View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4523_high_14 (Length: 318)
Name: NF4523_high_14
Description: NF4523
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4523_high_14 |
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Alignment Details
Target: chr4 (Bit Score: 206; Significance: 1e-112; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 15 - 228
Target Start/End: Original strand, 24056572 - 24056785
Alignment:
| Q |
15 |
aaaaggcactgaaataaccggaaacctataaacccaagagcctgagcggccaaagaactcctagccgtggaaaccgcaaaagacacaccagtagcagagg |
114 |
Q |
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| T |
24056572 |
aaaaggcactgaaataaccggaaacctataaacccaagagcctgagcggccaaagaactcctagccgtggaaaccgcaaaagatacaccagtagcagagg |
24056671 |
T |
|
| Q |
115 |
cacaatactgatgctgttatatatctcctgctaaaaccactcacaacagaaaacacttcctaaagaaaagcgcagacagcagcaaatgtaaacttggcat |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
24056672 |
cacaatactgatgctgttatatatctcctgctaaaaccactcacaacagaaaacacttcctaaagaaaagcgcagacagcagcaaatgtaaactcggcat |
24056771 |
T |
|
| Q |
215 |
accccagcctcagc |
228 |
Q |
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|||||||||||||| |
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| T |
24056772 |
accccagcctcagc |
24056785 |
T |
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