View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4526_low_5 (Length: 251)

Name: NF4526_low_5
Description: NF4526
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4526_low_5
NF4526_low_5
[»] chr1 (91 HSPs)
chr1 (78-146)||(37593676-37593744)
chr1 (82-147)||(34290245-34290310)
chr1 (78-143)||(46252674-46252739)
chr1 (82-147)||(10199404-10199469)
chr1 (82-147)||(7136994-7137059)
chr1 (83-147)||(25479590-25479654)
chr1 (82-142)||(28689448-28689508)
chr1 (82-149)||(6292500-6292567)
chr1 (78-145)||(31517732-31517799)
chr1 (85-147)||(37842354-37842416)
chr1 (80-137)||(8016276-8016333)
chr1 (82-147)||(10854742-10854807)
chr1 (84-149)||(14629964-14630029)
chr1 (98-147)||(26779937-26779986)
chr1 (82-147)||(27140487-27140552)
chr1 (102-147)||(43332493-43332538)
chr1 (83-147)||(4576814-4576878)
chr1 (82-142)||(5886990-5887050)
chr1 (80-147)||(19389910-19389978)
chr1 (100-156)||(26461955-26462011)
chr1 (80-142)||(15784343-15784406)
chr1 (82-141)||(38170686-38170745)
chr1 (80-147)||(38867825-38867892)
chr1 (81-147)||(7218069-7218135)
chr1 (90-148)||(15361048-15361106)
chr1 (82-167)||(30815649-30815738)
chr1 (78-131)||(42397749-42397803)
chr1 (83-125)||(47877140-47877182)
chr1 (102-147)||(5047155-5047200)
chr1 (86-147)||(7262518-7262579)
chr1 (102-143)||(7472324-7472365)
chr1 (98-147)||(12564511-12564560)
chr1 (78-167)||(23373305-23373393)
chr1 (82-147)||(31118052-31118117)
chr1 (82-163)||(48748601-48748682)
chr1 (82-147)||(52190138-52190203)
chr1 (80-147)||(1509959-1510027)
chr1 (78-150)||(4699607-4699679)
chr1 (98-146)||(11893605-11893653)
chr1 (78-166)||(29834897-29834985)
chr1 (83-147)||(30257692-30257756)
chr1 (82-167)||(35707194-35707281)
chr1 (91-139)||(38503470-38503518)
chr1 (78-117)||(3223706-3223745)
chr1 (81-124)||(3224455-3224498)
chr1 (82-149)||(4445715-4445782)
chr1 (83-154)||(4920767-4920838)
chr1 (88-155)||(6279400-6279467)
chr1 (78-149)||(10280656-10280727)
chr1 (77-124)||(10809377-10809424)
chr1 (99-146)||(35590905-35590952)
chr1 (77-147)||(1565526-1565596)
chr1 (98-140)||(11129324-11129366)
chr1 (89-147)||(12564877-12564935)
chr1 (78-120)||(29635383-29635425)
chr1 (82-148)||(43338124-43338190)
chr1 (80-142)||(43722322-43722384)
chr1 (93-147)||(45975699-45975753)
chr1 (104-142)||(51190862-51190900)
chr1 (78-147)||(51695486-51695556)
chr1 (78-167)||(3070082-3070174)
chr1 (78-147)||(3924633-3924702)
chr1 (82-147)||(4202147-4202212)
chr1 (98-147)||(4548730-4548779)
chr1 (83-116)||(4549888-4549921)
chr1 (82-143)||(4622106-4622167)
chr1 (86-147)||(4700066-4700127)
chr1 (78-147)||(4868409-4868478)
chr1 (80-125)||(5276324-5276369)
chr1 (82-147)||(12477283-12477348)
chr1 (82-147)||(12593449-12593514)
chr1 (78-123)||(15579515-15579560)
chr1 (83-144)||(16981933-16981994)
chr1 (82-147)||(24460403-24460468)
chr1 (78-142)||(26185524-26185589)
chr1 (82-147)||(27963366-27963431)
chr1 (90-147)||(28077073-28077130)
chr1 (82-147)||(28909999-28910064)
chr1 (83-140)||(28935873-28935930)
chr1 (90-147)||(32182280-32182337)
chr1 (80-117)||(34278687-34278724)
chr1 (78-147)||(35080061-35080130)
chr1 (82-143)||(35925703-35925764)
chr1 (82-147)||(41195189-41195254)
chr1 (78-147)||(45205077-45205146)
chr1 (80-117)||(47917275-47917312)
chr1 (102-142)||(19092399-19092439)
chr1 (107-147)||(21254768-21254808)
chr1 (81-136)||(27145730-27145785)
chr1 (83-147)||(35017585-35017649)
chr1 (78-147)||(35350645-35350718)
[»] chr8 (52 HSPs)
chr8 (82-167)||(20672739-20672824)
chr8 (79-167)||(33553229-33553317)
chr8 (88-149)||(42215084-42215145)
chr8 (78-149)||(30191133-30191204)
chr8 (105-154)||(11494148-11494197)
chr8 (78-125)||(13000416-13000463)
chr8 (79-146)||(21653091-21653158)
chr8 (78-124)||(2594989-2595035)
chr8 (101-147)||(4762518-4762564)
chr8 (88-149)||(11493972-11494033)
chr8 (82-147)||(11569453-11569518)
chr8 (80-148)||(25869260-25869328)
chr8 (78-142)||(39866726-39866790)
chr8 (80-167)||(14949855-14949942)
chr8 (104-147)||(27028840-27028883)
chr8 (85-124)||(30389131-30389170)
chr8 (86-149)||(33714236-33714299)
chr8 (80-147)||(38421273-38421340)
chr8 (112-167)||(40280253-40280308)
chr8 (82-125)||(41606899-41606942)
chr8 (82-149)||(42215302-42215369)
chr8 (83-129)||(3600735-3600781)
chr8 (83-129)||(14339602-14339648)
chr8 (78-147)||(779053-779122)
chr8 (78-123)||(4281579-4281624)
chr8 (78-147)||(30918122-30918190)
chr8 (78-122)||(32840977-32841022)
chr8 (78-147)||(41620283-41620352)
chr8 (98-147)||(44236835-44236884)
chr8 (83-147)||(2235653-2235717)
chr8 (91-147)||(9956819-9956875)
chr8 (78-146)||(12224891-12224959)
chr8 (83-147)||(27754413-27754477)
chr8 (82-149)||(9540992-9541059)
chr8 (86-149)||(10075551-10075614)
chr8 (82-153)||(12851179-12851250)
chr8 (84-147)||(28769337-28769400)
chr8 (83-149)||(28784793-28784858)
chr8 (85-147)||(29059795-29059857)
chr8 (83-147)||(1930044-1930109)
chr8 (80-125)||(3161617-3161662)
chr8 (82-147)||(5069706-5069771)
chr8 (78-147)||(7918438-7918507)
chr8 (102-147)||(7918789-7918834)
chr8 (82-147)||(37353245-37353310)
chr8 (78-147)||(39551201-39551270)
chr8 (78-147)||(43504760-43504829)
chr8 (83-131)||(11000573-11000621)
chr8 (82-146)||(11795102-11795166)
chr8 (82-150)||(31168020-31168088)
chr8 (79-147)||(31862502-31862570)
chr8 (84-144)||(42370359-42370419)
[»] chr7 (49 HSPs)
chr7 (78-167)||(7244669-7244758)
chr7 (82-165)||(22551401-22551484)
chr7 (78-147)||(12110369-12110438)
chr7 (83-156)||(48917341-48917416)
chr7 (102-149)||(12792579-12792626)
chr7 (70-147)||(529384-529461)
chr7 (80-166)||(34035907-34035994)
chr7 (78-147)||(46825107-46825178)
chr7 (98-147)||(25596042-25596091)
chr7 (82-154)||(6552288-6552360)
chr7 (82-167)||(43250695-43250782)
chr7 (83-147)||(44151477-44151541)
chr7 (80-142)||(21247939-21248002)
chr7 (78-125)||(46082067-46082114)
chr7 (78-125)||(47134749-47134796)
chr7 (81-147)||(4966165-4966231)
chr7 (78-124)||(11048059-11048105)
chr7 (78-136)||(25670578-25670636)
chr7 (78-147)||(9423586-9423655)
chr7 (104-149)||(12792642-12792687)
chr7 (86-147)||(24363601-24363662)
chr7 (83-143)||(29286804-29286864)
chr7 (78-150)||(30316968-30317040)
chr7 (102-149)||(12792514-12792561)
chr7 (78-117)||(20888386-20888425)
chr7 (82-141)||(35267377-35267436)
chr7 (80-131)||(44808183-44808234)
chr7 (104-167)||(5017958-5018023)
chr7 (78-120)||(36537944-36537986)
chr7 (88-167)||(42656482-42656563)
chr7 (82-124)||(43219640-43219682)
chr7 (82-147)||(9038121-9038185)
chr7 (78-123)||(15740403-15740448)
chr7 (102-147)||(18962588-18962633)
chr7 (102-147)||(18965726-18965771)
chr7 (98-147)||(27378840-27378889)
chr7 (78-147)||(33645953-33646021)
chr7 (78-147)||(45859519-45859587)
chr7 (102-147)||(46104583-46104628)
chr7 (86-147)||(47559601-47559662)
chr7 (106-167)||(3836702-3836765)
chr7 (78-122)||(6226148-6226192)
chr7 (89-149)||(7623145-7623205)
chr7 (78-122)||(9872906-9872950)
chr7 (98-166)||(33601127-33601195)
chr7 (83-142)||(33871265-33871322)
chr7 (88-120)||(35007633-35007665)
chr7 (83-147)||(39345480-39345544)
chr7 (78-118)||(39539773-39539813)
[»] chr6 (49 HSPs)
chr6 (82-147)||(33887839-33887904)
chr6 (78-150)||(4420649-4420721)
chr6 (82-147)||(6647396-6647461)
chr6 (80-131)||(6536972-6537023)
chr6 (80-130)||(9027604-9027654)
chr6 (82-140)||(13908479-13908537)
chr6 (85-167)||(31583668-31583750)
chr6 (78-147)||(2112209-2112278)
chr6 (106-167)||(2205610-2205671)
chr6 (78-147)||(3528812-3528881)
chr6 (78-147)||(30863255-30863324)
chr6 (103-154)||(26694880-26694931)
chr6 (102-147)||(835265-835310)
chr6 (82-147)||(5564124-5564189)
chr6 (78-147)||(7931718-7931787)
chr6 (78-147)||(10616533-10616602)
chr6 (78-147)||(20368172-20368241)
chr6 (102-147)||(27894055-27894100)
chr6 (82-147)||(31624099-31624164)
chr6 (82-147)||(32386559-32386624)
chr6 (78-147)||(34403864-34403933)
chr6 (78-143)||(34939526-34939591)
chr6 (78-150)||(2455816-2455888)
chr6 (88-148)||(17241254-17241314)
chr6 (83-147)||(19275633-19275697)
chr6 (99-147)||(20370892-20370940)
chr6 (98-146)||(20512656-20512704)
chr6 (78-150)||(29837077-29837148)
chr6 (78-122)||(33832265-33832309)
chr6 (83-122)||(821833-821872)
chr6 (80-147)||(8364970-8365037)
chr6 (78-125)||(31420976-31421023)
chr6 (82-145)||(34939755-34939818)
chr6 (79-145)||(281841-281907)
chr6 (82-124)||(696634-696676)
chr6 (79-164)||(10031723-10031809)
chr6 (83-125)||(29296292-29296334)
chr6 (109-147)||(31812036-31812074)
chr6 (80-117)||(733171-733208)
chr6 (102-147)||(1497990-1498035)
chr6 (78-123)||(1575928-1575973)
chr6 (102-147)||(13907856-13907901)
chr6 (84-125)||(27909636-27909677)
chr6 (104-149)||(32387073-32387118)
chr6 (82-147)||(33089515-33089580)
chr6 (82-138)||(7785740-7785796)
chr6 (82-150)||(11600870-11600938)
chr6 (91-147)||(13907594-13907650)
chr6 (78-142)||(32577978-32578042)
[»] chr3 (76 HSPs)
chr3 (82-137)||(36139897-36139952)
chr3 (82-137)||(36101587-36101642)
chr3 (80-147)||(36887513-36887580)
chr3 (82-147)||(21367676-21367742)
chr3 (102-167)||(16790394-16790459)
chr3 (78-147)||(37273143-37273212)
chr3 (82-142)||(23808060-23808120)
chr3 (82-150)||(54837030-54837098)
chr3 (84-147)||(20669181-20669244)
chr3 (84-143)||(33883748-33883807)
chr3 (78-141)||(42745053-42745116)
chr3 (82-149)||(52440658-52440725)
chr3 (77-147)||(39602201-39602271)
chr3 (85-147)||(40665438-40665500)
chr3 (82-147)||(24785214-24785279)
chr3 (78-147)||(30573906-30573975)
chr3 (100-149)||(34924552-34924601)
chr3 (78-147)||(52619012-52619081)
chr3 (78-142)||(36200110-36200174)
chr3 (82-150)||(45541577-45541645)
chr3 (78-125)||(3044251-3044298)
chr3 (83-154)||(45432936-45433007)
chr3 (88-147)||(53736122-53736181)
chr3 (104-150)||(2825153-2825199)
chr3 (101-147)||(20502083-20502129)
chr3 (83-148)||(36878753-36878819)
chr3 (98-147)||(2719477-2719526)
chr3 (82-147)||(8933796-8933861)
chr3 (80-125)||(25925773-25925818)
chr3 (83-147)||(35394494-35394559)
chr3 (82-167)||(37825111-37825196)
chr3 (81-138)||(47249481-47249538)
chr3 (78-139)||(47513670-47513731)
chr3 (78-147)||(50600170-50600239)
chr3 (98-166)||(12985357-12985425)
chr3 (98-146)||(13371127-13371175)
chr3 (91-147)||(26320107-26320163)
chr3 (98-158)||(26478943-26479003)
chr3 (78-142)||(29771852-29771916)
chr3 (84-147)||(33965486-33965550)
chr3 (78-118)||(41724250-41724290)
chr3 (80-147)||(1816592-1816659)
chr3 (107-166)||(13413920-13413979)
chr3 (90-149)||(25453863-25453922)
chr3 (98-149)||(34414796-34414847)
chr3 (82-125)||(36445856-36445899)
chr3 (78-125)||(43115087-43115134)
chr3 (84-147)||(51130759-51130822)
chr3 (82-124)||(5391911-5391953)
chr3 (82-124)||(5396229-5396271)
chr3 (82-124)||(39723236-39723278)
chr3 (101-147)||(41633369-41633415)
chr3 (173-219)||(49465780-49465826)
chr3 (82-147)||(1217796-1217861)
chr3 (109-150)||(14145918-14145959)
chr3 (98-147)||(20170720-20170769)
chr3 (78-147)||(21574499-21574568)
chr3 (98-147)||(34382951-34383000)
chr3 (82-146)||(34610801-34610866)
chr3 (84-125)||(34954113-34954154)
chr3 (85-146)||(41671320-41671381)
chr3 (98-167)||(46407906-46407975)
chr3 (82-147)||(54180776-54180841)
chr3 (78-146)||(482784-482852)
chr3 (103-147)||(2071065-2071109)
chr3 (83-147)||(2128255-2128319)
chr3 (84-136)||(5166343-5166395)
chr3 (84-128)||(11040612-11040656)
chr3 (83-131)||(20195030-20195077)
chr3 (88-144)||(21862177-21862233)
chr3 (98-146)||(23793594-23793642)
chr3 (91-147)||(25447250-25447305)
chr3 (80-147)||(33405160-33405228)
chr3 (102-150)||(37138296-37138344)
chr3 (79-147)||(48048975-48049043)
chr3 (82-142)||(50952347-50952407)
[»] chr4 (55 HSPs)
chr4 (84-154)||(28300297-28300367)
chr4 (82-147)||(23819098-23819163)
chr4 (103-147)||(47800632-47800676)
chr4 (78-147)||(2996582-2996651)
chr4 (78-147)||(4471177-4471246)
chr4 (90-147)||(17884077-17884134)
chr4 (82-167)||(21043231-21043316)
chr4 (82-147)||(29263379-29263444)
chr4 (90-147)||(47145971-47146028)
chr4 (82-147)||(52746836-52746901)
chr4 (98-147)||(53673670-53673719)
chr4 (103-166)||(4500836-4500899)
chr4 (80-147)||(46019623-46019690)
chr4 (102-149)||(51630118-51630165)
chr4 (85-147)||(7694009-7694071)
chr4 (85-127)||(24747348-24747390)
chr4 (86-147)||(4798566-4798627)
chr4 (103-156)||(18011871-18011924)
chr4 (98-147)||(18628555-18628604)
chr4 (82-167)||(35743271-35743356)
chr4 (78-147)||(40532586-40532655)
chr4 (98-167)||(5131262-5131335)
chr4 (82-146)||(44249295-44249359)
chr4 (82-125)||(1137743-1137786)
chr4 (83-122)||(8469374-8469413)
chr4 (98-165)||(25548140-25548207)
chr4 (82-147)||(42641635-42641702)
chr4 (82-125)||(43824314-43824357)
chr4 (78-117)||(46401303-46401342)
chr4 (88-147)||(55084483-55084542)
chr4 (81-147)||(825485-825551)
chr4 (109-147)||(2111073-2111111)
chr4 (78-124)||(4691880-4691926)
chr4 (109-147)||(29778804-29778842)
chr4 (105-147)||(30631248-30631290)
chr4 (78-154)||(53155265-53155338)
chr4 (102-147)||(3155612-3155657)
chr4 (102-143)||(14011247-14011288)
chr4 (104-141)||(30377433-30377470)
chr4 (102-147)||(35290203-35290248)
chr4 (84-125)||(42461282-42461323)
chr4 (85-154)||(43932437-43932506)
chr4 (80-117)||(46201387-46201424)
chr4 (78-147)||(46415784-46415853)
chr4 (100-145)||(47118979-47119024)
chr4 (98-147)||(49219148-49219197)
chr4 (82-147)||(52735131-52735195)
chr4 (78-146)||(488118-488186)
chr4 (98-142)||(2592321-2592365)
chr4 (78-146)||(2874616-2874684)
chr4 (102-142)||(17751160-17751200)
chr4 (79-147)||(19250555-19250623)
chr4 (83-123)||(48719388-48719428)
chr4 (78-125)||(50569321-50569369)
chr4 (98-142)||(53792585-53792629)
[»] chr2 (70 HSPs)
chr2 (85-147)||(35379015-35379077)
chr2 (83-149)||(44443328-44443394)
chr2 (78-147)||(14666557-14666626)
chr2 (78-147)||(34652028-34652097)
chr2 (78-143)||(43199776-43199841)
chr2 (82-149)||(680510-680577)
chr2 (82-153)||(12313169-12313240)
chr2 (80-147)||(43910993-43911060)
chr2 (104-147)||(43985021-43985064)
chr2 (78-147)||(9174824-9174894)
chr2 (104-154)||(9595260-9595310)
chr2 (78-147)||(1056121-1056190)
chr2 (101-166)||(3227698-3227763)
chr2 (82-147)||(29316771-29316836)
chr2 (83-147)||(16867748-16867812)
chr2 (78-153)||(15120186-15120261)
chr2 (78-125)||(41809237-41809284)
chr2 (82-149)||(41817175-41817242)
chr2 (78-147)||(26143631-26143701)
chr2 (77-147)||(33942159-33942229)
chr2 (89-147)||(38078413-38078471)
chr2 (78-124)||(44606102-44606148)
chr2 (78-147)||(1939324-1939393)
chr2 (103-156)||(3067396-3067449)
chr2 (82-147)||(7871652-7871717)
chr2 (82-147)||(8017443-8017508)
chr2 (84-149)||(9530726-9530791)
chr2 (78-147)||(32821818-32821887)
chr2 (78-147)||(33941918-33941987)
chr2 (78-147)||(43065442-43065511)
chr2 (78-147)||(43141880-43141949)
chr2 (98-146)||(656789-656837)
chr2 (80-140)||(1893275-1893335)
chr2 (69-125)||(12147488-12147544)
chr2 (93-149)||(12464480-12464536)
chr2 (79-147)||(35485926-35485994)
chr2 (104-147)||(1810673-1810716)
chr2 (91-138)||(7928304-7928351)
chr2 (86-125)||(8820292-8820331)
chr2 (84-147)||(10563556-10563619)
chr2 (98-141)||(12464679-12464722)
chr2 (78-117)||(30538165-30538204)
chr2 (111-154)||(36863650-36863693)
chr2 (82-149)||(42420004-42420071)
chr2 (82-147)||(1625909-1625975)
chr2 (78-164)||(7282988-7283074)
chr2 (83-125)||(11063519-11063561)
chr2 (101-147)||(15977994-15978040)
chr2 (82-147)||(26626882-26626948)
chr2 (85-147)||(35378531-35378593)
chr2 (83-157)||(35993377-35993451)
chr2 (82-147)||(40682390-40682455)
chr2 (82-164)||(41144202-41144284)
chr2 (101-147)||(44590043-44590089)
chr2 (104-149)||(1056371-1056416)
chr2 (78-147)||(8187445-8187514)
chr2 (78-146)||(11488287-11488353)
chr2 (77-149)||(16398121-16398194)
chr2 (86-147)||(19333325-19333386)
chr2 (78-154)||(30552635-30552712)
chr2 (78-123)||(32614940-32614985)
chr2 (82-147)||(33256749-33256814)
chr2 (78-147)||(36415666-36415734)
chr2 (82-147)||(40158727-40158792)
chr2 (78-147)||(42817368-42817437)
chr2 (106-147)||(44644287-44644328)
chr2 (78-123)||(45314901-45314946)
chr2 (82-150)||(6772516-6772584)
chr2 (103-147)||(24097817-24097861)
chr2 (80-144)||(43635095-43635159)
[»] chr5 (55 HSPs)
chr5 (82-147)||(17258879-17258944)
chr5 (83-147)||(11707064-11707128)
chr5 (80-167)||(12242704-12242791)
chr5 (78-153)||(37611207-37611282)
chr5 (78-153)||(37787937-37788012)
chr5 (78-155)||(10125710-10125787)
chr5 (82-147)||(13604845-13604910)
chr5 (82-147)||(36639531-36639596)
chr5 (78-145)||(12459993-12460060)
chr5 (78-147)||(7674657-7674726)
chr5 (78-147)||(10272423-10272492)
chr5 (78-147)||(17368685-17368754)
chr5 (91-147)||(4014429-4014485)
chr5 (82-142)||(12521542-12521602)
chr5 (82-154)||(32408588-32408660)
chr5 (83-147)||(33533536-33533600)
chr5 (78-125)||(12467164-12467211)
chr5 (80-147)||(25461310-25461377)
chr5 (80-167)||(985600-985689)
chr5 (82-147)||(9202743-9202809)
chr5 (82-123)||(499727-499768)
chr5 (78-147)||(2092537-2092606)
chr5 (82-147)||(2568667-2568732)
chr5 (98-147)||(7319020-7319069)
chr5 (78-135)||(8089957-8090014)
chr5 (82-147)||(18543193-18543257)
chr5 (98-147)||(18906351-18906400)
chr5 (82-147)||(21768193-21768258)
chr5 (82-147)||(26209409-26209474)
chr5 (82-147)||(41957447-41957512)
chr5 (83-147)||(5284445-5284509)
chr5 (91-147)||(7984978-7985034)
chr5 (98-146)||(38104869-38104917)
chr5 (97-145)||(38829647-38829695)
chr5 (93-147)||(3237102-3237156)
chr5 (93-147)||(7907890-7907944)
chr5 (82-144)||(32545046-32545108)
chr5 (82-147)||(39105473-39105539)
chr5 (82-123)||(1899187-1899228)
chr5 (78-123)||(11700370-11700415)
chr5 (98-147)||(12425580-12425629)
chr5 (78-147)||(32172662-32172731)
chr5 (80-141)||(32194073-32194134)
chr5 (78-147)||(32897466-32897535)
chr5 (84-125)||(35963272-35963313)
chr5 (82-167)||(36774703-36774788)
chr5 (98-147)||(39594816-39594865)
chr5 (98-142)||(1465032-1465076)
chr5 (82-138)||(8177528-8177584)
chr5 (85-125)||(10303827-10303867)
chr5 (82-154)||(13264101-13264172)
chr5 (105-149)||(18637039-18637083)
chr5 (105-149)||(19460405-19460449)
chr5 (98-146)||(20028502-20028550)
chr5 (102-167)||(29116966-29117033)
[»] scaffold0147 (2 HSPs)
scaffold0147 (78-142)||(4927-4991)
scaffold0147 (78-140)||(12696-12758)
[»] scaffold0089 (1 HSPs)
scaffold0089 (98-146)||(33639-33687)
[»] scaffold0311 (1 HSPs)
scaffold0311 (78-133)||(10609-10664)
[»] scaffold0011 (1 HSPs)
scaffold0011 (100-152)||(14614-14666)


Alignment Details
Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 91)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 37593676 - 37593744
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 146  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||| |||||| |||||||||||||    
T  37593676 acaacttatgacatgttcataagctgttttcagcttattttcataagctcttcaaaatagcttatgaaa 37593744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 34290310 - 34290245
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||| |||| |||||||||||||||||||||||||||  |||||||||||||||||||||    
T  34290310 cttatgacatattcataagttgttttcagcttattttcataagttcttcaagatagcttatgaaaa 34290245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 143
Target Start/End: Original strand, 46252674 - 46252739
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatg 143  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||| || ||||||||||||||    
T  46252674 acaacttatgacatgttcataagttgttttcaggttattttcataagctctccaagatagcttatg 46252739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 10199404 - 10199469
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||  || ||||||||||||||    
T  10199404 cttatgacatgttcataagttgttttcagcttattttcataagctctctaaaatagcttatgaaaa 10199469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 7136994 - 7137059
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||| |||| ||||| |||||||||||||||||||||  || ||||||||||||||||||    
T  7136994 cttatgacatattcataagttattttcagcttattttcataagttctccaagatagcttatgaaaa 7137059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 25479654 - 25479590
Alignment:
Q  83 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||||  ||||||||||||||||||||||||||| ||  | |||||||||||||||    
T  25479654 ttatgacatgttcattagttgttttcagcttattttcataagctctctaggatagcttatgaaaa 25479590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 142
Target Start/End: Original strand, 28689448 - 28689508
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat 142  Q
    |||||||||||| || ||||||||||||||||||||||||||||  | |||||||||||||    
T  28689448 cttatgacatgtccataagttgttttcagcttattttcataagctttccaagatagcttat 28689508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 82 - 149
Target Start/End: Complemental strand, 6292567 - 6292500
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 149  Q
    ||||||||||||||| ||| |||||||||||||||||||||||| || ||| |||| ||| |||||||    
T  6292567 cttatgacatgttcataagctgttttcagcttattttcataagctctccaaaatagtttacgaaaata 6292500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 145
Target Start/End: Original strand, 31517732 - 31517799
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaa 145  Q
    |||||| |||||||||||| ||| |||||||||||||||||||||||| || ||||| || |||||||    
T  31517732 acaactcatgacatgttcataagctgttttcagcttattttcataagctctccaagacagattatgaa 31517799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 147
Target Start/End: Original strand, 37842354 - 37842416
Alignment:
Q  85 atgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||| |||  |||||||||||||||| |||||  |||||||||||||||||||||    
T  37842354 atgacatgttcataagcagttttcagcttatttttataagttcttcaagatagcttatgaaaa 37842416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 137
Target Start/End: Complemental strand, 8016333 - 8016276
Alignment:
Q  80 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatag 137  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||| || ||||||||    
T  8016333 aacttatgacatgttcataacttgttttcagcttattttcctaagctctccaagatag 8016276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 10854807 - 10854742
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||||||||| |||||||||||||||||| |||||  |||| |||||  ||||||||    
T  10854807 cttatgacatgttcacaagctgttttcagcttattttcttaagctgttcaggatagtatatgaaaa 10854742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 14629964 - 14630029
