View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4530-Insertion-1 (Length: 1032)

Name: NF4530-Insertion-1
Description: NF4530
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4530-Insertion-1
NF4530-Insertion-1
[»] chr7 (39 HSPs)
chr7 (8-558)||(45702846-45703397)
chr7 (556-836)||(45702530-45702810)
chr7 (836-906)||(20091196-20091266)
chr7 (833-906)||(25010542-25010615)
chr7 (837-906)||(29077335-29077404)
chr7 (837-906)||(48983756-48983825)
chr7 (837-905)||(23550988-23551056)
chr7 (836-906)||(10329326-10329396)
chr7 (837-906)||(12596207-12596276)
chr7 (840-903)||(8171460-8171523)
chr7 (837-904)||(18776683-18776750)
chr7 (837-906)||(24525599-24525668)
chr7 (837-905)||(26254110-26254178)
chr7 (837-906)||(47984885-47984954)
chr7 (837-905)||(28749827-28749895)
chr7 (839-906)||(8239802-8239869)
chr7 (851-906)||(40357311-40357366)
chr7 (661-719)||(25408400-25408458)
chr7 (661-730)||(3321914-3321983)
chr7 (661-730)||(7073037-7073106)
chr7 (837-906)||(19692210-19692279)
chr7 (933-1029)||(10955483-10955579)
chr7 (926-1029)||(20091281-20091384)
chr7 (926-1029)||(24525685-24525788)
chr7 (661-719)||(25403643-25403701)
chr7 (931-1029)||(48983849-48983947)
chr7 (980-1029)||(25010432-25010481)
chr7 (837-906)||(38414793-38414862)
chr7 (929-1029)||(18776769-18776869)
chr7 (926-1029)||(23551070-23551174)
chr7 (929-1029)||(29077219-29077319)
chr7 (929-1028)||(19692094-19692193)
chr7 (837-903)||(10955605-10955671)
chr7 (666-766)||(21985950-21986050)
chr7 (838-906)||(33162257-33162325)
chr7 (926-1029)||(47984969-47985073)
chr7 (666-745)||(24272856-24272935)
chr7 (984-1029)||(8239686-8239731)
chr7 (984-1029)||(38414934-38414979)
[»] chr6 (28 HSPs)
chr6 (836-1029)||(17353956-17354143)
chr6 (837-906)||(27788608-27788677)
chr6 (837-906)||(30832443-30832512)
chr6 (837-905)||(13727317-13727385)
chr6 (837-905)||(21280665-21280733)
chr6 (837-1029)||(20711638-20711824)
chr6 (836-906)||(24710913-24710983)
chr6 (837-906)||(27314097-27314166)
chr6 (836-906)||(235142-235212)
chr6 (839-904)||(1155767-1155832)
chr6 (843-896)||(19987277-19987330)
chr6 (661-730)||(22348101-22348170)
chr6 (837-905)||(21479615-21479683)
chr6 (847-1029)||(28075785-28075964)
chr6 (838-905)||(33774238-33774305)
chr6 (661-730)||(13881725-13881794)
chr6 (661-730)||(17691978-17692047)
chr6 (661-730)||(25944655-25944724)
chr6 (932-1029)||(33774119-33774216)
chr6 (661-730)||(35203189-35203258)
chr6 (929-1029)||(27788692-27788792)
chr6 (929-1029)||(13727403-13727503)
chr6 (929-1029)||(21479496-21479596)
chr6 (984-1029)||(24711058-24711103)
chr6 (837-904)||(19737612-19737678)
chr6 (982-1025)||(27994775-27994818)
chr6 (837-871)||(12083030-12083064)
chr6 (666-719)||(24434270-24434323)
[»] chr4 (53 HSPs)
chr4 (837-1029)||(34027583-34027768)
chr4 (837-906)||(54083160-54083229)
chr4 (836-906)||(32915506-32915576)
chr4 (837-906)||(16882313-16882382)
chr4 (837-906)||(32128705-32128774)
chr4 (837-1028)||(37777140-37777325)
chr4 (837-905)||(55255379-55255447)
chr4 (843-906)||(38352189-38352252)
chr4 (836-906)||(40089645-40089715)
chr4 (836-906)||(54780899-54780969)
chr4 (837-905)||(2790659-2790727)
chr4 (848-1029)||(43455460-43455634)
chr4 (841-906)||(1105652-1105717)
chr4 (837-906)||(24969717-24969786)
chr4 (836-904)||(10428115-10428183)
