View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4526_low_2 (Length: 326)

Name: NF4526_low_2
Description: NF4526
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4526_low_2
NF4526_low_2
[»] chr4 (50 HSPs)
chr4 (22-316)||(29858501-29858795)
chr4 (18-61)||(51624511-51624554)
chr4 (18-64)||(14947184-14947230)
chr4 (18-60)||(14947700-14947742)
chr4 (18-60)||(25619105-25619147)
chr4 (18-67)||(48453629-48453678)
chr4 (20-64)||(43629178-43629222)
chr4 (18-65)||(44303513-44303560)
chr4 (18-60)||(20614118-20614160)
chr4 (18-60)||(29859278-29859320)
chr4 (18-64)||(34237480-34237526)
chr4 (18-60)||(44304375-44304417)
chr4 (18-64)||(46058694-46058740)
chr4 (18-60)||(53652577-53652619)
chr4 (18-67)||(17475896-17475945)
chr4 (18-66)||(1098050-1098098)
chr4 (20-64)||(2734796-2734840)
chr4 (20-60)||(11650084-11650124)
chr4 (20-60)||(22309481-22309521)
chr4 (18-66)||(41610124-41610172)
chr4 (20-60)||(44795755-44795795)
chr4 (20-60)||(46308052-46308092)
chr4 (18-58)||(50282943-50282983)
chr4 (20-60)||(53596164-53596204)
chr4 (18-57)||(14525458-14525497)
chr4 (18-65)||(25618434-25618481)
chr4 (22-65)||(40256096-40256139)
chr4 (18-65)||(46307554-46307601)
chr4 (18-60)||(14251199-14251241)
chr4 (18-60)||(17259485-17259527)
chr4 (18-60)||(17475400-17475442)
chr4 (18-60)||(20614629-20614671)
chr4 (18-60)||(22679636-22679678)
chr4 (18-60)||(24045368-24045410)
chr4 (18-60)||(28504580-28504622)
chr4 (18-60)||(31487981-31488023)
chr4 (18-52)||(34543066-34543100)
chr4 (18-60)||(39321058-39321100)
chr4 (18-60)||(42369522-42369564)
chr4 (18-60)||(51624019-51624061)
chr4 (18-60)||(56270547-56270589)
chr4 (18-60)||(56271229-56271271)
chr4 (18-59)||(22813433-22813474)
chr4 (18-63)||(24045860-24045905)
chr4 (18-63)||(44303982-44304027)
chr4 (18-66)||(9091421-9091469)
chr4 (18-66)||(11815857-11815905)
chr4 (20-60)||(37208318-37208358)
chr4 (21-65)||(43291977-43292021)
chr4 (20-60)||(44796191-44796231)
[»] scaffold0018 (1 HSPs)
scaffold0018 (18-65)||(133590-133637)
[»] chr6 (16 HSPs)
chr6 (18-63)||(10914560-10914605)
chr6 (18-64)||(14527530-14527576)
chr6 (22-65)||(1948621-1948664)
chr6 (18-65)||(17383733-17383780)
chr6 (18-65)||(31739928-31739975)
chr6 (18-60)||(3366501-3366543)
chr6 (18-60)||(14527002-14527044)
chr6 (18-60)||(17383946-17383988)
chr6 (18-60)||(21271489-21271531)
chr6 (18-60)||(21272132-21272174)
chr6 (18-60)||(22498780-22498822)
chr6 (18-60)||(26392858-26392900)
chr6 (18-60)||(28866433-28866475)
chr6 (18-60)||(29175067-29175109)
chr6 (18-67)||(9424921-9424970)
chr6 (20-60)||(13703384-13703424)
[»] scaffold0003 (1 HSPs)
scaffold0003 (18-65)||(300077-300124)
[»] chr8 (44 HSPs)
chr8 (18-65)||(30864161-30864208)
chr8 (20-60)||(2087761-2087801)
chr8 (21-60)||(15271126-15271165)
chr8 (18-65)||(22594316-22594363)
chr8 (18-65)||(25825315-25825362)
chr8 (18-64)||(2221979-2222025)
chr8 (18-64)||(8000805-8000851)
chr8 (18-63)||(16905255-16905300)
chr8 (18-66)||(2221591-2221639)
chr8 (18-62)||(13089439-13089483)
chr8 (18-66)||(26060103-26060151)
chr8 (20-60)||(41837073-41837113)
chr8 (20-60)||(43086900-43086940)
chr8 (18-66)||(45123217-45123265)
chr8 (18-65)||(22013460-22013507)
chr8 (21-60)||(22323957-22323996)
chr8 (21-60)||(29090734-29090773)
chr8 (18-69)||(40449266-40449317)
chr8 (18-65)||(41155027-41155074)
chr8 (18-57)||(43273849-43273888)
chr8 (18-65)||(45466306-45466353)
chr8 (18-60)||(761396-761438)
chr8 (18-60)||(3443034-3443076)
chr8 (18-60)||(7116475-7116517)
chr8 (18-60)||(9739798-9739840)
chr8 (18-60)||(11713203-11713245)
chr8 (18-60)||(14724632-14724674)
chr8 (18-60)||(26060645-26060687)
chr8 (18-60)||(27785969-27786011)
chr8 (18-60)||(27786498-27786540)
chr8 (18-60)||(31445672-31445714)
chr8 (18-60)||(31988913-31988955)
chr8 (18-60)||(41154620-41154662)
chr8 (18-60)||(42193782-42193824)
chr8 (18-60)||(44978347-44978389)
chr8 (20-65)||(11760930-11760975)
chr8 (18-67)||(16906477-16906526)
chr8 (26-67)||(37035888-37035929)
chr8 (20-65)||(41658398-41658443)
chr8 (20-60)||(9739279-9739319)
chr8 (20-60)||(9807295-9807335)
chr8 (20-60)||(23017203-23017243)
chr8 (20-60)||(33098985-33099025)
chr8 (20-60)||(45123630-45123670)
[»] chr5 (43 HSPs)
chr5 (18-65)||(1095493-1095540)
chr5 (18-60)||(17420632-17420674)
chr5 (18-65)||(1031317-1031364)
chr5 (18-65)||(7265627-7265674)
chr5 (22-64)||(435892-435934)
chr5 (20-70)||(3721578-3721628)
chr5 (22-60)||(4076958-4076996)
chr5 (18-60)||(14233107-14233149)
chr5 (18-60)||(25586752-25586794)
chr5 (18-64)||(27121621-27121667)
chr5 (18-60)||(28905470-28905512)
chr5 (18-60)||(28941865-28941907)
chr5 (18-63)||(14348938-14348983)
chr5 (20-61)||(20243368-20243409)
chr5 (18-62)||(39010153-39010197)
chr5 (18-65)||(20243865-20243912)
chr5 (18-65)||(24100713-24100760)
chr5 (21-60)||(43387506-43387545)
chr5 (18-60)||(435557-435599)
chr5 (22-60)||(5186648-5186686)
chr5 (18-60)||(5187134-5187176)
chr5 (18-60)||(13668522-13668564)
chr5 (18-60)||(14347404-14347446)
chr5 (18-60)||(16670041-16670083)
chr5 (18-60)||(24099740-24099782)
chr5 (18-60)||(27098543-27098585)
chr5 (22-64)||(27098956-27098998)
chr5 (18-60)||(27851056-27851098)
chr5 (18-60)||(29961813-29961855)
chr5 (18-60)||(29962194-29962236)
chr5 (18-60)||(30012562-30012604)
chr5 (18-60)||(30645740-30645782)
chr5 (18-64)||(35810603-35810649)
chr5 (18-60)||(38312328-38312370)
chr5 (18-63)||(3722098-3722143)
chr5 (18-67)||(16669502-16669551)
chr5 (20-65)||(28904628-28904673)
chr5 (20-65)||(28941023-28941068)
chr5 (20-60)||(6157512-6157552)
chr5 (18-66)||(9050450-9050498)
chr5 (18-50)||(13824659-13824691)
chr5 (21-65)||(27850680-27850724)
chr5 (20-64)||(39023451-39023495)
[»] chr7 (50 HSPs)
chr7 (18-60)||(28460998-28461040)
chr7 (18-61)||(30284238-30284281)
chr7 (18-60)||(5905717-5905759)
chr7 (18-64)||(18458788-18458834)
chr7 (18-60)||(34621798-34621840)
chr7 (18-60)||(45995270-45995312)
chr7 (20-65)||(38444030-38444075)
chr7 (18-63)||(44332999-44333044)
chr7 (20-65)||(48094838-48094883)
chr7 (18-66)||(3217227-3217275)
chr7 (20-60)||(5101496-5101536)
chr7 (18-62)||(8090822-8090866)
chr7 (18-66)||(16962841-16962889)
chr7 (20-60)||(28460566-28460606)
chr7 (18-66)||(45456731-45456779)
chr7 (18-65)||(472888-472935)
chr7 (18-65)||(712527-712574)
chr7 (18-65)||(20493743-20493790)
chr7 (18-65)||(31852095-31852142)
chr7 (18-61)||(32072706-32072749)
chr7 (18-65)||(40852173-40852220)
chr7 (21-60)||(44495706-44495745)
chr7 (18-65)||(45457117-45457164)
chr7 (18-60)||(3217767-3217809)
chr7 (18-60)||(5905131-5905173)
chr7 (18-60)||(7776460-7776502)
chr7 (18-60)||(7776970-7777012)
chr7 (18-60)||(13965043-13965085)
chr7 (18-60)||(21433061-21433103)
chr7 (18-60)||(24733632-24733674)
chr7 (18-60)||(27284245-27284287)
chr7 (18-60)||(27284622-27284664)
chr7 (18-60)||(32072301-32072343)
chr7 (18-60)||(34620219-34620261)
chr7 (18-60)||(36721006-36721048)
chr7 (18-60)||(36951059-36951101)
chr7 (18-60)||(37374470-37374512)
chr7 (18-60)||(39143524-39143566)
chr7 (18-60)||(40851773-40851815)
chr7 (18-60)||(42287314-42287356)
chr7 (18-56)||(44496091-44496129)
chr7 (18-60)||(47987330-47987372)
chr7 (18-63)||(751597-751642)
chr7 (18-63)||(5101248-5101293)
chr7 (20-65)||(30283916-30283961)
chr7 (18-71)||(43704937-43704990)
chr7 (20-60)||(713077-713117)
chr7 (21-65)||(23140268-23140312)
chr7 (20-60)||(39143149-39143189)
chr7 (18-62)||(41911277-41911320)
[»] chr2 (38 HSPs)
chr2 (18-60)||(12966243-12966285)
chr2 (18-63)||(16329745-16329790)
chr2 (18-65)||(4979713-4979760)
chr2 (18-65)||(4997623-4997670)
chr2 (18-65)||(5381534-5381581)
chr2 (18-60)||(9401123-9401165)
chr2 (18-60)||(16712860-16712902)
chr2 (18-60)||(25334622-25334664)
chr2 (18-71)||(2804501-2804554)
chr2 (22-67)||(21533044-21533089)
chr2 (18-66)||(677933-677981)
chr2 (18-66)||(15136348-15136396)
chr2 (20-60)||(39107776-39107816)
chr2 (18-65)||(677382-677429)
chr2 (21-60)||(11129885-11129924)
chr2 (18-65)||(18064442-18064489)
chr2 (18-60)||(2822307-2822349)
chr2 (18-60)||(2970830-2970872)
chr2 (18-60)||(3202668-3202710)
chr2 (22-60)||(3203148-3203186)
chr2 (18-60)||(4602830-4602872)
chr2 (18-60)||(4844051-4844093)
chr2 (18-60)||(8444955-8444997)
chr2 (18-60)||(11714010-11714052)
chr2 (18-64)||(14287831-14287876)
chr2 (18-60)||(16712440-16712482)
chr2 (18-64)||(17978112-17978158)
chr2 (18-52)||(25882003-25882037)
chr2 (18-60)||(26424837-26424879)
chr2 (18-60)||(32194445-32194487)
chr2 (18-60)||(32194842-32194884)
chr2 (18-64)||(38536631-38536677)
chr2 (20-60)||(5382033-5382073)
chr2 (21-65)||(5484957-5485001)
chr2 (18-66)||(8885655-8885703)
chr2 (20-60)||(18469596-18469636)
chr2 (25-65)||(20558915-20558955)
chr2 (18-66)||(39109516-39109564)
[»] chr1 (60 HSPs)
chr1 (18-60)||(1040152-1040194)
chr1 (18-60)||(1047058-1047100)
chr1 (18-67)||(7049083-7049132)
chr1 (20-64)||(5805993-5806037)
chr1 (20-60)||(32319867-32319907)
chr1 (18-65)||(24231498-24231545)
chr1 (18-60)||(16659917-16659959)
chr1 (18-60)||(27526836-27526878)
chr1 (18-60)||(28050028-28050070)
chr1 (18-67)||(3798320-3798369)
chr1 (18-67)||(50227927-50227976)
chr1 (18-70)||(3798723-3798775)
chr1 (18-66)||(50227512-50227560)
chr1 (18-66)||(52179384-52179432)
chr1 (18-65)||(5598516-5598563)
chr1 (18-65)||(5804691-5804738)
chr1 (18-65)||(14244573-14244620)
chr1 (18-65)||(24370113-24370160)
chr1 (18-64)||(32320297-32320344)
chr1 (18-72)||(36967265-36967320)
chr1 (18-65)||(37483052-37483099)
chr1 (21-60)||(38902849-38902888)
chr1 (18-65)||(45678710-45678757)
chr1 (20-66)||(1039694-1039740)
chr1 (20-66)||(1046600-1046646)
chr1 (18-52)||(6328343-6328377)
chr1 (18-60)||(6714716-6714758)
chr1 (18-60)||(9478259-9478301)
chr1 (18-60)||(10719646-10719688)
chr1 (22-64)||(12501340-12501382)
chr1 (18-60)||(24381174-24381216)
chr1 (18-60)||(31488028-31488070)
chr1 (18-60)||(33145964-33146006)
chr1 (21-59)||(33171856-33171894)
chr1 (18-64)||(34023587-34023633)
chr1 (18-60)||(35368859-35368901)
chr1 (18-60)||(35814409-35814451)
chr1 (18-60)||(37483556-37483598)
chr1 (18-60)||(37708592-37708634)
chr1 (18-60)||(38980067-38980109)
chr1 (18-60)||(42617206-42617248)
chr1 (18-60)||(44114531-44114573)
chr1 (18-60)||(46448220-46448262)
chr1 (18-60)||(48498213-48498255)
chr1 (18-64)||(49548121-49548167)
chr1 (18-60)||(50138498-50138540)
chr1 (18-60)||(50138883-50138925)
chr1 (18-67)||(15073411-15073460)
chr1 (20-65)||(16659075-16659120)
chr1 (18-63)||(31698297-31698342)
chr1 (20-65)||(34022467-34022512)
chr1 (18-75)||(46448754-46448810)
chr1 (20-60)||(5599050-5599090)
chr1 (20-60)||(7121835-7121875)
chr1 (20-60)||(7334943-7334983)
chr1 (20-60)||(20257971-20258011)
chr1 (20-60)||(31488427-31488467)
chr1 (20-60)||(36986002-36986042)
chr1 (20-60)||(39851556-39851596)
chr1 (20-60)||(42616698-42616738)
[»] scaffold0054 (2 HSPs)
scaffold0054 (18-74)||(57571-57627)
scaffold0054 (18-60)||(57025-57067)
[»] chr3 (32 HSPs)
chr3 (20-64)||(8101058-8101102)
chr3 (20-64)||(43465136-43465180)
chr3 (21-60)||(48082874-48082913)
chr3 (18-60)||(40503242-40503284)
chr3 (18-60)||(48085252-48085294)
chr3 (18-63)||(26247192-26247237)
chr3 (18-59)||(52255544-52255585)
chr3 (20-64)||(24244464-24244508)
chr3 (21-60)||(30359325-30359364)
chr3 (18-65)||(32309132-32309179)
chr3 (18-65)||(41263556-41263603)
chr3 (18-57)||(45529995-45530034)
chr3 (18-60)||(875970-876012)
chr3 (18-60)||(966983-967025)
chr3 (18-60)||(6276061-6276103)
chr3 (18-60)||(12739881-12739923)
chr3 (18-60)||(12739967-12740009)
chr3 (18-60)||(13301969-13302011)
chr3 (18-60)||(13312625-13312667)
chr3 (18-60)||(13355178-13355220)
chr3 (18-60)||(24243010-24243052)
chr3 (18-60)||(28919092-28919134)
chr3 (18-60)||(43464815-43464857)
chr3 (18-60)||(44712078-44712120)
chr3 (18-60)||(45940218-45940260)
chr3 (18-60)||(50531121-50531163)
chr3 (18-60)||(51676149-51676191)
chr3 (18-60)||(52857298-52857340)
chr3 (18-67)||(53228227-53228276)
chr3 (20-60)||(24242451-24242491)