Alignment:
Q  84 tatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 149  Q
    ||||| ||||||| |||||||||||||||||||| |||||   || ||||||||||||||||||||    
T  14629964 tatgatatgttcataagttgttttcagcttatttccataaagtctccaagatagcttatgaaaata 14630029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 26779937 - 26779986
Alignment:
Q  98 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||| ||||||||||||||  |||||||||||||||||||||    
T  26779937 aagttgttttcaacttattttcataagttcttcaagatagcttatgaaaa 26779986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 27140552 - 27140487
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||| || |||||||||||||||||||| ||||||| || || |||||||||| ||||    
T  27140552 cttatgacatgtccataagttgttttcagcttatttgcataagctctccatgatagcttataaaaa 27140487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 43332538 - 43332493
Alignment:
Q  102 tgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||    
T  43332538 tgttttcagcttattttaataagctcttcaagatagcttatgaaaa 43332493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 4576878 - 4576814
Alignment:
Q  83 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||| | ||||||| |||||||||||||||||||   ||||| ||||||||||||||    
T  4576878 ttatgacatgtttataagttgtgttcagcttattttcataagttattcaatatagcttatgaaaa 4576814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 142
Target Start/End: Original strand, 5886990 - 5887050
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat 142  Q
    ||||||||||||||| |||||||||||||||||||||| ||||  || |||||| ||||||    
T  5886990 cttatgacatgttcataagttgttttcagcttattttcgtaagttctccaagatggcttat 5887050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 19389978 - 19389910
Alignment:
Q  80 aacttatgacatgttcacaagttgttttc-agcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||| ||||||| ||||||||||  |||||||||||| |||| || ||||||||||||||||||    
T  19389978 aacttatgatatgttcataagttgttttttagcttattttcacaagctctccaagatagcttatgaaaa 19389910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 26461955 - 26462011
Alignment:
Q  100 gttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaac 156  Q
    |||||||||||||||||||||||||| || || ||||||||||||| || |||||||    
T  26461955 gttgttttcagcttattttcataagctctgcaggatagcttatgaagatgatttaac 26462011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 142
Target Start/End: Complemental strand, 15784406 - 15784343
Alignment:
Q  80 aacttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttat 142  Q
    |||||||||||| |||||||||||||||| |||||||||||| |||  || |||||||||||||    
T  15784406 aacttatgacattgttcacaagttgtttttagcttattttcacaagttctccaagatagcttat 15784343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 141
Target Start/End: Original strand, 38170686 - 38170745
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagctta 141  Q
    ||||||||||||||| |||||||||||||||| ||||| ||||| ||||||  |||||||    
T  38170686 cttatgacatgttcataagttgttttcagcttgttttcctaagctcttcaaattagctta 38170745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 38867825 - 38867892
Alignment:
Q  80 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||| |||| ||  ||||||||| ||||||||||||||||  |||||||||| ||||||||||    
T  38867825 aacttatgatatgtccatcagttgtttttagcttattttcataagttcttcaagataacttatgaaaa 38867892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 147
Target Start/End: Original strand, 7218069 - 7218135
Alignment:
Q  81 acttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||| ||||||||| |||||||| ||||||||||||||  || || ||||| |||||||||    
T  7218069 acttatgacacgttcacaagctgttttcaacttattttcataagttctccaggataggttatgaaaa 7218135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 15361106 - 15361048
Alignment:
Q  90 atgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaat 148  Q
    ||||||| |||||||||||||||||||||||||||| || || ||||||  ||||||||    
T  15361106 atgttcataagttgttttcagcttattttcataagctctccaggatagccaatgaaaat 15361048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 167
Target Start/End: Original strand, 30815649 - 30815738
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagct-----tatgaaaataatttaactttattttatc 167  Q
    ||||||||||||||| ||  |||||||||||||||||||||||  |||||| | ||||     |||||||||| |||||||||||||||||    
T  30815649 cttatgacatgttcataaaatgttttcagcttattttcataagttcttcaaca-agctacttatatgaaaatagtttaactttattttatc 30815738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 42397803 - 42397749
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagctt-attttcataagcacttca 131  Q
    |||||||||| |||||||| |||||||||||||||| |||| |||||||||||||    
T  42397803 acaacttatggcatgttcataagttgttttcagcttaatttccataagcacttca 42397749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 125
Target Start/End: Complemental strand, 47877182 - 47877140
Alignment:
Q  83 ttatgacatgttcacaagttgttttcagcttattttcataagc 125  Q
    |||||||||| ||| ||||||||||||||||||||||||||||    
T  47877182 ttatgacatgctcataagttgttttcagcttattttcataagc 47877140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 5047200 - 5047155
Alignment:
Q  102 tgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||||||| ||||||| ||||| |||||||||||||||    
T  5047200 tgttttcagcttatttccataagctcttcatgatagcttatgaaaa 5047155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 7262518 - 7262579
Alignment:
Q  86 tgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||| ||| |||||||| ||||||| || |||| ||||| |||||||||||||||    
T  7262518 tgacatgttcataagctgttttcaccttatttccacaagctcttcaggatagcttatgaaaa 7262579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 143
Target Start/End: Complemental strand, 7472365 - 7472324
Alignment:
Q  102 tgttttcagcttattttcataagcacttcaagatagcttatg 143  Q
    |||||||||||||||||||||||| || ||||||||||||||    
T  7472365 tgttttcagcttattttcataagctctccaagatagcttatg 7472324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 12564511 - 12564560
Alignment:
Q  98 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||||||||||| ||||||  || ||||||||||||||||||    
T  12564511 aagttgttttcagcttatttccataagttctccaagatagcttatgaaaa 12564560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 167
Target Start/End: Original strand, 23373305 - 23373393
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 167  Q
    |||||||||||||||| ||||  | |||||||||||||||   ||||| ||||| ||||||||||||||| |  || |||||||||||||    
T  23373305 acaacttatgacatgtccacatct-gttttcagcttatttctgtaagctcttcaggatagcttatgaaaacagattgactttattttatc 23373393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 31118117 - 31118052
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||||||  ||||||||||||||||||| ||||||  | ||| | |||||||||||||    
T  31118117 cttatgacatgttcatcagttgttttcagcttatttccataagttcatcagggtagcttatgaaaa 31118052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 163
Target Start/End: Original strand, 48748601 - 48748682
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattt 163  Q
    |||||||||||| || ||||| | || ||||||||  ||||| |  | |||||||||||||||||| |||||||||||||||    
T  48748601 cttatgacatgtccataagttatgtttagcttattaccataaactgtccaagatagcttatgaaaacaatttaactttattt 48748682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 52190203 - 52190138
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||| || ||||||  ||||||||||||||||| ||||| || || |||||||||||||||    
T  52190203 cttatgacaagtccacaagccgttttcagcttattttcgtaagctctccatgatagcttatgaaaa 52190138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 1509959 - 1510027
Alignment:
Q  80 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttc-aagatagcttatgaaaa 147  Q
    |||||||||||||||||  || ||||||||||||||||||||||  ||| | ||||||| |||||||||    
T  1509959 aacttatgacatgttcattagctgttttcagcttattttcataaatactcctaagataggttatgaaaa 1510027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 150
Target Start/End: Original strand, 4699607 - 4699679
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataa 150  Q
    ||||||||||||||||||| ||| |||||| |||||||||  |||||| || |  ||||| ||||||||||||    
T  4699607 acaacttatgacatgttcataagctgtttttagcttatttctataagctctccgggatagtttatgaaaataa 4699679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 11893605 - 11893653
Alignment:
Q  98 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 146  Q
    |||||||||||||||||||| ||||| | |||||| |||||||||||||    
T  11893605 aagttgttttcagcttatttccataaactcttcaaaatagcttatgaaa 11893653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 29834897 - 29834985
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttat 166  Q
    |||||||| ||| ||| || ||| | ||||||  |||||| ||||||| || || ||||||||||||||| ||||| ||||||||||||    
T  29834897 acaacttacgacgtgtccataagcttttttcaatttatttccataagctctacatgatagcttatgaaaacaatttgactttattttat 29834985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 30257756 - 30257692
Alignment:
Q  83 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||||| ||| ||||||||||||||||  |||||| || || ||||| |||||||||    
T  30257756 ttatgacatgttcataagctgttttcagcttatttctataagccctccaggatagtttatgaaaa 30257692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 167
Target Start/End: Original strand, 35707194 - 35707281
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagctt--atgaaaataatttaactttattttatc 167  Q
    |||||||||||  ||||||||||||||||| ||||||||||||| || || |||| |||  ||||||| | ||| |||| ||||||||    
T  35707194 cttatgacatgcccacaagttgttttcagcatattttcataagctctacaggataacttacatgaaaacagtttgacttaattttatc 35707281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 38503470 - 38503518
Alignment:
Q  91 tgttcacaagttgttttcagcttattttcataagcacttcaagatagct 139  Q
    |||||| |||||||||||||||||||||||||||  || ||||||||||    
T  38503470 tgttcataagttgttttcagcttattttcataagttctccaagatagct 38503518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 117
Target Start/End: Complemental strand, 3223745 - 3223706
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattt 117  Q
    ||||||||||||||||| | ||||||||||||||||||||    
T  3223745 acaacttatgacatgtttataagttgttttcagcttattt 3223706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 124
Target Start/End: Complemental strand, 3224498 - 3224455
Alignment:
Q  81 acttatgacatgttcacaagttgttttcagcttattttcataag 124  Q
    ||||||||||||| || |||||||| ||||||||||||||||||    
T  3224498 acttatgacatgtccataagttgttctcagcttattttcataag 3224455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 149
Target Start/End: Complemental strand, 4445782 - 4445715
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 149  Q
    ||||| ||||||||| ||| |||||||| |||||||||| |||| || ||||  ||||||||||||||    
T  4445782 cttataacatgttcagaagctgttttcaacttattttcacaagctctccaagtcagcttatgaaaata 4445715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 154
Target Start/End: Original strand, 4920767 - 4920838
Alignment:
Q  83 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataattta 154  Q
    |||||||||||||  | |||||||| |||||||||||||||||   ||||||||| ||||| ||||| ||||    
T  4920767 ttatgacatgttcttaggttgtttttagcttattttcataagctactcaagataggttatggaaatagttta 4920838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 155
Target Start/End: Complemental strand, 6279467 - 6279400
Alignment:
Q  88 acatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaa 155  Q
    |||||| || |||||||||||||| ||||| ||||||| ||  | ||||||||||||||||| |||||    
T  6279467 acatgtccataagttgttttcagcgtatttccataagctctctaggatagcttatgaaaatagtttaa 6279400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 149
Target Start/End: Complemental strand, 10280727 - 10280656
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 149  Q
    |||||||||  |||||||| ||| | || ||||||||||||||||||  ||| ||||||||||| |||||||    
T  10280727 acaacttatttcatgttcataagcttttgtcagcttattttcataagttcttgaagatagcttacgaaaata 10280656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 124
Target Start/End: Complemental strand, 10809424 - 10809377
Alignment:
Q  77 gacaacttatgacatgttcacaagttgttttcagcttattttcataag 124  Q
    |||||||||||||||||| | ||  |||||||||||||||||||||||    
T  10809424 gacaacttatgacatgtttataatatgttttcagcttattttcataag 10809377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 35590905 - 35590952
Alignment:
Q  99 agttgttttcagcttattttcataagcacttcaagatagcttatgaaa 146  Q
    ||||||||||||||||||| ||||||| || || ||||||||||||||    
T  35590905 agttgttttcagcttatttccataagctctccatgatagcttatgaaa 35590952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 1565526 - 1565596
Alignment:
Q  77 gacaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||| |||||||||||| || ||| |||||||||||||||||||| ||| || ||| |||| ||| |||||    
T  1565526 gacagcttatgacatgtgcataagctgttttcagcttattttcatgagctctccaaaatagattaagaaaa 1565596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 140
Target Start/End: Complemental strand, 11129366 - 11129324
Alignment:
Q  98 aagttgttttcagcttattttcataagcacttcaagatagctt 140  Q
    ||||||||||||| ||||||||||||||| |||| ||||||||    
T  11129366 aagttgttttcagtttattttcataagcatttcaggatagctt 11129324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 147
Target Start/End: Original strand, 12564877 - 12564935
Alignment:
Q  89 catgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||| || ||| |||||||||||||||| | ||||||||  |||||||||||||||||    
T  12564877 catgtccataagctgttttcagcttatttccgtaagcactaaaagatagcttatgaaaa 12564935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Complemental strand, 29635425 - 29635383
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttca 120  Q
    |||| |||||||||||| | |||||||||||||||||||||||    
T  29635425 acaagttatgacatgtttataagttgttttcagcttattttca 29635383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 148
Target Start/End: Complemental strand, 43338190 - 43338124
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaat 148  Q
    ||||||||||||||| ||  | |||||||| ||||||||||||| || || | ||||||||||||||    
T  43338190 cttatgacatgttcataatctattttcagcctattttcataagctctccatgttagcttatgaaaat 43338124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 142
Target Start/End: Original strand, 43722322 - 43722384
Alignment:
Q  80 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat 142  Q
    ||||||||||||||||  | ||||||||||||||||||| |||||| ||  || |||||||||    
T  43722322 aacttatgacatgttcttatgttgttttcagcttatttttataagctctcaaatatagcttat 43722384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 147
Target Start/End: Complemental strand, 45975753 - 45975699
Alignment:
Q  93 ttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||| ||| ||||||||||||||||||||||   || ||||||||||||||||||    
T  45975753 ttcataagctgttttcagcttattttcataaattctccaagatagcttatgaaaa 45975699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 142
Target Start/End: Complemental strand, 51190900 - 51190862
Alignment:
Q  104 ttttcagcttattttcataagcacttcaagatagcttat 142  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  51190900 ttttcagcttattttcataagttcttcaagatagcttat 51190862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 51695486 - 51695556
Alignment:
Q  78 acaacttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||| |||| ||||| ||| | ||||||||||||||||||||   || ||||||||||||||||||    
T  51695486 acaacttatcacattgttcataagctattttcagcttattttcataaattctccaagatagcttatgaaaa 51695556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 167
Target Start/End: Original strand, 3070082 - 3070174
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattt-tcataagcacttcaagatagcttatgaaaataat--ttaactttattttatc 167  Q
    ||||||||||||||||||| ||| ||||||||||||| || | |||||  || | | |||||||||||||| ||   ||||||||||||||||    
T  3070082 acaacttatgacatgttcataagctgttttcagcttaattattataagttctcccaaatagcttatgaaaacaacaattaactttattttatc 3070174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 3924702 - 3924633
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||| |||||| ||||| | ||||||||||| |||||||| ||||| | ||||| |||||||||| ||||    
T  3924702 acaatttatgaaatgtttataagttgttttcggcttatttccataaactcttcaggatagcttataaaaa 3924633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 4202147 - 4202212
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||| || ||| | |||||||||||||||| ||||| || | ||||||||| ||||||    
T  4202147 cttatgacatgtccataagctattttcagcttattttcgtaagctctgccagatagcttttgaaaa 4202212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 4548779 - 4548730
Alignment:
Q  98 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||| |||||||||||  |||| || ||||||||||||||||||    
T  4548779 aagttgtttttagcttattttctgaagctctccaagatagcttatgaaaa 4548730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 116
Target Start/End: Complemental strand, 4549921 - 4549888
Alignment:
Q  83 ttatgacatgttcacaagttgttttcagcttatt 116  Q
    |||||||||||||| |||||||||||||||||||    
T  4549921 ttatgacatgttcataagttgttttcagcttatt 4549888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 143
Target Start/End: Complemental strand, 4622167 - 4622106
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatg 143  Q
    |||||||||||| || ||| |||||| |||||||||||| |||| || ||||||||| ||||    
T  4622167 cttatgacatgtccataagctgtttttagcttattttcacaagctctccaagatagcatatg 4622106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 4700066 - 4700127
Alignment:
Q  86 tgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||| |  ||||||||||||||||||||||||||| || || ||||| |||| ||||    
T  4700066 tgacatgtttaggagttgttttcagcttattttcataagctctccaggatagtttataaaaa 4700127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 4868478 - 4868409
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||||||  | |||||||||||| ||||||| |||||||  ||||| |||| ||| |||||    
T  4868478 acaacttatgacatgtcaataagttgttttcaacttatttacataagcttttcaaaatagtttacgaaaa 4868409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 5276369 - 5276324
Alignment:
Q  80 aacttatgacatgttcacaagttgttttcagcttattttcataagc 125  Q
    ||||||||||||||||| ||||||||||||  |||||||| |||||    
T  5276369 aacttatgacatgttcataagttgttttcaagttattttcttaagc 5276324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 12477283 - 12477348
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||| || |||||||||||||||||||| ||||  | || || |||||||||| ||||    
T  12477283 cttatgacatgtccataagttgttttcagcttatttccatacactctccatgatagcttattaaaa 12477348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 12593449 - 12593514
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||| |||||| || ||||||||||||| ||  || ||||||| || ||||||||||||||||||    
T  12593449 cttataacatgtgcataagttgttttcaggtttattccataagcgctccaagatagcttatgaaaa 12593514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 15579560 - 15579515
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataa 123  Q
    |||||||||||||||| || |||||||| ||||||||||| |||||    
T  15579560 acaacttatgacatgtccataagttgttctcagcttatttccataa 15579515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 144
Target Start/End: Original strand, 16981933 - 16981994
Alignment:
Q  83 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatga 144  Q
    ||||||||||| || |||||||||| |||||||||  |||||| || || ||||||||||||    
T  16981933 ttatgacatgtccataagttgtttttagcttatttatataagctctccatgatagcttatga 16981994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 24460403 - 24460468
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||||| ||| ||||| |||||||||||  ||||| ||  | |||||||||||||||    
T  24460403 cttatgacatgttcataagctgtttccagcttatttttgtaagctctcaaggatagcttatgaaaa 24460468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 142
Target Start/End: Complemental strand, 26185589 - 26185524
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagctta-ttttcataagcacttcaagatagcttat 142  Q
    |||||||||||||||| || |||||||||||| | || ||||| ||||| || |||||||||||||    
T  26185589 acaacttatgacatgtgcataagttgttttcaacatatttttcgtaagctctccaagatagcttat 26185524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 27963366 - 27963431
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||| || |||||||||| |||||||||  |||||| || ||  ||||||||||||||    
T  27963366 cttatgacatgtccataagttgtttttagcttatttatataagctctccataatagcttatgaaaa 27963431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 147
Target Start/End: Original strand, 28077073 - 28077130
Alignment:
Q  90 atgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||| ||||||||||||||||||||  |||||| ||  || ||||||||||||||    
T  28077073 atgttcataagttgttttcagcttatttcaataagctctctaaaatagcttatgaaaa 28077130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 28910064 - 28909999
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||| |||| | |||||||||||| |||||||||||||   ||||| | |||||||||||||    
T  28910064 cttatgacttgtttataagttgttttcatcttattttcataacttcttcatgctagcttatgaaaa 28909999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 28935873 - 28935930
Alignment:
Q  83 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagctt 140  Q
    ||||||||||| || ||||| |||| ||||||||| ||||||| ||||| ||||||||    
T  28935873 ttatgacatgtccataagttttttttagcttatttccataagctcttcaggatagctt 28935930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 147
Target Start/End: Complemental strand, 32182337 - 32182280
Alignment:
Q  90 atgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||| ||||| |||||||||||||| | ||||| ||||||||||| || ||||||    
T  32182337 atgttcataagtttttttcagcttatttccttaagctcttcaagatagattttgaaaa 32182280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 34278687 - 34278724
Alignment:
Q  80 aacttatgacatgttcacaagttgttttcagcttattt 117  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  34278687 aacttatgacatgttcataggttgttttcagcttattt 34278724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 35080061 - 35080130
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||||||||| ||| |||||| |||||||||  | |||| || || ||||||| |||||||    
T  35080061 acaacttatgacatgttcataagctgttttgagcttatttcgacaagctctccatgatagctcatgaaaa 35080130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 143
