10268600 tatgaagcacggatacgaacacggacatcgattacgacatggacactgacacgccgacacagttaataatttgaaaaaatcacataatttagtgtaatta 10268501  T
Q  279 caagtgtcggtgtc 292  Q
    |||||||| |||||    
T  10268500 caagtgtcagtgtc 10268487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 229 - 294
Target Start/End: Complemental strand, 51206417 - 51206352
Alignment:
Q  229 acaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||| |||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  51206417 acactgacacagctaataatttgaaaaaatcacataattcagtgtaaatacaagtgtcggtgtcgg 51206352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 229 - 293
Target Start/End: Original strand, 1509534 - 1509598
Alignment:
Q  229 acaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||| |||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  1509534 acactgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 1509598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 179 - 293
Target Start/End: Original strand, 14747512 - 14747621
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttg-aaaaaatcacataattcagcgtaatt 277  Q
    ||||||||||||||||||| ||||| |||||||||      |||||| |||| |||||||| ||||||||||| |||||||||||||||| || ||||||    
T  14747512 tatgaagcacggatacggatacggacaccggacac------gacactgacacgccgacacagctaataatttgaaaaaaatcacataatttagtgtaatt 14747605  T
Q  278 acaagtgtcggtgtcg 293  Q
    ||||| ||| ||||||    
T  14747606 acaagggtccgtgtcg 14747621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 179 - 287
Target Start/End: Complemental strand, 24205155 - 24205047
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||||| || |||||||| ||||||||| || |||||||| |||| |||||||   ||||||||||| ||||| ||||||| ||| |||||||    
T  24205155 tatgaagcacggacacagacacggacaccggacacgacacggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaatta 24205056  T
Q  279 caagtgtcg 287  Q
     ||||||||    
T  24205055 taagtgtcg 24205047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 234 - 290
Target Start/End: Original strand, 26508110 - 26508166
Alignment:
Q  234 gacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtg 290  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  26508110 gacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 26508166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 179 - 294
Target Start/End: Original strand, 7171447 - 7171561
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||||||||||||||||||| || ||||||||| || |||| ||| |||  |||||||| ||  ||||||| |||||||| ||||||| | |||||||    
T  7171447 tatgaagcacggatacggacacagacaccggacacgacacggatactgacatgccgacacagcttgtaatttg-aaaaatcatataattcggtgtaatta 7171545  T
Q  279 caagtgtcggtgtcgg 294  Q
    ||||||| ||||||||    
T  7171546 caagtgttggtgtcgg 7171561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 26492291 - 26492204
Alignment:
Q  207 cggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    ||||||| || |||||||| |||| |||||| | |||||||||||||||||||| | ||||||| |||||||||||| ||||||||||    
T  26492291 cggacacgacacggacactgacacgccgacagagctaataatttgaaaaaatcatacaattcagtgtaattacaagtatcggtgtcgg 26492204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 220 - 293
Target Start/End: Original strand, 14829676 - 14829748
Alignment:
Q  220 gacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||| |||| |||||||| ||||||||||||||| |||||||||||||  ||||||||||||||||||||||    
T  14829676 gacactgacacgccgacacagctaataatttgaaaa-atcacataattcatggtaattacaagtgtcggtgtcg 14829748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 232 - 293
Target Start/End: Complemental strand, 49651847 - 49651786
Alignment:
Q  232 ccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||||  |||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  49651847 ccgacacggctaataatttgaaaaaatcacataattcactgtaattacaagtgtcggtgtcg 49651786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 209 - 293
Target Start/End: Original strand, 14216867 - 14216951
Alignment:
Q  209 gacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||| || |||||||| ||||  |||||||||||||||||| |||| |||| ||||||||| ||||||||||||||| ||||||    
T  14216867 gacacgacacggacactgacacgtcgacacaactaataattttaaaatatcatataattcagtgtaattacaagtgtccgtgtcg 14216951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 209 - 293
Target Start/End: Original strand, 14222996 - 14223080
Alignment:
Q  209 gacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||| || |||||||| ||||  |||||||||||||||||| |||| |||| ||||||||| ||||||||||||||| ||||||    
T  14222996 gacacgacacggacactgacacgtcgacacaactaataattttaaaatatcatataattcagtgtaattacaagtgtccgtgtcg 14223080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 219 - 294
Target Start/End: Original strand, 25775493 - 25775569
Alignment:
Q  219 ggacactaacacaccgacacaactaataatttgaaaa-aatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    ||||||| |||| || |||||  |||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  25775493 ggacactgacacgccaacacatttaataatttgaaaataatcacataattcagtgtaattacaagtgtcggtgtcgg 25775569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 179 - 287
Target Start/End: Complemental strand, 34307894 - 34307786
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||| ||||||||||||| | ||||||||  || | ||||| ||||| | |||||  |||||||||||| ||||||||||| ||||| |||||||    
T  34307894 tatgaagcatggatacggacacgaacaccggacatgacacagacacgaacacgctgacaccgctaataatttgagaaaatcacatatttcagtgtaatta 34307795  T
Q  279 caagtgtcg 287  Q
     ||||||||    
T  34307794 taagtgtcg 34307786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 179 - 294
Target Start/End: Original strand, 25093447 - 25093562
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||| ||||||||  |||| || ||||||||| || | ||||||||||| |||||||   |||| |||||| ||||||||| ||||||| |||||||    
T  25093447 tatgaagtacggatacaaacacagacaccggacacgacactgacactaacacgccgacactgttaatgatttgagaaaatcacacaattcagtgtaatta 25093546  T
Q  279 caagtgtcggtgtcgg 294  Q
     | |||||||||||||    
T  25093547 tatgtgtcggtgtcgg 25093562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 179 - 293
Target Start/End: Original strand, 11665889 - 11666003
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||| ||| ||| || || ||||||||| || |  |||||||||||||||||   |||||||||||| ||||||||| |||| || |||||||    
T  11665889 tatgaagcacgaatatggatacagacaccggacacgacacacacactaacacaccgacaacgctaataatttgataaaatcacacaatttagtgtaatta 11665988  T
Q  279 caagtgtcggtgtcg 293  Q
     | ||||||||||||    
T  11665989 tatgtgtcggtgtcg 11666003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 227 - 293
Target Start/End: Complemental strand, 34185189 - 34185123
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||| |||||||  |||||||||| ||||||||||| ||||||| ||||||||||||||||||||||    
T  34185189 acacgccgacacggctaataatttcaaaaaatcacacaattcagtgtaattacaagtgtcggtgtcg 34185123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 232 - 293
Target Start/End: Original strand, 27505244 - 27505305
Alignment:
Q  232 ccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||||| ||||||||||  ||||||||||||||| || ||||||||||||||||||||||    
T  27505244 ccgacacagctaataatttttaaaaatcacataattaagtgtaattacaagtgtcggtgtcg 27505305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 219 - 291
Target Start/End: Complemental strand, 17005693 - 17005621
Alignment:
Q  219 ggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgt 291  Q
    ||||||| || |||| |||| ||||||||||||| ||||||| ||||||||| ||||||| ||||||||||||    
T  17005693 ggacactgactcaccaacaccactaataatttgataaaatcatataattcagtgtaattataagtgtcggtgt 17005621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 241 - 293
Target Start/End: Complemental strand, 25948939 - 25948887
Alignment:
Q  241 ctaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||||||||||||||||||||||||||| ||||||| |||||| |||||||    
T  25948939 ctaataatttgaaaaaatcacataattcagtgtaattataagtgttggtgtcg 25948887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 179 - 295
Target Start/End: Complemental strand, 10318154 - 10318033
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacac------taacacaccgacacaactaataatttgaaaaaatcacataattcagcg 272  Q
    ||||||||||||||||| ||||||| ||||||||| || |||||||      | |||| |||||||| |||||||||||||||| ||||||  || || |    
T  10318154 tatgaagcacggatacgaacacggacaccggacacgacacggacacggacactgacacgccgacacagctaataatttgaaaaagtcacat-ttttagtg 10318056  T
Q  273 taattacaagtgtcggtgtcggg 295  Q
    ||| || ||||||||||||||||    
T  10318055 taaatataagtgtcggtgtcggg 10318033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 179 - 293
Target Start/End: Original strand, 39756187 - 39756295
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||||||| ||| ||||| | |||||||      |||||| |||| |||||| || ||||||||| |||||||||||||||| |   ||||||    
T  39756187 tatgaagcacggatatggatacggacatcggacac------gacactgacacgccgacaaaattaataatttaaaaaaatcacataatttaatataatta 39756280  T
Q  279 caagtgtcggtgtcg 293  Q
    |||||||||||||||    
T  39756281 caagtgtcggtgtcg 39756295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 227 - 293
Target Start/End: Original strand, 14832092 - 14832158
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||| |||| ||| ||||||||||||||||||||||||| |||  ||||||||||||||| ||||||    
T  14832092 acacgccgatacagctaataatttgaaaaaatcacataactcaatgtaattacaagtgtcagtgtcg 14832158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 8593136 - 8593197
Alignment:
Q  234 gacacaactaataatttg-aaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||| ||| ||||||| |||||||||||||||||||  ||||||||||||||||||||||    
T  8593136 gacacagctactaatttggaaaaaatcacataattcagtataattacaagtgtcggtgtcgg 8593197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 232 - 277
Target Start/End: Original strand, 14979179 - 14979224
Alignment:
Q  232 ccgacacaactaataatttgaaaaaatcacataattcagcgtaatt 277  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||    
T  14979179 ccgacacagctaataatttgaaaaaatcacataattcagtgtaatt 14979224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 40052318 - 40052367
Alignment:
Q  220 gacactaacacaccgacacaactaataatttgaaaaaatcacataattca 269  Q
    |||||| |||| |||||||| |||||||||||||||||||||||||||||    
T  40052318 gacactgacacgccgacacagctaataatttgaaaaaatcacataattca 40052367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 207 - 267
Target Start/End: Complemental strand, 2620139 - 2620079
Alignment:
Q  207 cggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataatt 267  Q
    ||||||| ||||||||||| |||| ||||||| |||||| |||||| ||||||||||||||    
T  2620139 cggacacgactcggacactgacacgccgacaccactaatcatttgagaaaatcacataatt 2620079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 294
Target Start/End: Original strand, 18426933 - 18427009
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||||  |||| ||||||| ||||||||||| ||||||||||||||||| | ||||||| |  ||||||||||||    
T  18426933 cggacacggacacgccgacaccactaataatttcaaaaaatcacataattcggtgtaattatatatgtcggtgtcgg 18427009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 227 - 287
Target Start/End: Original strand, 29508437 - 29508497
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcg 287  Q
    ||||||||| || ||||||||||||||||||||| ||||||||| ||||||| | ||||||    
T  29508437 acacaccgataccactaataatttgaaaaaatcatataattcagtgtaattatatgtgtcg 29508497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 295
Target Start/End: Original strand, 38731163 - 38731279
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||||||||||| |||||||||| | ||||||| ||  | ||||  |||   ||| ||  |||||||||| ||||||||||||||||||| ||| |||    
T  38731163 tatgaagcacggatgcggacacggacaacggacacgacatgtacaccgacatgtcgataccgctaataattttaaaaaatcacataattcagtgtagtta 38731262  T
Q  279 caagtgtcggtgtcggg 295  Q
     | ||||||||||||||    
T  38731263 tatgtgtcggtgtcggg 38731279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 227 - 294
Target Start/End: Complemental strand, 8789616 - 8789549
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    ||||||||||||  || ||||||||| ||||||||||||||| | ||||||| | |||||||||||||    
T  8789616 acacaccgacacggcttataatttgagaaaatcacataattccgtgtaattatatgtgtcggtgtcgg 8789549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 232 - 291
Target Start/End: Original strand, 55212961 - 55213020
Alignment:
Q  232 ccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgt 291  Q
    ||||||||  ||||||||| |||||||||||||||| || | ||||||||||||||||||    
T  55212961 ccgacacagttaataattttaaaaaatcacataatttagtgcaattacaagtgtcggtgt 55213020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 292
Target Start/End: Original strand, 3610578 - 3610691
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||| ||||   |||| | ||||||||| || | |||||| |||| || |||||  ||||||||| ||||||| |||||| |||| |||||||    
T  3610578 tatgaagcacgaatacatccacgaacaccggacacgacacagacactgacacgccaacacagttaataatttaaaaaaataacataactcagtgtaatta 3610677  T
Q  279 caagtgtcggtgtc 292  Q
    | ||||||| ||||    
T  3610678 ccagtgtcgttgtc 3610691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 293
Target Start/End: Original strand, 9800014 - 9800099
Alignment:
Q  208 ggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||| || || ||||| |||| |||||||  |||||||||||| ||||| ||||||||| | ||||||  ||||||||||||||    
T  9800014 ggacacgacacgtacactgacacgccgacacctctaataatttgagaaaattacataattccgtgtaattgtaagtgtcggtgtcg 9800099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 241 - 286
Target Start/End: Original strand, 11610528 - 11610573
Alignment:
Q  241 ctaataatttgaaaaaatcacataattcagcgtaattacaagtgtc 286  Q
    |||||||||| ||||||||||||||||||| ||| |||||||||||    
T  11610528 ctaataatttaaaaaaatcacataattcagtgtagttacaagtgtc 11610573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 14027960 - 14028005
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacac 224  Q
    ||||||||||||||||||||||||| ||||||||| || |||||||    
T  14027960 tatgaagcacggatacggacacggacaccggacacgacacggacac 14028005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 17568786 - 17568749
Alignment:
Q  177 catatgaagcacggatacggacacggataccggacaca 214  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  17568786 catatgaagcacggatacggacacggacaccggacaca 17568749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 218 - 270
Target Start/End: Complemental strand, 8413020 - 8412968
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcag 270  Q