chr3 (20-60)||(26246871-26246911)
chr3 (21-61)||(36174510-36174550)
[»] scaffold0009 (1 HSPs)
scaffold0009 (20-63)||(218178-218221)
[»] scaffold0006 (1 HSPs)
scaffold0006 (18-64)||(83012-83058)
[»] scaffold0027 (1 HSPs)
scaffold0027 (21-60)||(40095-40134)
[»] scaffold0220 (1 HSPs)
scaffold0220 (18-60)||(25966-26008)
[»] scaffold0014 (1 HSPs)
scaffold0014 (18-60)||(231271-231313)
[»] scaffold0005 (1 HSPs)
scaffold0005 (18-60)||(1478-1520)
[»] scaffold0002 (1 HSPs)
scaffold0002 (18-60)||(283187-283229)


Alignment Details
Target: chr4 (Bit Score: 259; Significance: 1e-144; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 22 - 316
Target Start/End: Complemental strand, 29858795 - 29858501
Alignment:
Q  22 ataccaattaaatacttaagagaccaaaagaacatttaaaccttataatttaagctctaaaccctctctcgcataaagccaaccttactctatgcggccc 121  Q
    |||||||||||||||||||| ||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29858795 ataccaattaaatacttaagggaccagaagagcatttaaaccttataattcaagctctaaaccctctctcgcataaagccaaccttactatatgcggccc 29858696  T
Q  122 attctaagagtccaacataactcttacaaaatccataaaaatcatttaaagacaaaaaataatattttatagataaatgttagtcgttagtaaattgtca 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||    
T  29858695 attctaagagtccaacataactcttacaaaatccataaaaatcatttaaagacaaaaaataatattttatagataaatgttagttgtcggtaaattgtca 29858596  T
Q  222 tgggaatggaaaaatgttagtgtttgatgaagaaactcgagacatggttcttaaatctccttcaacttcctttagctcactcaactgaactacct 316  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29858595 tgggaatggaaaaatgttagtgtttgatgaagaaactcgagacatggttcttaaatctccttcaacttcctttagctcactcaattgaactacct 29858501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 51624511 - 51624554
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaa 61  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  51624511 agcgatatcaattaaatacttaagagaccaaaagaacatttaaa 51624554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 14947230 - 14947184
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacct 64  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||    
T  14947230 agcgataccaattaaatacttaagggaccaaaagagcatttaaacct 14947184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 14947700 - 14947742
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  14947700 agcgataccaattaaatacttaagggaccaaaagaacatttaa 14947742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 25619105 - 25619147
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  25619105 agcgataccaattaaatagttaagagaccaaaagaacatttaa 25619147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 48453678 - 48453629
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaaccttat 67  Q
    |||||||||||||||||| ||||| |||||||||| ||||||||||||||    
T  48453678 agcgataccaattaaatagttaagggaccaaaagagcatttaaaccttat 48453629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 43629222 - 43629178
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaaacct 64  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||    
T  43629222 cgataccaaataaatacttaagagaccaaaagagcatttaaacct 43629178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 44303560 - 44303513
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||||||||||||||||| ||||| |||||||||||||||||| ||||    
T  44303560 agcgataccaattaaatagttaagggaccaaaagaacatttaagcctt 44303513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 20614160 - 20614118
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  20614160 agcgataccaattaaatagttaagggaccaaaagaacatttaa 20614118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 29859278 - 29859320
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||||||||| |||||||||| |||||||    
T  29859278 agcgataccaattaaatacttaagggaccaaaagagcatttaa 29859320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 34237526 - 34237480
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacct 64  Q
    |||||||||||||||||| ||||| |||||||||| |||||||||||    
T  34237526 agcgataccaattaaatagttaagggaccaaaagagcatttaaacct 34237480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 44304375 - 44304417
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| |||||||||||||||| |||||||    
T  44304375 agcgataccaattaaatagttaagagaccaaaagagcatttaa 44304417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 46058740 - 46058694
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacct 64  Q
    |||||||||||||||||| ||||| |||||||||| |||||||||||    
T  46058740 agcgataccaattaaatagttaagggaccaaaagagcatttaaacct 46058694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 53652619 - 53652577
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||||||||| |||||||| |||||||||    
T  53652619 agcgataccaattaaatacttaagggaccaaaataacatttaa 53652577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 17475896 - 17475945
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaaccttat 67  Q
    |||||||||||||||||| ||||| |||||||||| ||||||| ||||||    
T  17475896 agcgataccaattaaatagttaagggaccaaaagagcatttaagccttat 17475945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 1098098 - 1098050
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctta 66  Q
    |||||||||||||||||| ||||| |||||||||| ||||||| |||||    
T  1098098 agcgataccaattaaatagttaagggaccaaaagagcatttaagcctta 1098050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 2734840 - 2734796
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaaacct 64  Q
    |||||| || |||||||||||| ||||||||||||||||||||||    
T  2734840 cgatacaaaataaatacttaagggaccaaaagaacatttaaacct 2734796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 11650084 - 11650124
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  11650084 cgataccaattaaatagttaagggaccaaaagaacatttaa 11650124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 22309481 - 22309521
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||| ||||| ||||||||||||||||||||||||    
T  22309481 cgataccaatgaaatagttaagagaccaaaagaacatttaa 22309521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 41610172 - 41610124
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctta 66  Q
    |||||||||||||||||| ||||| |||||||||| ||||||| |||||    
T  41610172 agcgataccaattaaatagttaagggaccaaaagagcatttaagcctta 41610124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 44795795 - 44795755
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||||||| |||||||||| |||||||    
T  44795795 cgataccaattaaatacttaagggaccaaaagagcatttaa 44795755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 46308052 - 46308092
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  46308052 cgataccaattaaatagttaagggaccaaaagaacatttaa 46308092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 50282943 - 50282983
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacattt 58  Q
    ||||||||||| |||||||||||| ||||||||||||||||    
T  50282943 agcgataccaaataaatacttaagggaccaaaagaacattt 50282983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 53596164 - 53596204
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    ||||||||| |||||||||||| ||||||||||||||||||    
T  53596164 cgataccaaataaatacttaagggaccaaaagaacatttaa 53596204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 14525497 - 14525458
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatt 57  Q
    ||||||||||||||||||| ||||||||||||||| ||||    
T  14525497 agcgataccaattaaatacgtaagagaccaaaagagcatt 14525458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 25618481 - 25618434
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||||||||||||||||| ||||| |||||||||| ||||||| ||||    
T  25618481 agcgataccaattaaatagttaagggaccaaaagagcatttaagcctt 25618434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 40256139 - 40256096
Alignment:
Q  22 ataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||||||||||||||||||| |||||||||| ||||||| ||||    
T  40256139 ataccaattaaatacttaagggaccaaaagatcatttaagcctt 40256096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 46307601 - 46307554
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||||||||||||||||| ||||| |||||||||| ||||||| ||||    
T  46307601 agcgataccaattaaatagttaagggaccaaaagagcatttaagcctt 46307554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 14251241 - 14251199
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    ||||||||||| |||||||||||| |||||||||| |||||||    
T  14251241 agcgataccaaataaatacttaagggaccaaaagagcatttaa 14251199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 17259485 - 17259527
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||| ||||||||| |||||||||||||||| |||||||    
T  17259485 agcgatacaaattaaatagttaagagaccaaaagagcatttaa 17259527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 17475442 - 17475400
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  17475442 agcgataccaattaaatagttaagggaccaaaagagcatttaa 17475400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 20614629 - 20614671
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  20614629 agcgataccaattaaatagttaagggaccaaaagagcatttaa 20614671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 22679678 - 22679636
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  22679678 agcgataccaattaaatagttaagggaccaaaagagcatttaa 22679636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 24045410 - 24045368
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  24045410 agcgataccaattaaatagttaagggaccaaaagagcatttaa 24045368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 28504622 - 28504580
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  28504622 agcgataccaattaaatagttaagggaccaaaagagcatttaa 28504580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 31488023 - 31487981
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  31488023 agcgataccaattaaatagttaagggaccaaaagagcatttaa 31487981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 34543066 - 34543100
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaaga 52  Q
    |||||||||||||||||||||||| ||||||||||    
T  34543066 agcgataccaattaaatacttaagggaccaaaaga 34543100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 39321100 - 39321058
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  39321100 agcgataccaattaaatagttaagggaccaaaagagcatttaa 39321058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 42369522 - 42369564
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  42369522 agcgataccaattaaatagttaagggaccaaaagagcatttaa 42369564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 51624061 - 51624019
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  51624061 agcgataccaattaaatagttaagggaccaaaagagcatttaa 51624019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 56270589 - 56270547
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  56270589 agcgataccaattaaatagttaagggaccaaaagatcatttaa 56270547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 56271229 - 56271271
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  56271229 agcgataccaattaaatagttaagggaccaaaagagcatttaa 56271271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 22813433 - 22813474
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacattta 59  Q
    ||||||||||| |||||||||||| |||||||||| ||||||    
T  22813433 agcgataccaactaaatacttaagggaccaaaagagcattta 22813474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 24045860 - 24045905
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacc 63  Q
    |||||||||||||||||| ||||| || ||||||| ||||||||||    
T  24045860 agcgataccaattaaatagttaagggatcaaaagagcatttaaacc 24045905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 44304027 - 44303982
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacc 63  Q
    |||||||| || |||||||||||| |||||||||| ||||||||||    
T  44304027 agcgatactaaataaatacttaagggaccaaaagagcatttaaacc 44303982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 9091469 - 9091421