Target Start/End: Complemental strand, 35925764 - 35925703
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatg 143  Q
    ||||||||||||||| ||| |||||||| ||||||| ||||| | || || |||||||||||    
T  35925764 cttatgacatgttcataagctgttttcaacttatttccataaactctccatgatagcttatg 35925703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 41195189 - 41195254
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||| || | ||| | |||||||||||||||||||||  || |||||||| |||||||||    
T  41195189 cttatgacattttaataagcttttttcagcttattttcataagttctccaagatagtttatgaaaa 41195254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 45205146 - 45205077
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||| |||| |  |||||||||||||||||||| ||| | | || || |||||||||||||||    
T  45205146 acaacttatgatatgtccctaagttgttttcagcttatttccatgaactctacatgatagcttatgaaaa 45205077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 117
Target Start/End: Complemental strand, 47917312 - 47917275
Alignment:
Q  80 aacttatgacatgttcacaagttgttttcagcttattt 117  Q
    ||||||||||||||||| |||||||||||| |||||||    
T  47917312 aacttatgacatgttcataagttgttttcaacttattt 47917275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 19092399 - 19092439
Alignment:
Q  102 tgttttcagcttattttcataagcacttcaagatagcttat 142  Q
    |||||||| ||||||||||||||| ||||| ||||||||||    
T  19092399 tgttttcaccttattttcataagctcttcaggatagcttat 19092439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 147
Target Start/End: Original strand, 21254768 - 21254808
Alignment:
Q  107 tcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||||||||| || |||||||||||| |||||    
T  21254768 tcagcttattttcataagctctccaagatagcttaagaaaa 21254808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 27145730 - 27145785
Alignment:
Q  81 acttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagata 136  Q
    ||||||||||| ||||| ||||| |||||||||||||||||||||  ||||||||||    
T  27145730 acttatgacattgttcataagtt-ttttcagcttattttcataagttcttcaagata 27145785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 35017649 - 35017585
Alignment:
Q  83 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||| || ||||| |||||| ||||||| ||||||| || || || ||||||||||||    
T  35017649 ttatgacatgtccataagttattttcaacttatttccataagctctccaggacagcttatgaaaa 35017585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 35350718 - 35350645
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagct----tattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||||||| || ||| |||||||||||    ||||| ||||||| ||| | |||||||||||||||    
T  35350718 acaacttatgacatgtccataagctgttttcagctagcttatttacataagctctttaggatagcttatgaaaa 35350645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 82 - 167
Target Start/End: Complemental strand, 20672824 - 20672739
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 167  Q
    ||||||||||||||| ||| |||||||||||||||||||||||| || || |||||||||| |||| | ||| |||||||||||||    
T  20672824 cttatgacatgttcataagctgttttcagcttattttcataagctctccaggatagcttataaaaacagtttgactttattttatc 20672739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 33553317 - 33553229
Alignment:
Q  79 caacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 167  Q
    ||||||||||||||| |  ||| ||||  |||||||||| ||||||| ||||||||||||||||||||| ||||| |||||||||||||    
T  33553317 caacttatgacatgtccctaagctgttcccagcttatttccataagctcttcaagatagcttatgaaaacaatttgactttattttatc 33553229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 88 - 149
Target Start/End: Original strand, 42215084 - 42215145
Alignment:
Q  88 acatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 149  Q
    ||||||||| |||||||||||||||||||| ||||||| || ||||||||||||||||||||    
T  42215084 acatgttcataagttgttttcagcttatttacataagctctccaagatagcttatgaaaata 42215145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 149
Target Start/End: Original strand, 30191133 - 30191204
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 149  Q
    ||||||||||||||||||| || ||||||||||||||||| ||||| || |||| |||||||||| ||||||    
T  30191133 acaacttatgacatgttcaaaacttgttttcagcttatttccataaacatttcaggatagcttatcaaaata 30191204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 154
Target Start/End: Complemental strand, 11494197 - 11494148
Alignment:
Q  105 tttcagcttattttcataagcacttcaagatagcttatgaaaataattta 154  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  11494197 tttcagcttattttcataagctcttcaagatagcttatgaaaatagttta 11494148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 125
Target Start/End: Original strand, 13000416 - 13000463
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagc 125  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||    
T  13000416 acaacttatgacatgtccacaagttgttttcagcttatttccataagc 13000463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 79 - 146
Target Start/End: Complemental strand, 21653158 - 21653091
Alignment:
Q  79 caacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 146  Q
    |||||||||||| ||||| ||| | |||||||||||||||||||||| || |||||||||| ||||||    
T  21653158 caacttatgacacgttcataagctattttcagcttattttcataagctctccaagatagctaatgaaa 21653091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 124
Target Start/End: Original strand, 2594989 - 2595035
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataag 124  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||    
T  2594989 acaacttatgacatgttcataagttgttttcagcttattctcataag 2595035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 101 - 147
Target Start/End: Complemental strand, 4762564 - 4762518
Alignment:
Q  101 ttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||    
T  4762564 ttgttttcagcttatttacataagctcttcaagatagcttatgaaaa 4762518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 149
Target Start/End: Complemental strand, 11494033 - 11493972
Alignment:
Q  88 acatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 149  Q
    ||||||||| ||| ||| ||||||||| |||||||||| |||||||||||| ||||||||||    
T  11494033 acatgttcataagctgtgttcagcttactttcataagctcttcaagatagcgtatgaaaata 11493972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 11569453 - 11569518
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||| || ||||||||||||||||||||||| || | || || |||||||||||||||    
T  11569453 cttatgacatgtacataagttgttttcagcttattttcaaaatctctccatgatagcttatgaaaa 11569518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 80 - 148
Target Start/End: Original strand, 25869260 - 25869328
Alignment:
Q  80 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaat 148  Q
    |||||||||||||| || |||||||||||||||||||| ||||| | || || |||||| |||||||||    
T  25869260 aacttatgacatgtccataagttgttttcagcttatttccataaactctccatgatagcctatgaaaat 25869328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 78 - 142
Target Start/End: Original strand, 39866726 - 39866790
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat 142  Q
    |||||||||  ||||| || ||| ||||||||| |||||||||||||| ||||||||||||||||    
T  39866726 acaacttatagcatgtccataagctgttttcagtttattttcataagctcttcaagatagcttat 39866790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 167
Target Start/End: Complemental strand, 14949942 - 14949855
Alignment:
Q  80 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 167  Q
    |||||||||||||| || ||| ||||||||||||||||  |||| | ||| | ||||||||||||||| | ||| ||| |||||||||    
T  14949942 aacttatgacatgtccataagctgttttcagcttatttctataatctctttaggatagcttatgaaaagagtttgactctattttatc 14949855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 147
Target Start/End: Complemental strand, 27028883 - 27028840
Alignment:
Q  104 ttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||||||||||||| || ||||||||||||||||||    
T  27028883 ttttcagcttattttcataagctctccaagatagcttatgaaaa 27028840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 124
Target Start/End: Complemental strand, 30389170 - 30389131
Alignment:
Q  85 atgacatgttcacaagttgttttcagcttattttcataag 124  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  30389170 atgacatgttcataagttgttttcagcttattttcataag 30389131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 33714236 - 33714299
Alignment:
Q  86 tgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 149  Q
    |||| |||||| ||| ||||||||||||||||| |||||| || | ||||||||||||||||||    
T  33714236 tgacttgttcataagctgttttcagcttatttttataagctctcccagatagcttatgaaaata 33714299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 38421340 - 38421273
Alignment:
Q  80 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||||| || ||||||||||||||||| || || |||  |||||||||||||| ||||||    
T  38421340 aacttatgacatgtccataagttgttttcagcttacttacacaagatcttcaagatagcttttgaaaa 38421273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 167
Target Start/End: Original strand, 40280253 - 40280308
Alignment:
Q  112 ttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 167  Q
    |||||| ||||||| |||| |||||||||||||||| ||||| |||||||||||||    
T  40280253 ttatttccataagctcttctagatagcttatgaaaacaattttactttattttatc 40280308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 125
Target Start/End: Original strand, 41606899 - 41606942
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagc 125  Q
    ||||||||||||||| |||||||||||||||||||| |||||||    
T  41606899 cttatgacatgttcaaaagttgttttcagcttatttccataagc 41606942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 149
Target Start/End: Original strand, 42215302 - 42215369
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 149  Q
    |||||||| |||||| ||| |||||||||||||||| ||||||| || || |||||| ||||||||||    
T  42215302 cttatgacttgttcataagctgttttcagcttatttacataagctctccaggatagcatatgaaaata 42215369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 129
Target Start/End: Original strand, 3600735 - 3600781
Alignment:
Q  83 ttatgacatgttcacaagttgttttcagcttattttcataagcactt 129  Q
    ||||||||||| || |||||||||||| |||||||||||||||||||    
T  3600735 ttatgacatgtccataagttgttttcaacttattttcataagcactt 3600781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 129
Target Start/End: Original strand, 14339602 - 14339648
Alignment:
Q  83 ttatgacatgttcacaagttgttttcagcttattttcataagcactt 129  Q
    ||||||||||| || |||||||||||| |||||||||||||||||||    
T  14339602 ttatgacatgtccataagttgttttcaacttattttcataagcactt 14339648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 779053 - 779122
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||||||||| |||||||||||| ||||||||  ||  | || |||||||| |||||||||    
T  779053 acaacttatgacatgttcataagttgttttcatcttattttggtacactctccaagatagtttatgaaaa 779122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 4281624 - 4281579
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataa 123  Q
    ||||| ||||||||||||| |||||||||||| |||||||||||||    
T  4281624 acaacatatgacatgttcataagttgttttcatcttattttcataa 4281579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 30918190 - 30918122
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||| |||||| |||| |||||||||||||||||||| ||||||| || ||||| | ||||||||||    
T  30918190 acaacttgtgacat-ttcataagttgttttcagcttatttccataagctctccaagaaaacttatgaaaa 30918122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 32840977 - 32841022
Alignment:
Q  78 acaacttatgacat-gttcacaagttgttttcagcttattttcata 122  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||    
T  32840977 acaacttatgacattgttcataagttgttttcagcttattttcata 32841022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 41620283 - 41620352
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||| ||||||||||| || ||||||||||| ||||||||||| |||| |  ||||||||||||| ||||    
T  41620283 acaaattatgacatgtccataagttgttttccgcttattttcaaaagctcgacaagatagcttataaaaa 41620352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 44236835 - 44236884
Alignment:
Q  98 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||| |||||||||||||||||||||| || ||| ||||||||||||||    
T  44236835 aagttattttcagcttattttcataagctctccaatatagcttatgaaaa 44236884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 147
Target Start/End: Original strand, 2235653 - 2235717
Alignment:
Q  83 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||||| |||| ||||| |||| |||| ||||||| ||| |||||| ||||||||||    
T  2235653 ttatgacatgttcataagtcgtttttagctcatttccataagctctttaagataccttatgaaaa 2235717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 147
Target Start/End: Original strand, 9956819 - 9956875
Alignment:
Q  91 tgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||| |||| ||||||||||||||||||||||  || |||||||| |||||||||    
T  9956819 tgttcataagtagttttcagcttattttcataagttctccaagatagattatgaaaa 9956875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 12224891 - 12224959
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 146  Q
    |||||||||||||||| ||  |||| ||||||||||||||| || ||| ||||| ||| ||||||||||    
T  12224891 acaacttatgacatgtccatcagtttttttcagcttatttttatgagctcttcaggatggcttatgaaa 12224959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 27754477 - 27754413
Alignment:
Q  83 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||| | | ||||||  |||||||||||||||||||| || ||| ||||||||||||||    
T  27754477 ttatgacatgattataagttgcgttcagcttattttcataagctctccaaaatagcttatgaaaa 27754413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 149
Target Start/End: Original strand, 9540992 - 9541059
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 149  Q
    |||||||||||| || || |||| ||||||||||||||| |||| ||  | |||||||||||||||||    
T  9540992 cttatgacatgtccataatttgtgttcagcttattttcaaaagctctctaggatagcttatgaaaata 9541059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 10075551 - 10075614
Alignment:
Q  86 tgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 149  Q
    ||||||||| ||||| || ||| ||||||||||||||||| ||  | |||||||||||||||||    
T  10075551 tgacatgttgacaagctgcttttagcttattttcataagctctctaggatagcttatgaaaata 10075614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 153
Target Start/End: Complemental strand, 12851250 - 12851179
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataattt 153  Q
    ||||| ||||||||| ||| ||||||| |||||||||||||||| ||  | || |||||||||||| |||||    
T  12851250 cttataacatgttcataagatgttttcggcttattttcataagctctcaaggaaagcttatgaaaacaattt 12851179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 147
Target Start/End: Original strand, 28769337 - 28769400
Alignment:
Q  84 tatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||| |||| || |||||||||||||||||||| ||||| | || ||| ||||||||||||||    
T  28769337 tatgatatgtccataagttgttttcagcttatttccataaactctccaaaatagcttatgaaaa 28769400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 149
Target Start/End: Original strand, 28784793 - 28784858
Alignment:
Q  83 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 149  Q
    |||||||||||||| ||| | ||||||||||||||| | |||| ||  |||||||||||||||||||    
T  28784793 ttatgacatgttcataagct-ttttcagcttatttttacaagctctctaagatagcttatgaaaata 28784858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 147
Target Start/End: Original strand, 29059795 - 29059857
Alignment:
Q  85 atgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||| | ||||||||||| |||| || || || | ||||||||||||||||||||    
T  29059795 atgacatgttcatatgttgttttcagattatgttaatgagtatttcaagatagcttatgaaaa 29059857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 1930109 - 1930044
Alignment:
Q  83 ttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||| ||||| ||| ||||||||||||||||||| |||  |  ||||||||||||||||||    
T  1930109 ttatgacattgttcataagctgttttcagcttattttcacaaggtcaccaagatagcttatgaaaa 1930044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 125
Target Start/End: Original strand, 3161617 - 3161662
Alignment:
Q  80 aacttatgacatgttcacaagttgttttcagcttattttcataagc 125  Q
    ||||||||||||||||| ||  ||||||||||||||||| ||||||    
T  3161617 aacttatgacatgttcataaaatgttttcagcttatttttataagc 3161662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 5069771 - 5069706
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||| ||||||||| ||||  ||||||||||||||||||||||  |  |||||| ||||||||||    
T  5069771 cttataacatgttcataagtcattttcagcttattttcataagctttcgaagatatcttatgaaaa 5069706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 7918438 - 7918507
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||| |||||||||| ||| ||||| || |||||||  |||||| || |||||||||||| |||||    
T  7918438 acaacttaagacatgttcataagctgtttccaacttatttcaataagctctccaagatagcttacgaaaa 7918507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 7918789 - 7918834
Alignment:
Q  102 tgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||||||| || |||| || ||||||||||||||||||    
T  7918789 tgttttcagcttatttccacaagctctacaagatagcttatgaaaa 7918834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 37353245 - 37353310
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||| |||| ||  ||||||||| |||||||||||||| ||  ||||||||||| |||||    
T  37353245 cttatgacatattcataaactgttttcagattattttcataagctctcaaagatagcttaagaaaa 37353310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 39551201 - 39551270
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||||||| || ||| |||||| | |||||||| |||||| || || || ||||||||||||    
T  39551201 acaacttatgacatgtccaaaagctgtttttaacttatttttataagctctccaggaaagcttatgaaaa 39551270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 43504829 - 43504760
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||| ||| |||| | ||| |||||||||||||||| ||||||  || ||||||||||||| ||||    
T  43504829 acaacttacgacttgtttataagctgttttcagcttatttccataagttctccaagatagcttataaaaa 43504760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 131
Target Start/End: Original strand, 11000573 - 11000621
Alignment:
Q  83 ttatgacatgttcacaagttgttttcagcttattttcataagcacttca 131  Q
    ||||||| |||||| ||||||| |||||||||||| ||||||| |||||    
T  11000573 ttatgacttgttcataagttgtcttcagcttatttccataagctcttca 11000621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 146
Target Start/End: Complemental strand, 11795166 - 11795102
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 146  Q
    |||||||||||| || ||  |||||||||||||||| ||||||| || ||  |||||||||||||    
T  11795166 cttatgacatgtccataacctgttttcagcttatttccataagctctccataatagcttatgaaa 11795102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 150
Target Start/End: Complemental strand, 31168088 - 31168020
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataa 150  Q
    ||||||||||| ||| ||  | ||||||||||| |||||||||| |||| ||||| |||||| ||||||    
T  31168088 cttatgacatgctcataaacttttttcagcttactttcataagctcttctagataccttatgcaaataa 31168020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 31862570 - 31862502
Alignment:
Q  79 caacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||| | | || ||| |||||||||||||||||||||||| ||  | |||| ||||||||||    
T  31862570 caacttatgacctatgcataagctgttttcagcttattttcataagctctctaggataacttatgaaaa 31862502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 144
Target Start/End: Original strand, 42370359 - 42370419
Alignment:
Q  84 tatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatga 144  Q
    ||||||||||  ||||  |||||||||||||||| ||||| | ||||| ||||||||||||    
T  42370359 tatgacatgtctacaaactgttttcagcttatttccataaactcttcatgatagcttatga 42370419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 167
Target Start/End: Complemental strand, 7244758 - 7244669
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 167  Q
    |||| |||||||||| ||| |||||||||||||||||||||||||||| || ||| |||||||||||||| | ||| ||||| |||||||    
T  7244758 acaatttatgacatgctcataagttgttttcagcttattttcataagctctccaatatagcttatgaaaacagtttgactttcttttatc 7244669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 82 - 165
Target Start/End: Original strand, 22551401 - 22551484
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttatttta 165  Q
    ||||||||||||||| | |||||||||||||||||| ||||||| || ||||||  |||||||||| ||||| |||||||||||    
T  22551401 cttatgacatgttcaaatgttgttttcagcttatttacataagctctccaagattacttatgaaaagaatttgactttatttta 22551484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 12110438 - 12110369
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||||||||||||  |||||| || |||||||||||||  |||||||||||||||||||||    
T  12110438 acaacttatgacatgttcacaaactgtttttagattattttcataagttcttcaagatagcttatgaaaa 12110369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 83 - 156
Target Start/End: Original strand, 48917341 - 48917416
Alignment:
Q  83 ttatgacatgttcacaagttgtttt--cagcttattttcataagcacttcaagatagcttatgaaaataatttaac 156  Q
    |||||||||||||||||||||| ||  |||||||||||||||||| || |||||||||||||||||| || |||||    
T  48917341 ttatgacatgttcacaagttgtgtttccagcttattttcataagctctccaagatagcttatgaaaacaacttaac 48917416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 149
Target Start/End: Original strand, 12792579 - 12792626
Alignment:
Q  102 tgttttcagcttattttcataagcacttcaagatagcttatgaaaata 149  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  12792579 tgttttcagcttattttcataagctcttcaagatagcttatgaaaata 12792626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 147
Target Start/End: Complemental strand, 529461 - 529384
Alignment:
Q  70 tattttggacaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||| ||| ||||||||||| ||||| ||| |||||||| | ||||||||||||| || ||||||||||||||||||    
T  529461 tatttgggagaacttatgacaagttcataagctgttttcaacatattttcataagctctccaagatagcttatgaaaa 529384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 80 - 166
Target Start/End: Complemental strand, 34035994 - 34035907
Alignment:
Q  80 aacttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttat 166  Q
    |||||||||||| ||||| |||||||||||| |||||||||  |||  ||  ||||||||||||||||| ||||||||||||| ||||    
T  34035994 aacttatgacattgttcataagttgttttcaacttattttcgcaagttctctaagatagcttatgaaaacaatttaactttatattat 34035907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 46825178 - 46825107
