View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4528_low_2 (Length: 343)
Name: NF4528_low_2
Description: NF4528
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4528_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 280; Significance: 1e-157; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 18 - 333
Target Start/End: Original strand, 32313579 - 32313894
Alignment:
| Q |
18 |
ataaggaggtgtaaaaacctgtgatttcattaaaatctggctgctaggtgccacctaaccaaatctttcaaaaccttcaatttcttatcaacaacagtta |
117 |
Q |
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| T |
32313579 |
ataaggaggtgtaaaaacctgtgatttcattaaaatctggctgctaggtgccacctaaccaaatctttcaaaaccttcaatttcttatcaacaacagtta |
32313678 |
T |
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| Q |
118 |
ccagataattgactcatggaaaactacaatacaacttgtccaataatttgatttgannnnnnnnaagaagcaaatcaattatattaaagataatctaata |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||| |
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| T |
32313679 |
ccagataattgactcatggaaaactacaatacaacttgtccaataatttgattttattttttttaagaagcaaatcaactatattaaagataatctaata |
32313778 |
T |
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| Q |
218 |
aataagcataaggcatgttttttggtaaataaaaagcaccaggtccatttcttgttaacttgaaactacatagtggctaggaccactaaaaacaataata |
317 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32313779 |
aataagcataagacatgttttttggtaaataaaaagcaccaggtccatttcttgttaacttgaaactacatagtggctaggaccactaaaaacaataata |
32313878 |
T |
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| Q |
318 |
acattcagcacctatg |
333 |
Q |
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|||||||||||||||| |
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| T |
32313879 |
acattcagcacctatg |
32313894 |
T |
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