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctta 66  Q
    |||||| |||| |||||||||||| |||||||||| ||||||| |||||    
T  9091469 agcgattccaaataaatacttaagggaccaaaagagcatttaagcctta 9091421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 11815905 - 11815857
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctta 66  Q
    ||||||||||| |||||| ||||| ||||||||| |||||||| |||||    
T  11815905 agcgataccaaataaatagttaagggaccaaaagcacatttaagcctta 11815857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 37208358 - 37208318
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||| ||||| |||||||||| |||||||    
T  37208358 cgataccaattaaatagttaagggaccaaaagatcatttaa 37208318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 43291977 - 43292021
Alignment:
Q  21 gataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    ||||||||||||||| ||||| |||||||||| ||||||| ||||    
T  43291977 gataccaattaaatagttaagggaccaaaagagcatttaagcctt 43292021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 44796191 - 44796231
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||||||| || ||| |||||||||||    
T  44796191 cgataccaattaaatacttaagggatcaatagaacatttaa 44796231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 133590 - 133637
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  133590 agcgataccaattaaatacttaagggaccaaaagaacatttaaacctt 133637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 10914605 - 10914560
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacc 63  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  10914605 agcgataccaattaaatatttaagagaccaaaagaacatttaaacc 10914560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 14527530 - 14527576
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacct 64  Q
    |||||||||||||||||| ||||| |||||||||| |||||||||||    
T  14527530 agcgataccaattaaatagttaagggaccaaaagagcatttaaacct 14527576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 1948664 - 1948621
Alignment:
Q  22 ataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||||||||||||| |||||||||||||| ||||||||| ||||    
T  1948664 ataccaattaaatagttaagagaccaaaataacatttaagcctt 1948621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 17383780 - 17383733
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||||||||||||||||| ||||| |||||||||| ||||||| ||||    
T  17383780 agcgataccaattaaatagttaagggaccaaaagagcatttaagcctt 17383733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 31739928 - 31739975
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||||||||||||||||| ||||| |||||||||| ||||||| ||||    
T  31739928 agcgataccaattaaatagttaagggaccaaaagagcatttaagcctt 31739975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 3366543 - 3366501
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| |||||||||||||| | |||||||    
T  3366543 agcgataccaattaaataattaagagaccaaaatagcatttaa 3366501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 14527044 - 14527002
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| || |||||||||||||||    
T  14527044 agcgataccaattaaatagttaagggatcaaaagaacatttaa 14527002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 17383946 - 17383988
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  17383946 agcgataccaattaaatagttaagggaccaaaagagcatttaa 17383988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 21271531 - 21271489
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  21271531 agcgataccaattaaatagttaagggaccaaaagagcatttaa 21271489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 21272132 - 21272174
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  21272132 agcgataccaattaaatagttaagggaccaaaagagcatttaa 21272174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 22498780 - 22498822
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  22498780 agcgataccaattaaatagttaagggaccaaaagagcatttaa 22498822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 26392858 - 26392900
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  26392858 agcgataccaattaaatagttaagggaccaaaagagcatttaa 26392900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 28866433 - 28866475
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    ||||||||||| |||||| |||||||||||||||| |||||||    
T  28866433 agcgataccaaataaatatttaagagaccaaaagagcatttaa 28866475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 29175109 - 29175067
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  29175109 agcgataccaattaaatagttaagggaccaaaagagcatttaa 29175067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 9424921 - 9424970
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaaccttat 67  Q
    |||||||||||||||||| |||||  ||||||||| ||||||| ||||||    
T  9424921 agcgataccaattaaatagttaaggcaccaaaagagcatttaagccttat 9424970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 13703424 - 13703384
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||| ||||| |||||||||| |||||||    
T  13703424 cgataccaattaaatagttaagggaccaaaagagcatttaa 13703384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 300124 - 300077
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||    
T  300124 agcgataccaattaaatacttaagggaccaaaagagcatttaaacctt 300077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 30864208 - 30864161
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||    
T  30864208 agcgataccaattaaatacttaagggaccaaaagagcatttaaacctt 30864161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 2087801 - 2087761
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  2087801 cgataccaattaaatacttaagagactaaaagaacatttaa 2087761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 60
Target Start/End: Complemental strand, 15271165 - 15271126
Alignment:
Q  21 gataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  15271165 gataccaattaaatacttaagtgaccaaaagaacatttaa 15271126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 22594363 - 22594316
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    ||||||||||| |||||||||||| |||||||||||||||||| ||||    
T  22594363 agcgataccaaataaatacttaagggaccaaaagaacatttaagcctt 22594316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 25825315 - 25825362
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||||||||||||||||| |||||||||||||||| ||||||| ||||    
T  25825315 agcgataccaattaaatagttaagagaccaaaagagcatttaagcctt 25825362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 2221979 - 2222025
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacct 64  Q
    |||||||||||||||||| ||||| |||||||||| |||||||||||    
T  2221979 agcgataccaattaaatagttaagggaccaaaagagcatttaaacct 2222025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 8000805 - 8000851
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacct 64  Q
    |||||| ||||||||||||||||| |||||||||| |||||||||||    
T  8000805 agcgatgccaattaaatacttaagggaccaaaagagcatttaaacct 8000851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 16905300 - 16905255
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacc 63  Q
    ||||||||||| |||||||||||| |||||||||| ||||||||||    
T  16905300 agcgataccaaataaatacttaagggaccaaaagagcatttaaacc 16905255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 2221639 - 2221591
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctta 66  Q
    |||||||||||||||||| ||||| |||||||||| ||||||| |||||    
T  2221639 agcgataccaattaaatagttaagggaccaaaagagcatttaagcctta 2221591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 13089483 - 13089439
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaac 62  Q
    |||||||||||||||||| ||||| |||||||||| |||||||||    
T  13089483 agcgataccaattaaatagttaagggaccaaaagagcatttaaac 13089439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 26060151 - 26060103
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctta 66  Q
    |||||||||||||||||| ||||| |||||||||| ||||||| |||||    
T  26060151 agcgataccaattaaatagttaagggaccaaaagagcatttaagcctta 26060103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 41837073 - 41837113
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  41837073 cgataccaattaaatagttaagggaccaaaagaacatttaa 41837113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 43086900 - 43086940
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  43086900 cgataccaattaaatagttaagggaccaaaagaacatttaa 43086940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 45123265 - 45123217
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctta 66  Q
    |||||||||||||||||| ||||| |||||||||| ||||||| |||||    
T  45123265 agcgataccaattaaatagttaagggaccaaaagagcatttaagcctta 45123217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 22013507 - 22013460
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||||||||||||||||| ||||| |||||||||| ||||||| ||||    
T  22013507 agcgataccaattaaatagttaagggaccaaaagagcatttaagcctt 22013460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 22323957 - 22323996
Alignment:
Q  21 gataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    ||||||||||||||||||||| |||||||||| |||||||    
T  22323957 gataccaattaaatacttaagggaccaaaagagcatttaa 22323996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 60
Target Start/End: Complemental strand, 29090773 - 29090734
Alignment:
Q  21 gataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    ||||||||||||||||||||| || |||||||||||||||    
T  29090773 gataccaattaaatacttaagggatcaaaagaacatttaa 29090734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 40449266 - 40449317
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaaccttataa 69  Q
    |||||||||||||||||||||||| |||||||| | ||||||| ||| ||||    
T  40449266 agcgataccaattaaatacttaagggaccaaaatagcatttaagcctcataa 40449317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 41155027 - 41155074
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||||||||||||||||| ||||| |||||||||| ||||||| ||||    
T  41155027 agcgataccaattaaatagttaagggaccaaaagagcatttaagcctt 41155074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 43273849 - 43273888
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatt 57  Q
    |||||||||||||||||||||||| |||||||||| ||||    
T  43273849 agcgataccaattaaatacttaagggaccaaaagagcatt 43273888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 45466306 - 45466353
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||||||||||||||||| ||||| |||||||||| ||||||| ||||    
T  45466306 agcgataccaattaaatagttaagggaccaaaagagcatttaagcctt 45466353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 761438 - 761396
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  761438 agcgataccaattaaatagttaagggaccaaaagagcatttaa 761396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 3443076 - 3443034
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||||||||| ||||||| || |||||||    
T  3443076 agcgataccaattaaatacttaagggaccaaatgagcatttaa 3443034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 7116517 - 7116475
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  7116517 agcgataccaattaaatagttaagggaccaaaagagcatttaa 7116475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 9739798 - 9739840
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  9739798 agcgataccaattaaatagttaagggaccaaaagagcatttaa 9739840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 11713245 - 11713203
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  11713245 agcgataccaattaaatagttaagggaccaaaagagcatttaa 11713203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 14724632 - 14724674
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  14724632 agcgataccaattaaatagttaagggaccaaaagagcatttaa 14724674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 26060645 - 26060687
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  26060645 agcgataccaattaaataattaagggaccaaaagagcatttaa 26060687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 27786011 - 27785969
