View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4523_low_26 (Length: 268)
Name: NF4523_low_26
Description: NF4523
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4523_low_26 |
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Alignment Details
Target: chr1 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 22 - 256
Target Start/End: Complemental strand, 38246482 - 38246247
Alignment:
| Q |
22 |
aacggaaggagtactggaagaagaatcggaggaagagtcgttggagggttgaggaggggagaattgacgaagttgtcctt-ggtgatgccggagacgttg |
120 |
Q |
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| T |
38246482 |
aacggaaggagtactggaagaagaatcggaggaagagtcgttggagggttgaggaggggagaattgacgaagttgtcctttggtgatgccggagacgttg |
38246383 |
T |
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| Q |
121 |
gtggcggagagaagagcggttttaattagggtttcgaaatctgaagttctggcgggtaatgaacgtttggcatattcgttagcgattaaagtgagaccgt |
220 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38246382 |
gtggcggagagaagagcggttttaattagggtttcgaaatctgaagttctggcgggtaatgaacgtttggcatattcgttagcgattaaagtgagaccgt |
38246283 |
T |
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| Q |
221 |
tgaatagtctcgtaagatccttcgtcgatgatgatg |
256 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
38246282 |
tgaatagtctcgtaagatccttcgtcgatgatgatg |
38246247 |
T |
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