View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4523-Insertion-6 (Length: 224)
Name: NF4523-Insertion-6
Description: NF4523
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4523-Insertion-6 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 8 - 224
Target Start/End: Original strand, 14600538 - 14600764
Alignment:
| Q |
8 |
cattaaccagtggttaaattcaccataattaataacttgagacaacacattcccacaaagttgaatccttatcaccttatccacacnnnnnnnn------ |
101 |
Q |
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| T |
14600538 |
cattaaccagtggttaaattcaccataattaataacttgagacaacacattcccacaaagttgaatccttatcaccttatccacacacaaaaaaaaaaaa |
14600637 |
T |
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| Q |
102 |
----cactctttagaatcagattctcataaagtaaacaacccttgaacaaaatatcaactttccattaagacacaattcaatgagcataaacaaacagaa |
197 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14600638 |
aaaacactctttagaatcagattctcataaagtaaacaacccttgaacaaaatatcaactttccattaagacacaattcaatgagcataaacaaacagaa |
14600737 |
T |
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| Q |
198 |
cccagatgccaaaatagctttcgtatg |
224 |
Q |
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||||||||||||||||||||||||||| |
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| T |
14600738 |
cccagatgccaaaatagctttcgtatg |
14600764 |
T |
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