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  27786011 agcgataccaattaaatagttaagggaccaaaagagcatttaa 27785969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 27786498 - 27786540
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  27786498 agcgataccaattaaatagttaagggaccaaaagagcatttaa 27786540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 31445714 - 31445672
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  31445714 agcgataccaattaaatagttaagggaccaaaagagcatttaa 31445672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 31988913 - 31988955
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  31988913 agcgataccaattaaatagttaagggaccaaaagagcatttaa 31988955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 41154662 - 41154620
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  41154662 agcgataccaattaaatagttaagggaccaaaagagcatttaa 41154620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 42193824 - 42193782
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  42193824 agcgataccaattaaatagttaagggaccaaaagagcatttaa 42193782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 44978347 - 44978389
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||||||||| || ||||||| |||||||    
T  44978347 agcgataccaattaaatacttaagggatcaaaagagcatttaa 44978389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 11760930 - 11760975
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||||||||||||||| ||||| |||||||||| ||||||| ||||    
T  11760930 cgataccaattaaatagttaagggaccaaaagagcatttaagcctt 11760975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 16906477 - 16906526
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaaccttat 67  Q
    ||||||||||| |||||||| ||| |||||| ||||||||||| ||||||    
T  16906477 agcgataccaaataaatactcaagggaccaagagaacatttaagccttat 16906526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 37035888 - 37035929
Alignment:
Q  26 caattaaatacttaagagaccaaaagaacatttaaaccttat 67  Q
    |||||||||| |||||||||||||||| ||||||| ||||||    
T  37035888 caattaaatagttaagagaccaaaagagcatttaagccttat 37035929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 41658443 - 41658398
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||||||||||||||| ||||| |||||||||| ||||||| ||||    
T  41658443 cgataccaattaaatagttaagggaccaaaagagcatttaagcctt 41658398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 9739319 - 9739279
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||| ||||| |||||||| |||||||||    
T  9739319 cgataccaattaaatagttaagggaccaaaaaaacatttaa 9739279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 9807295 - 9807335
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||| ||||| |||||||||| |||||||    
T  9807295 cgataccaattaaatagttaagggaccaaaagagcatttaa 9807335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 23017203 - 23017243
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    ||||||||| |||||||||||| |||||||||| |||||||    
T  23017203 cgataccaactaaatacttaagggaccaaaagagcatttaa 23017243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 33098985 - 33099025
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||| ||||| |||||||||| |||||||    
T  33098985 cgataccaattaaatagttaagggaccaaaagagcatttaa 33099025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 45123630 - 45123670
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||| ||||| |||||||||| |||||||    
T  45123630 cgataccaattaaatagttaagggaccaaaagagcatttaa 45123670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 1095540 - 1095493
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||    
T  1095540 agcgataccaattaaatacttaagagactaaaagaacatttaagcctt 1095493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 17420674 - 17420632
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  17420674 agcgataccaattaaatacttaagaaaccaaaagaacatttaa 17420632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 1031317 - 1031364
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||||||||||||||||| |||||||||||||||| ||||||| ||||    
T  1031317 agcgataccaattaaatagttaagagaccaaaagagcatttaagcctt 1031364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 7265627 - 7265674
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||||||||||||||||| ||||| |||||||||||||||||| ||||    
T  7265627 agcgataccaattaaatagttaagggaccaaaagaacatttaagcctt 7265674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 435892 - 435934
Alignment:
Q  22 ataccaattaaatacttaagagaccaaaagaacatttaaacct 64  Q
    |||||||||||||| ||||| ||||||||||||||||||||||    
T  435892 ataccaattaaatagttaagggaccaaaagaacatttaaacct 435934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 3721628 - 3721578
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaaaccttataat 70  Q
    ||||| ||||||||||||||||||| ||||||||||||||| ||| |||||    
T  3721628 cgatagcaattaaatacttaagagatcaaaagaacatttaagcctaataat 3721578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 60
Target Start/End: Complemental strand, 4076996 - 4076958
Alignment:
Q  22 ataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  4076996 ataccaattaaatacttaagggaccaaaagaacatttaa 4076958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 14233107 - 14233149
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    ||||||||||||||||||||||||||||||||| | |||||||    
T  14233107 agcgataccaattaaatacttaagagaccaaaatagcatttaa 14233149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 25586752 - 25586794
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    ||||||||||||||||||||| ||||||||||||| |||||||    
T  25586752 agcgataccaattaaatactttagagaccaaaagagcatttaa 25586794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 27121667 - 27121621
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacct 64  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||    
T  27121667 agcgataccaattaaatacttaagggaccaaaaaaacatataaacct 27121621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 28905470 - 28905512
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    ||||||||||| |||||||||||| ||||||||||||||||||    
T  28905470 agcgataccaaataaatacttaagggaccaaaagaacatttaa 28905512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 28941865 - 28941907
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    ||||||||||| |||||||||||| ||||||||||||||||||    
T  28941865 agcgataccaaataaatacttaagggaccaaaagaacatttaa 28941907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 14348983 - 14348938
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacc 63  Q
    |||||||||||||||||| |||||| ||||||||| ||||||||||    
T  14348983 agcgataccaattaaatagttaagaaaccaaaagagcatttaaacc 14348938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 20243409 - 20243368
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaaa 61  Q
    |||||| ||||||||||||||| |||||||||||||||||||    
T  20243409 cgatacaaattaaatacttaagggaccaaaagaacatttaaa 20243368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 39010197 - 39010153
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaac 62  Q
    |||||||||||||||||| |||| ||| |||||||||||||||||    
T  39010197 agcgataccaattaaatatttaaaagatcaaaagaacatttaaac 39010153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 20243865 - 20243912
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    ||||| |||||||||||||||||| |||||||||| ||||||| ||||    
T  20243865 agcgacaccaattaaatacttaagggaccaaaagagcatttaagcctt 20243912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 24100713 - 24100760
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||||||||||||||||| ||||| |||||||||| ||||||| ||||    
T  24100713 agcgataccaattaaatagttaagggaccaaaagagcatttaagcctt 24100760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 43387506 - 43387545
Alignment:
Q  21 gataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||| |||||||||||||||| ||||||||||||||||||    
T  43387506 gatatcaattaaatacttaagggaccaaaagaacatttaa 43387545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 435599 - 435557
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  435599 agcgataccaattaaatagttaagggaccaaaagagcatttaa 435557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 60
Target Start/End: Complemental strand, 5186686 - 5186648
Alignment:
Q  22 ataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||||| |||||||| |||||||||    
T  5186686 ataccaattaaatacttaagggaccaaaataacatttaa 5186648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 5187134 - 5187176
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  5187134 agcgataccaattaaatatttaagggaccaaaagagcatttaa 5187176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 13668522 - 13668564
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||||||||  |||||||||| |||||||    
T  13668522 agcgataccaattaaatacttaatggaccaaaagagcatttaa 13668564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 14347446 - 14347404
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    ||||||||||| |||||||||||| |||||||||| |||||||    
T  14347446 agcgataccaaataaatacttaagggaccaaaagagcatttaa 14347404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 16670041 - 16670083
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  16670041 agcgataccaattaaatagttaagggaccaaaagagcatttaa 16670083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 24099782 - 24099740
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  24099782 agcgataccaattaaatagttaagggaccaaaagagcatttaa 24099740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 27098585 - 27098543
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  27098585 agcgataccaattaaatagttaagggaccaaaagagcatttaa 27098543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 27098956 - 27098998
Alignment:
Q  22 ataccaattaaatacttaagagaccaaaagaacatttaaacct 64  Q
    |||||||||||||| |||||||||||||| | |||||||||||    
T  27098956 ataccaattaaatagttaagagaccaaaatagcatttaaacct 27098998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 27851056 - 27851098
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  27851056 agcgataccaattaaatagttaagggaccaaaagagcatttaa 27851098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 29961855 - 29961813
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  29961855 agcgataccaattaaatagttaagggaccaaaagagcatttaa 29961813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 29962194 - 29962236
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  29962194 agcgataccaattaaatagttaagggaccaaaagagcatttaa 29962236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 30012604 - 30012562
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  30012604 agcgataccaattaaatagttaagggaccaaaagagcatttaa 30012562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 30645740 - 30645782
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    ||||||||||| |||||||||||| |||||||||| |||||||    
T  30645740 agcgataccaaataaatacttaagggaccaaaagagcatttaa 30645782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 35810603 - 35810649
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacct 64  Q
    ||||||||||| |||||||||||  |||||||||| |||||||||||    
T  35810603 agcgataccaactaaatacttaaaggaccaaaagagcatttaaacct 35810649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 38312370 - 38312328
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  38312370 agcgataccaattaaatagttaagggaccaaaagagcatttaa 38312328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 3722098 - 3722143
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacc 63  Q
    |||||||||||||||||| ||||| |||||||| | ||||||||||    
T  3722098 agcgataccaattaaatatttaagggaccaaaaaagcatttaaacc 3722143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 16669551 - 16669502