    |||||| | ||| |||||||||||||||||||||| |||| ||||||||||||    
T  8413020 cggacattgacagaccgacacaactaataatttgagaaaaacacataattcag 8412968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 225 - 293
Target Start/End: Complemental strand, 15314944 - 15314876
Alignment:
Q  225 taacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||| || ||||||| || ||||||||||||||||||||||| || ||||||| | |||| |||||||    
T  15314944 taacaaactgacacaattattaatttgaaaaaatcacataatttagtgtaattatatgtgttggtgtcg 15314876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 241 - 305
Target Start/End: Complemental strand, 49505206 - 49505143
Alignment:
Q  241 ctaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgggacacgcctaa 305  Q
    |||||||||||| |||||||||||||| || ||||||| | ||||| ||||| ||||||||||||    
T  49505206 ctaataatttgagaaaatcacataatttagtgtaattatatgtgtcagtgtc-ggacacgcctaa 49505143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 278
Target Start/End: Original strand, 12704000 - 12704051
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||| ||||||| ||||||||||||| |||| |||||||||||| |||||||    
T  12704000 acacgccgacaccactaataatttgagaaaagcacataattcagtgtaatta 12704051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 292
Target Start/End: Complemental strand, 22774130 - 22774071
Alignment:
Q  233 cgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    |||||| |||||||||| || ||| ||||||| ||||| ||||||| |||||||||||||    
T  22774130 cgacaccactaataattagacaaagtcacatatttcagtgtaattataagtgtcggtgtc 22774071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 294
Target Start/End: Original strand, 35222931 - 35222998
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||| ||||||||||||| | ||| | ||||||||||||||||  ||||||| | |||||||||||||    
T  35222931 acacgccgacacaactaacatttttagaaaatcacataattcaatgtaattatatgtgtcggtgtcgg 35222998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 250 - 292
Target Start/End: Original strand, 3865690 - 3865732
Alignment:
Q  250 tgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    ||||||| |||||||||||||  ||||||||||||||||||||    
T  3865690 tgaaaaactcacataattcagtataattacaagtgtcggtgtc 3865732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 218 - 294
Target Start/End: Complemental strand, 32400780 - 32400707
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||||| ||||  ||||||| ||||||||||||||| || ||||||||    ||||||||||||||| |||||||    
T  32400780 cggacactgacacggcgacacagctaataatttgaaaagattacataatt---tgtaattacaagtgtccgtgtcgg 32400707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 220 - 294
Target Start/End: Original strand, 33359747 - 33359821
Alignment:
Q  220 gacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||| |||| | |||||| |||||||||||||||  ||||||| || || |||| |||||||||| |||||||    
T  33359747 gacactgacacgctgacacagctaataatttgaaaaggtcacatattttagtgtaaatacaagtgtcagtgtcgg 33359821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 40993376 - 40993334
Alignment:
Q  252 aaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    ||||||||||||||||||| ||||||| | |||||||||||||    
T  40993376 aaaaaatcacataattcagtgtaattatatgtgtcggtgtcgg 40993334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 3865631 - 3865586
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacat 263  Q
    |||||||| |||| |||||||| ||||||||||||||||| |||||    
T  3865631 cggacactgacacgccgacacagctaataatttgaaaaaaccacat 3865586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 241 - 278
Target Start/End: Original strand, 11251985 - 11252022
Alignment:
Q  241 ctaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  11251985 ctaataatttgagaaaatcacataattcagtgtaatta 11252022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 229 - 278
Target Start/End: Complemental strand, 11313864 - 11313815
Alignment:
Q  229 acaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||  |||||||||||| |||||||||||||| || |||||||    
T  11313864 acaccgacactgctaataatttgagaaaatcacataatttagtgtaatta 11313815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 11493421 - 11493376
Alignment:
Q  233 cgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||| ||||||||| ||| ||||||||||||||||| |||||||    
T  11493421 cgacaccactaataatgtgagaaaatcacataattcagtgtaatta 11493376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 278
Target Start/End: Original strand, 25064880 - 25064953
Alignment:
Q  205 accggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||| || | |||| | |||| |||||||  ||||| ||||||||||||||||||||| || |||||||    
T  25064880 accggacacgacacagacattgacacgccgacaccgctaatgatttgaaaaaatcacataatttagtgtaatta 25064953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 292
Target Start/End: Complemental strand, 32429474 - 32429381
Alignment:
Q  199 acggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    ||||| |||||||||||| || ||| | |||| ||||||   |||||||||| | ||||||||||||||||| | ||||| || | ||||||||    
T  32429474 acggacaccggacacaacacgaacattgacactccgacaacgctaataatttaagaaaatcacataattcagtgcaattataaatatcggtgtc 32429381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 179 - 294
Target Start/End: Original strand, 8743 - 8858
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||| ||||||||||||||| ||||||||| || |||||||| |||| |||||||| |||||||||||||||||||| || ||| || |||||||    
T  8743 tatgaagcatggatacggacacggacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcatattatttagtgtaatta 8842  T
Q  279 caagtgtcggtgtcgg 294  Q
    ||||||||||||||||    
T  8843 caagtgtcggtgtcgg 8858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 2e-32; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 199 - 317
Target Start/End: Complemental strand, 19536492 - 19536374
Alignment:
Q  199 acggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaa-tcacataattcagcgtaattacaagtgtcggtgtcgggac 297  Q
    ||||| ||||||||| || |||||| | |||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||    
T  19536492 acggacaccggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtc-ggac 19536394  T
Q  298 acgcctaatccgaagagtgt 317  Q
    ||||||||||||| ||||||    
T  19536393 acgcctaatccgaggagtgt 19536374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 179 - 293
Target Start/End: Original strand, 30335362 - 30335476
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||||||||||||||||||  | ||||| || ||||||||| ||| ||||||||||||||||||||||||||| |||||||| || |||||||    
T  30335362 tatgaagcacggatacggacacggatctcagacacgacacggacactagcacgccgacacaactaataatttgaaaaaatgacataatttagtgtaatta 30335461  T
Q  279 caagtgtcggtgtcg 293  Q
    ||| |||||||||||    
T  30335462 caaatgtcggtgtcg 30335476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 179 - 286
Target Start/End: Complemental strand, 21374808 - 21374706
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||||||||||||||||| |||||||||     |||||||||||| |||||||| |||||||||||||||||| ||||||||||| |||||||    
T  21374808 tatgaagcacggatacggacacggacaccggacac-----ggacactaacacgccgacacagctaataatttgaaaaaattacataattcagtgtaatta 21374714  T
Q  279 caagtgtc 286  Q
    ||||||||    
T  21374713 caagtgtc 21374706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 186 - 293
Target Start/End: Original strand, 15657816 - 15657923
Alignment:
Q  186 cacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgt 285  Q
    |||||| || |||||||  ||||||||| || ||||||||||||| ||||| |||||||||||||| |||||||||||||||||| |||||||||| |||    
T  15657816 cacggacaccgacacggtcaccggacacgacacggacactaacacgccgactcaactaataatttgtaaaaatcacataattcagtgtaattacaaatgt 15657915  T
Q  286 cggtgtcg 293  Q
    ||||||||    
T  15657916 cggtgtcg 15657923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 180 - 293
Target Start/End: Complemental strand, 23058556 - 23058442
Alignment:
Q  180 atgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaa-aaaatcacataattcagcgtaatta 278  Q
    |||||||||||| ||||||||||||||| ||||| || |||||| | |||| || |||||| |||||||||||| ||||||||||||| ||| |||||||    
T  23058556 atgaagcacggacacggacacggatacctgacacgacacggacagtgacacgcccacacaattaataatttgaaaaaaatcacataatccagtgtaatta 23058457  T
Q  279 caagtgtcggtgtcg 293  Q
    |||||||||||||||    
T  23058456 caagtgtcggtgtcg 23058442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 179 - 294
Target Start/End: Complemental strand, 2438830 - 2438718
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||||||||||||||| | |||||||| ||| |||||||| || |   |||||| |||||||||| ||||||||||||||||||| |||||||    
T  2438830 tatgaagcacggatacggacacg-acaccggacaaaacacggacactgacgct--gacacagctaataatttcaaaaaatcacataattcagtgtaatta 2438734  T
Q  279 caagtgtcggtgtcgg 294  Q
    ||||||||||||||||    
T  2438733 caagtgtcggtgtcgg 2438718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 193 - 336
Target Start/End: Complemental strand, 20539774 - 20539624
Alignment:
Q  193 acggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgt- 291  Q
    ||||| ||||| || |||||| || |||||||| ||||  ||||||| |||||||||||||||||||| |||||| || ||||||||||||||||||||     
T  20539774 acggatacggacactggacacgacacggacactgacacgtcgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtc 20539675  T
Q  292 ----cgggacacgcctaatccgaagagtgt--gtgctccataggtcacaac 336  Q
        || ||||||||| |||||| ||||||  ||||| |||||||||||||    
T  20539674 gtggcgagacacgcctgatccgaggagtgtccgtgcttcataggtcacaac 20539624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 179 - 293
Target Start/End: Complemental strand, 34785096 - 34784982
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||||||| ||||||||||||||  || ||||| || |||||||| |||||||||||||||||||  ||| | |||||||||||||| || |||||||    
T  34785096 tatgaagcacagatacggacacggaccccagacacgacacggacactgacacaccgacacaactaatttttttagaaaatcacataatttagtgtaatta 34784997  T
Q  279 caagtgtcggtgtcg 293  Q
     | ||||||||||||    
T  34784996 tatgtgtcggtgtcg 34784982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 218 - 294
Target Start/End: Original strand, 15972857 - 15972933
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||||| |||| ||||||||| ||||||||||||||||| ||| ||||||| |||||||||||||||||||||||    
T  15972857 cggacactgacacgccgacacaattaataatttgaaaaaattacacaattcagtgtaattacaagtgtcggtgtcgg 15972933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 218 - 294
Target Start/End: Original strand, 37558961 - 37559037
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||||| |||| |||||||| ||||||||||| |||||||||||||||||  |||||||||||||||||||||||    
T  37558961 cggacactgacacgccgacacagctaataatttgtaaaaatcacataattcaatgtaattacaagtgtcggtgtcgg 37559037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 218 - 293
Target Start/End: Original strand, 18421947 - 18422022
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||||| |||| ||||||||| ||||||||| |||| |||||||||||||| ||||||||||||||||||||||    
T  18421947 cggacactgacacgccgacacaattaataatttaaaaatatcacataattcagtgtaattacaagtgtcggtgtcg 18422022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 218 - 293
Target Start/End: Complemental strand, 30717605 - 30717530
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||||| ||| ||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  30717605 cggacactgacaaaccgacaaagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcg 30717530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 179 - 292
Target Start/End: Original strand, 26769462 - 26769569
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||||||||||||||||| |||||||||      |||||  |||| |||||||||||||||||||||||| ||||||| ||   | |||||||    
T  26769462 tatgaagcacggatacggacacggacaccggacac------gacacagacacgccgacacaactaataatttgaaaatatcacattatctggtgtaatta 26769555  T
Q  279 caagtgtcggtgtc 292  Q
    ||||||||||||||    
T  26769556 caagtgtcggtgtc 26769569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 219 - 292
Target Start/End: Complemental strand, 18841087 - 18841014
Alignment:
Q  219 ggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    ||||||| |||| | ||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||    
T  18841087 ggacactgacacgctgacacaactaataatttgaaaaaattacataattaagtgtaattacaagtgtcggtgtc 18841014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 233 - 293
Target Start/End: Original strand, 974746 - 974806
Alignment:
Q  233 cgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  974746 cgacacaactaataatttgaaaagatcacattattcagtgtaattacaagtgtcggtgtcg 974806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 218 - 294
Target Start/End: Complemental strand, 30404925 - 30404849
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||||| |||| |||||||   ||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  30404925 cggacactgacacgccgacacggttaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggcgtcgg 30404849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 180 - 292
Target Start/End: Complemental strand, 34337289 - 34337182
Alignment:
Q  180 atgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattac 279  Q
    ||||| ||||||||||||||||||||||| | || || |||||| | |||| ||||||||  | ||||||||||||||||||||||||     |||||||    
T  34337289 atgaatcacggatacggacacggataccgtatacgacacggacattgacacgccgacacagttgataatttgaaaaaatcacataatt-----taattac 34337195  T
Q  280 aagtgtcggtgtc 292  Q
    |||||||||||||    
T  34337194 aagtgtcggtgtc 34337182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 179 - 266
Target Start/End: Original strand, 31283993 - 31284080
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataat 266  Q
    |||||||||| |||||||||||||| |||||||| ||| || ||||| |||| |||||||  |||||||||||| |||||||||||||    
T  31283993 tatgaagcacagatacggacacggacaccggacataacacgtacacttacacgccgacactgctaataatttgagaaaatcacataat 31284080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 190 - 293
Target Start/End: Complemental strand, 36756447 - 36756344
Alignment:
Q  190 gatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggt 289  Q
    |||||||||||| | | |||| || || | |||||| ||||  ||||||||||||||||||||| |||| ||||||||||| ||||||| ||||||||||    
T  36756447 gatacggacacgaacatcggatacgacacagacactgacacgtcgacacaactaataatttgaagaaataacataattcagtgtaattataagtgtcggt 36756348  T
Q  290 gtcg 293  Q
    ||||    
T  36756347 gtcg 36756344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 227 - 293
Target Start/End: Complemental strand, 12668489 - 12668423
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||| |||||| |||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||    
