View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4529-Insertion-12 (Length: 48)
Name: NF4529-Insertion-12
Description: NF4529
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4529-Insertion-12 |
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| [»] chr2 (2 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 42; Significance: 8e-16; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 42; E-Value: 8e-16
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 11849470 - 11849511
Alignment:
| Q |
7 |
aggggtttcatcaagtctcggatccataggtttcatgattgg |
48 |
Q |
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| T |
11849470 |
aggggtttcatcaagtctcggatccataggtttcatgattgg |
11849511 |
T |
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Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 11844741 - 11844782
Alignment:
| Q |
7 |
aggggtttcatcaagtctcggatccataggtttcatgattgg |
48 |
Q |
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||||||||||||||||||||||||||||||||||||| |||| |
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| T |
11844741 |
aggggtttcatcaagtctcggatccataggtttcatggttgg |
11844782 |
T |
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