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaaccttat 67  Q
    |||||||||||||||||| |||||  ||||||||| ||||||| ||||||    
T  16669551 agcgataccaattaaatagttaaggaaccaaaagagcatttaagccttat 16669502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 28904673 - 28904628
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    ||||||||| |||||||||||| |||||||||| ||||||| ||||    
T  28904673 cgataccaaataaatacttaagggaccaaaagagcatttaagcctt 28904628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 28941068 - 28941023
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    ||||||||| |||||||||||| |||||||||| ||||||| ||||    
T  28941068 cgataccaaataaatacttaagggaccaaaagagcatttaagcctt 28941023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 6157512 - 6157552
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||| ||||| |||||||||| |||||||    
T  6157512 cgataccaattaaatagttaagggaccaaaagagcatttaa 6157552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 9050450 - 9050498
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctta 66  Q
    |||||||||||||||||||||||| || |||||||  |||||| |||||    
T  9050450 agcgataccaattaaatacttaagggaacaaaagagaatttaagcctta 9050498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 13824659 - 13824691
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaa 50  Q
    |||||||||||||||||||||||| ||||||||    
T  13824659 agcgataccaattaaatacttaagggaccaaaa 13824691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 27850724 - 27850680
Alignment:
Q  21 gataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    ||||||||||||||| ||||| |||||||||| ||||||| ||||    
T  27850724 gataccaattaaatagttaagggaccaaaagagcatttaagcctt 27850680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 39023495 - 39023451
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaaacct 64  Q
    |||||| |||||||||||||| ||| ||||||| |||||||||||    
T  39023495 cgatacaaattaaatacttaaaagatcaaaagagcatttaaacct 39023451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 28460998 - 28461040
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  28460998 agcgataccaattaaatacttaagggaccaaaagaacatttaa 28461040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 30284238 - 30284281
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaa 61  Q
    |||||||| || ||||||||||||||||||||||||||||||||    
T  30284238 agcgatactaaataaatacttaagagaccaaaagaacatttaaa 30284281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 5905717 - 5905759
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| |||||||||||||||| |||||||    
T  5905717 agcgataccaattaaatagttaagagaccaaaagagcatttaa 5905759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 18458788 - 18458834
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacct 64  Q
    |||||||||||||||||| ||||| |||||||||| |||||||||||    
T  18458788 agcgataccaattaaatagttaagggaccaaaagagcatttaaacct 18458834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 34621798 - 34621840
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||||||||| |||||||||| |||||||    
T  34621798 agcgataccaattaaatacttaagggaccaaaagagcatttaa 34621840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 45995312 - 45995270
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  45995312 agcgataccaattaaatagttaagggaccaaaagaacatttaa 45995270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 38444075 - 38444030
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||||||||||||||||||||| |||||||||| ||||||| ||||    
T  38444075 cgataccaattaaatacttaagggaccaaaagagcatttaagcctt 38444030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 44333044 - 44332999
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacc 63  Q
    |||||||||||||||||||||||  |||||||||| ||||||||||    
T  44333044 agcgataccaattaaatacttaaaggaccaaaagagcatttaaacc 44332999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 48094883 - 48094838
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||||||||||||||| ||||| |||||||||||||||||| ||||    
T  48094883 cgataccaattaaatagttaagggaccaaaagaacatttaagcctt 48094838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 3217275 - 3217227
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctta 66  Q
    |||||||||||||||||| ||||| |||||||||| ||||||| |||||    
T  3217275 agcgataccaattaaatagttaagggaccaaaagagcatttaagcctta 3217227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 5101496 - 5101536
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  5101496 cgataccaattaaatatttaagggaccaaaagaacatttaa 5101536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 8090866 - 8090822
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaac 62  Q
    |||||||||||||||||| ||||| |||||||| |||||||||||    
T  8090866 agcgataccaattaaatagttaagggaccaaaaaaacatttaaac 8090822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 16962889 - 16962841
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctta 66  Q
    ||||||||||| |||||||||||| |||||||||| ||||||| |||||    
T  16962889 agcgataccaaataaatacttaagggaccaaaagagcatttaaccctta 16962841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 28460606 - 28460566
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||||||| |||||||||| |||||||    
T  28460606 cgataccaattaaatacttaagggaccaaaagagcatttaa 28460566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 45456779 - 45456731
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctta 66  Q
    |||||||||||||||||| ||||| |||||||||| ||||||| |||||    
T  45456779 agcgataccaattaaatagttaagggaccaaaagagcatttaagcctta 45456731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 472888 - 472935
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    ||||||||||| |||||||||||| |||||||| | ||||||||||||    
T  472888 agcgataccaaataaatacttaagggaccaaaaaagcatttaaacctt 472935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 712574 - 712527
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||||||||||||||||| ||||| |||||||||| ||||||| ||||    
T  712574 agcgataccaattaaatagttaagggaccaaaagagcatttaagcctt 712527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 20493790 - 20493743
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||||||||||||||||| ||||| |||||||||| ||||||| ||||    
T  20493790 agcgataccaattaaatagttaagggaccaaaagagcatttaagcctt 20493743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 31852095 - 31852142
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||||||||||||||||| ||||| |||||||||| ||||||| ||||    
T  31852095 agcgataccaattaaatagttaagggaccaaaagagcatttaagcctt 31852142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 32072706 - 32072749
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaa 61  Q
    |||||||||||||||||||||||| || ||||||| ||||||||    
T  32072706 agcgataccaattaaatacttaagggatcaaaagagcatttaaa 32072749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 40852173 - 40852220
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||||||||||||||||| ||||| |||||||||| ||||||| ||||    
T  40852173 agcgataccaattaaatagttaagggaccaaaagagcatttaagcctt 40852220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 60
Target Start/End: Complemental strand, 44495745 - 44495706
Alignment:
Q  21 gataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    ||||||||||||||||||||| |||||||||| |||||||    
T  44495745 gataccaattaaatacttaagggaccaaaagagcatttaa 44495706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 45457117 - 45457164
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||||||||||||||||| ||||| |||||||||| ||||||| ||||    
T  45457117 agcgataccaattaaatagttaagggaccaaaagagcatttaagcctt 45457164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 3217767 - 3217809
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  3217767 agcgataccaattaaatagttaagggaccaaaagagcatttaa 3217809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 5905173 - 5905131
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| || |||||||||||||||    
T  5905173 agcgataccaattaaatagttaagggatcaaaagaacatttaa 5905131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 7776502 - 7776460
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    ||||||| |||||||||| ||||| ||||||||||||||||||    
T  7776502 agcgatatcaattaaatagttaagggaccaaaagaacatttaa 7776460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 7776970 - 7777012
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  7776970 agcgataccaattaaatagttaagggaccaaaagagcatttaa 7777012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 13965085 - 13965043
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  13965085 agcgataccaattaaatagttaagggaccaaaagagcatttaa 13965043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 21433061 - 21433103
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||||||||  |||||||||| |||||||    
T  21433061 agcgataccaattaaatacttaatggaccaaaagagcatttaa 21433103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 24733674 - 24733632
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  24733674 agcgataccaattaaatagttaagggaccaaaagagcatttaa 24733632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 27284287 - 27284245
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  27284287 agcgataccaattaaatagttaagggaccaaaagagcatttaa 27284245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 27284622 - 27284664
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  27284622 agcgataccaattaaatagttaagggaccaaaagagcatttaa 27284664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 32072343 - 32072301
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    ||||||| |||||||||||||||| |||||||||| |||||||    
T  32072343 agcgatatcaattaaatacttaagggaccaaaagagcatttaa 32072301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 34620261 - 34620219
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||    
T  34620261 agcgataccaattaaatacgtaagggaccaaaagaatatttaa 34620219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 36721006 - 36721048
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    ||||||| |||||||||||||||| |||||||||| |||||||    
T  36721006 agcgatatcaattaaatacttaagggaccaaaagagcatttaa 36721048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 36951101 - 36951059
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  36951101 agcgataccaattaaatagttaagggaccaaaagagcatttaa 36951059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 37374470 - 37374512
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  37374470 agcgataccaattaaatagttaagggaccaaaagagcatttaa 37374512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 39143524 - 39143566
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  39143524 agcgataccaattaaatagttaagggaccaaaagagcatttaa 39143566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 40851815 - 40851773
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  40851815 agcgataccaattaaatagttaagggaccaaaagagcatttaa 40851773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 42287356 - 42287314
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  42287356 agcgataccaattaaatagttaagggaccaaaagagcatttaa 42287314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 44496091 - 44496129
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacat 56  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  44496091 agcgataccagttaaatacttaagggaccaaaagaacat 44496129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 47987372 - 47987330
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  47987372 agcgataccaattaaatagttaagggaccaaaagagcatttaa 47987330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 751642 - 751597
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacc 63  Q
    ||||||| |||||||||||||||||||  |||||| ||||||||||    
T  751642 agcgatatcaattaaatacttaagagatgaaaagagcatttaaacc 751597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 5101293 - 5101248