T  12668489 acacgccgacataactaataatttgaaaaaatgacataattcagtgtaattataagtgtcggtgtcg 12668423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 180 - 278
Target Start/End: Original strand, 21616708 - 21616806
Alignment:
Q  180 atgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||||||||||||| || ||  ||||| || |||||||  |||| |||||||  |||||||||||| ||||||||||||||||| |||||||    
T  21616708 atgaagcacggatacggacacagacacatgacacgacacggacacggacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaatta 21616806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 220 - 294
Target Start/End: Complemental strand, 38117232 - 38117158
Alignment:
Q  220 gacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||| |||| |||||||| |||||||||||||||||||||||| ||| | |||||||||||||| ||||||||    
T  38117232 gacactgacacgccgacacagctaataatttgaaaaaatcacatacttcggtgtaattacaagtgttggtgtcgg 38117158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 241 - 317
Target Start/End: Complemental strand, 34691857 - 34691782
Alignment:
Q  241 ctaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgggacacgcctaatccgaagagtgt 317  Q
    |||||||||||| ||||||| ||||||||| ||||||| | ||||||||||| ||||||||||||||||| ||||||    
T  34691857 ctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtc-ggacacgcctaatccgaggagtgt 34691782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 241 - 317
Target Start/End: Complemental strand, 34714269 - 34714194
Alignment:
Q  241 ctaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgggacacgcctaatccgaagagtgt 317  Q
    |||||||||||| ||||||| ||||||||| ||||||| | ||||||||||| ||||||||||||||||| ||||||    
T  34714269 ctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtc-ggacacgcctaatccgaggagtgt 34714194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 179 - 278
Target Start/End: Original strand, 28412295 - 28412394
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||| ||| ||||||||| ||| ||||| || |||||||||||||  | ||||   ||||||||||| ||||||||||||||||| |||||||    
T  28412295 tatgaagcacgaatatggacacggacaccagacacgacacggacactaacacgtcaacaccgttaataatttgataaaatcacataattcagtgtaatta 28412394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 11223922 - 11223864
Alignment:
Q  234 gacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    |||||| |||||| ||||||||||| ||||||||||| |||||||||||||||||||||    
T  11223922 gacacagctaatattttgaaaaaataacataattcagtgtaattacaagtgtcggtgtc 11223864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 12941019 - 12940941
Alignment:
Q  209 gacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcg 287  Q
    ||||| || |||||||| ||||   ||||||||||||||||||||||||||| ||||||||| |||||||||| |||||    
T  12941019 gacacgacacggacactgacacgttgacacaactaataatttgaaaaaatcatataattcagtgtaattacaaatgtcg 12940941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 227 - 317
Target Start/End: Complemental strand, 18256046 - 18255957
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgggacacgcctaatccgaagagtgt 317  Q
    |||||| ||||||  ||||||||| |||||||||||||||| |  ||||||| ||||||||||||| ||||||||||||||| | ||||||    
T  18256046 acacactgacacagataataatttaaaaaaatcacataatttaatgtaattagaagtgtcggtgtc-ggacacgcctaatccaaggagtgt 18255957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 178 - 292
Target Start/End: Original strand, 18276465 - 18276579
Alignment:
Q  178 atatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatt 277  Q
    ||||||||||||||||| |||||||| ||||||||| |  | |||||| | |  |||||||  |||||||||||| |||||||| |||||||| ||||||    
T  18276465 atatgaagcacggatacagacacggacaccggacacgatacagacactgatatgccgacaccgctaataatttgagaaaatcacttaattcagtgtaatt 18276564  T
Q  278 acaagtgtcggtgtc 292  Q
    |   |||||||||||    
T  18276565 atgtgtgtcggtgtc 18276579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 232 - 294
Target Start/End: Original strand, 20473320 - 20473382
Alignment:
Q  232 ccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    ||||||||||||||||||| ||||| ||| ||||||||| |||||||||||||||| ||||||    
T  20473320 ccgacacaactaataatttaaaaaactcatataattcagtgtaattacaagtgtcgatgtcgg 20473382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 207 - 292
Target Start/End: Original strand, 21091696 - 21091781
Alignment:
Q  207 cggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    |||||||||  |||||||| ||||||||||||  |||||||||| | ||||| ||||| ||||| ||||||||||||||| |||||    
T  21091696 cggacacaagacggacactgacacaccgacaccgctaataatttaagaaaataacatacttcagtgtaattacaagtgtcagtgtc 21091781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 194 - 294
Target Start/End: Original strand, 21624226 - 21624327
Alignment:
Q  194 cggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatca-cataattcagcgtaattacaagtgtcggtgtc 292  Q
    |||| ||||| |||| |||| || | |||||| |||| |||||||| |||||||||| ||||||  | |||||||||| |||||||||||||||||||||    
T  21624226 cggatacggacaccgaacacgacacagacactgacacgccgacacagctaataattttaaaaaaatagcataattcagtgtaattacaagtgtcggtgtc 21624325  T
Q  293 gg 294  Q
    ||    
T  21624326 gg 21624327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 218 - 290
Target Start/End: Original strand, 23718010 - 23718082
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtg 290  Q
    |||||||| ||||||||||||  |||||||||||| ||| ||||||||||||| ||||||| | |||||||||    
T  23718010 cggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggtg 23718082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 218 - 290
Target Start/End: Original strand, 24105682 - 24105754
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtg 290  Q
    |||||||| ||||||||||||  |||||||||||| ||| ||||||||||||| ||||||| | |||||||||    
T  24105682 cggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggtg 24105754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 6940239 - 6940310
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggt 289  Q
    |||||||| |||| |||||||| |||||||||| ||||| | |||||||| || ||||||||||||||||||    
T  6940239 cggacactgacacgccgacacagctaataattttaaaaagttacataattaagtgtaattacaagtgtcggt 6940310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 218 - 292
Target Start/End: Complemental strand, 14996299 - 14996224
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaa-tcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    |||||||| |||  |||||||| ||||||||||||||||| ||| |||||| || |||||||||||||||||||||    
T  14996299 cggacactgacaagccgacacagctaataatttgaaaaaaatcatataatttagtgtaattacaagtgtcggtgtc 14996224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 219 - 294
Target Start/End: Complemental strand, 20242801 - 20242726
Alignment:
Q  219 ggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    ||||||| |||| ||||||||||||||  ||| | ||||||||||||||||| ||||||| | |||||||||||||    
T  20242801 ggacactgacacgccgacacaactaatttttttagaaaatcacataattcagtgtaattatatgtgtcggtgtcgg 20242726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 218 - 285
Target Start/End: Original strand, 24894373 - 24894440
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgt 285  Q
    |||||||| |||| |||||||| |||||||||| ||||||||||||||||||| | ||||| ||||||    
T  24894373 cggacactgacacgccgacacagctaataatttaaaaaaatcacataattcagtgcaattaaaagtgt 24894440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 218 - 293
Target Start/End: Original strand, 37419727 - 37419802
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||||| |||| ||||||   | |||||||||||||||||||| ||||||| ||||||||||||| ||||||||    
T  37419727 cggacactgacacgccgacatggcaaataatttgaaaaaatcacaaaattcagtgtaattacaagtgccggtgtcg 37419802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 227 - 293
Target Start/End: Original strand, 33153417 - 33153483
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||| |||| ||| ||||| |||| ||||||||||||||||||| ||||||||||||||| ||||||    
T  33153417 acacgccgaaacatctaatgatttaaaaaaatcacataattcagtgtaattacaagtgtccgtgtcg 33153483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 232 - 294
Target Start/End: Original strand, 5040730 - 5040794
Alignment:
Q  232 ccgacacaactaataatttgaaaa--aatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||| ||| |||||||||||||||  ||||||||||||||  |||||||||||||||||||||||    
T  5040730 ccgatacagctaataatttgaaaaaaaatcacataattcaatgtaattacaagtgtcggtgtcgg 5040794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 232 - 315
Target Start/End: Complemental strand, 34221558 - 34221478
Alignment:
Q  232 ccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgggacacgcctaatccgaagagt 315  Q
    |||||||| |||||||||||||||||  |||||||||   | |||||||||||||||   ||||||||||||||||||| ||||    
T  34221558 ccgacacagctaataatttgaaaaaaatacataattctatgcaattacaagtgtcgg---cgggacacgcctaatccgaggagt 34221478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 227 - 292
Target Start/End: Complemental strand, 42832342 - 42832277
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    ||||||||||||  |||||||||||| ||||| ||||| ||||| ||||||| |||||||||||||    
T  42832342 acacaccgacaccgctaataatttgagaaaattacatatttcagtgtaattataagtgtcggtgtc 42832277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 220 - 291
Target Start/End: Original strand, 31808063 - 31808134
Alignment:
Q  220 gacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgt 291  Q
    |||||| ||||||||||||  |||||||||| | ||||||||||||||||| ||||||| | ||||| ||||    
T  31808063 gacactgacacaccgacaccgctaataatttaacaaaatcacataattcagtgtaattatatgtgtcagtgt 31808134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 240 - 294
Target Start/End: Original strand, 5367198 - 5367252
Alignment:
Q  240 actaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||||||||||  |||||||||||||||| ||||||| | |||||||||||||    
T  5367198 actaataatttgaggaaatcacataattcagtgtaattatatgtgtcggtgtcgg 5367252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 28677907 - 28677953
Alignment:
Q  232 ccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||||  |||||||||||||||||||||||||||||| |||||||    
T  28677907 ccgacaccgctaataatttgaaaaaatcacataattcagtgtaatta 28677953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 221 - 278
Target Start/End: Complemental strand, 21782890 - 21782833
Alignment:
Q  221 acactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||| |||| |||||||  |||||||||||| ||||||||||||||||| |||||||    
T  21782890 acactgacacgccgacactgctaataatttgagaaaatcacataattcagtgtaatta 21782833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 236 - 293
Target Start/End: Original strand, 38442309 - 38442366
Alignment:
Q  236 cacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||||||| |||| ||||||||||||||||||   |||||| ||||||||||||||    
T  38442309 cacaactaatgatttaaaaaaatcacataattcaatataattataagtgtcggtgtcg 38442366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 241 - 286
Target Start/End: Original strand, 39323271 - 39323316
Alignment:
Q  241 ctaataatttgaaaaaatcacataattcagcgtaattacaagtgtc 286  Q
    |||||||||||| ||||| ||||||||||| |||||||||||||||    
T  39323271 ctaataatttgacaaaattacataattcagtgtaattacaagtgtc 39323316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 293
Target Start/End: Original strand, 44860273 - 44860379
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||||||||||| ||| | ||| ||||| || ||||||||        |||||  |||||||||||| |||||| |||||||||| |||||||    
T  44860273 tatgaagcacggatacggatacgtacaccagacacgacacggacact--------gacaccgctaataatttgagaaaatcgcataattcagtgtaatta 44860364  T
Q  279 caagtgtcggtgtcg 293  Q
     | ||||||||||||    
T  44860365 tatgtgtcggtgtcg 44860379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 241 - 293
Target Start/End: Complemental strand, 4882748 - 4882696
Alignment:
Q  241 ctaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||| |||||||||||| | ||||||||| |||||||||||||||| |||||    
T  4882748 ctaattatttgaaaaaatgatataattcagtgtaattacaagtgtcgatgtcg 4882696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 230
Target Start/End: Complemental strand, 18631513 - 18631462
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacac 230  Q
    |||||||||| |||||| ||||||| ||||||||| || |||||||||||||    
T  18631513 tatgaagcacagatacgaacacggacaccggacacgacacggacactaacac 18631462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 291
Target Start/End: Complemental strand, 29176566 - 29176495
Alignment:
Q  220 gacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgt 291  Q
    |||||| |||| | ||||||  ||||||||||||||  ||||||||||||| ||||||| |||||| |||||    
T  29176566 gacacttacacgcagacacagttaataatttgaaaaggtcacataattcagtgtaattataagtgttggtgt 29176495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 241 - 291
Target Start/End: Complemental strand, 18420486 - 18420436
Alignment:
Q  241 ctaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgt 291  Q
    |||||||||||| ||||||||||||||||  | ||||| ||||||||||||    
T  18420486 ctaataatttgagaaaatcacataattcaatgcaattataagtgtcggtgt 18420436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 256 - 294
Target Start/End: Original strand, 44635520 - 44635558
Alignment:
Q  256 aatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||| |||||||| |||||||||||||||||||||||    
T  44635520 aatcacgtaattcagtgtaattacaagtgtcggtgtcgg 44635558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 5473331 - 5473388
Alignment:
Q  237 acaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||| ||||||||||||||||||||||||||| | |||||   | |||||||||||||    
T  5473331 acaaataataatttgaaaaaatcacataattcggtgtaatattatgtgtcggtgtcgg 5473388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 18622612 - 18622665
Alignment:
Q  240 actaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||||||||| | ||||||||||||||||| ||||||| | |||| |||||||    
T  18622612 actaataatttaataaaatcacataattcagtgtaattatacgtgttggtgtcg 18622665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 27447115 - 27447082
Alignment:
Q  179 tatgaagcacggatacggacacggataccggaca 212  Q
    ||||||||||||||||||||||||| ||||||||    
T  27447115 tatgaagcacggatacggacacggacaccggaca 27447082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 270
Target Start/End: Original strand, 27459991 - 27460063
Alignment:
Q  198 cacggataccggacacaactcggacactaacacaccgacacaactaataatttg-aaaaaatcacataattcag 270  Q
    |||||| || |||||||| | ||||||| |||| |||||||| ||||||||||| ||||||| |||||||||||    
