View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4523-Insertion-4 (Length: 516)
Name: NF4523-Insertion-4
Description: NF4523
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4523-Insertion-4 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 493; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 493; E-Value: 0
Query Start/End: Original strand, 8 - 516
Target Start/End: Complemental strand, 21878701 - 21878193
Alignment:
| Q |
8 |
atcttctgcactaaccatttcccttaatagagtttcaagctgccacatctgttttcaagagatgtaaatttaaaaaacattctgaacagaagatatatgt |
107 |
Q |
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| T |
21878701 |
atcttctgcactaaccatttcccttaatagagtttcaagctgccacatctgttttcaagagatgtaaatttaaaaaacattctgaacagaagatatatgt |
21878602 |
T |
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| Q |
108 |
cgttacaatttaatcggcttctaattctaattacctctatatatccattatgatctggatcaagctcttccatgatcaaagaagcataattatcagcatg |
207 |
Q |
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| T |
21878601 |
cgttacaatttaatcggcttctaattctaattacctctatatatccattatgatctggatcaagctcttccatgatcaaagaagcataattatcagcatg |
21878502 |
T |
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| Q |
208 |
ttgtttaagatttcccaatctatttgcagaagcactcaacactataaccttttacacaaaaacagttagaattctatttaacagaattgtataaagctac |
307 |
Q |
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| T |
21878501 |
ttgtttaagatttcccaatctatttgcagaagcactcaacactataaccttttacacaaaaacagttagaattctatttaacagaattgtataaagctac |
21878402 |
T |
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| Q |
308 |
gtagcaccaacactcgacaatatgtattgaaagcgtgaacaaatatctgacacatgaacatacaatcatttcaatttttcaaactattaccgatgtttga |
407 |
Q |
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| T |
21878401 |
gtagcaccaacactcgacaatatgtattgaaagcgtgaccaaatatctgacacatgaacatacaatcatttcaatttttcaaactattaccaatgtttga |
21878302 |
T |
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| Q |
408 |
gtctgttcttggtcagtgcatcataggaaaaaagattggtataaaaagaatttacataatctcaatactcacctccttaacctcctcttcagataaccta |
507 |
Q |
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| T |
21878301 |
gtctgtttttggtcagtgcatcataggaaaaaagattggtataaaaagaatttacataatctcaatactcacctccttaacctcctcttcggataaccta |
21878202 |
T |
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| Q |
508 |
ccatctcca |
516 |
Q |
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| T |
21878201 |
ccatctcca |
21878193 |
T |
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