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacc 63  Q
    ||||||||||||| |||||||||||||| |||| | ||||||||||    
T  5101293 agcgataccaatttaatacttaagagacaaaaatagcatttaaacc 5101248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 30283961 - 30283916
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    ||||||||| |||||||||||| |||||||||| ||||||| ||||    
T  30283961 cgataccaaataaatacttaagggaccaaaagagcatttaagcctt 30283916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 43704990 - 43704937
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaaccttataatt 71  Q
    |||||||||||||||||| ||||| |||||||| | ||||||| ||| ||||||    
T  43704990 agcgataccaattaaatagttaagggaccaaaaaagcatttaagcctaataatt 43704937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 713077 - 713117
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||| ||||| |||||||||| |||||||    
T  713077 cgataccaattaaataattaagggaccaaaagagcatttaa 713117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 23140268 - 23140312
Alignment:
Q  21 gataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    ||||||||||||||| ||||| |||||||||| ||||||| ||||    
T  23140268 gataccaattaaatagttaagggaccaaaagagcatttaagcctt 23140312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 39143189 - 39143149
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||| ||||| |||||||||| |||||||    
T  39143189 cgataccaattaaatagttaagggaccaaaagagcatttaa 39143149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 41911320 - 41911277
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaac 62  Q
    |||||||||||||||||||||||| ||| |||| |||||||||||    
T  41911320 agcgataccaattaaatacttaag-gactaaaaaaacatttaaac 41911277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 12966243 - 12966285
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  12966243 agcgataccaattaaatacttaagagaccaaaagagcatttaa 12966285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 16329790 - 16329745
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacc 63  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||    
T  16329790 agcgataccaaataaatacttaagagaccaaaagagcatttaaacc 16329745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 4979760 - 4979713
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||||||||| ||||||||||||| |||||||||||||||||| ||||    
T  4979760 agcgataccatttaaatacttaagggaccaaaagaacatttaagcctt 4979713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 4997670 - 4997623
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||||||||| ||||||||||||| |||||||||||||||||| ||||    
T  4997670 agcgataccatttaaatacttaagggaccaaaagaacatttaagcctt 4997623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 5381581 - 5381534
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||||||||||||||||||||||| |||||||||| ||||||| ||||    
T  5381581 agcgataccaattaaatacttaagggaccaaaagagcatttaagcctt 5381534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 9401165 - 9401123
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||||||||| |||||||||| |||||||    
T  9401165 agcgataccaattaaatacttaagggaccaaaagagcatttaa 9401123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 16712860 - 16712902
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||||||||| |||||||||| |||||||    
T  16712860 agcgataccaattaaatacttaagggaccaaaagagcatttaa 16712902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 25334622 - 25334664
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| |||||||||||||||| |||||||    
T  25334622 agcgataccaattaaatagttaagagaccaaaagagcatttaa 25334664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 2804554 - 2804501
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaaccttataatt 71  Q
    |||||||||||||||||||||||| || ||||||| ||||||| ||||| ||||    
T  2804554 agcgataccaattaaatacttaagggatcaaaagagcatttaagccttaaaatt 2804501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 21533044 - 21533089
Alignment:
Q  22 ataccaattaaatacttaagagaccaaaagaacatttaaaccttat 67  Q
    |||||||||||||| ||||| |||||||||| ||||||||||||||    
T  21533044 ataccaattaaatagttaagggaccaaaagagcatttaaaccttat 21533089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 677933 - 677981
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctta 66  Q
    |||||||||||||||||| ||||| ||| |||||||||||||| |||||    
T  677933 agcgataccaattaaatagttaagggactaaaagaacatttaagcctta 677981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 15136396 - 15136348
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctta 66  Q
    |||||||||||||||||| ||||| |||||||||| |||||| ||||||    
T  15136396 agcgataccaattaaatagttaagggaccaaaagagcatttagacctta 15136348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 39107776 - 39107816
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  39107776 cgataccaattaaatagttaagagaccaaaagagcatttaa 39107816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 677429 - 677382
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||||||||||||||||| ||||| |||||||||| ||||||| ||||    
T  677429 agcgataccaattaaatagttaagggaccaaaagagcatttaagcctt 677382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 60
Target Start/End: Complemental strand, 11129924 - 11129885
Alignment:
Q  21 gataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||| ||||||||||||||||||||||| |||||||    
T  11129924 gataccaaataaatacttaagagaccaaaagagcatttaa 11129885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 18064442 - 18064489
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||||||||||||||||||||||| || ||||||| ||||||| ||||    
T  18064442 agcgataccaattaaatacttaagggatcaaaagagcatttaagcctt 18064489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 2822349 - 2822307
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||| |||||||||    
T  2822349 agcgataccaattaaatagttaagggaccaaaaaaacatttaa 2822307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 2970830 - 2970872
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  2970830 agcgataccaattaaatagttaagggaccaaaagagcatttaa 2970872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 3202710 - 3202668
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    ||||||||| |||||||||||||  ||||||||||||||||||    
T  3202710 agcgatacctattaaatacttaaaggaccaaaagaacatttaa 3202668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 60
Target Start/End: Original strand, 3203148 - 3203186
Alignment:
Q  22 ataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||||| ||||||| ||||||||||    
T  3203148 ataccaattaaatacttaagggaccaaatgaacatttaa 3203186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 4602830 - 4602872
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  4602830 agcgataccaattaaatagttaagggaccaaaagagcatttaa 4602872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 4844093 - 4844051
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  4844093 agcgataccaattaaatagttaagggaccaaaagagcatttaa 4844051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 8444997 - 8444955
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||| ||||||||||||||||| |||||||||| |||||||    
T  8444997 agcgatgccaattaaatacttaagggaccaaaagagcatttaa 8444955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 11714010 - 11714052
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    ||||||| |||||||||| ||||| ||||||||||||||||||    
T  11714010 agcgatatcaattaaatagttaagggaccaaaagaacatttaa 11714052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 14287876 - 14287831
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacct 64  Q
    ||||||| ||||||||||||||| ||||||||||| |||||||||||    
T  14287876 agcgatatcaattaaatacttaa-agaccaaaagagcatttaaacct 14287831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 16712482 - 16712440
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||||||||  |||||||||| |||||||    
T  16712482 agcgataccaattaaatacttaaaggaccaaaagagcatttaa 16712440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 17978112 - 17978158
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacct 64  Q
    |||||||||||||||||| ||||  |||||||||| |||||||||||    
T  17978112 agcgataccaattaaatagttaatggaccaaaagagcatttaaacct 17978158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 25882037 - 25882003
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaaga 52  Q
    |||||||||||||||||| ||||||||||||||||    
T  25882037 agcgataccaattaaatagttaagagaccaaaaga 25882003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 26424837 - 26424879
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  26424837 agcgataccaattaaatagttaagggaccaaaagagcatttaa 26424879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 32194487 - 32194445
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  32194487 agcgataccaattaaatagttaagggaccaaaagagcatttaa 32194445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 32194842 - 32194884
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  32194842 agcgataccaattaaatagttaagggaccaaaagagcatttaa 32194884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 38536631 - 38536677
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacct 64  Q
    |||||||||||||||||| ||||| ||||||||||  ||||||||||    
T  38536631 agcgataccaattaaatagttaagggaccaaaagagtatttaaacct 38536677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 5382033 - 5382073
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||| |||||||||||||| || ||||||    
T  5382033 cgataccaattaaatagttaagagaccaaaaaaatatttaa 5382073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 5484957 - 5485001
Alignment:
Q  21 gataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    ||||||||||||||| ||||| |||||||||| ||||||| ||||    
T  5484957 gataccaattaaatagttaagggaccaaaagagcatttaaccctt 5485001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 8885703 - 8885655
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctta 66  Q
    ||||||||||| |||||||||||| ||||||||   |||||||||||||    
T  8885703 agcgataccaaataaatacttaagggaccaaaaacgcatttaaacctta 8885655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 18469636 - 18469596
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||| ||||| |||||||||| |||||||    
T  18469636 cgataccaattaaatagttaagggaccaaaagagcatttaa 18469596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 20558915 - 20558955
Alignment:
Q  25 ccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||| |||||||||||| |||||||||||||||||| ||||    
T  20558915 ccaactaaatacttaagggaccaaaagaacatttaagcctt 20558955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 39109516 - 39109564
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctta 66  Q
    |||||||||||||||||| ||||| |||||| ||| ||||||| |||||    
T  39109516 agcgataccaattaaatagttaagggaccaatagagcatttaagcctta 39109564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 1040152 - 1040194
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  1040152 agcgataccaattaaatatttaagagaccaaaagaacatttaa 1040194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 1047058 - 1047100
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  1047058 agcgataccaattaaatatttaagagaccaaaagaacatttaa 1047100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 7049132 - 7049083
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaaccttat 67  Q
    ||||||| |||||||||||||||| |||||||||||||||||| ||||||    
T  7049132 agcgatatcaattaaatacttaagggaccaaaagaacatttaagccttat 7049083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 5805993 - 5806037
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaaacct 64  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||    
T  5805993 cgataccaaataaatacttaagagaccaaaagagcatttaaacct 5806037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 32319907 - 32319867