T  27459991 cacggacacaggacacaa-taggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcag 27460063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 232 - 293
Target Start/End: Complemental strand, 37411305 - 37411244
Alignment:
Q  232 ccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||||  |||||||||||| ||||||||||||||||| || |||| | |||||| |||||    
T  37411305 ccgacaccgctaataatttgagaaaatcacataattcagtgtgattatatgtgtcgatgtcg 37411244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 242 - 291
Target Start/End: Complemental strand, 44605190 - 44605141
Alignment:
Q  242 taataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgt 291  Q
    ||||||||||| ||||| ||||||||||  ||||||||| ||||||||||    
T  44605190 taataatttgagaaaataacataattcaatgtaattacatgtgtcggtgt 44605141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 9e-32; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 179 - 293
Target Start/End: Original strand, 22651921 - 22652035
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||| |||||||||||||| || ||||||||| || |||||||| |||| |||||||| |||||||||||||||||||||||||||||   ||||||    
T  22651921 tatgaagtacggatacggacactgacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatataatta 22652020  T
Q  279 caagtgtcggtgtcg 293  Q
    |||||||||||||||    
T  22652021 caagtgtcggtgtcg 22652035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 179 - 291
Target Start/End: Complemental strand, 29510418 - 29510306
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||||||||||||| |||| ||| ||||||||| || |||||||| |||| |||||||| |||||||||||||||||||||| |||||||  ||||||    
T  29510418 tatgaagcacggatactgacatggacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcacaaaattcagtataatta 29510319  T
Q  279 caagtgtcggtgt 291  Q
    |||||||||||||    
T  29510318 caagtgtcggtgt 29510306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 179 - 293
Target Start/End: Complemental strand, 2572170 - 2572056
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||| ||||||||||||||| || |||||| || |||| ||  ||||  ||||||| ||||||||||||||||||||||||||| || |||||||    
T  2572170 tatgaagcatggatacggacacggacactggacacgacacggataccgacacgtcgacacacctaataatttgaaaaaatcacataatttagtgtaatta 2572071  T
Q  279 caagtgtcggtgtcg 293  Q
    |||||||||||||||    
T  2572070 caagtgtcggtgtcg 2572056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 179 - 292
Target Start/End: Complemental strand, 22197856 - 22197743
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||||||   |||||||| ||||||||| || | ||||||||||| || ||||| |||||||||||||||| |||||||||| || |||||||    
T  22197856 tatgaagcacggatctagacacggacaccggacacgacacagacactaacacgccaacacagctaataatttgaaaaattcacataatttagtgtaatta 22197757  T
Q  279 caagtgtcggtgtc 292  Q
    |||||||| |||||    
T  22197756 caagtgtcagtgtc 22197743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 218 - 294
Target Start/End: Complemental strand, 36450829 - 36450753
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||||| |||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||    
T  36450829 cggacactgacacgccgacacaactaataatttgaaaaaatcacagaattcagtgtaattacaagtgtaggtgtcgg 36450753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 179 - 294
Target Start/End: Complemental strand, 926902 - 926787
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||||||||| ||||||| ||||||||| || |||||||| |||| || ||||  |||||||||||| |||||| |||  ||||| |||||||    
T  926902 tatgaagcacggatacgaacacggacaccggacacgacacggacactgacacgccaacactcctaataatttgagaaaatctcattgttcagtgtaatta 926803  T
Q  279 caagtgtcggtgtcgg 294  Q
     |||||||||||||||    
T  926802 taagtgtcggtgtcgg 926787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 218 - 293
Target Start/End: Complemental strand, 15816204 - 15816129
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||    
T  15816204 cggacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcg 15816129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 193 - 293
Target Start/End: Complemental strand, 13437064 - 13436964
Alignment:
Q  193 acggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    ||||||| ||| ||||||||  ||  ||||||| |||| |||||||| |||||||||||||||||||||||||||||  ||||| |||||||||||||||    
T  13437064 acggacatggacaccggacatgacatggacactgacacgccgacacagctaataatttgaaaaaatcacataattcatggtaataacaagtgtcggtgtc 13436965  T
Q  293 g 293  Q
    |    
T  13436964 g 13436964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 198 - 294
Target Start/End: Complemental strand, 18170577 - 18170481
Alignment:
Q  198 cacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||||||||| ||| || |||||||| |||| ||||||||| ||| ||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  18170577 cacggataccggtcacgacacggacactgacacgccgacacaattaaaaatttgaaaaaattacataattcaatgtaattacaaatgtcggtgtcgg 18170481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 198 - 294
Target Start/End: Complemental strand, 18634145 - 18634049
Alignment:
Q  198 cacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||||||||| ||| || |||||||| |||| ||||||||| ||| ||||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  18634145 cacggataccggtcacgacacggacactgacacgccgacacaattaaaaatttgaaaaaattacataattcaatgtaattacaaatgtcggtgtcgg 18634049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 229 - 293
Target Start/End: Original strand, 25566836 - 25566900
Alignment:
Q  229 acaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25566836 acactgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 25566900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 4948657 - 4948712
Alignment:
Q  239 aactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  4948657 aactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgg 4948712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 20873042 - 20873129
Alignment:
Q  207 cggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    ||||||| || |||||||| |||| |||||| |  |||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  20873042 cggacacgacacggacactgacacgccgacatagataataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgg 20873129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 229 - 293
Target Start/End: Original strand, 8342967 - 8343031
Alignment:
Q  229 acaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||||||| | ||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  8342967 acaccgacatagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 8343031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 222 - 294
Target Start/End: Original strand, 24613509 - 24613580
Alignment:
Q  222 cactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||| ||||||||||||| ||||||||||||||| ||||||||||| || |||||||||||||||||||||||    
T  24613509 cactgacacaccgacacagctaataatttgaaaa-atcacataattaagtgtaattacaagtgtcggtgtcgg 24613580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 229 - 317
Target Start/End: Original strand, 31514867 - 31514960
Alignment:
Q  229 acaccgacacaactaataatttgaaaa-aatcacataattcagcgtaattacaagtgtcggtgtcgg----gacacgcctaatccgaagagtgt 317  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||| ||    |||||||||||||||| ||||||    
T  31514867 acactgacacaactaataatttgaaaaaaatcacataattcagcgtaactacaagtgttggtgttggacacgacacgcctaatccgaggagtgt 31514960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 179 - 292
Target Start/End: Complemental strand, 4298993 - 4298887
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||||||| ||||||||| ||  ||||||     || |||||||| ||||||||  |||||||||||||||||||||||||| |  |||||||    
T  4298993 tatgaagcacggatatggacacggacac--gacaca-----gatactaacacgccgacacagttaataatttgaaaaaatcacataatttaatgtaatta 4298901  T
Q  279 caagtgtcggtgtc 292  Q
    ||||||||||||||    
T  4298900 caagtgtcggtgtc 4298887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 227 - 293
Target Start/End: Original strand, 8343309 - 8343375
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||||||||| | ||||||||||||||||||||||||||| || ||||||||||||||| ||||||    
T  8343309 acacaccgacatagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcagtgtcg 8343375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 179 - 292
Target Start/End: Complemental strand, 4673538 - 4673426
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||| ||||||| ||||| | ||||||| || | |||||| |||| ||||||||  ||||||||||||||||||| | ||||||| |||||||    
T  4673538 tatgaagcacg-atacggatacggacatcggacacgacacagacactgacacgccgacacagataataatttgaaaaaatcataaaattcagtgtaatta 4673440  T
Q  279 caagtgtcggtgtc 292  Q
    ||||| || |||||    
T  4673439 caagtatcagtgtc 4673426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 221 - 294
Target Start/End: Original strand, 22595981 - 22596054
Alignment:
Q  221 acactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    ||||| |||| |||||||| |||||||||| ||||||| ||||||||||| |||||||||||||| ||||||||    
T  22595981 acactgacacgccgacacagctaataatttaaaaaaataacataattcagtgtaattacaagtgttggtgtcgg 22596054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 179 - 294
Target Start/End: Complemental strand, 24413674 - 24413558
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataa-tttgaaaaaatcacataattcagcgtaatt 277  Q
    ||||||||||||||||||||||||| ||| ||||| || |||||||| ||| || |||||   |||||| ||||| ||||  ||||||||||| ||||||    
T  24413674 tatgaagcacggatacggacacggacaccagacacgacacggacactgacatactgacaccgttaataattttgagaaaaatacataattcagggtaatt 24413575  T
Q  278 acaagtgtcggtgtcgg 294  Q
    | ||||||| |||||||    
T  24413574 ataagtgtcagtgtcgg 24413558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 179 - 293
Target Start/End: Original strand, 24857954 - 24858070
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttg---aaaaaatcacataattcagcgtaa 275  Q
    ||||||| ||||||||||||||| | ||||||||| || ||||||   |||| ||||||||  ||||||||||   ||||||||||||||||||| ||||    
T  24857954 tatgaagaacggatacggacacgaacaccggacacgacacggacatggacacgccgacacagttaataatttgaaaaaaaaatcacataattcagtgtaa 24858053  T
Q  276 ttacaagtgtcggtgtcg 293  Q
     ||||||||||| |||||    
T  24858054 -tacaagtgtcgttgtcg 24858070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 233 - 292
Target Start/End: Complemental strand, 29447170 - 29447111
Alignment:
Q  233 cgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    |||||||||||||||||||| ||||||||||||||||  |||| ||||||||||||||||    
T  29447170 cgacacaactaataatttgagaaaatcacataattcaatgtaactacaagtgtcggtgtc 29447111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 218 - 293
Target Start/End: Complemental strand, 30271366 - 30271291
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||||| |||| |||||||| ||||| |||||||||||||||||||| ||| ||||||||||||| | ||||||    
T  30271366 cggacactgacacgccgacacagctaatcatttgaaaaaatcacataatgcagtgtaattacaagtgccagtgtcg 30271291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 186 - 292
Target Start/End: Complemental strand, 28385101 - 28384995
Alignment:
Q  186 cacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgt 285  Q
    |||||||||| |||||||||| | |||| || |||||||| ||| ||||||||   ||||||| |||| ||||| |||||||||| ||||||| | ||||    
T  28385101 cacggatacgaacacggatactgaacacgacacggacactgacataccgacaccgttaataatatgaataaatctcataattcagtgtaattatatgtgt 28385002  T
Q  286 cggtgtc 292  Q
    |||||||    
T  28385001 cggtgtc 28384995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 241 - 294
Target Start/End: Complemental strand, 30077439 - 30077386
Alignment:
Q  241 ctaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||| |||||||    
T  30077439 ctaataatttgaaaacatcacataattcagtgtaattacaagtgtccgtgtcgg 30077386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 243 - 300
Target Start/End: Original strand, 40332200 - 40332256
Alignment:
Q  243 aataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgggacacg 300  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  40332200 aataatttgagaaaatcacataattcagtgtaattacaagtgtcggtgt-gggacacg 40332256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 218 - 294
Target Start/End: Original strand, 5813576 - 5813652
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||||  |||| |||||||| |||||||||||||||| ||||||| || || |||| ||||||||||||||||||    
T  5813576 cggacacggacacgccgacacagctaataatttgaaaaagtcacatattttagtgtaaatacaagtgtcggtgtcgg 5813652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 218 - 290
Target Start/End: Complemental strand, 25192422 - 25192350
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtg 290  Q
    |||||||| |||| |||||||| |||||||||||||||| | |||||||||||  |||||| |||||||||||    
T  25192422 cggacactgacacgccgacacagctaataatttgaaaaagtgacataattcagtataattataagtgtcggtg 25192350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 192 - 292
Target Start/End: Original strand, 31556955 - 31557054
Alignment:
Q  192 tacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgt 291  Q
    |||||| ||||| ||||||||  ||  || |||| |||| ||||||||  |||||||||||||| |||||||||||||| |||||||||||| |||||||    
T  31556955 tacggatacggacaccggacatgacatggtcactgacacgccgacacagttaataatttgaaaa-atcacataattcagtgtaattacaagtttcggtgt 31557053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 179 - 287
Target Start/End: Original strand, 44067461 - 44067569
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||||| || |||||||| ||| ||||| || | |||||| |||| |||||||   ||||||||||| ||||| ||||||| ||| |||||||    
T  44067461 tatgaagcacggacacagacacggacaccagacaccacaccgacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaatta 44067560  T
Q  279 caagtgtcg 287  Q
     ||||||||    
T  44067561 taagtgtcg 44067569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 294
Target Start/End: Complemental strand, 4786445 - 4786337
Alignment:
Q  180 atgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattac 279  Q
    ||||||||||||||| ||||| || |||| ||||      |||||| |||| ||||||| | ||||||||| | ||||||||||||||||| |||||||     
T  4786445 atgaagcacggatacagacactgacaccgaacac------gacactgacacgccgacaccattaataatttaagaaaatcacataattcagtgtaattat 4786352  T
Q  280 aagtgtcggtgtcgg 294  Q
    | |||||||||||||    
T  4786351 atgtgtcggtgtcgg 4786337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 232 - 287
Target Start/End: Original strand, 18407717 - 18407772
Alignment:
Q  232 ccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcg 287  Q
    |||||||| |||||||||  ||||||||||||||||||| ||||||||||||||||    
T  18407717 ccgacacagctaataattcaaaaaaatcacataattcagtgtaattacaagtgtcg 18407772  T