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttc-agcttattt-tcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||||||| ||| |||||||||  ||||||||| ||||||||||| ||||||||||||||||||    
T  46825178 acaacttatgacatgtccacgagttgttttttagcttatttctcataagcactccaagatagcttatgaaaa 46825107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 25596091 - 25596042
Alignment:
Q  98 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||| ||||||||||||||| || ||||||||||||||||||    
T  25596091 aagttgttttcaacttattttcataagctctccaagatagcttatgaaaa 25596042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 154
Target Start/End: Original strand, 6552288 - 6552360
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataattta 154  Q
    |||||||||| |||| ||| |||||||||||||||||||||| | || || ||||| ||||||||||| ||||    
T  6552288 cttatgacatattcataagctgttttcagcttattttcataaactctgcatgatagtttatgaaaatagttta 6552360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 167
Target Start/End: Original strand, 43250695 - 43250782
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat--gaaaataatttaactttattttatc 167  Q
    ||||||||||||||  ||||||||||||| |||| ||||||||| || ||| |||||||||  |||||  | ||||||||||||||||    
T  43250695 cttatgacatgttcgtaagttgttttcagtttatattcataagctctccaaaatagcttatacgaaaaacaattaactttattttatc 43250782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 83 - 147
Target Start/End: Original strand, 44151477 - 44151541
Alignment:
Q  83 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||| || ||| |||||||||||||||| |||||||  |||||||||| |||||||||    
T  44151477 ttatgacatgtccataagatgttttcagcttatttccataagcttttcaagatagtttatgaaaa 44151541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 142
Target Start/End: Complemental strand, 21248002 - 21247939
Alignment:
Q  80 aacttatgacatgttcacaagttgttttcagcttattttca-taagcacttcaagatagcttat 142  Q
    ||||||||||||||||| |||||||||| |||||||||||| ||||| || |||||||| ||||    
T  21248002 aacttatgacatgttcataagttgttttaagcttattttcagtaagctctccaagataggttat 21247939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 125
Target Start/End: Complemental strand, 46082114 - 46082067
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagc 125  Q
    |||||||||||||||  || ||||||||||||||||||||||||||||    
T  46082114 acaacttatgacatgaccataagttgttttcagcttattttcataagc 46082067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 125
Target Start/End: Original strand, 47134749 - 47134796
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagc 125  Q
    ||||||||||||| || || ||||||||||||||||||||||||||||    
T  47134749 acaacttatgacacgtccataagttgttttcagcttattttcataagc 47134796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 147
Target Start/End: Complemental strand, 4966231 - 4966165
Alignment:
Q  81 acttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||| |||| || ||||||||||||| |||||| ||||||| ||||| ||| |||||||||||    
T  4966231 acttatgatatgtccataagttgttttcagtttatttccataagctcttcaggatggcttatgaaaa 4966165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 124
Target Start/End: Complemental strand, 11048105 - 11048059
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataag 124  Q
    ||||||||||||||||||| ||| ||||||||||||||| |||||||    
T  11048105 acaacttatgacatgttcataagctgttttcagcttattctcataag 11048059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 136
Target Start/End: Original strand, 25670578 - 25670636
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagata 136  Q
    ||||||||||||||||| | || |||||||||||||||||||| |||| || |||||||    
T  25670578 acaacttatgacatgttaataaattgttttcagcttattttcacaagctctccaagata 25670636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 9423586 - 9423655
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||| |||||||||||||| ||||||||||||||||||||  | |||| || || |||||||||| ||||    
T  9423586 acaatttatgacatgttcataagttgttttcagcttatttcaagaagctctccaggatagcttattaaaa 9423655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 149
Target Start/End: Original strand, 12792642 - 12792687
Alignment:
Q  104 ttttcagcttattttcataagcacttcaagatagcttatgaaaata 149  Q
    |||||||||||||| |||| || |||||||||||||||||||||||    
T  12792642 ttttcagcttatttccatatgctcttcaagatagcttatgaaaata 12792687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 24363601 - 24363662
Alignment:
Q  86 tgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||| || |||||||||||||||||||| ||||| | || || |||||||||||||||    
T  24363601 tgacatgtccataagttgttttcagcttatttccataacctctccaggatagcttatgaaaa 24363662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 143
Target Start/End: Complemental strand, 29286864 - 29286804
Alignment:
Q  83 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatg 143  Q
    ||||||||||||||  ||||||||||||||||||| |||||||  ||||| ||| ||||||    
T  29286864 ttatgacatgttcatcagttgttttcagcttatttacataagcttttcaaaataacttatg 29286804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 150
Target Start/End: Complemental strand, 30317040 - 30316968
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataa 150  Q
    ||||||||| | ||||| | ||| |||||||| ||||||||| || ||| ||||||||| |||||||||||||    
T  30317040 acaacttataaaatgttaataagctgttttcaacttattttcgtatgcatttcaagataccttatgaaaataa 30316968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 149
Target Start/End: Original strand, 12792514 - 12792561
Alignment:
Q  102 tgttttcagcttattttcataagcacttcaagatagcttatgaaaata 149  Q
    |||| |||||||||||  |||||| |||||||||||||||||||||||    
T  12792514 tgttatcagcttatttcaataagctcttcaagatagcttatgaaaata 12792561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 117
Target Start/End: Original strand, 20888386 - 20888425
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattt 117  Q
    |||||||||| |||||||| ||||||||||||||||||||    
T  20888386 acaacttatgccatgttcataagttgttttcagcttattt 20888425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 141
Target Start/End: Complemental strand, 35267436 - 35267377
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagctta 141  Q
    ||||||||||||||| | ||||||||||||||||||  |||||| || ||||||| ||||    
T  35267436 cttatgacatgttcataggttgttttcagcttatttctataagctctccaagataactta 35267377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 131
Target Start/End: Complemental strand, 44808234 - 44808183
Alignment:
Q  80 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttca 131  Q
    |||||||||||||| || ||  |||||||||||||||||||||||| |||||    
T  44808234 aacttatgacatgtccataacctgttttcagcttattttcataagcccttca 44808183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 167
Target Start/End: Original strand, 5017958 - 5018023
Alignment:
Q  104 ttttcagcttattttcataagcacttcaagatagcttat--gaaaataatttaactttattttatc 167  Q
    |||||||||||||| |||||||  |||||||||||||||  || | |||||| |||||||||||||    
T  5017958 ttttcagcttatttccataagcttttcaagatagcttataagagagtaatttgactttattttatc 5018023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 120
Target Start/End: Complemental strand, 36537986 - 36537944
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttca 120  Q
    ||||||||||||||||||| |||||||||| ||||| ||||||    
T  36537986 acaacttatgacatgttcataagttgtttttagctttttttca 36537944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 167
Target Start/End: Complemental strand, 42656563 - 42656482
Alignment:
Q  88 acatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat--gaaaataatttaactttattttatc 167  Q
    ||||||||| ||  ||||| | |||||||||||||||| || |||||||||||||   ||||| |||| |||||||||||||    
T  42656563 acatgttcataaaatgtttgcggcttattttcataagctctccaagatagcttatacaaaaatgatttgactttattttatc 42656482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 124
Target Start/End: Original strand, 43219640 - 43219682
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataag 124  Q
    ||||||||||||||| ||| ||||||||||||||| |||||||    
T  43219640 cttatgacatgttcataagctgttttcagcttattctcataag 43219682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 9038185 - 9038121
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||||| || |||||||||||||||||||| |||  || || ||||| |||||||||    
T  9038185 cttatgacatgttcataa-ttgttttcagcttattttcacaagttctccatgatagtttatgaaaa 9038121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 15740403 - 15740448
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataa 123  Q
    ||||||||||||||||||| ||| |||||| | |||||||||||||    
T  15740403 acaacttatgacatgttcataagctgtttttaacttattttcataa 15740448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 18962588 - 18962633
Alignment:
Q  102 tgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||| ||||||||||||||  || ||||||||||||||||||    
T  18962588 tgttttcaccttattttcataaggcctccaagatagcttatgaaaa 18962633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 18965726 - 18965771
Alignment:
Q  102 tgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||| ||||||||||  || ||||||||||||||||||    
T  18965726 tgttttcagcttgttttcataagacctccaagatagcttatgaaaa 18965771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 27378840 - 27378889
Alignment:
Q  98 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||| |||||||||||||| || || ||||| |||||||||    
T  27378840 aagttgttttcagtttattttcataagctctccaggatagtttatgaaaa 27378889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 33645953 - 33646021
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||||||  | |||||||||| || |||||| ||||||| | || ||||||||||||||||    
T  33645953 acaacttatgacatgtctataagttgtttttaggttatttccataagctc-tccagatagcttatgaaaa 33646021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 45859519 - 45859587
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||| ||||||||||||| | ||||||||||||||||||  |||||| ||||| |||||  ||||||||    
T  45859519 acaacatatgacatgttcata-gttgttttcagcttatttctataagctcttcatgatagtctatgaaaa 45859587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 46104583 - 46104628
Alignment:
Q  102 tgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||| |||||||||||||||||| |||||  ||||||||||||||    
T  46104583 tgtttccagcttattttcataagctcttcagcatagcttatgaaaa 46104628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 47559601 - 47559662
Alignment:
Q  86 tgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||| ||||||||||| ||| |||||||||||  || ||| ||| ||||||||||    
T  47559601 tgacatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaa 47559662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 167
Target Start/End: Original strand, 3836702 - 3836765
Alignment:
Q  106 ttcagcttattttcataagcacttcaagatagcttat--gaaaataatttaactttattttatc 167  Q
    |||| ||||||||||| ||| || |||||||||||||  |||||| ||||||||| ||||||||    
T  3836702 ttcaacttattttcattagctctccaagatagcttatacgaaaatcatttaacttgattttatc 3836765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 6226148 - 6226192
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcata 122  Q
    |||||| ||| |||| ||| |||||||||||||||||||||||||    
T  6226148 acaactaatgtcatgctcataagttgttttcagcttattttcata 6226192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 7623205 - 7623145
Alignment:
Q  89 catgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 149  Q
    ||||| || ||||||||||  |||||||||| ||| | ||||||||||| |||||||||||    
T  7623205 catgtccataagttgtttttggcttattttcgtaaactcttcaagatagtttatgaaaata 7623145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 122
Target Start/End: Complemental strand, 9872950 - 9872906
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcata 122  Q
    |||||||||||||||| || ||||||||| ||||| |||||||||    
T  9872950 acaacttatgacatgtccataagttgtttccagctcattttcata 9872906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 33601127 - 33601195
Alignment:
Q  98 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttat 166  Q
    |||||||||| ||||||||||||||| | |||    |||||||||||||| | ||| ||||||||||||    
T  33601127 aagttgtttttagcttattttcataaactctttgcaatagcttatgaaaacagtttgactttattttat 33601195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 142
Target Start/End: Complemental strand, 33871322 - 33871265
Alignment:
Q  83 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat 142  Q
    |||||||||||||| |||||||||| |||||||||  ||| || || |||||||||||||    
T  33871322 ttatgacatgttcataagttgttttgagcttattt--atatgctctccaagatagcttat 33871265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 120
Target Start/End: Complemental strand, 35007665 - 35007633
Alignment:
Q  88 acatgttcacaagttgttttcagcttattttca 120  Q
    ||||||||| |||||||||||||||||||||||    
T  35007665 acatgttcataagttgttttcagcttattttca 35007633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 39345544 - 39345480
Alignment:
Q  83 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||| || |||||| ||||||||||||| ||||||  | ||| |||||||| ||||||    
T  39345544 ttatgacatgtccataagttgctttcagcttatttccataaggtcgtcaggatagcttttgaaaa 39345480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 118
Target Start/End: Original strand, 39539773 - 39539813
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttatttt 118  Q
    |||||||||||||||| || ||| |||||||||||||||||    
T  39539773 acaacttatgacatgtccataagctgttttcagcttatttt 39539813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 33887904 - 33887839
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||||||||||||||||||| ||||||| |||||||| |||| |||||||||||||||    
T  33887904 cttatgacatgttcacaagttgttttcaacttatttccataagcatttcaggatagcttatgaaaa 33887839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 78 - 150
Target Start/End: Complemental strand, 4420721 - 4420649
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataa 150  Q
    |||| |||||||||||||| ||| |||||||||||||||| ||||||| || |||||||||||| ||||||||    
T  4420721 acaaattatgacatgttcataagctgttttcagcttatttccataagctctccaagatagcttaggaaaataa 4420649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 6647461 - 6647396
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||||| ||| |||||||| ||||||||||||||| ||  |||||||||||||||||    
T  6647461 cttatgacatgttcataagatgttttcaacttattttcataagctctctaagatagcttatgaaaa 6647396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 80 - 131
Target Start/End: Complemental strand, 6537023 - 6536972
Alignment:
Q  80 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttca 131  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||| |||||    
T  6537023 aacttatgacatgttcataagttgttttcagcttatttccataagctcttca 6536972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 80 - 130
Target Start/End: Complemental strand, 9027654 - 9027604
Alignment:
Q  80 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttc 130  Q
    |||||||||||||| || |||||||||||||||||||||||||||| ||||    
T  9027654 aacttatgacatgtccataagttgttttcagcttattttcataagctcttc 9027604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 140
Target Start/End: Complemental strand, 13908537 - 13908479
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagctt 140  Q
    ||||||||||||||  ||| |||||||||||||||||||||||| ||||| ||||||||    
T  13908537 cttatgacatgttcgtaagctgttttcagcttattttcataagctcttcatgatagctt 13908479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 167
Target Start/End: Complemental strand, 31583750 - 31583668
Alignment:
Q  85 atgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 167  Q
    ||||||||| || |||||||||||| ||||||| |||||||  |||  ||||||||||||||| ||||| |||| ||||||||    
T  31583750 atgacatgtccataagttgttttcaacttatttccataagcttttcgggatagcttatgaaaacaatttgacttcattttatc 31583668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 2112278 - 2112209
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||||||||| ||||||||||| | ||||||  |||||||||  ||||||| |||||||||    
T  2112278 acaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaa 2112209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 167
Target Start/End: Original strand, 2205610 - 2205671
Alignment:
Q  106 ttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 167  Q
    |||||||||||| ||||||| || |||||||||||||||||| ||||| ||||| |||||||    
T  2205610 ttcagcttatttccataagctctccaagatagcttatgaaaacaatttgactttgttttatc 2205671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 3528881 - 3528812
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||||||| || || ||||||||| ||||||||||||||| || |||||||| | |||||||    
T  3528881 acaacttatgacatgtccataacttgttttcatcttattttcataagctctccaagatagttcatgaaaa 3528812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 30863324 - 30863255
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||||||| || ||||||||||||||||| ||  |||||| ||||||| |||| ||||||||    
T  30863324 acaacttatgacatgtacataagttgttttcagcttacttctataagctcttcaagctagcctatgaaaa 30863255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 154
Target Start/End: Complemental strand, 26694931 - 26694880
Alignment:
Q  103 gttttcagcttattttcataagcacttcaagatagcttatgaaaataattta 154  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||| ||||||    
T  26694931 gttttcagcttattttcataagttcttcaagatagtttatgaaaacaattta 26694880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 835265 - 835310
Alignment:
Q  102 tgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||||||||||||||  || ||||||||||||||||||    
T  835265 tgttttcagcttattttcataagttctccaagatagcttatgaaaa 835310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 5564124 - 5564189
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||| |  ||| |||||||||||||||| ||||| | |||||||| ||||||||||||    
T  5564124 cttatgacatgtccgaaagctgttttcagcttatttgcataaactcttcaagacagcttatgaaaa 5564189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 7931718 - 7931787
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||||||||  |||||||||||||||||||| | ||||| ||  | |||||||| ||||||    
T  7931718 acaacttatgacatgttcttaagttgttttcagcttatttccgtaagctctgtaggatagcttttgaaaa 7931787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 10616533 - 10616602
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||||||| |  ||||||| ||||||||||||| |||||| || ||| ||||||||| ||||    
T  10616533 acaacttatgacatgtccgtaagttgtgttcagcttatttttataagctctccaaaatagcttattaaaa 10616602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 20368172 - 20368241
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||||||||| ||| |  ||||| ||||||||||||||  || ||||| ||||||||||||    
T  20368172 acaacttatgacatgttcataagctagtttcaacttattttcataagttctccaagaaagcttatgaaaa 20368241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 27894100 - 27894055
Alignment:
Q  102 tgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||    
T  27894100 tgttttcagcttattttcataagcttttcaagatatcttatgaaaa 27894055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 31624164 - 31624099
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||||| ||| |||||||| |||||||||||||   || ||||||||| ||||||||    
T  31624164 cttatgacatgttcataagctgttttcaacttattttcataatttctccaagatagcctatgaaaa 31624099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 32386559 - 32386624
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||| |||||| ||||| ||||||||||||||||||||||||| || || |||| || |||||||    
T  32386559 cttataacatgtccacaacttgttttcagcttattttcataagctctccaggataactaatgaaaa 32386624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 34403933 - 34403864
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||||||||| ||| |||||||| ||||||| ||||||| ||| |  | ||||||||||||    
T  34403933 acaacttatgacatgttcataaggtgttttcaccttatttccataagctctttagtacagcttatgaaaa 34403864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 34939591 - 34939526
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatg 143  Q
    ||||||||||||| || |  |||||||||||||||||||| ||||| | ||||| |||||||||||    
T  34939591 acaacttatgacacgtccgtaagttgttttcagcttatttccataacctcttcaggatagcttatg 34939526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 150
Target Start/End: Complemental strand, 2455888 - 2455816
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataa 150  Q
    |||||||||||||||  || ||  | |||||| ||||||| ||||||| || |||||||||||||||||||||    
T  2455888 acaacttatgacatgcccataaactattttcaacttatttccataagctctccaagatagcttatgaaaataa 2455816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 148
Target Start/End: Original strand, 17241254 - 17241314
Alignment:
Q  88 acatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaat 148  Q
    ||||||||| |||||||||||| ||||||| ||||| | || |||||||||| ||||||||    
T  17241254 acatgttcataagttgttttcaacttatttccataaactctccaagatagctaatgaaaat 17241314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 147
Target Start/End: Original strand, 19275633 - 19275697
Alignment:
Q  83 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||| |||||| || |||| | |||||| ||||||| ||||| |||||||||||||||    
T  19275633 ttatgacatgtccacaagctgatttcggtttatttccataagctcttcatgatagcttatgaaaa 19275697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 147
Target Start/End: Complemental strand, 20370940 - 20370892
Alignment:
Q  99 agttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||| |||||||||||||||||| | ||||||| ||||||||    
T  20370940 agttgttttcatcttattttcataagcactcctagatagcatatgaaaa 20370892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 20512656 - 20512704
Alignment:
Q  98 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 146  Q
    |||||||||||||||||||| ||||||| |||||  |||||||||||||    
T  20512656 aagttgttttcagcttatttccataagctcttcataatagcttatgaaa 20512704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 150
Target Start/End: Original strand, 29837077 - 29837148
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataa 150  Q
    ||||||| |||||| || | ||||||||| ||||| |||||||||||| ||||| ||||| ||||||||||||    
T  29837077 acaacttctgacatatttataagttgttt-cagctaattttcataagctcttcaggatagtttatgaaaataa 29837148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 33832265 - 33832309
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcata 122  Q