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  32319907 cgataccaattaaatacttaagagaccaaaaaaacatttaa 32319867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 24231498 - 24231545
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||||||||||||||||| |||||||||||||||| ||||||| ||||    
T  24231498 agcgataccaattaaatagttaagagaccaaaagagcatttaagcctt 24231545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 16659917 - 16659959
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    ||||||||||| |||||||||||| ||||||||||||||||||    
T  16659917 agcgataccaaataaatacttaagggaccaaaagaacatttaa 16659959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 27526878 - 27526836
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||||||||| |||||||||| |||||||    
T  27526878 agcgataccaattaaatacttaagggaccaaaagagcatttaa 27526836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 28050028 - 28050070
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||||||||| |||||||||| |||||||    
T  28050028 agcgataccaattaaatacttaagggaccaaaagagcatttaa 28050070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 3798369 - 3798320
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaaccttat 67  Q
    |||||||||||||||||| ||||| |||||||||| ||||||| ||||||    
T  3798369 agcgataccaattaaatagttaagggaccaaaagagcatttaagccttat 3798320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 50227927 - 50227976
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaaccttat 67  Q
    |||||||||||||||||| ||||| |||||||||| ||||||| ||||||    
T  50227927 agcgataccaattaaatagttaagggaccaaaagagcatttaagccttat 50227976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 3798723 - 3798775
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaaccttataat 70  Q
    |||||||||||||||||| ||||| |||||||||| ||||||| ||| |||||    
T  3798723 agcgataccaattaaatagttaagggaccaaaagagcatttaagcctaataat 3798775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 50227560 - 50227512
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctta 66  Q
    |||||||||||||||||| ||||| |||||||||| ||||||| |||||    
T  50227560 agcgataccaattaaatagttaagggaccaaaagagcatttaagcctta 50227512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 52179384 - 52179432
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctta 66  Q
    |||||||||||||||||| ||||| |||||||| | |||||||||||||    
T  52179384 agcgataccaattaaatagttaagggaccaaaaaagcatttaaacctta 52179432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 5598563 - 5598516
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||||||||||||||||| ||||| |||||||||| ||||||| ||||    
T  5598563 agcgataccaattaaatagttaagcgaccaaaagagcatttaagcctt 5598516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 5804738 - 5804691
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    ||||||||||| |||||||||||| |||||||||| ||||||| ||||    
T  5804738 agcgataccaaataaatacttaagggaccaaaagagcatttaagcctt 5804691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 14244573 - 14244620
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||||||||||||||||| ||||| |||||||||| ||||||| ||||    
T  14244573 agcgataccaattaaatagttaagggaccaaaagagcatttaagcctt 14244620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 24370160 - 24370113
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||||||||||||||||| ||||| |||||||||| ||||||| ||||    
T  24370160 agcgataccaattaaatagttaagggaccaaaagagcatttaagcctt 24370113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 32320297 - 32320344
Alignment:
Q  18 agcgataccaattaaatac-ttaagagaccaaaagaacatttaaacct 64  Q
    ||||||||||||||||||| ||||| |||||||||| |||||||||||    
T  32320297 agcgataccaattaaatactttaagggaccaaaagagcatttaaacct 32320344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 36967265 - 36967320
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacct-tataattt 72  Q
    |||||||||||||||||| ||||  |||||||||||||||||| ||| ||||||||    
T  36967265 agcgataccaattaaatagttaaaggaccaaaagaacatttaagcctatataattt 36967320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 37483099 - 37483052
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||||||||||||||||| ||||| |||||||||| ||||||| ||||    
T  37483099 agcgataccaattaaatagttaagggaccaaaagagcatttaagcctt 37483052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 38902849 - 38902888
Alignment:
Q  21 gataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    ||||||||||||||| |||||||||||||||| |||||||    
T  38902849 gataccaattaaatagttaagagaccaaaagagcatttaa 38902888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 45678757 - 45678710
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||||||||||||||||| ||||| |||||||||| ||||||| ||||    
T  45678757 agcgataccaattaaatagttaagggaccaaaagagcatttaagcctt 45678710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 1039740 - 1039694
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaaacctta 66  Q
    ||||| ||||||||||||||| ||||||||||| ||||||| |||||    
T  1039740 cgatatcaattaaatacttaaaagaccaaaagagcatttaagcctta 1039694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 1046646 - 1046600
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaaacctta 66  Q
    ||||| ||||||||||||||| ||||||||||| ||||||| |||||    
T  1046646 cgatatcaattaaatacttaaaagaccaaaagagcatttaagcctta 1046600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 6328343 - 6328377
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaaga 52  Q
    |||||||||||||||||||||||| ||||||||||    
T  6328343 agcgataccaattaaatacttaagggaccaaaaga 6328377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 6714716 - 6714758
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  6714716 agcgataccaattaaatagttaagggaccaaaagagcatttaa 6714758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 9478301 - 9478259
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  9478301 agcgataccaattaaatagttaagggaccaaaagagcatttaa 9478259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 10719646 - 10719688
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    ||||||||||| |||||||||||| |||||||||| |||||||    
T  10719646 agcgataccaaataaatacttaagggaccaaaagagcatttaa 10719688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 64
Target Start/End: Complemental strand, 12501382 - 12501340
Alignment:
Q  22 ataccaattaaatacttaagagaccaaaagaacatttaaacct 64  Q
    ||||||||||||||||||||  ||||||||| |||||||||||    
T  12501382 ataccaattaaatacttaaggtaccaaaagatcatttaaacct 12501340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 24381174 - 24381216
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  24381174 agcgataccaattaaataattaagggaccaaaagagcatttaa 24381216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 31488070 - 31488028
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  31488070 agcgataccaattaaatagttaagggaccaaaagagcatttaa 31488028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 33145964 - 33146006
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    ||||||| |||||||||| ||||| ||||||||||||||||||    
T  33145964 agcgatatcaattaaatagttaagggaccaaaagaacatttaa 33146006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 33171856 - 33171894
Alignment:
Q  21 gataccaattaaatacttaagagaccaaaagaacattta 59  Q
    ||||||||||||||||||||| |||||||||| ||||||    
T  33171856 gataccaattaaatacttaagtgaccaaaagagcattta 33171894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 34023587 - 34023633
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacct 64  Q
    |||||||||||||||||| ||||| ||| |||||| |||||||||||    
T  34023587 agcgataccaattaaatagttaagggactaaaagagcatttaaacct 34023633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 35368901 - 35368859
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  35368901 agcgataccaattaaatatttaagggaccaaaagagcatttaa 35368859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 35814409 - 35814451
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    ||||||||||| |||||||||||| |||||||||| |||||||    
T  35814409 agcgataccaagtaaatacttaagggaccaaaagagcatttaa 35814451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 37483556 - 37483598
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  37483556 agcgataccaattaaatagttaagggaccaaaagagcatttaa 37483598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 37708592 - 37708634
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  37708592 agcgataccaattaaatagttaagggaccaaaagagcatttaa 37708634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 38980067 - 38980109
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  38980067 agcgataccaattaaatagttaagggaccaaaagagcatttaa 38980109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 42617206 - 42617248
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    ||||||||||||||||||||||||  ||||||||| |||||||    
T  42617206 agcgataccaattaaatacttaaggaaccaaaagatcatttaa 42617248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 44114531 - 44114573
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  44114531 agcgataccaattaaatagttaagggaccaaaagagcatttaa 44114573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 46448262 - 46448220
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  46448262 agcgataccaattaaatagttaagggaccaaaagagcatttaa 46448220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 48498213 - 48498255
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    ||||||||||||||||||||||||  ||||||||| |||||||    
T  48498213 agcgataccaattaaatacttaaggaaccaaaagagcatttaa 48498255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 49548167 - 49548121
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacct 64  Q
    |||||||||||||||||| ||||| |||||||| | |||||||||||    
T  49548167 agcgataccaattaaatagttaagggaccaaaaaagcatttaaacct 49548121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 50138540 - 50138498
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  50138540 agcgataccaattaaatagttaagggaccaaaagagcatttaa 50138498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 50138883 - 50138925
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  50138883 agcgataccaattaaatagttaagggaccaaaagagcatttaa 50138925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 15073460 - 15073411
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaaccttat 67  Q
    |||||||||||||||||| ||||| || ||||||| ||||||| ||||||    
T  15073460 agcgataccaattaaatagttaagggatcaaaagagcatttaagccttat 15073411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 16659120 - 16659075
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    ||||||||| |||||||||||| |||||||||| ||||||| ||||    
T  16659120 cgataccaaataaatacttaagggaccaaaagagcatttaagcctt 16659075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 31698297 - 31698342
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacc 63  Q
    ||||||||||| |||||| |||||  ||||||||||||||||||||    
T  31698297 agcgataccaaataaatatttaaggaaccaaaagaacatttaaacc 31698342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 34022512 - 34022467
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||||||||||||||| ||| | |||||||||||||||||| ||||    
T  34022512 cgataccaattaaatagttatgggaccaaaagaacatttaagcctt 34022467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 46448754 - 46448810
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaaccttataatttaag 75  Q
    |||||||||||||||||| ||||| ||| |||||| ||||||| ||||| ||||||||    
T  46448754 agcgataccaattaaatagttaagggactaaaagagcatttaagcctta-aatttaag 46448810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 5599050 - 5599090
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||| ||||| |||||||||| |||||||    
T  5599050 cgataccaattaaatagttaagggaccaaaagagcatttaa 5599090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 7121835 - 7121875
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||| ||||| |||||||||| |||||||    