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Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 179 - 278
Target Start/End: Complemental strand, 24362316 - 24362217
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||||||| |||||||| ||||| |||||| || || | |||||  |||| |||||||  |||||||||||| | ||||||||||||||| |||||||    
T  24362316 tatgaagcacagatacggatacggacaccggatacgacacagacaccgacacgccgacaccgctaataatttgagagaatcacataattcagtgtaatta 24362217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 232 - 287
Target Start/End: Complemental strand, 41832001 - 41831946
Alignment:
Q  232 ccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcg 287  Q
    ||||||||  ||||||||||||||||||||||||||||| |||| |||||||||||    
T  41832001 ccgacacagttaataatttgaaaaaatcacataattcagtgtaactacaagtgtcg 41831946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 233 - 293
Target Start/End: Complemental strand, 17468568 - 17468508
Alignment:
Q  233 cgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||||||| ||||||||| |||||||||||||| | | |||||||||||||| |||||||    
T  17468568 cgacacaacaaataatttgtaaaaatcacataatgcggtgtaattacaagtgttggtgtcg 17468508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 229 - 293
Target Start/End: Original strand, 21465407 - 21465471
Alignment:
Q  229 acaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||| |||||| |||||||||||||||||||| |||||||   |||||||||||||| |||||||    
T  21465407 acacggacacagctaataatttgaaaaaatcatataattcgatgtaattacaagtgttggtgtcg 21465471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 44694791 - 44694851
Alignment:
Q  234 gacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||| | |||||||| |||||||||||||||| ||||||||||||||||| || |||||    
T  44694791 gacacagcaaataattttaaaaaatcacataattaagcgtaattacaagtgttggcgtcgg 44694851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 242 - 293
Target Start/End: Complemental strand, 11927137 - 11927086
Alignment:
Q  242 taataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||||||||| ||||||||||||||||| ||||||| | ||||||||||||    
T  11927137 taataatttgataaaatcacataattcagtgtaattatatgtgtcggtgtcg 11927086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 227 - 294
Target Start/End: Complemental strand, 13844662 - 13844595
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||| |||||||  |||||||||||| |||||||||||||| || ||||||| | |||||||||||||    
T  13844662 acacgccgacactgctaataatttgagaaaatcacataattgagtgtaattatatgtgtcggtgtcgg 13844595  T