    ||||||||||||||||| | |||||||||| ||||||||||||||    
T  33832265 acaacttatgacatgtttataagttgtttttagcttattttcata 33832309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 122
Target Start/End: Complemental strand, 821872 - 821833
Alignment:
Q  83 ttatgacatgttcacaagttgttttcagcttattttcata 122  Q
    |||||||||||||| ||| |||||||||||||||||||||    
T  821872 ttatgacatgttcataagctgttttcagcttattttcata 821833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 8364970 - 8365037
Alignment:
Q  80 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||| |||||||||| ||||| |||||||||||||||||||| ||  |  || |||||||||||||||    
T  8364970 aactgatgacatgtttacaagctgttttcagcttattttcatcagttcaccatgatagcttatgaaaa 8365037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 125
Target Start/End: Complemental strand, 31421023 - 31420976
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagc 125  Q
    |||||||||  ||| |||| ||||||||||||||||||||||||||||    
T  31421023 acaacttatcgcatattcataagttgttttcagcttattttcataagc 31420976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 145
Target Start/End: Complemental strand, 34939818 - 34939755
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaa 145  Q
    |||||||||||| || || ||||||||||||||||| ||||| | || || |||||||||||||    
T  34939818 cttatgacatgtccataaattgttttcagcttatttccataaactctccaggatagcttatgaa 34939755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 145
Target Start/End: Original strand, 281841 - 281907
Alignment:
Q  79 caacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaa 145  Q
    |||||||||||||||  | |||||||||||||||||||| ||| ||| ||  | |||||||||||||    
T  281841 caacttatgacatgtctataagttgttttcagcttatttccatgagctctctaggatagcttatgaa 281907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 124
Target Start/End: Complemental strand, 696676 - 696634
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataag 124  Q
    ||||||||||||||| ||| ||||||||||||||| |||||||    
T  696676 cttatgacatgttcataagctgttttcagcttattctcataag 696634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 164
Target Start/End: Complemental strand, 10031809 - 10031723
Alignment:
Q  79 caacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataa-tttaactttatttt 164  Q
    ||||||| ||||| | || |||||||||||| ||||||| | ||||| || ||||| ||||||| |||| || ||||||||||||||    
T  10031809 caacttacgacatatccataagttgttttcatcttatttccttaagctctccaagacagcttataaaaacaattttaactttatttt 10031723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 125
Target Start/End: Original strand, 29296292 - 29296334
Alignment:
Q  83 ttatgacatgttcacaagttgttttcagcttattttcataagc 125  Q
    ||||||||||| || ||||| ||||||||||||||||||||||    
T  29296292 ttatgacatgtccataagttattttcagcttattttcataagc 29296334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 147
Target Start/End: Original strand, 31812036 - 31812074
Alignment:
Q  109 agcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  31812036 agcttattttcataagctctccaagatagcttatgaaaa 31812074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 733171 - 733208
Alignment:
Q  80 aacttatgacatgttcacaagttgttttcagcttattt 117  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  733171 aacttatgacatgtccacaagttgttttcagcatattt 733208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 1498035 - 1497990
Alignment:
Q  102 tgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||| ||||||||||||||| || |||||||| |||||||||    
T  1498035 tgttttcaccttattttcataagctctccaagatagtttatgaaaa 1497990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 1575973 - 1575928
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataa 123  Q
    ||||||||||||||||||| ||| |||||| | |||||||||||||    
T  1575973 acaacttatgacatgttcataagctgtttttaacttattttcataa 1575928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 13907901 - 13907856
Alignment:
Q  102 tgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||| | |||||||||||||| |||||||||||||| ||||||    
T  13907901 tgttttccgtttattttcataagctcttcaagatagcttttgaaaa 13907856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 125
Target Start/End: Original strand, 27909636 - 27909677
Alignment:
Q  84 tatgacatgttcacaagttgttttcagcttattttcataagc 125  Q
    |||||||||| || |||||||||||||||||||| |||||||    
T  27909636 tatgacatgtccataagttgttttcagcttatttccataagc 27909677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 149
Target Start/End: Original strand, 32387073 - 32387118
Alignment:
Q  104 ttttcagcttattttcataagcacttcaagatagcttatgaaaata 149  Q
    |||||||||||||||||||||| |||||  ||| ||||||||||||    
T  32387073 ttttcagcttattttcataagctcttcagaataacttatgaaaata 32387118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 33089580 - 33089515
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||| |||||||| | ||||||||||  ||||||||||||| || |  ||||||||||||||||||    
T  33089580 cttaggacatgtttataagttgttttacgcttattttcataggctccccaagatagcttatgaaaa 33089515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 7785740 - 7785796
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagc 138  Q
    ||||||||||||  | |||||||||||||||||||| ||||||| || ||| |||||    
T  7785740 cttatgacatgtctataagttgttttcagcttatttccataagctctccaaaatagc 7785796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 150
Target Start/End: Original strand, 11600870 - 11600938
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataa 150  Q
    |||||||||||| || ||  | ||||||||||||||||||| || |||||  | |||||||||||||||    
T  11600870 cttatgacatgtccaaaaactattttcagcttattttcataggctcttcagaacagcttatgaaaataa 11600938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 147
Target Start/End: Complemental strand, 13907650 - 13907594
Alignment:
Q  91 tgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||| ||||||| ||||||||||||   || |||||| |||||||||||    
T  13907650 tgttcacaagttattttcagtttattttcataatttctccaagatggcttatgaaaa 13907594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 142
Target Start/End: Original strand, 32577978 - 32578042
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat 142  Q
    |||||||||||||||| |   || |||||||||||||||| |||| || ||||| ||||||||||    
T  32577978 acaacttatgacatgtccttgagctgttttcagcttatttccatatgctcttcaggatagcttat 32578042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 76)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 82 - 137
Target Start/End: Complemental strand, 36139952 - 36139897
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatag 137  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  36139952 cttatgacatgttcacaagctgttttcagcttattttcataagctcttcaagatag 36139897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 82 - 137
Target Start/End: Complemental strand, 36101642 - 36101587
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatag 137  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||    
T  36101642 cttatgacatgttcacaagctgttttcagcttattttcataagctcttcaggatag 36101587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 36887580 - 36887513
Alignment:
Q  80 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||| ||||||||||| ||| |||||||||||||||||||||||  ||||||||| |||||||||||    
T  36887580 aacttttgacatgttcataagatgttttcagcttattttcataagttcttcaagatggcttatgaaaa 36887513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 21367742 - 21367676
Alignment:
Q  82 cttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||| ||||||||| |||||||||||||||||||||||  || ||||||||||||||||||    
T  21367742 cttatgacattgttcacaagctgttttcagcttattttcataagttctccaagatagcttatgaaaa 21367676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 167
Target Start/End: Original strand, 16790394 - 16790459
Alignment:
Q  102 tgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 167  Q
    ||||||||| ||||||||||||||  | |||||||||||||||||||||||| | |||||||||||    
T  16790394 tgttttcagtttattttcataagctatccaagatagcttatgaaaataatttgattttattttatc 16790459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 37273212 - 37273143
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||||||| || |||||||||||| ||||||| ||||||  || ||||||||||||||||||    
T  37273212 acaacttatgacatgtccataagttgttttcaacttatttccataagttctccaagatagcttatgaaaa 37273143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 142
Target Start/End: Original strand, 23808060 - 23808120
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat 142  Q
    |||||||||||||||||| ||||||||| ||||||||||||| | || |||||||||||||    
T  23808060 cttatgacatgttcacaaattgttttcatcttattttcataaactctccaagatagcttat 23808120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 150
Target Start/End: Original strand, 54837030 - 54837098
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataa 150  Q
    ||||||||||||||| || |||||||| ||||||||| ||||||  | |||||||||||||||||||||    
T  54837030 cttatgacatgttcataacttgttttccgcttatttttataagctgtccaagatagcttatgaaaataa 54837098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 84 - 147
Target Start/End: Complemental strand, 20669244 - 20669181
Alignment:
Q  84 tatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||| ||| ||||||| |||||||| ||||||| || ||||||||||||||||||    
T  20669244 tatgacatgttcataagctgttttccgcttatttacataagctctccaagatagcttatgaaaa 20669181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 84 - 143
Target Start/End: Original strand, 33883748 - 33883807
Alignment:
Q  84 tatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatg 143  Q
    ||||||||||||| |||||||||||||||||||||||||||  ||  |||||||||||||    
T  33883748 tatgacatgttcataagttgttttcagcttattttcataagttctctaagatagcttatg 33883807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 141
Target Start/End: Complemental strand, 42745116 - 42745053
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagctta 141  Q
    ||||||||||||||||||| |||||||||||| ||||||| |||||||  || |||||||||||    
T  42745116 acaacttatgacatgttcataagttgttttcatcttatttccataagcttttgaagatagctta 42745053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 82 - 149
Target Start/End: Original strand, 52440658 - 52440725
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 149  Q
    ||||||||||||||| |||||||||||| || |||||||||||  ||||||||||  |||||||||||    
T  52440658 cttatgacatgttcataagttgttttcaactaattttcataagttcttcaagataaattatgaaaata 52440725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 39602201 - 39602271
Alignment:
Q  77 gacaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||| ||||||||||||||| || ||||||||| ||||||||||||||  ||  |||||||||||||||||    
T  39602201 gacagcttatgacatgttcataaattgttttcaacttattttcataagttctcaaagatagcttatgaaaa 39602271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 147
Target Start/End: Complemental strand, 40665500 - 40665438
Alignment:
Q  85 atgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||| ||| ||||||||||||||||| |||||| || ||||||| ||||||||||    
T  40665500 atgacatgttcataagctgttttcagcttatttttataagctctccaagataacttatgaaaa 40665438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 24785279 - 24785214
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||||| |||||||||| ||||||||| ||||||| ||  | |||||||||||||||    
T  24785279 cttatgacatgttcataagttgtttttagcttatttacataagctctcgaggatagcttatgaaaa 24785214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 30573906 - 30573975
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||| ||||| |||||||| ||| |||||||||||||| ||||| ||| || ||||||||||||||||||    
T  30573906 acaaattatggcatgttcataagctgttttcagcttatgttcatcagctctccaagatagcttatgaaaa 30573975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 34924552 - 34924601
Alignment:
Q  100 gttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 149  Q
    |||||||||||||||||||||||||| ||  |||||||||||||||||||    
T  34924552 gttgttttcagcttattttcataagctctctaagatagcttatgaaaata 34924601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 52619081 - 52619012
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||| |||||||||||||| ||| | |||||| |||||||||| |||| |||||||||||||| ||||||    
T  52619081 acaatttatgacatgttcataagctattttcaccttattttcacaagctcttcaagatagcttgtgaaaa 52619012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 78 - 142
Target Start/End: Complemental strand, 36200174 - 36200110
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat 142  Q
    |||||||||||||||| || |||||||||||||||||||| ||| ||| || || ||||||||||    
T  36200174 acaacttatgacatgtccataagttgttttcagcttatttccatgagctctacaggatagcttat 36200110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 150
Target Start/End: Complemental strand, 45541645 - 45541577
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataa 150  Q
    ||||||||||||||| ||| ||||||||| ||||| |||||||   | |||||||||||||||||||||    
T  45541645 cttatgacatgttcataagctgttttcaggttattctcataagttatccaagatagcttatgaaaataa 45541577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 125
Target Start/End: Original strand, 3044251 - 3044298
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagc 125  Q
    ||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  3044251 acaacttatgacatgttcataagctgttttcaacttattttcataagc 3044298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 154
Target Start/End: Original strand, 45432936 - 45433007
Alignment:
Q  83 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataattta 154  Q
    |||||||||||||| |||||||||||||||||||| ||||||| || || |||  ||| |||||| ||||||    
T  45432936 ttatgacatgttcataagttgttttcagcttatttccataagctctacaggatgacttgtgaaaacaattta 45433007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 147
Target Start/End: Original strand, 53736122 - 53736181
Alignment:
Q  88 acatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||| |||||| ||||||||||||||||||| |||||||  |||| |||||||||    
T  53736122 acatgttcataagttgctttcagcttattttcataaacacttcagtataggttatgaaaa 53736181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 104 - 150
Target Start/End: Complemental strand, 2825199 - 2825153
Alignment:
Q  104 ttttcagcttattttcataagcacttcaagatagcttatgaaaataa 150  Q
    |||| ||||||||||||||||| || |||||||||||||||||||||    
T  2825199 ttttaagcttattttcataagctctccaagatagcttatgaaaataa 2825153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 101 - 147
Target Start/End: Original strand, 20502083 - 20502129
Alignment:
Q  101 ttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||||||| |||||||| ||||| |||||||||||||||    
T  20502083 ttgttttcagcttattctcataagctcttcaggatagcttatgaaaa 20502129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 148
Target Start/End: Original strand, 36878753 - 36878819
Alignment:
Q  83 ttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaat 148  Q
    ||||||||| || ||||||  ||||||||||| ||||||||||  ||||||||||||||||||||||    
T  36878753 ttatgacattgtccacaagcggttttcagctttttttcataagttcttcaagatagcttatgaaaat 36878819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 2719526 - 2719477
Alignment:
Q  98 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||| ||||||||||||||||||  || ||||||||||||||||||    
T  2719526 aagttgttctcagcttattttcataagttctccaagatagcttatgaaaa 2719477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 8933861 - 8933796
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||| || ||||||  || ||||||||||||||||| || ||||||| ||||||||||    
T  8933861 cttatgacatgtccaaaagttgcatttagcttattttcataagctctccaagataacttatgaaaa 8933796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 25925818 - 25925773
Alignment:
Q  80 aacttatgacatgttcacaagttgttttcagcttattttcataagc 125  Q
    ||||||||||||||||| ||| |||||||| |||||||||||||||    
T  25925818 aacttatgacatgttcataagctgttttcaacttattttcataagc 25925773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 147
Target Start/End: Original strand, 35394494 - 35394559
Alignment:
Q  83 ttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||| ||||| ||| |||||||| |||||||||||||   |||||||||||||||||||||    
T  35394494 ttatgacattgttcataagctgttttcaacttattttcataaattcttcaagatagcttatgaaaa 35394559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 167
Target Start/End: Complemental strand, 37825196 - 37825111
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 167  Q
    |||||||||||| || ||||||||||||| |||||| ||||||| || || || |||| || |||| |||||||||| || |||||    
T  37825196 cttatgacatgtccataagttgttttcaggttatttccataagctctccaggaaagctaataaaaacaatttaacttgatattatc 37825111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 138
Target Start/End: Original strand, 47249481 - 47249538
Alignment:
Q  81 acttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagc 138  Q
    |||||||||||||||| ||||||||||  |||||||||||||||  || |||||||||    
T  47249481 acttatgacatgttcataagttgtttttggcttattttcataagtcctccaagatagc 47249538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 47513731 - 47513670
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagct 139  Q
    |||| |||||||| ||||| ||||||||||||  |||||||||||||| || ||||||||||    
T  47513731 acaagttatgacacgttcataagttgttttcaatttattttcataagctctccaagatagct 47513670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 50600170 - 50600239
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||| ||||||||| ||| || |||||||||||||||||||||||  || ||| |||||| |||||||    
T  50600170 acaactcatgacatgtccacgagctgttttcagcttattttcataagttctccaatatagctgatgaaaa 50600239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 12985357 - 12985425
Alignment:
Q  98 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttat 166  Q
    ||||||||||| |||||||| ||||||  ||| | ||||||||||||||| | |||| |||||||||||    
T  12985357 aagttgttttcggcttatttccataagttcttgaggatagcttatgaaaacagtttatctttattttat 12985425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 13371175 - 13371127
Alignment:
Q  98 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 146  Q
    |||||||||||||||||||| ||||||| |||||  |||||||||||||    
T  13371175 aagttgttttcagcttatttccataagctcttcataatagcttatgaaa 13371127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 147
Target Start/End: Original strand, 26320107 - 26320163
Alignment:
Q  91 tgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||| ||||||||||||| |||||||| ||||  |||||||| ||||||||||||    
T  26320107 tgttcataagttgttttcagtttattttcgtaagttcttcaagagagcttatgaaaa 26320163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 26479003 - 26478943
Alignment:
Q  98 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactt 158  Q
    |||||||||| | ||||||||||||  | ||| | ||||||||||||||||||||||||||    
T  26479003 aagttgtttttaacttattttcatatactctttaggatagcttatgaaaataatttaactt 26478943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 142
Target Start/End: Complemental strand, 29771916 - 29771852
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat 142  Q
    |||||||| ||||||| || |||||||||||| ||||||| |||||||   ||||||||||||||    
T  29771916 acaacttaggacatgtccataagttgttttcaacttatttccataagcttctcaagatagcttat 29771852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 147
Target Start/End: Original strand, 33965486 - 33965550
Alignment:
Q  84 tatgacatgttcacaagttgttttcagcttattttc-ataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||  || ||||| |||||||||| ||||| |||||| |||||||||||||||||||||    
T  33965486 tatgacatgcccataagttattttcagctttttttccataagctcttcaagatagcttatgaaaa 33965550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 118
Target Start/End: Complemental strand, 41724290 - 41724250
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttatttt 118  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  41724290 acaacttatgacatgtccataagttgttttcagcttatttt 41724250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 1816659 - 1816592
Alignment:
Q  80 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||| |||| | | ||||||||||||||||| |||||| || ||  ||||||||||||||    
T  1816659 aacttatgacattttcataggctgttttcagcttattttgataagctctccagtatagcttatgaaaa 1816592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 166
Target Start/End: Complemental strand, 13413979 - 13413920
Alignment:
Q  107 tcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttat 166  Q
    |||||||||||| ||||||  |||||||||||||||||||| |  |||| ||||||||||    
T  13413979 tcagcttattttgataagctgttcaagatagcttatgaaaacagcttaaatttattttat 13413920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 149
Target Start/End: Original strand, 25453863 - 25453922
Alignment:
Q  90 atgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 149  Q
    ||||||||||| | ||||||||||||||||||||||  | || ||||| |||||||||||    
T  25453863 atgttcacaagctcttttcagcttattttcataagctttccaggatagtttatgaaaata 25453922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 149
Target Start/End: Original strand, 34414796 - 34414847
Alignment:
Q  98 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 149  Q
    |||||||||||||||||||||||||| | || || ||||| |||||||||||    
T  34414796 aagttgttttcagcttattttcataaactctccatgatagtttatgaaaata 34414847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 125
Target Start/End: Complemental strand, 36445899 - 36445856
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagc 125  Q
    |||||||||||||||  ||||||||||| |||||||||||||||    
T  36445899 cttatgacatgttcattagttgttttcatcttattttcataagc 36445856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 125
Target Start/End: Complemental strand, 43115134 - 43115087
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagc 125  Q
    |||||||||||||||| || || ||||||||||||||||| |||||||    
T  43115134 acaacttatgacatgtccataacttgttttcagcttatttccataagc 43115087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 147
Target Start/End: Complemental strand, 51130822 - 51130759
Alignment:
Q  84 tatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||| || |||||| ||||||||||||||||  ||| || || |||||||||||||||    
T  51130822 tatgacatgtccataagttgctttcagcttattttcaatagctctccatgatagcttatgaaaa 51130759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 124
Target Start/End: Complemental strand, 5391953 - 5391911
