View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4524_low_6 (Length: 272)
Name: NF4524_low_6
Description: NF4524
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4524_low_6 |
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Alignment Details
Target: chr3 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 14 - 254
Target Start/End: Original strand, 45107784 - 45108024
Alignment:
| Q |
14 |
agatagagaaacataaaccaatgagcataggggttactaaccccaaaagtgaaatcgtccatccttttcttcctgtccttctgatcatgttgaaatccat |
113 |
Q |
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| T |
45107784 |
agatagagaaacataaaccaatgagcataggggttactaaccccaaaagcgaaatcgtccatccttttcttcctgtccttctgatcatgttgaaatccat |
45107883 |
T |
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| Q |
114 |
tttcacgcctgtttcgaacagaaacaacacatagccaagtcctgcaatggttgcaagtgtgtcttgactcccataaggaaacaaattcatcttgaggtcc |
213 |
Q |
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| T |
45107884 |
tttcacgcctgtttcgaacagaaacaacacataaccaagtcctgcaatggttgcaagtgtgtcttgactcccataaggaaacaaattcctcttgaggtcc |
45107983 |
T |
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| Q |
214 |
aaaaatattggcactgctggtcctaaaattagcccagccta |
254 |
Q |
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| T |
45107984 |
aaaaatattggcactgctggtcctaaaattagcccagccta |
45108024 |
T |
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