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Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 241 - 292
Target Start/End: Complemental strand, 20679447 - 20679396
Alignment:
Q  241 ctaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    |||||||||||| ||||||||||| ||||| ||||||| |||||||||||||    
T  20679447 ctaataatttgagaaaatcacatagttcagtgtaattataagtgtcggtgtc 20679396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 242 - 293
Target Start/End: Original strand, 24669441 - 24669492
Alignment:
Q  242 taataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||||||||  |||| ||||||||||| ||||||||||||||||||||||    
T  24669441 taataatttgaggaaattacataattcagtgtaattacaagtgtcggtgtcg 24669492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 179 - 278
Target Start/End: Original strand, 36934615 - 36934714
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||| ||||||||| ||  | |||  |||| || |||||||||||||  ||||||  ||||||||| |||||||||||||||||||  |||||||    
T  36934615 tatgaagcatggatacggatacaaacaccaaacacgacacggacactaacacgtcgacaccgctaataattcgaaaaaatcacataattcattgtaatta 36934714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 218 - 285
Target Start/End: Complemental strand, 41838198 - 41838131
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgt 285  Q
    |||||||| ||||  ||||||| |||||||||| ||||||||||||||||||| | || |||||||||    
T  41838198 cggacactgacacgtcgacacagctaataatttaaaaaaatcacataattcagtgcaactacaagtgt 41838131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 241 - 294
Target Start/End: Original strand, 3025558 - 3025611
Alignment:
Q  241 ctaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||||||||| ||||||||||||||||| ||||||| | ||||| |||||||    
T  3025558 ctaataatttgagaaaatcacataattcagtgtaattataggtgtcagtgtcgg 3025611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 268
Target Start/End: Original strand, 3677751 - 3677820
Alignment:
Q  199 acggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattc 268  Q
    ||||||| | ||||| || |||| ||| ||||| |||||||| ||||||||| |||||||||||||||||    
T  3677751 acggatatcagacacgacacggatactgacacatcgacacaattaataattttaaaaaatcacataattc 3677820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 218 - 291
Target Start/End: Original strand, 7442829 - 7442902
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgt 291  Q
    ||||||||||||  || ||||  |||||||||| | ||||| ||||||||||| |||||||||||||| |||||    
T  7442829 cggacactaacatgccaacaccgctaataatttcataaaattacataattcagtgtaattacaagtgttggtgt 7442902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 291
Target Start/End: Original strand, 7658415 - 7658520
Alignment:
Q  186 cacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgt 285  Q
    |||| ||||||||||||| | |||| ||||| | ||||   | || ||||||| ||||||||||||| ||||| ||||||||||| ||||||| |  |||    
T  7658415 cacgaatacggacacggacatcggatacaacacagacatcgatacgccgacaccactaataatttgagaaaattacataattcagtgtaattatatttgt 7658514  T
Q  286 cggtgt 291  Q
    ||||||    
T  7658515 cggtgt 7658520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 224 - 293
Target Start/End: Original strand, 11944655 - 11944724
Alignment:
Q  224 ctaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||||| |||||||   ||||||||||| |||||||||||| |||| ||||||| | ||||||||||||    
T  11944655 ctaacacgccgacactgttaataatttgataaaatcacataactcagtgtaattatatgtgtcggtgtcg 11944724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 241 - 294
Target Start/End: Original strand, 34897092 - 34897145
Alignment:
Q  241 ctaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||||||||| ||||||||||||||||| ||||||| | |||||| ||||||    
T  34897092 ctaataatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcgg 34897145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 240 - 292
Target Start/End: Original strand, 14134705 - 14134757
Alignment:
Q  240 actaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    ||||||||||||| ||||||||||||||||| ||||||| |  ||||||||||    
T  14134705 actaataatttgagaaaatcacataattcagtgtaattatatatgtcggtgtc 14134757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 218 - 262
Target Start/End: Complemental strand, 24196672 - 24196628
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcaca 262  Q
    |||||||  |||| |||||||||||||||||||||||||||||||    
T  24196672 cggacaccgacacgccgacacaactaataatttgaaaaaatcaca 24196628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 290
Target Start/End: Complemental strand, 31236643 - 31236580
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtg 290  Q
    |||| |||||||  |||||||||||| ||||||||||||||||  ||||||| | |||||||||    
T  31236643 acacgccgacactgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtg 31236580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 278
Target Start/End: Complemental strand, 37283924 - 37283825
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||||||||| ||| ||| ||| ||||  || |||||||| |||  | | |||  |||||||| ||| ||||||||||||||||| |||||||    
T  37283924 tatgaagcacggatacgtacatggacaccagacatgacacggacactgacatgcgggcaccgctaataatctgagaaaatcacataattcagtgtaatta 37283825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 228 - 278
Target Start/End: Original strand, 4611528 - 4611578
Alignment:
Q  228 cacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||||||||  |||||||||||| ||||| ||||||||||| |||||||    
T  4611528 cacaccgacaccgctaataatttgagaaaataacataattcagtgtaatta 4611578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 43737927 - 43737882
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacac 224  Q
    |||||||||||||||| |||||||| ||||||||| || |||||||    
T  43737927 tatgaagcacggatacagacacggacaccggacacgacacggacac 43737882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 180 - 294
Target Start/End: Complemental strand, 575 - 461
Alignment:
Q  180 atgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattac 279  Q
    |||||||||||||||||||||||| |||| ||||  | |||||||| | || |||||||  |||||||||||||||||||||| ||||||| ||||||||    
T  575 atgaagcacggatacggacacggacaccgaacacgccacggacactgatacgccgacactgctaataatttgaaaaaatcacaaaattcagtgtaattac 476  T
Q  280 aagtgtcggtgtcgg 294  Q
    |||||||||||||||    
T  475 aagtgtcggtgtcgg 461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 179 - 290
Target Start/End: Original strand, 130427 - 130538
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||| ||||||||||||||| ||||||||| || |||||| | |||  ||||||||  ||||| ||||||||||||||||||||||| |||||||    
T  130427 tatgaagcatggatacggacacggacaccggacacgacacggacaatgacaagccgacacagttaatagtttgaaaaaatcacataattcagtgtaatta 130526  T
Q  279 caagtgtcggtg 290  Q
    ||||||||||||    
T  130527 caagtgtcggtg 130538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 199 - 293
Target Start/End: Original strand, 20137 - 20231
Alignment:
Q  199 acggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||| ||||||||| || |||||| | |||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  20137 acggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcg 20231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 205 - 292
Target Start/End: Complemental strand, 178907 - 178819
Alignment:
Q  205 accggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatca-cataattcagcgtaattacaagtgtcggtgtc 292  Q
    ||||||||| || |||||||| |||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||    
T  178907 accggacacgacacggacactgacacgccgacacaactaataatttgaaaaaatcatcataattcagtgtaattacaagtgtcagtgtc 178819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 218 - 286
Target Start/End: Complemental strand, 192324 - 192256
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtc 286  Q
    |||||||| |||| |||||||   ||||||||||| ||||| ||||||||| | |||||||||||||||    
T  192324 cggacactgacacgccgacaccgttaataatttgagaaaattacataattcggtgtaattacaagtgtc 192256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 56; Significance: 8e-23; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 217 - 292
Target Start/End: Complemental strand, 17825 - 17750
Alignment:
Q  217 tcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    ||||||| |||||| | |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  17825 tcggacaataacacgctgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 17750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 193 - 294
Target Start/End: Original strand, 13359 - 13460
Alignment:
Q  193 acggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    ||||| ||||| |||||| |  || |||||||| |||| ||||||||||||||||||||| ||||||||||||||||| | ||||||||| |||||||||    
T  13359 acggatacggacaccggagatgacacggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtc 13458  T
Q  293 gg 294  Q
    ||    
T  13459 gg 13460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 193 - 294
Target Start/End: Complemental strand, 21968 - 21867
Alignment:
Q  193 acggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    ||||| ||||| |||||| |  || |||||||| |||| ||||||||||||||||||||| ||||||||||||||||| | ||||||||| |||||||||    
T  21968 acggatacggacaccggagatgacacggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtc 21869  T
Q  293 gg 294  Q
    ||    
T  21868 gg 21867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 218 - 285
Target Start/End: Original strand, 51795 - 51862
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgt 285  Q
    |||||||| |||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  51795 cggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 51862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 198 - 293
Target Start/End: Original strand, 241558 - 241653
Alignment:
Q  198 cacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||| ||||||||| || |||||||| |||| |||||||| ||||||||||| ||||||||||||||| || |||||||  |||||||||||||    
T  241558 cacggacaccggacacgacacggacactgacacgccgacacagctaataatttggaaaaatcacataatttagtgtaattatgagtgtcggtgtcg 241653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 227 - 284
Target Start/End: Original strand, 14523 - 14580
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtg 284  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  14523 acacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtg 14580  T