T  7121835 cgataccaattaaatagttaagggaccaaaagagcatttaa 7121875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 7334943 - 7334983
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||| ||||| |||||||||| |||||||    
T  7334943 cgataccaattaaatagttaagggaccaaaagagcatttaa 7334983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 20258011 - 20257971
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||| ||||| |||||||||| |||||||    
T  20258011 cgataccaattaaatagttaagggaccaaaagagcatttaa 20257971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 31488427 - 31488467
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||| ||||| |||||||||| |||||||    
T  31488427 cgataccaattaaatagttaagggaccaaaagagcatttaa 31488467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 36986002 - 36986042
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||| |||||||| ||||||| |||||||    
T  36986002 cgataccaattaaatatttaagagatcaaaagagcatttaa 36986042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 39851556 - 39851596
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||| ||||| |||||||||| |||||||    
T  39851556 cgataccaattaaatagttaagggaccaaaagagcatttaa 39851596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 42616738 - 42616698
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||||||  |||||||||| |||||||    
T  42616738 cgataccaattaaatacttaaaggaccaaaagagcatttaa 42616698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 57571 - 57627
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaaccttataatttaa 74  Q
    |||||||||||||||||| ||||| ||||||||||||| |||| |||| ||||||||    
T  57571 agcgataccaattaaatagttaagggaccaaaagaacaattaagccttttaatttaa 57627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 57067 - 57025
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| ||||||||||||| ||||    
T  57067 agcgataccaattaaatagttaagggaccaaaagaacaattaa 57025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000007; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 8101058 - 8101102
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaaacct 64  Q
    |||||||||||||||||||||||||| |||| |||||||||||||    
T  8101058 cgataccaattaaatacttaagagactaaaaaaacatttaaacct 8101102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 43465136 - 43465180
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaaacct 64  Q
    |||||| || |||||||||||||||||||||||||||||||||||    
T  43465136 cgatactaaataaatacttaagagaccaaaagaacatttaaacct 43465180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 60
Target Start/End: Complemental strand, 48082913 - 48082874
Alignment:
Q  21 gataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  48082913 gataccaattaaatacttaagggaccaaaagaacatttaa 48082874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 40503284 - 40503242
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||||||||| |||||||||| |||||||    
T  40503284 agcgataccaattaaatacttaagggaccaaaagagcatttaa 40503242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 48085252 - 48085294
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||||||||| |||||||||| |||||||    
T  48085252 agcgataccaattaaatacttaagggaccaaaagagcatttaa 48085294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 26247192 - 26247237
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacc 63  Q
    |||||||| || |||||||||||| |||||||||||||||||||||    
T  26247192 agcgatactaaataaatacttaagggaccaaaagaacatttaaacc 26247237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 52255544 - 52255585
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacattta 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  52255544 agcgataccaaataaatacttaagggaccaaaagaacattta 52255585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 24244508 - 24244464
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaaacct 64  Q
    |||||| || |||||||||||| ||||||||||||||||||||||    
T  24244508 cgatactaaataaatacttaagggaccaaaagaacatttaaacct 24244464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 30359325 - 30359364
Alignment:
Q  21 gataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    ||||||||||||||||||||| |||||||||| |||||||    
T  30359325 gataccaattaaatacttaagggaccaaaagagcatttaa 30359364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 32309179 - 32309132
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||||||||||||||||| ||||  |||||||||| ||||||||||||    
T  32309179 agcgataccaattaaatagttaaaggaccaaaagagcatttaaacctt 32309132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 41263556 - 41263603
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacctt 65  Q
    |||||||||||||||||| ||||| |||||||||| ||||||| ||||    
T  41263556 agcgataccaattaaatagttaagggaccaaaagagcatttaagcctt 41263603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 45530034 - 45529995
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatt 57  Q
    ||||||| ||||||||||||||||||||||||||| ||||    
T  45530034 agcgatatcaattaaatacttaagagaccaaaagagcatt 45529995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 876012 - 875970
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  876012 agcgataccaattaaatagttaagggaccaaaagatcatttaa 875970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 967025 - 966983
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  967025 agcgataccaattaaatagttaagggaccaaaagagcatttaa 966983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 6276103 - 6276061
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    ||||||||||| |||||||||||| |||||||||| |||||||    
T  6276103 agcgataccaaataaatacttaagggaccaaaagagcatttaa 6276061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 12739923 - 12739881
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  12739923 agcgataccaattaaatagttaagggaccaaaagagcatttaa 12739881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 12740009 - 12739967
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  12740009 agcgataccaattaaatagttaagggaccaaaagagcatttaa 12739967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 13301969 - 13302011
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    ||||||||||| |||||||||||| |||||||||| |||||||    
T  13301969 agcgataccaaataaatacttaagggaccaaaagagcatttaa 13302011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 13312625 - 13312667
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    ||||||||||| |||||||||||| |||||||||| |||||||    
T  13312625 agcgataccaaataaatacttaagggaccaaaagagcatttaa 13312667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 13355220 - 13355178
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| ||| ||||||||||||||    
T  13355220 agcgataccaattaaatagttaagggactaaaagaacatttaa 13355178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 24243010 - 24243052
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  24243010 agcgataccaattaaatagttaagggaccaaaagagcatttaa 24243052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 28919134 - 28919092
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||||||||  |||||||||| |||||||    
T  28919134 agcgataccaattaaatacttaatcgaccaaaagagcatttaa 28919092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 43464857 - 43464815
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    ||||||||||| |||||||||||| |||||||||| |||||||    
T  43464857 agcgataccaaataaatacttaagggaccaaaagagcatttaa 43464815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 44712078 - 44712120
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  44712078 agcgataccaattaaatatttaagggaccaaaagagcatttaa 44712120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 45940260 - 45940218
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  45940260 agcgataccaattaaatagttaagggaccaaaagagcatttaa 45940218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 50531121 - 50531163
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  50531121 agcgataccaattaaatatttaagggaccaaaagagcatttaa 50531163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 51676149 - 51676191
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  51676149 agcgataccaattaaataattaagggaccaaaagagcatttaa 51676191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 52857298 - 52857340
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    ||||||||||| |||||||||||| |||||||||| |||||||    
T  52857298 agcgataccaaataaatacttaagggaccaaaagagcatttaa 52857340  T

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Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 53228227 - 53228276
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaaccttat 67  Q
    ||||||||||| |||||||||||| ||||||||||  |||||| ||||||    
T  53228227 agcgataccaaataaatacttaagggaccaaaagagtatttaagccttat 53228276  T

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Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 24242491 - 24242451
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||| ||||| |||||||||| |||||||    
T  24242491 cgataccaattaaataattaagggaccaaaagagcatttaa 24242451  T

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Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 26246911 - 26246871
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    ||||||||| |||||||||||| |||||||||| |||||||    
T  26246911 cgataccaaataaatacttaagggaccaaaagatcatttaa 26246871  T

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Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 36174550 - 36174510
Alignment:
Q  21 gataccaattaaatacttaagagaccaaaagaacatttaaa 61  Q
    ||||||||||||||| ||||| |||||||||| ||||||||    
T  36174550 gataccaattaaatagttaagggaccaaaagagcatttaaa 36174510  T

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Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 218178 - 218221
Alignment:
Q  20 cgataccaattaaatacttaagagaccaaaagaacatttaaacc 63  Q
    |||||||||||||||||||||| |||||||||| ||||||||||    
T  218178 cgataccaattaaatacttaagggaccaaaagagcatttaaacc 218221  T

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Target: scaffold0006 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 83058 - 83012
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaaacct 64  Q
    |||||||||||||||||| ||||| |||||||| |||||||||||||    
T  83058 agcgataccaattaaatagttaagggaccaaaataacatttaaacct 83012  T

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Target: scaffold0027 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 60
Target Start/End: Complemental strand, 40134 - 40095
Alignment:
Q  21 gataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    ||||||||||||||||||||| |||||||||| |||||||    
T  40134 gataccaattaaatacttaagggaccaaaagagcatttaa 40095  T

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Target: scaffold0220 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 26008 - 25966
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    ||||||||||| |||||||||||| |||||||||| |||||||    
T  26008 agcgataccaaataaatacttaagggaccaaaagagcatttaa 25966  T

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Target: scaffold0014 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 231271 - 231313
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  231271 agcgataccaattaaatagttaagggaccaaaagagcatttaa 231313  T

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Target: scaffold0005 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 1520 - 1478
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  1520 agcgataccaattaaatagttaagggaccaaaagagcatttaa 1478  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 283187 - 283229
Alignment:
Q  18 agcgataccaattaaatacttaagagaccaaaagaacatttaa 60  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  283187 agcgataccaattaaatagttaagggaccaaaagagcatttaa 283229  T

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