View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4528_low_8 (Length: 238)
Name: NF4528_low_8
Description: NF4528
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4528_low_8 |
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Alignment Details
Target: chr6 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 18 - 217
Target Start/End: Original strand, 1216226 - 1216425
Alignment:
| Q |
18 |
atgttttgttttgtcgcttcagatatggaagtagatccaaaagatttaaaacgcaaagtacaatttgaggagggagtgttcaacaagaaacctcgccttc |
117 |
Q |
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| T |
1216226 |
atgttttgttttgtcgcttcagatatggaagtagatccaaaagatttaaaacgcagagtacaatttgaggagggagtgttcaacaagaaacctcgccttc |
1216325 |
T |
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| Q |
118 |
taatatttcatttaaggtagtacaaaaatactaatatgttatgcgttcttaaagaagcatatgcttatataaacatgtacttatgtacgtatgcattcat |
217 |
Q |
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| T |
1216326 |
taacatttcgtttaaggtagtacaaaaatactaatatgttatgcgttcttaaagaagcatatgcttatataaacatgtacttacgtacgtatgcattcat |
1216425 |
T |
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