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Target: scaffold0793 (Bit Score: 46; Significance: 8e-17; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 224 - 292
Target Start/End: Complemental strand, 4953 - 4884
Alignment:
Q  224 ctaacacaccgacacaactaataatttgaaaaaa-tcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    |||||||||||||||| |||||||||| |||||| ||||||||||||| |||||||||||||| ||||||    
T  4953 ctaacacaccgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgttggtgtc 4884  T

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Target: scaffold0025 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 218 - 293
Target Start/End: Original strand, 23753 - 23829
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaa-aatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||||| |||||| | ||||  |||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  23753 cggacactgacacactgtcacagttaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 23829  T

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Target: scaffold0007 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 179 - 287
Target Start/End: Complemental strand, 225382 - 225274
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||| |||||| || |||||||| ||||||||| || |||||||| |||| ||||||||  ||||||||||| ||||| ||||||| ||  |||||||    
T  225382 tatgaaacacggacacagacacggacaccggacacgacacggacactgacacgccgacacagataataatttgagaaaatgacataatacaatgtaatta 225283  T
Q  279 caagtgtcg 287  Q
     ||||||||    
T  225282 taagtgtcg 225274  T

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Target: scaffold0171 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 179 - 293
Target Start/End: Original strand, 23372 - 23479
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||||||||||||||||| ||  ||||||     |||||| |||| ||||||||  |||||| |  ||||||||||||||||||| |||||||    
T  23372 tatgaagcacggatacggacacggacac--gacaca-----gacactgacacgccgacacagataataactcaaaaaaatcacataattcagtgtaatta 23464  T
Q  279 caagtgtcggtgtcg 293  Q
     ||||||||||||||    
T  23465 taagtgtcggtgtcg 23479  T

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Target: scaffold0171; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 221 - 293
Target Start/End: Original strand, 23497 - 23570
Alignment:
Q  221 acactaacacaccgacacaactaataatttgaaaa-aatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||| |||||||||||||  |||||| || |||| ||||||||||||||| ||||||| ||||||| ||||||    
T  23497 acactgacacaccgacacagttaataacttaaaaaaaatcacataattcagtgtaattataagtgtcagtgtcg 23570  T

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Target: scaffold0122 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 227 - 294
Target Start/End: Original strand, 8003 - 8069
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||| ||||||||||||||||||||||||||||| ||||| ||| ||||||| |||||||||||||||    
T  8003 acacgccgacacaactaataatttgaaaaaatcatataatacagtgtaatta-aagtgtcggtgtcgg 8069  T

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Target: scaffold0122; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 293
Target Start/End: Original strand, 8619 - 8725
Alignment:
Q  187 acggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtc 286  Q
    ||||| || |||||||| ||||||||| ||  ||||||| ||||  ||||||  ||||||||||   ||||||||||| |||||  |||||| |||||||    
T  8619 acggacaccgacacggacaccggacacgacatggacactgacacgtcgacacttctaataatttaggaaaatcacatagttcagtataattataagtgtc 8718  T
Q  287 ggtgtcg 293  Q
    |||||||    
T  8719 ggtgtcg 8725  T