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataag 124  Q
    ||||||||||||||| ||| |||||||| ||||||||||||||    
T  5391953 cttatgacatgttcataagctgttttcaacttattttcataag 5391911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 124
Target Start/End: Complemental strand, 5396271 - 5396229
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataag 124  Q
    ||||||||||||| | ||| |||||||||||||||||||||||    
T  5396271 cttatgacatgttaataaggtgttttcagcttattttcataag 5396229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 124
Target Start/End: Original strand, 39723236 - 39723278
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataag 124  Q
    ||||||||||||||| ||| ||||||||||||||| |||||||    
T  39723236 cttatgacatgttcataagctgttttcagcttattctcataag 39723278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 147
Target Start/End: Complemental strand, 41633415 - 41633369
Alignment:
Q  101 ttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||||||||||||||| || ||| |||||| |||||||    
T  41633415 ttgttttcagcttattttcataagctctccaaaatagctgatgaaaa 41633369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 49465780 - 49465826
Alignment:
Q  173 atagcttacacataggcgtttttcatgataaatgtttatgctataaa 219  Q
    |||||||||||||| |||||| ||||||||| || ||||||||||||    
T  49465780 atagcttacacataagcgtttctcatgataagtgattatgctataaa 49465826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 1217796 - 1217861
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||| || |||||||||||| |||| |||||||||  ||  | |||||||||||||||    
T  1217796 cttatgacatgtccataagttgttttcatcttactttcataagttctcaaggatagcttatgaaaa 1217861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 150
Target Start/End: Complemental strand, 14145959 - 14145918
Alignment:
Q  109 agcttattttcataagcacttcaagatagcttatgaaaataa 150  Q
    |||||||||||||||| | | |||||||||||||||||||||    
T  14145959 agcttattttcataagtaatccaagatagcttatgaaaataa 14145918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 20170720 - 20170769
Alignment:
Q  98 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||| ||||||||| ||||||| || |||||||||||| |||||    
T  20170720 aagttgtttttagcttatttgcataagctctacaagatagcttaggaaaa 20170769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 21574568 - 21574499
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||||||||| ||| || ||| ||||||||| ||||||| || || | |||||||| ||||    
T  21574568 acaacttatgacatgttcataagctgcttttagcttatttccataagctctccatgttagcttataaaaa 21574499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 34383000 - 34382951
Alignment:
Q  98 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||| ||||||||| |||||  |||| |||||||||||||||    
T  34383000 aagttgttttcatcttattttcttaagcttttcaggatagcttatgaaaa 34382951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 146
Target Start/End: Original strand, 34610801 - 34610866
Alignment:
Q  82 cttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 146  Q
    |||||||||| ||||| |||| |||||||||| |||||||||||  |  |||||||||||||||||    
T  34610801 cttatgacattgttcataagtggttttcagctgattttcataagttcgccaagatagcttatgaaa 34610866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 125
Target Start/End: Complemental strand, 34954154 - 34954113
Alignment:
Q  84 tatgacatgttcacaagttgttttcagcttattttcataagc 125  Q
    |||||||||||||  || ||||||||||||||||||||||||    
T  34954154 tatgacatgttcatgagctgttttcagcttattttcataagc 34954113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 146
Target Start/End: Complemental strand, 41671381 - 41671320
Alignment:
Q  85 atgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 146  Q
    |||||||||  | |||||||||||| |||||||||||||    |||||||||||||||||||    
T  41671381 atgacatgtctataagttgttttcaacttattttcataaatttttcaagatagcttatgaaa 41671320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 167
Target Start/End: Original strand, 46407906 - 46407975
Alignment:
Q  98 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 167  Q
    |||||||||  |||||||||||| |||| | |||  |||||||||||||| | |||||||||| ||||||    
T  46407906 aagttgtttctagcttattttcacaagctcatcacaatagcttatgaaaacagtttaactttactttatc 46407975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 54180776 - 54180841
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||| || |||||||||| |||||||||  |||||| || ||  ||||||||||||||    
T  54180776 cttatgacatgtccataagttgtttttagcttatttatataagctctccataatagcttatgaaaa 54180841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 482784 - 482852
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 146  Q
    ||||||||| ||||| ||| | | | |||||||||||||| ||||| | ||||||||||| ||||||||    
T  482784 acaacttataacatgctcatatgatattttcagcttatttccataaactcttcaagatagtttatgaaa 482852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 2071109 - 2071065
Alignment:
Q  103 gttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||| ||||||||||||||||| |||||  ||||||||||||||    
T  2071109 gtttttagcttattttcataagctcttcatcatagcttatgaaaa 2071065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 147
Target Start/End: Original strand, 2128255 - 2128319
Alignment:
Q  83 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||| ||||||||| ||| ||||||||||||||||||||| |  ||  ||||| |||||||||||    
T  2128255 ttataacatgttcataagctgttttcagcttattttcatacgttctaaaagatggcttatgaaaa 2128319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 136
Target Start/End: Complemental strand, 5166395 - 5166343
Alignment:
Q  84 tatgacatgttcacaagttgttttcagcttattttcataagcacttcaagata 136  Q
    ||||||||||||| ||| |||||||| |||||||||||| || ||| ||||||    
T  5166395 tatgacatgttcataagctgttttcatcttattttcatacgctcttgaagata 5166343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 11040612 - 11040656
Alignment:
Q  84 tatgacatgttcacaagttgttttcagcttattttcataagcact 128  Q
    |||||||||| || ||||||||||| |||||||||||||| ||||    
T  11040612 tatgacatgtccataagttgttttcggcttattttcataaacact 11040656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 131
Target Start/End: Original strand, 20195030 - 20195077
Alignment:
Q  83 ttatgacatgttcacaagttgttttcagcttattttcataagcacttca 131  Q
    ||||||||| |||| |||||||||||||||| ||||||||||| |||||    
T  20195030 ttatgacatattcaaaagttgttttcagctt-ttttcataagctcttca 20195077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 144
Target Start/End: Original strand, 21862177 - 21862233
Alignment:
Q  88 acatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatga 144  Q
    |||||| || |||||||||||||||||||| ||||||| || | |||||||| ||||    
T  21862177 acatgtccataagttgttttcagcttatttccataagctctcccagatagctaatga 21862233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 23793642 - 23793594
Alignment:
Q  98 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 146  Q
    ||||||||||||||||||||  ||||||  | |||||||||||||||||    
T  23793642 aagttgttttcagcttatttctataagctttccaagatagcttatgaaa 23793594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 147
Target Start/End: Original strand, 25447250 - 25447305
Alignment:
Q  91 tgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||| |||||||||||| || ||||||| |  |||||||||||||||||||    
T  25447250 tgttcacaagctgttttcagctttttctcataag-aaatcaagatagcttatgaaaa 25447305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 33405160 - 33405228
Alignment:
Q  80 aacttatgacatgttcacaagttgttttcagcttat-tttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||| ||||||| ||  ||||||| |||||  |||||||||  |||||||||||||||||||||    
T  33405160 aacttatgatatgttcataaactgttttcggcttaactttcataagttcttcaagatagcttatgaaaa 33405228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 37138344 - 37138296
Alignment:
Q  102 tgttttcagcttattttcataagcacttcaagatagcttatgaaaataa 150  Q
    |||||||||||||||||| ||| | ||  ||||||||||||||||||||    
T  37138344 tgttttcagcttattttcctaaactctctaagatagcttatgaaaataa 37138296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 48048975 - 48049043
Alignment:
Q  79 caacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||| ||||||||| || ||| |||||||||||||||| ||||| | |  |||||||||| |||||||    
T  48048975 caactcatgacatgtccataagctgttttcagcttatttccataacctccccaagatagctaatgaaaa 48049043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 142
Target Start/End: Complemental strand, 50952407 - 50952347
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat 142  Q
    ||||||||||||||| ||  |||||| ||||||||| ||||||| || |||||||| ||||    
T  50952407 cttatgacatgttcataaactgttttaagcttatttccataagctctccaagatagtttat 50952347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 6e-18; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 154
Target Start/End: Original strand, 28300297 - 28300367
Alignment:
Q  84 tatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataattta 154  Q
    ||||||||||||  |||||||||||| ||||||||||||||| |||||||||||| |||||||||| ||||    
T  28300297 tatgacatgttcttaagttgttttcaacttattttcataagctcttcaagatagcctatgaaaatagttta 28300367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 23819163 - 23819098
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||| || |||||||||||| |||||||  |||||| |||||||||||||||||||||    
T  23819163 cttatgacatgtccataagttgttttcatcttatttctataagctcttcaagatagcttatgaaaa 23819098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 47800676 - 47800632
Alignment:
Q  103 gttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  47800676 gttttcagcttattttcataagctcttcaagatagcttatgaaaa 47800632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 2996651 - 2996582
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||||||| || ||| | |||||| |||||||||||| || || ||||||||||||||||||    
T  2996651 acaacttatgacatgtccataagcttttttcaacttattttcatacgctctccaagatagcttatgaaaa 2996582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 4471246 - 4471177
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||||| | || ||||||| |||| |||||||||| ||||  ||||||||||||||||||||    
T  4471246 acaacttatgacatatccataagttgtattcaacttattttcagaagcttttcaagatagcttatgaaaa 4471177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 147
Target Start/End: Complemental strand, 17884134 - 17884077
Alignment:
Q  90 atgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||| ||||||||||||||| |||||||||||| || ||| ||||||||||||||    
T  17884134 atgttcataagttgttttcagctaattttcataagctctccaatatagcttatgaaaa 17884077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 167
Target Start/End: Original strand, 21043231 - 21043316
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 167  Q
    ||||||||| ||||| ||| |||||||||  |||||||||| || ||||| ||||||||||||||| | ||||||| || ||||||    
T  21043231 cttatgacacgttcataagctgttttcagtgtattttcatatgctcttcaggatagcttatgaaaacagtttaactataatttatc 21043316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 29263444 - 29263379
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||| ||||||| |||||||||||||||||||| || |||| || || |||||||||||||||    
T  29263444 cttatgatatgttcataagttgttttcagcttatttccacaagctctgcaggatagcttatgaaaa 29263379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 147
Target Start/End: Complemental strand, 47146028 - 47145971
Alignment:
Q  90 atgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||| |||||||||||| ||||||||||||||| |||||||| || |||||||||    
T  47146028 atgttcataagttgttttcaccttattttcataagctcttcaagacagtttatgaaaa 47145971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 52746836 - 52746901
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||| |||||||||| ||| ||||||||||| ||||||||||||  | ||||||||||||||||||    
T  52746836 cttaagacatgttcataagctgttttcagctgattttcataagccttacaagatagcttatgaaaa 52746901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 53673670 - 53673719
Alignment:
Q  98 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||||||||||| ||||||| || ||||||||||||||||||    
T  53673670 aagttgttttcagcttatttacataagctctccaagatagcttatgaaaa 53673719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 166
Target Start/End: Complemental strand, 4500899 - 4500836
Alignment:
Q  103 gttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttat 166  Q
    ||||||||||||||||||||| | || ||| ||||||| |||||| ||||||||||| ||||||    
T  4500899 gttttcagcttattttcataatctctccaaaatagcttttgaaaacaatttaactttgttttat 4500836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 46019623 - 46019690
Alignment:
Q  80 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||||| | |||||||||||| ||||| ||||||||| ||||  |||| ||||||||||    
T  46019623 aacttatgacatgttgataagttgttttcaacttatattcataagctcttcgggataacttatgaaaa 46019690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 149
Target Start/End: Complemental strand, 51630165 - 51630118
Alignment:
Q  102 tgttttcagcttattttcataagcacttcaagatagcttatgaaaata 149  Q
    ||||||||||||||||||||||   |||||||||||||||||||||||    
T  51630165 tgttttcagcttattttcataaattcttcaagatagcttatgaaaata 51630118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 147
Target Start/End: Original strand, 7694009 - 7694071
Alignment:
Q  85 atgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||| |||||||||||||||||||| ||||| | || || |||| ||||||||||    
T  7694009 atgacatgttcataagttgttttcagcttatttccataaactctccaggataacttatgaaaa 7694071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 127
Target Start/End: Complemental strand, 24747390 - 24747348
Alignment:
Q  85 atgacatgttcacaagttgttttcagcttattttcataagcac 127  Q
    |||||||||||| ||||||||||||||||||||||||| ||||    
T  24747390 atgacatgttcataagttgttttcagcttattttcatatgcac 24747348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 4798566 - 4798627
Alignment:
Q  86 tgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||| || ||| |||||| ||||||||| ||||||| || ||||||||||||||||||    
T  4798566 tgacatgtacataagctgttttgagcttatttgcataagctctccaagatagcttatgaaaa 4798627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 18011924 - 18011871
Alignment:
Q  103 gttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaac 156  Q
    ||||| ||||||||||||||| | ||||||||||||||||||||| | ||||||    
T  18011924 gtttttagcttattttcataaactcttcaagatagcttatgaaaacagtttaac 18011871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 18628555 - 18628604
Alignment:
Q  98 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||||||||||| ||||||| || ||||||| ||||||||||    
T  18628555 aagttgttttcagcttatttccataagctctccaagataacttatgaaaa 18628604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 167
Target Start/End: Complemental strand, 35743356 - 35743271
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 167  Q
    ||||||||||||| | ||||||||| || ||||||| ||||| | ||||| ||||| |||||||| || |||  ||||||||||||    
T  35743356 cttatgacatgtttataagttgtttccaacttatttccataaactcttcatgatagtttatgaaagtagtttgcctttattttatc 35743271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 40532586 - 40532655
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||| | ||||||| |||||||||||| ||||||||| || || || ||||| ||||||||||||    
T  40532586 acaacttattatatgttcataagttgttttcatcttattttcgtaggctctccaagacagcttatgaaaa 40532655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 167
Target Start/End: Original strand, 5131262 - 5131335
Alignment:
Q  98 aagttgttttcagcttattttcataagcacttcaagatagctt----atgaaaataatttaactttattttatc 167  Q
    |||||||||||||||||||| ||||||| || || ||||||||    ||||||| | |||||||||||||||||    
T  5131262 aagttgttttcagcttatttccataagctctccaggatagcttttacatgaaaacattttaactttattttatc 5131335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 146
Target Start/End: Complemental strand, 44249359 - 44249295
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 146  Q
    ||||||||||||| | ||||| | |||||||||||||||||| | || |||||||| ||||||||    
T  44249359 cttatgacatgttgataagttttcttcagcttattttcataaactctccaagatagtttatgaaa 44249295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 125
Target Start/End: Complemental strand, 1137786 - 1137743
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagc 125  Q
    ||||||||||||||| ||||||||||||| |||||| |||||||    
T  1137786 cttatgacatgttcataagttgttttcagtttatttccataagc 1137743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 122
Target Start/End: Original strand, 8469374 - 8469413
Alignment:
Q  83 ttatgacatgttcacaagttgttttcagcttattttcata 122  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  8469374 ttatgacatgttcataagttgttttcagcttatttccata 8469413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 165
Target Start/End: Original strand, 25548140 - 25548207
Alignment:
Q  98 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttatttta 165  Q
    |||||||||||| ||||||||||||||| || |   |||| ||||||||| || ||||||||||||||    
T  25548140 aagttgttttcaacttattttcataagctctgctgtatagtttatgaaaacaacttaactttatttta 25548207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 42641635 - 42641702
Alignment:
Q  82 cttatgacatgttcacaagttgtttt-cagcttat-tttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||||||||| |||||| |||||||| |||||||||| |  ||| ||||||||||||||    
T  42641635 cttatgacatgttcacaagctgttttgcagcttatatttcataagctcaccaaaatagcttatgaaaa 42641702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 125
Target Start/End: Complemental strand, 43824357 - 43824314
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagc 125  Q
    |||||| |||||||| |||||||||||||||||||| |||||||    
T  43824357 cttatggcatgttcataagttgttttcagcttatttccataagc 43824314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 117
Target Start/End: Complemental strand, 46401342 - 46401303
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattt 117  Q
    ||||||||||||||||||| ||||||| ||||||||||||    
T  46401342 acaacttatgacatgttcataagttgtattcagcttattt 46401303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 147
Target Start/End: Original strand, 55084483 - 55084542
Alignment:
Q  88 acatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||| ||| || ||||||||||||||||||||| ||  ||||||||| |||||||    
T  55084483 acatgttcataagctggtttcagcttattttcataagctctctaagatagctcatgaaaa 55084542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 147
Target Start/End: Original strand, 825485 - 825551
Alignment:
Q  81 acttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||| |||  |  |||||||||||||||||||||||  || ||| ||||||||||||||    
T  825485 acttatgacatgctcattaactgttttcagcttattttcataagttctccaaaatagcttatgaaaa 825551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 147
Target Start/End: Original strand, 2111073 - 2111111
Alignment:
Q  109 agcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  2111073 agcttattttcataagtccttcaagatagcttatgaaaa 2111111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 124
Target Start/End: Complemental strand, 4691926 - 4691880
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataag 124  Q
    |||||||||||||||  || | |||||||||||||||||||||||||    
T  4691926 acaacttatgacatgcccatatgttgttttcagcttattttcataag 4691880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 147
Target Start/End: Complemental strand, 29778842 - 29778804
Alignment:
Q  109 agcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||||||| ||||||| |||||||||||||    
T  29778842 agcttattttcataagctcttcaaggtagcttatgaaaa 29778804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 147
Target Start/End: Complemental strand, 30631290 - 30631248
Alignment:
Q  105 tttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||||||||||||||||| |||||| | |||||||    
T  30631290 tttcagcttattttcataagcacttccagataggtaatgaaaa 30631248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 53155338 - 53155265
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataattta 154  Q
    ||||||||||||||||  | || ||| |||||||||||||||| |||   |||| ||||||||||||||||| ||||    
T  53155338 acaacttatgacatgtctataaattgctttcagcttattttcacaag---ttcatgatagcttatgaaaatagttta 53155265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 3155657 - 3155612
Alignment:
Q  102 tgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||||||||||| ||  ||||||||||| |||||||||    
T  3155657 tgttttcagcttattttcattagttcttcaagatagtttatgaaaa 3155612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 143
Target Start/End: Complemental strand, 14011288 - 14011247
Alignment:
Q  102 tgttttcagcttattttcataagcacttcaagatagcttatg 143  Q
    |||||||||||||||| ||||||| || ||||||||||||||    
T  14011288 tgttttcagcttatttccataagctctccaagatagcttatg 14011247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 141
Target Start/End: Original strand, 30377433 - 30377470
Alignment:
Q  104 ttttcagcttattttcataagcacttcaagatagctta 141  Q
    |||||||||||||||||||||| || ||||||||||||    
T  30377433 ttttcagcttattttcataagctctccaagatagctta 30377470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 35290203 - 35290248
Alignment:
Q  102 tgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||||||||  ||||| ||| |||||||||||||||||    
T  35290203 tgttttcagcttattttagtaagctcttaaagatagcttatgaaaa 35290248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 125
Target Start/End: Complemental strand, 42461323 - 42461282
Alignment:
Q  84 tatgacatgttcacaagttgttttcagcttattttcataagc 125  Q
    |||||| |||||| |||||| |||||||||||||||||||||    
T  42461323 tatgacgtgttcataagttgatttcagcttattttcataagc 42461282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 154
Target Start/End: Complemental strand, 43932506 - 43932437
Alignment:
Q  85 atgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataattta 154  Q
    ||||||||| || |||||||||||| |||||||||| |||  |||||  ||| |||||||||||| ||||    
T  43932506 atgacatgtccataagttgttttcatcttattttcacaagttcttcagaataacttatgaaaatagttta 43932437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 117
Target Start/End: Complemental strand, 46201424 - 46201387
Alignment:
Q  80 aacttatgacatgttcacaagttgttttcagcttattt 117  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  46201424 aacttatgacatgttcataggttgttttcagcttattt 46201387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 46415784 - 46415853
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||| |||||||||| || ||||||||||||||| |||||  ||||| ||  | |||||||||||||||    
T  46415784 acaacctatgacatgtccataagttgttttcagctaattttactaagctctcgaggatagcttatgaaaa 46415853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 145
Target Start/End: Original strand, 47118979 - 47119024
Alignment:
Q  100 gttgttttcagcttattttcataagcacttcaagatagcttatgaa 145  Q
    |||||||||||||||| ||||||||  |||||||||||| ||||||    
T  47118979 gttgttttcagcttatcttcataagttcttcaagatagcatatgaa 47119024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 49219197 - 49219148
Alignment:
Q  98 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||||||||||| ||||| | ||| ||||||| |||||||||    
T  49219197 aagttgttttcagcttatttccataatctctttaagatagtttatgaaaa 49219148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 52735195 - 52735131
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||| || | ||| |||| ||||||||| ||||||| ||||||||||||||| |||||    
T  52735195 cttatgacatgtccatatgttatttt-agcttatttccataagctcttcaagatagcttacgaaaa 52735131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 488118 - 488186
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 146  Q
    |||||||||||||||| || ||| |||||||| ||||||| | |||   || |||||||||||||||||    
T  488118 acaacttatgacatgtgcataagctgttttcatcttatttacgtaaattctccaagatagcttatgaaa 488186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 2592321 - 2592365
Alignment:
Q  98 aagttgttttcagcttattttcataagcacttcaagatagcttat 142  Q
    |||||||||||||||||||| ||||||| || ||| |||||||||    
T  2592321 aagttgttttcagcttatttccataagctctccaaaatagcttat 2592365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 2874616 - 2874684
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 146  Q
    |||||||||||||||| || ||  | ||||| |||||||| |||||||||| |  ||||||||||||||    
T  2874616 acaacttatgacatgtccataatctattttccgcttatttccataagcactcctggatagcttatgaaa 2874684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 17751160 - 17751200
Alignment:
Q  102 tgttttcagcttattttcataagcacttcaagatagcttat 142  Q
    |||||| ||||||||||||||||| || |||||||||||||    
T  17751160 tgttttaagcttattttcataagctctgcaagatagcttat 17751200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 19250623 - 19250555
Alignment:
Q  79 caacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||||| || ||| || ||||| |||||||| ||| || |||||||||| ||||| ||||    
T  19250623 caacttatgacatgtccataagctgatttcaacttatttttatatgctcttcaagataacttataaaaa 19250555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 123
Target Start/End: Original strand, 48719388 - 48719428
Alignment:
Q  83 ttatgacatgttcacaagttgttttcagcttattttcataa 123  Q
    |||||||||||||  ||| ||||||||||||||||||||||    
T  48719388 ttatgacatgttcgtaagctgttttcagcttattttcataa 48719428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 125
Target Start/End: Original strand, 50569321 - 50569369
Alignment:
Q  78 acaacttatgacatgttcacaagtt-gttttcagcttattttcataagc 125  Q
    |||||||||||||| |||| ||||| |||||||||||||| ||||||||    
T  50569321 acaacttatgacattttcataagtttgttttcagcttattgtcataagc 50569369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 53792629 - 53792585
Alignment:
Q  98 aagttgttttcagcttattttcataagcacttcaagatagcttat 142  Q
    |||||||||||||||||||||||||| | || |||||||| ||||    
T  53792629 aagttgttttcagcttattttcataaactctccaagatagtttat 53792585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 6e-18; HSPs: 70)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 85 - 147
Target Start/End: Original strand, 35379015 - 35379077
Alignment:
Q  85 atgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||| |||||| |||||||||||||||||||||||||||| || ||||||||||||||||||    
T  35379015 atgacttgttcataagttgttttcagcttattttcataagctctccaagatagcttatgaaaa 35379077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 83 - 149
Target Start/End: Complemental strand, 44443394 - 44443328
Alignment:
Q  83 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 149  Q
    |||||| ||||||| ||||||||||||||||||||||||| || ||  |||||||||||||||||||    
T  44443394 ttatgaaatgttcataagttgttttcagcttattttcatatgctctcaaagatagcttatgaaaata 44443328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 14666626 - 14666557
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||||||||| | |||||||||| ||||||||||||||||   ||||||||||| ||||||    
T  14666626 acaacttatgacatgttcataggttgttttcaccttattttcataagcataccaagatagcttgtgaaaa 14666557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 34652028 - 34652097
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||||||| || ||| |||||||| ||||||| ||||||| || ||||||||||||||||||    
T  34652028 acaacttatgacatgtccataagctgttttcaacttatttccataagctctccaagatagcttatgaaaa 34652097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 78 - 143
Target Start/End: Original strand, 43199776 - 43199841
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatg 143  Q
    ||||||| ||||||||| | ||||||||||||||||| |||||||||| || ||||||||||||||    
T  43199776 acaacttgtgacatgtttataagttgttttcagcttaatttcataagccctccaagatagcttatg 43199841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 82 - 149
Target Start/End: Complemental strand, 680577 - 680510
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 149  Q
    ||||||||||||| | ||  ||||||||||||||||||| |||  |||||||||||||||||||||||    
T  680577 cttatgacatgtttataaactgttttcagcttattttcacaagttcttcaagatagcttatgaaaata 680510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 82 - 153
Target Start/End: Original strand, 12313169 - 12313240
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataattt 153  Q
    |||||| |||||||| |||||| ||||| ||||||||||||||| || |||||||||||||| ||| |||||    
T  12313169 cttatgccatgttcataagttgatttcaccttattttcataagctctccaagatagcttatgtaaacaattt 12313240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 43910993 - 43911060
Alignment:
Q  80 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||||||| ||||||||||||||||||| ||| ||||  | ||||||||||| ||||||    
T  43910993 aacttatgacatgttcataagttgttttcagcttattatcacaagctttccaagatagcttttgaaaa 43911060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 104 - 147
Target Start/End: Original strand, 43985021 - 43985064
Alignment:
Q  104 ttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  43985021 ttttcagcttattttcataagctcttcaagatagcttatgaaaa 43985064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 9174894 - 9174824
Alignment:
Q  78 acaacttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||||| ||||| ||| | |||||||||||||||||||||| ||  |||||||||||||||||    
T  9174894 acaacttatgacattgttcataagctattttcagcttattttcataagctctgtaagatagcttatgaaaa 9174824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 9595310 - 9595260
Alignment:
Q  104 ttttcagcttattttcataagcacttcaagatagcttatgaaaataattta 154  Q
    ||||||||||||||||||||||| || ||||||| ||||||||||||||||    
T  9595310 ttttcagcttattttcataagcattttaagatagtttatgaaaataattta 9595260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 1056121 - 1056190
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||||| || || || ||||| ||||||    
T  1056121 acaacttatgacatgttcattagttgttttcagcttgttttcataagctctacatgagagcttgtgaaaa 1056190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 166
Target Start/End: Original strand, 3227698 - 3227763
Alignment:
Q  101 ttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttat 166  Q
    |||||||||||||||||||| || | || ||| |||||||||||||| ||||||||||| ||||||    
T  3227698 ttgttttcagcttattttcaaaatctctccaaaatagcttatgaaaacaatttaactttgttttat 3227763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 29316771 - 29316836
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||||| ||||| |||||||||||||| ||||||  || |||||||||| |||||||    
T  29316771 cttatgacatgttcataagttcttttcagcttatttccataagttctccaagatagctgatgaaaa 29316836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 16867812 - 16867748
Alignment:
Q  83 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||| |||| |||||||||||| ||||||| ||||||| || ||||||||||| ||||||    
T  16867812 ttatgacatattcataagttgttttcaacttatttccataagctctccaagatagcttgtgaaaa 16867748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 15120261 - 15120186
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataattt 153  Q
    |||||||||||||||||||  || |||||| |||||||||| |||||| || || ||||||||| ||||| |||||    
T  15120261 acaacttatgacatgttcattagctgttttaagcttattttgataagctctccatgatagcttacgaaaacaattt 15120186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 125
Target Start/End: Original strand, 41809237 - 41809284
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagc 125  Q
    ||||||||||||||||||| |||||||||| ||||||||| |||||||    
T  41809237 acaacttatgacatgttcataagttgtttttagcttatttccataagc 41809284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 149
Target Start/End: Complemental strand, 41817242 - 41817175
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 149  Q
    ||||||||||||| | || ||||||||||||||||| ||||||| || || ||||| |||||||||||    
T  41817242 cttatgacatgttgataatttgttttcagcttatttccataagctctccaggatagtttatgaaaata 41817175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 26143631 - 26143701
Alignment:
Q  78 acaacttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||| ||| ||||||| ||| |||||||||||||||||||||  || |||| |||||||||||||    
T  26143631 acaacttatgtcattgttcacaggttattttcagcttattttcataagttctccaagttagcttatgaaaa 26143701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 33942229 - 33942159
Alignment:
Q  77 gacaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||||||||||| ||| ||||||||||| |||||||| ||| ||  | ||| |||||||||||    
T  33942229 gacaacttatgacatgttcataagctgttttcagctaattttcattagctctctatgatggcttatgaaaa 33942159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 147
Target Start/End: Original strand, 38078413 - 38078471
Alignment:
Q  89 catgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||| |||||||||| |||| |||| ||||||| || ||||||||||||||||||    
T  38078413 catgttcataagttgttttgagctcatttacataagctctccaagatagcttatgaaaa 38078471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 124
Target Start/End: Original strand, 44606102 - 44606148
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataag 124  Q
    |||||||||||||||| || ||||||||||||||| |||||||||||    
T  44606102 acaacttatgacatgtccataagttgttttcagctgattttcataag 44606148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 1939324 - 1939393
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||||||| || ||| |||||||| ||||||| ||||||| || ||  ||||||||||||||    
T  1939324 acaacttatgacatgtccataagctgttttcaacttatttccataagctctccagtatagcttatgaaaa 1939393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 3067396 - 3067449
Alignment:
Q  103 gttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaac 156  Q
    ||||| ||||||||||||||| | ||||||||||||||||||||| | ||||||    
T  3067396 gtttttagcttattttcataaactcttcaagatagcttatgaaaacagtttaac 3067449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 7871717 - 7871652
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||| ||| ||| ||| |||||||||||||||| ||||||| |||||| | ||||||||||||    
T  7871717 cttatgatatgatcataaggtgttttcagcttatttccataagctcttcaaaagagcttatgaaaa 7871652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 8017508 - 8017443
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||| ||||||| || |||||||| || ||||||||||||  || ||||||||||||||||||    
T  8017508 cttatgatatgttcataatttgttttctgcgtattttcataagttctccaagatagcttatgaaaa 8017443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 149
Target Start/End: Original strand, 9530726 - 9530791
Alignment:
Q  84 tatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 149  Q
    |||||||||| || ||||| |||| |||||| |||||||||| || || |||||||||||||||||    
T  9530726 tatgacatgtccataagttatttttagcttactttcataagctctccaggatagcttatgaaaata 9530791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 32821887 - 32821818
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||||||| || ||| ||||||||| ||||||  |||||| ||| | |||||||||||||||    
T  32821887 acaacttatgacatgtccataagctgttttcagtttatttctataagctctttaggatagcttatgaaaa 32821818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 33941987 - 33941918
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||| ||||| ||| || ||||| |||||| |||||| | || ||||||||||||||||||    
T  33941987 acaacttatgacaagttcataagctgctttcaacttattatcataaactctccaagatagcttatgaaaa 33941918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 43065442 - 43065511
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||||||| || || |||||||||||||||||  |||||| || || |||| ||||||||||    
T  43065442 acaacttatgacatgtccataaattgttttcagcttatttcaataagctctccacgataacttatgaaaa 43065511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 43141949 - 43141880
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||||||  || ||||||||||||  |||||| ||||| | ||||| |||||||||||||||    
T  43141949 acaacttatgacatgcccataagttgttttcattttatttccataaactcttcaggatagcttatgaaaa 43141880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 656789 - 656837
Alignment:
Q  98 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 146  Q
    |||| ||||||| ||||||||||||||| || |||||||||||||||||    
T  656789 aagtagttttcatcttattttcataagctctgcaagatagcttatgaaa 656837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 140
Target Start/End: Original strand, 1893275 - 1893335
Alignment:
Q  80 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagctt 140  Q
    |||||||||||||| || ||||| ||||||||||||||||| |||  || |||||||||||    
T  1893275 aacttatgacatgtacataagttattttcagcttattttcacaagttctccaagatagctt 1893335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 125
Target Start/End: Complemental strand, 12147544 - 12147488
Alignment:
Q  69 ttattttggacaacttatgacatgttcacaagttgttttcagcttattttcataagc 125  Q
    |||||| ||| | ||||||||||||||| || |||||||||| ||||||||||||||    
T  12147544 ttatttgggatagcttatgacatgttcataaattgttttcagtttattttcataagc 12147488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 12464480 - 12464536
Alignment:
Q  93 ttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 149  Q
    |||||||| | ||||||||||||||||| |||  || ||||||||||||||||||||    
T  12464480 ttcacaagcttttttcagcttattttcacaagttctccaagatagcttatgaaaata 12464536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 35485994 - 35485926
Alignment:
Q  79 caacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||| ||||||| ||| ||||||||||| |||| |||| || ||||| |||||||||| ||||    
T  35485994 caacttatgatatgttcataagctgttttcagctcatttccataggctcttcaggatagcttataaaaa 35485926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 147
Target Start/End: Complemental strand, 1810716 - 1810673
Alignment:
Q  104 ttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||||||||||| | |||||||||||||||| ||||    
T  1810716 ttttcagcttattttcataaactcttcaagatagcttataaaaa 1810673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 7928304 - 7928351
Alignment:
Q  91 tgttcacaagttgttttcagcttattttcataagcacttcaagatagc 138  Q
    |||||| |||||||||||||||||||||||||||  || |||||||||    
T  7928304 tgttcataagttgttttcagcttattttcataagttctccaagatagc 7928351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 125
Target Start/End: Original strand, 8820292 - 8820331
Alignment:
Q  86 tgacatgttcacaagttgttttcagcttattttcataagc 125  Q
    ||||||||||||||| |||||||||||||||| |||||||    
T  8820292 tgacatgttcacaagctgttttcagcttatttccataagc 8820331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 147
Target Start/End: Original strand, 10563556 - 10563619
Alignment:
Q  84 tatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||| || ||| | |||||||||||||||| ||||| |||||  ||||||||||||||    
T  10563556 tatgacatgtccataagctattttcagcttattttcttaagctcttcagcatagcttatgaaaa 10563619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 141
Target Start/End: Complemental strand, 12464722 - 12464679
Alignment:
Q  98 aagttgttttcagcttattttcataagcacttcaagatagctta 141  Q
    |||||||| ||||||||||||||||||  |||||||||||||||    
T  12464722 aagttgttctcagcttattttcataagttcttcaagatagctta 12464679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 117
Target Start/End: Original strand, 30538165 - 30538204
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattt 117  Q
    |||||||||||||||| || ||||||||||||||||||||    
T  30538165 acaacttatgacatgtccataagttgttttcagcttattt 30538204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 154
Target Start/End: Original strand, 36863650 - 36863693
Alignment:
Q  111 cttattttcataagcacttcaagatagcttatgaaaataattta 154  Q
    ||||||||||||||| || |||||||||||||||||| ||||||    
T  36863650 cttattttcataagctctccaagatagcttatgaaaacaattta 36863693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 149
Target Start/End: Complemental strand, 42420071 - 42420004
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 149  Q
    |||||| |||||||| || |||||||||||| |||| |||||||  | || |||||||||||||||||    
T  42420071 cttatgtcatgttcataaattgttttcagctcatttccataagctatccaggatagcttatgaaaata 42420004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 1625975 - 1625909
Alignment:
Q  82 cttatgaca-tgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||| |||||| ||| ||||||||||| |||||| ||||  || ||||||||||||||||||    
T  1625975 cttatgacaatgttcataagatgttttcagctgattttcgtaagttctccaagatagcttatgaaaa 1625909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 164
Target Start/End: Complemental strand, 7283074 - 7282988
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttatttt 164  Q
    ||||||||||| |||| || |||||||||||| ||||| | ||||||| || | | |||||||||||||| | ||| |||| |||||    
T  7283074 acaacttatgatatgtccataagttgttttcatcttatatccataagctctcccacatagcttatgaaaacagtttgacttcatttt 7282988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 125
Target Start/End: Complemental strand, 11063561 - 11063519
Alignment:
Q  83 ttatgacatgttcacaagttgttttcagcttattttcataagc 125  Q
    ||||||||||| || |||||||||| |||||||||||||||||    
T  11063561 ttatgacatgtccataagttgtttttagcttattttcataagc 11063519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 147
Target Start/End: Complemental strand, 15978040 - 15977994
Alignment:
Q  101 ttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||||||||||||| | || ||| ||||||||||||||    
T  15978040 ttgttttcagcttattttcataatctctccaaaatagcttatgaaaa 15977994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 26626948 - 26626882
Alignment:
Q  82 cttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||| ||||| ||  ||||||||| |||||||||||||  || ||||||||||||||||||    
T  26626948 cttatgacattgttcataatctgttttcaggttattttcataagttctgcaagatagcttatgaaaa 26626882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 147
Target Start/End: Original strand, 35378531 - 35378593
Alignment:
Q  85 atgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||| |||||| ||||| ||||||||||||||||||||||  | |||||| ||||| |||||    
T  35378531 atgacttgttcataagttattttcagcttattttcataagctatccaagattgcttacgaaaa 35378593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 157
Target Start/End: Original strand, 35993377 - 35993451
Alignment:
Q  83 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaact 157  Q
    ||||||| ||| || || ||||||||||||||||||||||||  ||  | ||||||||||| ||| |||||||||    
T  35993377 ttatgacgtgtccataaattgttttcagcttattttcataagttctctatgatagcttatgcaaacaatttaact 35993451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 40682390 - 40682455
Alignment:
Q  82 cttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||| ||||| |||||||||||| ||||||||||||||  | |||||||| ||||||||||    
T  40682390 cttatgacattgttcataagttgttttcaacttattttcataagttc-tcaagatatcttatgaaaa 40682455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 41144284 - 41144202
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttatttt 164  Q
    ||||||||||||  | |||||||||| ||||||||| || || | || |||| ||||||||||||| |||||  |||||||||    
T  41144284 cttatgacatgtcaataagttgtttttagcttatttccagaaactctccaagttagcttatgaaaacaatttgtctttatttt 41144202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 147
Target Start/End: Complemental strand, 44590089 - 44590043
Alignment:
Q  101 ttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||||||| ||| |||  |||||||||||||||||||||    
T  44590089 ttgttttcagcttattctcacaagttcttcaagatagcttatgaaaa 44590043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 149
Target Start/End: Original strand, 1056371 - 1056416
Alignment:
Q  104 ttttcagcttattttcataagcacttcaagatagcttatgaaaata 149  Q
    ||||||||||||||  |||| | |||||||||||||||||||||||    
T  1056371 ttttcagcttatttctataaactcttcaagatagcttatgaaaata 1056416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 8187445 - 8187514
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||| || ||| |||||||||||||| |||||| ||||| | || || | |||||||||||||    
T  8187445 acaacttatgaaattttcgcaagttgttttcaggttatttccataatctctccatggtagcttatgaaaa 8187514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 11488353 - 11488287
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 146  Q
    |||||||||||  || ||| |||||||||||||||||||| ||||| | || || ||||||||||||||    
T  11488353 acaacttatga--tggtcataagttgttttcagcttatttgcataatctctccaggatagcttatgaaa 11488287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 16398194 - 16398121
Alignment:
Q  77 gacaacttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaata 149  Q
    ||||||||||||||| | ||  ||| |||||||||||||||||||||||  || ||| ||| ||||||||||||    
T  16398194 gacaacttatgacattgctcgtaagctgttttcagcttattttcataagttctccaacataacttatgaaaata 16398121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 19333325 - 19333386
Alignment:
Q  86 tgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||| ||| |||| ||||||||||||||||||| || ||| |||| ||| |||||    
T  19333325 tgacatgttcataagctgttctcagcttattttcataagctctccaatatagtttaagaaaa 19333386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 30552635 - 30552712