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Target: scaffold0246 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 207 - 285
Target Start/End: Original strand, 19549 - 19626
Alignment:
Q  207 cggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgt 285  Q
    ||||||| || | |||||| |||| |||| ||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  19549 cggacacgacactgacactgacacgccgatacaactaataatttgaaaa-atcacataattcagtgtaattacaagtgt 19626  T

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Target: scaffold0116 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 179 - 293
Target Start/End: Original strand, 9843 - 9957
Alignment:
Q  179 tatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    ||||||||||||||||||||||||| ||||||||| ||  ||||||  |||| |||||||| |||||  ||| | ||||||| | ||| ||| |||||||    
T  9843 tatgaagcacggatacggacacggacaccggacacgacatggacaccgacacgccgacacagctaatttttttagaaaatcataaaatgcagtgtaatta 9942  T
Q  279 caagtgtcggtgtcg 293  Q
     | ||||||||||||    
T  9943 tatgtgtcggtgtcg 9957  T

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Target: scaffold0450 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 232 - 293
Target Start/End: Complemental strand, 8696 - 8635
Alignment:
Q  232 ccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||||||||||||||||||||| |||||||||||| |  ||||||||| |||||||||||    
T  8696 ccgacacaactaataatttgaaaatatcacataattcggtataattacaaatgtcggtgtcg 8635  T

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Target: scaffold0050 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 233 - 294
Target Start/End: Original strand, 70277 - 70338
Alignment:
Q  233 cgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||||  ||||||||||||||||| ||||||||||| ||||||| |||||||||||||||    
T  70277 cgacacagttaataatttgaaaaaataacataattcagtgtaattataagtgtcggtgtcgg 70338  T

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Target: scaffold0020 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 220 - 293
Target Start/End: Complemental strand, 135385 - 135312
Alignment:
Q  220 gacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||| |||||||||||||  |||||||||||| ||||||||||||||| | ||||||| | ||||||||||||    
T  135385 gacaccaacacaccgacactgctaataatttgagaaaatcacataattctgtgtaattatatgtgtcggtgtcg 135312  T

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Target: scaffold0004 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 218 - 286
Target Start/End: Original strand, 92791 - 92859
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtc 286  Q
    |||||||| |||| |||||||  |||||||||||| ||||| ||||||||||| |||||||||||||||    
T  92791 cggacactgacacgccgacaccgctaataatttgagaaaattacataattcagtgtaattacaagtgtc 92859  T

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Target: scaffold0004; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 221 - 292
Target Start/End: Original strand, 123612 - 123686
Alignment:
Q  221 acactaacacaccgacacaactaataatttgaaaaaa---tcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    ||||| |||| || ||||| |||||||||| ||||||   ||||||||||||| |||||||||||||||||||||    
T  123612 acactgacacgccaacacagctaataatttaaaaaaagaatcacataattcagtgtaattacaagtgtcggtgtc 123686  T

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Target: scaffold0004; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 246 - 293
Target Start/End: Original strand, 83172 - 83219
Alignment:
Q  246 aatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||| ||||||| ||||||||||| |||||||||| |||||||||||    
T  83172 aatttaaaaaaatgacataattcagtgtaattacaaatgtcggtgtcg 83219  T

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Target: scaffold0136 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 242 - 293
Target Start/End: Complemental strand, 3900 - 3849
Alignment:
Q  242 taataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||| ||||||    
T  3900 taataatttaaaaaaatcacataattcagtgtaattacaagtgtcagtgtcg 3849  T

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Target: scaffold0227 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 227 - 285
Target Start/End: Complemental strand, 7377 - 7319
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgt 285  Q
    |||| |||||||||||||||||||| ||||||||||||||| || ||||||| ||||||    
T  7377 acacgccgacacaactaataatttggaaaaatcacataatttagtgtaattataagtgt 7319  T

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Target: scaffold0066 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 227 - 281
Target Start/End: Complemental strand, 33429 - 33375
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaa 281  Q
    |||| |||||||| |||||||||||||||||| ||||||||||| ||||||||||    
T  33429 acacgccgacacagctaataatttgaaaaaataacataattcagtgtaattacaa 33375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 233 - 294
Target Start/End: Complemental strand, 7092 - 7031
Alignment:
Q  233 cgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    ||||||| |||||||||||||||||| |||||||| ||  ||||||||||||| ||||||||    
T  7092 cgacacagctaataatttgaaaaaattacataatttagtataattacaagtgtaggtgtcgg 7031  T

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Target: scaffold0083 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 45617 - 45529
Alignment:
Q  207 cggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatc-acataattcagcgtaattacaagtgtcggtgtcgg 294  Q
    |||||||||| |||||||| ||||  |||||||| |||| || | ||||||   ||||||||||| |||||||||||||||||||||||    
T  45617 cggacacaacacggacactgacacgtcgacacaattaattatctaaaaaaaaatacataattcagtgtaattacaagtgtcggtgtcgg 45529  T

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Target: scaffold0019 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 293
Target Start/End: Original strand, 71709 - 71784
Alignment:
Q  220 gacactaacacaccgacacaactaataatttg--aaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||| |||| |||||||| |||||||||||  ||||||||||| ||||||| |||||||| |||||| ||||||    
T  71709 gacactgacacgccgacacagctaataatttgaaaaaaaatcacacaattcagtgtaattactagtgtcagtgtcg 71784  T

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Target: scaffold0049 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 241 - 292
Target Start/End: Original strand, 63780 - 63831
Alignment:
Q  241 ctaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 292  Q
    |||||||||||| ||||| ||||||||||| | |||||||||||||||||||    
T  63780 ctaataatttgagaaaattacataattcagtgcaattacaagtgtcggtgtc 63831  T

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Target: scaffold0044 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 243 - 290
Target Start/End: Original strand, 53189 - 53236
Alignment:
Q  243 aataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtg 290  Q
    |||||||||| ||||||||||||||||| ||||||| |||||||||||    
T  53189 aataatttgagaaaatcacataattcagtgtaattataagtgtcggtg 53236  T

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Target: scaffold0022 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 199 - 278
Target Start/End: Original strand, 90808 - 90887
Alignment:
Q  199 acggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatta 278  Q
    |||||||| |||||| || | |||||| ||||||| |||| | ||||||||||| ||||||| ||||||||| |||||||    
T  90808 acggatactggacacgacacagacactgacacaccaacaccattaataatttgagaaaatcatataattcagtgtaatta 90887  T

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Target: scaffold0008 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 190 - 293
Target Start/End: Complemental strand, 263475 - 263372
Alignment:
Q  190 gatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggt 289  Q
    |||||||||||||| || ||| || || |||||||| |||   | ||||  |||||||||||| |||| |||||||||||| ||||||| ||||||| ||    
T  263475 gatacggacacggacactggatacgacacggacactgacatgtcaacactgctaataatttgagaaaaccacataattcagtgtaattataagtgtcagt 263376  T
Q  290 gtcg 293  Q
    ||||    
T  263375 gtcg 263372  T

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Target: scaffold0311 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 10546 - 10509
Alignment:
Q  218 cggacactaacacaccgacacaactaataatttgaaaa 255  Q
    |||||||||||||||||||||| |||||||||||||||    
T  10546 cggacactaacacaccgacacagctaataatttgaaaa 10509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 9800 - 9747
Alignment:
Q  240 actaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    ||||||||||||| |||||||| |||||||| ||||||| | ||||||||||||    
T  9800 actaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcg 9747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 227 - 275
Target Start/End: Original strand, 1028 - 1076
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaa 275  Q
    ||||||||||||  |||||||||||||||||| ||||||||||| ||||    
T  1028 acacaccgacaccgctaataatttgaaaaaattacataattcagtgtaa 1076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 293
Target Start/End: Complemental strand, 25819 - 25768
Alignment:
Q  242 taataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcg 293  Q
    |||||||| || |||||||||||||| || ||||||| ||||||||||||||    
T  25819 taataattagagaaaatcacataatttagtgtaattataagtgtcggtgtcg 25768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 293
Target Start/End: Original strand, 19089 - 19203
Alignment:
Q  178 atatgaagcacggatacggacacggataccggacacaactcggacactaacacaccgacacaactaataatttgaaaaaatcacataattcagcgtaatt 277  Q
    |||||||||||||| || |||||||| | | || |  || ||||||||||||| ||||||    ||||||||| ||||||| ||||||||||| || |||    
T  19089 atatgaagcacggacacagacacggacatcagatatgacacggacactaacacgccgacatggttaataattt-aaaaaatgacataattcagtgtgatt 19187  T
Q  278 acaagtgtcggtgtcg 293  Q
    | || |||||||||||    
T  19188 aaaaatgtcggtgtcg 19203  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.00000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 252 - 291
Target Start/End: Complemental strand, 174594 - 174555
Alignment:
Q  252 aaaaaatcacataattcagcgtaattacaagtgtcggtgt 291  Q
    ||||||| |||||||||||||||||||||| |||||||||    
T  174594 aaaaaatgacataattcagcgtaattacaaatgtcggtgt 174555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 252 - 291
Target Start/End: Complemental strand, 180107 - 180068
Alignment:
Q  252 aaaaaatcacataattcagcgtaattacaagtgtcggtgt 291  Q
    ||||||| |||||||||||||||||||||| |||||||||    
T  180107 aaaaaatgacataattcagcgtaattacaaatgtcggtgt 180068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 24018 - 24071
Alignment:
Q  227 acacaccgacacaactaataatttgaaaaaatcacataattcagcgtaattaca 280  Q
    ||||||||||||| ||||||||||  ||||||| ||||||| || |||||||||    
T  24018 acacaccgacacagctaataattttcaaaaatctcataatttagtgtaattaca 24071  T

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