Alignment:
Q  78 acaacttatgacatgttcacaagttg-ttttcagcttattttcataagcacttcaagatagcttatgaaaataattta 154  Q
    ||||||||||||||||  | |||||| |||| ||||||||| ||||||| ||  | ||||| ||||||||||||||||    
T  30552635 acaacttatgacatgtcaataagttggtttttagcttatttccataagctctctaggatagtttatgaaaataattta 30552712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 32614940 - 32614985
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataa 123  Q
    ||||||||||||||||||| | ||||||||||| ||||| ||||||    
T  32614940 acaacttatgacatgttcatatgttgttttcagattattctcataa 32614985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 33256814 - 33256749
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||||| ||  |||| |||||||||||||||| |  ||||| ||| |||||||||||    
T  33256814 cttatgacatgttcataaactgttctcagcttattttcatacggtcttcaggatggcttatgaaaa 33256749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 36415666 - 36415734
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||| |||||| || |||||||||||| ||||||||| ||||  || || |||||||||||||||    
T  36415666 acaacttat-acatgtgcataagttgttttcatcttattttcgtaagttctacatgatagcttatgaaaa 36415734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 40158792 - 40158727
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||| | ||||||||||||||||| || ||||||| || ||  ||| ||||||||||    
T  40158792 cttatgacatgtttataagttgttttcagcttaattacataagctctccagaataacttatgaaaa 40158727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 42817368 - 42817437
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||| | |||||||  |||||||||| |||||| || ||||||| |||||  ||||||||||||||    
T  42817368 acaacttacggcatgttcttaagttgtttttagcttacttccataagctcttcagaatagcttatgaaaa 42817437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 147
Target Start/End: Complemental strand, 44644328 - 44644287
Alignment:
Q  106 ttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||||||||||| ||||||||||| || ||||||    
T  44644328 ttcagcttattttcataagctcttcaagatagtttttgaaaa 44644287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 45314946 - 45314901
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataa 123  Q
    |||||||||||||| || | ||||||||||||| ||||||||||||    
T  45314946 acaacttatgacatatttataagttgttttcagtttattttcataa 45314901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 150
Target Start/End: Original strand, 6772516 - 6772584
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataa 150  Q
    ||||||||||  ||| ||| | ||||||||||| |||||||||| || | ||||| |||||||||||||    
T  6772516 cttatgacataatcataagcttttttcagcttactttcataagctctcctagataccttatgaaaataa 6772584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 24097861 - 24097817
Alignment:
Q  103 gttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||||||||||||| || || |||| ||||||||||    
T  24097861 gttttcagcttattttcataagctctccaggataacttatgaaaa 24097817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 43635095 - 43635159
Alignment:
Q  80 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatga 144  Q
    ||||||||||||||    ||| |||||| |||||||||||||||||  |||| ||||||||||||    
T  43635095 aacttatgacatgtctgtaagctgttttaagcttattttcataagcttttcatgatagcttatga 43635159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 17258879 - 17258944
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||||| ||| |||||||||||||||||||||||| ||||| ||||| |||||||||    
T  17258879 cttatgacatgttcataagctgttttcagcttattttcataagctcttcaggatagtttatgaaaa 17258944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 11707128 - 11707064
Alignment:
Q  83 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||| | ||||||||||||||||||||||| |||| || ||||||||||||||||||    
T  11707128 ttatgacatgtttataagttgttttcagcttattttcaaaagctctacaagatagcttatgaaaa 11707064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 80 - 167
Target Start/End: Original strand, 12242704 - 12242791
Alignment:
Q  80 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 167  Q
    |||||||||||||  ||  |||||||||||||||| || ||||||| || |||||||||||||||||| ||||| ||| |||||||||    
T  12242704 aacttatgacatgaacattagttgttttcagcttacttccataagctctccaagatagcttatgaaaacaatttgactctattttatc 12242791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 37611207 - 37611282
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataattt 153  Q
    ||||||| ||||||||||| ||| ||||||||| |||||| ||||||| || |||||||||||||||||| |||||    
T  37611207 acaacttgtgacatgttcataagctgttttcaggttatttccataagctctccaagatagcttatgaaaacaattt 37611282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 37787937 - 37788012
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataattt 153  Q
    ||||||| ||||||||||| ||| ||||||||| |||||| ||||||| || |||||||||||||||||| |||||    
T  37787937 acaacttgtgacatgttcataagctgttttcaggttatttccataagctctccaagatagcttatgaaaacaattt 37788012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 78 - 155
Target Start/End: Original strand, 10125710 - 10125787
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaa 155  Q
    ||||||||||||||||| | ||| |||||||||||||||||||||||| || || | || ||||||||||||| ||||    
T  10125710 acaacttatgacatgttgataaggtgttttcagcttattttcataagctctccatggtaacttatgaaaataacttaa 10125787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 13604845 - 13604910
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||| || | |||||||||| ||||||||||||||| |||||||||| ||||||||||    
T  13604845 cttatgacatgtccatacgttgttttcaacttattttcataagctcttcaagataacttatgaaaa 13604910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 36639596 - 36639531
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||| ||| || |||||||||||  ||||||||||||||| |||||||||||||||||||||    
T  36639596 cttatgacgtgtccataagttgttttcctcttattttcataagctcttcaagatagcttatgaaaa 36639531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 145
Target Start/End: Original strand, 12459993 - 12460060
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaa 145  Q
    ||||||||||||||||||| | ||||||||  |||||||||||||||| || ||||||||||| ||||    
T  12459993 acaacttatgacatgttcatatgttgtttttggcttattttcataagctctgcaagatagcttgtgaa 12460060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 7674726 - 7674657
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||||||| | ||| ||||||||||||||||||| ||   || ||||||||||||||||||    
T  7674726 acaacttatgacatgtttataaggtgttttcagcttattttcacaaattctccaagatagcttatgaaaa 7674657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 10272423 - 10272492
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||||||    |||||||||||||||||||||||||| | || |||||| |||||||||||    
T  10272423 acaacttatgacatgtctgtaagttgttttcagcttattttcataaactctccaagatggcttatgaaaa 10272492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 17368754 - 17368685
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||||||||| | |  ||||||||||||||| ||||| | || ||||||||||||||||||    
T  17368754 acaacttatgacatgttcatatgcagttttcagcttatttccataacctctccaagatagcttatgaaaa 17368685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 147
Target Start/End: Original strand, 4014429 - 4014485
Alignment:
Q  91 tgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||| ||| |||||||||||||||||||||||  || ||||||||||||||||||    
T  4014429 tgttcataagctgttttcagcttattttcataagttctccaagatagcttatgaaaa 4014485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 142
Target Start/End: Complemental strand, 12521602 - 12521542
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat 142  Q
    ||||||| ||||||| ||| |||||||||||||||| ||||||| |||||| |||||||||    
T  12521602 cttatgatatgttcataagctgttttcagcttatttccataagctcttcaaaatagcttat 12521542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 154
Target Start/End: Original strand, 32408588 - 32408660
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataattta 154  Q
    |||||||||||| |  |||||| |||| |||||||| ||||||| ||||| ||||||||||||||||| ||||    
T  32408588 cttatgacatgtccgtaagttggtttctgcttatttccataagctcttcaggatagcttatgaaaatagttta 32408660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 83 - 147
Target Start/End: Original strand, 33533536 - 33533600
Alignment:
Q  83 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||| |||| |||||||||||| ||||||| ||||||| || ||||||||||| ||||||    
T  33533536 ttatgacatattcataagttgttttcaacttatttccataagctctccaagatagcttgtgaaaa 33533600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 125
Target Start/End: Complemental strand, 12467211 - 12467164
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagc 125  Q
    ||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  12467211 acaacttatgacatgtttataagctgttttcagcttattttcataagc 12467164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 25461310 - 25461377
Alignment:
Q  80 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||||||||  || ||||||||||||||||||||||  ||  |||||||| |||||||||    
T  25461310 aacttatgacatgttcattagctgttttcagcttattttcataaatacgccaagataggttatgaaaa 25461377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 80 - 167
Target Start/End: Complemental strand, 985689 - 985600
Alignment:
Q  80 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagctta--tgaaaataatttaactttattttatc 167  Q
    |||||||||||||| ||||||  ||||||||||||||| ||||  | ||||| |||||||||  |||||| | ||| |||||||||||||    
T  985689 aacttatgacatgtccacaagcggttttcagcttatttccatagtctcttcatgatagcttatgtgaaaacagtttgactttattttatc 985600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 9202743 - 9202809
Alignment:
Q  82 cttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||| ||||| ||| ||||| |||||||||||||||||  |||||||||| ||||||||||    
T  9202743 cttatgacattgttcataagctgtttccagcttattttcataagttcttcaagataacttatgaaaa 9202809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 123
Target Start/End: Original strand, 499727 - 499768
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataa 123  Q
    ||||||||||||| |||||||||||||||||||||| |||||    
T  499727 cttatgacatgttaacaagttgttttcagcttatttccataa 499768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 2092537 - 2092606
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||| ||||| || |||||||||||| ||| ||||||||| | ||||||||||| | |||||||    
T  2092537 acaacttatggcatgtccataagttgttttcaactttttttcataaacccttcaagatagttaatgaaaa 2092606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 2568732 - 2568667
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||| |||| ||||| |||| ||||||||||||| ||| || || |||||||||||||||    
T  2568732 cttatgacatattcataagttatttttagcttattttcattagctctccatgatagcttatgaaaa 2568667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 7319020 - 7319069
Alignment:
Q  98 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||| ||||||||||||||||||  || ||||||||||||||||||    
T  7319020 aagttgttctcagcttattttcataagttctccaagatagcttatgaaaa 7319069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 135
Target Start/End: Complemental strand, 8090014 - 8089957
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagat 135  Q
    ||||||||||| || |||  ||| |||||||||||||||||||||||| |||||||||    
T  8090014 acaacttatgatatattcctaagctgttttcagcttattttcataagctcttcaagat 8089957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 18543193 - 18543257
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||| ||  |||||||||||||||| |||||||||| || || |||||||||||||||    
T  18543193 cttatgacatgtccatgagttgttttcagctta-tttcataagctctccaggatagcttatgaaaa 18543257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 18906400 - 18906351
Alignment:
Q  98 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||||||||||||  ||||||  ||||||||||||||||||||    
T  18906400 aagttgttttcagcttatttcgataagcttttcaagatagcttatgaaaa 18906351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 21768193 - 21768258
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||| || | | |||||||| ||||||||| ||||| |||||||||| ||||||||||    
T  21768193 cttatgacatgtccatacgctgttttcaacttattttcgtaagctcttcaagataacttatgaaaa 21768258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 26209409 - 26209474
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||| ||||| |||||| ||||||||| |||||  ||||| ||||||| |||||||||||||||    
T  26209409 cttatggcatgtccacaagctgttttcagattattcgcataaacacttcatgatagcttatgaaaa 26209474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 41957447 - 41957512
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||| || |||||||||||| ||||||||||||||  ||  | |||||||||||||||    
T  41957447 cttatgacatgtccataagttgttttcatcttattttcataagttctcaaggatagcttatgaaaa 41957512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 147
Target Start/End: Original strand, 5284445 - 5284509
Alignment:
Q  83 ttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||| || ||| | |||||||||||||||||| ||| ||||| |||||| ||||||||    
T  5284445 ttatgacatgtccataagcttttttcagcttattttcattagctcttcatgatagcctatgaaaa 5284509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 147
Target Start/End: Complemental strand, 7985034 - 7984978
Alignment:
Q  91 tgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||| ||| ||||||||||||||||||||||   || ||||||||||||||||||    
T  7985034 tgttcataagctgttttcagcttattttcataaattctccaagatagcttatgaaaa 7984978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 38104869 - 38104917
Alignment:
Q  98 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 146  Q
    |||||||||||||||||||| ||||||| ||  ||||||||||||||||    
T  38104869 aagttgttttcagcttatttccataagctctctaagatagcttatgaaa 38104917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 38829647 - 38829695
Alignment:
Q  97 caagttgttttcagcttattttcataagcacttcaagatagcttatgaa 145  Q
    |||| ||||||| || ||||||||||||| |||||||||||||||||||    
T  38829647 caagctgttttcggcatattttcataagctcttcaagatagcttatgaa 38829695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 147
Target Start/End: Complemental strand, 3237156 - 3237102
Alignment:
Q  93 ttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||| ||||||| |||||| ||||||||||||| ||| | |||||||||||||||    
T  3237156 ttcataagttgtgttcagcatattttcataagctctttaggatagcttatgaaaa 3237102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 147
Target Start/End: Complemental strand, 7907944 - 7907890
Alignment:
Q  93 ttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||| ||||||||||||||||| |||||||||| || ||||| ||||||| ||||    
T  7907944 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaa 7907890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 144
Target Start/End: Complemental strand, 32545108 - 32545046
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatga 144  Q
    ||||||||||||  ||||  | ||||||| |||||||||||||| || |||||||||||||||    
T  32545108 cttatgacatgtctacaatctattttcagattattttcataagctctccaagatagcttatga 32545046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 39105539 - 39105473
Alignment:
Q  82 cttatgacat-gttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||| ||||| ||| | |||| ||||||||||||||||  || ||||||||||||||||||    
T  39105539 cttatgacattgttcataagctatttttagcttattttcataagttctccaagatagcttatgaaaa 39105473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 123
Target Start/End: Complemental strand, 1899228 - 1899187
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataa 123  Q
    |||||||||||| || |||||||||||||||||||| |||||    
T  1899228 cttatgacatgtgcataagttgttttcagcttatttccataa 1899187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 11700370 - 11700415
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataa 123  Q
    |||||||||||||||| || ||| ||||||||| ||||||||||||    
T  11700370 acaacttatgacatgtccataagctgttttcagattattttcataa 11700415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 12425629 - 12425580
Alignment:
Q  98 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||| ||||||||||||||  || ||||||||||| ||||||    
T  12425629 aagttgttttcaacttattttcataagttctccaagatagcttgtgaaaa 12425580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 32172731 - 32172662
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||||||| || |||   |||||||||||||| ||| ||  ||||| |||||||||||||||    
T  32172731 acaacttatgacatgtccataagccattttcagcttatttccattagttcttcatgatagcttatgaaaa 32172662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 32194073 - 32194134
Alignment:
Q  80 aacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagctta 141  Q
    |||||||||||| | || ||||||||||||||||||||  |||||| ||  |||||||||||    
T  32194073 aacttatgacatttccataagttgttttcagcttatttatataagctctcaaagatagctta 32194134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 32897535 - 32897466
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    ||||||||||| || |||| ||  ||||||| |||||||||||||||| |||  ||||||| ||||||||    
T  32897535 acaacttatgatattttcataacctgttttctgcttattttcataagctctttgagatagcgtatgaaaa 32897466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 125
Target Start/End: Complemental strand, 35963313 - 35963272
Alignment:
Q  84 tatgacatgttcacaagttgttttcagcttattttcataagc 125  Q
    |||||||||| || |||||||||||||||||||| |||||||    
T  35963313 tatgacatgtccataagttgttttcagcttatttccataagc 35963272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 167
Target Start/End: Original strand, 36774703 - 36774788
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatttaactttattttatc 167  Q
    |||||||||||| |  ||| || ||||||||||||| ||||||| || || |||||||||| |||| | ||| ||||| |||||||    
T  36774703 cttatgacatgtcctaaagatggtttcagcttatttccataagctctccaggatagcttataaaaacagtttgactttgttttatc 36774788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 39594865 - 39594816
Alignment:
Q  98 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaaa 147  Q
    |||||||||||||||||||||||||||  |  ||||||| ||||||||||    
T  39594865 aagttgttttcagcttattttcataagttcaacaagatatcttatgaaaa 39594816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 1465032 - 1465076
Alignment:
Q  98 aagttgttttcagcttattttcataagcacttcaagatagcttat 142  Q
    ||||||||||||||||||||||| |||  || |||||||||||||    
T  1465032 aagttgttttcagcttattttcacaagtcctccaagatagcttat 1465076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 8177528 - 8177584
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagc 138  Q
    ||||||| |||| || ||||||||||||| |||||||||||||| || || ||||||    
T  8177528 cttatgatatgtccataagttgttttcaggttattttcataagctctccaggatagc 8177584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 125
Target Start/End: Complemental strand, 10303867 - 10303827
Alignment:
Q  85 atgacatgttcacaagttgttttcagcttattttcataagc 125  Q
    ||||||||| || |||||||| |||||||||||||||||||    
T  10303867 atgacatgtccataagttgttgtcagcttattttcataagc 10303827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 154
Target Start/End: Original strand, 13264101 - 13264172
Alignment:
Q  82 cttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttatgaaaataattta 154  Q
    |||||| ||| |||| ||| ||||||||||||||||| |||||| ||||| |||||| | |||||||| ||||    
T  13264101 cttatgccatattcataagctgttttcagcttatttt-ataagctcttcatgatagcatgtgaaaatagttta 13264172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 149
Target Start/End: Original strand, 18637039 - 18637083
Alignment:
Q  105 tttcagcttattttcataagcacttcaagatagcttatgaaaata 149  Q
    |||||||||||||||||||   ||||||||||||| |||||||||    
T  18637039 tttcagcttattttcataatatcttcaagatagctaatgaaaata 18637083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 149
Target Start/End: Original strand, 19460405 - 19460449
Alignment:
Q  105 tttcagcttattttcataagcacttcaagatagcttatgaaaata 149  Q
    ||||||||||||||||||||  ||| |||||| ||||||||||||    
T  19460405 tttcagcttattttcataagttcttgaagataacttatgaaaata 19460449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 20028502 - 20028550
Alignment:
Q  98 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 146  Q
    ||||||||||||||||||||  |||||| |||||  |||||||||||||    
T  20028502 aagttgttttcagcttatttctataagctcttcataatagcttatgaaa 20028550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 167
Target Start/End: Original strand, 29116966 - 29117033
Alignment:
Q  102 tgttttcagcttattttcataagcacttcaagatagcttat--gaaaataatttaactttattttatc 167  Q
    |||||||||||||||| |||||||  |||| ||||||||||  ||||| | ||| |||||||||||||    
T  29116966 tgttttcagcttatttgcataagcttttcaggatagcttatacgaaaacagtttgactttattttatc 29117033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 142
Target Start/End: Original strand, 4927 - 4991
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagcttat 142  Q
    ||||||||| ||||||||| |||||||||||||||||  | ||||||| || |||| ||||||||    
T  4927 acaacttataacatgttcataagttgttttcagcttaactccataagctctccaaggtagcttat 4991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 140
Target Start/End: Original strand, 12696 - 12758
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaagatagctt 140  Q
    |||||||||||||||| || |||||||||||||||||  | ||||||| ||  ||||||||||    
T  12696 acaacttatgacatgtccataagttgttttcagcttagctccataagctctctaagatagctt 12758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 33639 - 33687
Alignment:
Q  98 aagttgttttcagcttattttcataagcacttcaagatagcttatgaaa 146  Q
    |||||||||||||||||||| ||||||| |||||  |||||||||||||    
T  33639 aagttgttttcagcttatttccataagctcttcataatagcttatgaaa 33687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 133
Target Start/End: Original strand, 10609 - 10664
Alignment:
Q  78 acaacttatgacatgttcacaagttgttttcagcttattttcataagcacttcaag 133  Q
    |||||| ||||||||| || |||||||||||||||||||| ||||| |||| ||||    
T  10609 acaactaatgacatgtccataagttgttttcagcttatttccataaacactacaag 10664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 14666 - 14614
Alignment:
Q  100 gttgttttcagcttattttcataagcacttcaagatagcttatgaaaataatt 152  Q
    ||||||||||||||||||| |||| | ||||||||||  |||| |||||||||    
T  14666 gttgttttcagcttatttttataaactcttcaagatattttataaaaataatt 14614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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