chr4 (841-904)||(47129109-47129172)
chr4 (836-906)||(16845142-16845211)
chr4 (837-906)||(17679520-17679589)
chr4 (837-906)||(19498622-19498691)
chr4 (837-905)||(34768492-34768560)
chr4 (837-900)||(5128758-5128821)
chr4 (851-905)||(35465227-35465281)
chr4 (837-906)||(10979023-10979092)
chr4 (837-906)||(16922245-16922314)
chr4 (929-1029)||(10978904-10979004)
chr4 (929-1029)||(32128588-32128688)
chr4 (837-897)||(48209376-48209436)
chr4 (929-1029)||(54780781-54780881)
chr4 (608-730)||(15315250-15315372)
chr4 (853-904)||(23508443-23508494)
chr4 (931-1029)||(2790746-2790844)
chr4 (661-730)||(4568329-4568398)
chr4 (661-730)||(16637147-16637216)
chr4 (980-1029)||(24969441-24969490)
chr4 (851-904)||(38209522-38209575)
chr4 (853-905)||(2975358-2975410)
chr4 (929-1029)||(34768577-34768677)
chr4 (929-1029)||(38209594-38209694)
chr4 (837-892)||(13460305-13460360)
chr4 (836-906)||(37514781-37514849)
chr4 (986-1027)||(24396940-24396981)
chr4 (980-1029)||(38352309-38352358)
chr4 (853-906)||(51964831-51964884)
chr4 (666-766)||(3791089-3791189)
chr4 (837-897)||(9578575-9578635)
chr4 (136-208)||(15314749-15314821)
chr4 (973-1029)||(40089520-40089575)
chr4 (934-1029)||(13460211-13460306)
chr4 (926-1029)||(54083242-54083345)
chr4 (840-906)||(35779248-35779314)
chr4 (973-1027)||(35779373-35779426)
chr4 (833-871)||(45560071-45560109)
chr4 (931-1025)||(35465115-35465208)
[»] chr1 (44 HSPs)
chr1 (837-1029)||(17168966-17169151)
chr1 (833-906)||(19955843-19955916)
chr1 (837-906)||(40501707-40501776)
chr1 (837-906)||(6771920-6771989)
chr1 (837-906)||(51607358-51607427)
chr1 (836-904)||(21740851-21740919)
chr1 (837-905)||(27906646-27906714)
chr1 (837-906)||(6889736-6889805)
chr1 (837-906)||(6891582-6891651)
chr1 (837-906)||(14146426-14146495)
chr1 (837-906)||(22865378-22865447)
chr1 (840-904)||(13913401-13913465)
chr1 (926-1029)||(27559647-27559750)
chr1 (836-906)||(5027677-5027747)
chr1 (837-897)||(9172940-9173000)
chr1 (837-897)||(9180922-9180982)
chr1 (837-905)||(44655868-44655936)
chr1 (843-906)||(16140181-16140244)
chr1 (834-906)||(3406545-3406617)
chr1 (834-906)||(3440203-3440275)
chr1 (854-906)||(41697072-41697124)
chr1 (840-904)||(50881557-50881621)
chr1 (608-730)||(2396381-2396503)
chr1 (835-906)||(5316806-5316877)
chr1 (851-906)||(34247153-34247208)
chr1 (661-730)||(9524714-9524783)
chr1 (837-906)||(23185553-23185622)
chr1 (926-1029)||(9173023-9173126)
chr1 (926-1029)||(9181005-9181108)
chr1 (837-897)||(1366797-1366857)
chr1 (929-1029)||(1366881-1366981)
chr1 (837-905)||(4971536-4971604)
chr1 (929-1029)||(5316690-5316790)
chr1 (929-1029)||(23185437-23185537)
chr1 (929-1029)||(44655751-44655851)
chr1 (926-1029)||(19955727-19955830)
chr1 (926-1027)||(40501790-40501891)
chr1 (848-905)||(44895775-44895832)
chr1 (973-1026)||(51607488-51607540)
chr1 (973-1029)||(4971666-4971721)
chr1 (666-766)||(47701993-47702093)
chr1 (984-1027)||(38547094-38547137)
chr1 (985-1027)||(43235829-43235871)
chr1 (984-1029)||(44895662-44895707)
[»] chr8 (33 HSPs)
chr8 (837-906)||(42600898-42600967)
chr8 (836-906)||(10917506-10917576)
chr8 (837-1029)||(23798179-23798365)
chr8 (837-906)||(23606548-23606617)
chr8 (837-906)||(37430076-37430145)
chr8 (837-905)||(2952137-2952205)
chr8 (840-906)||(13534609-13534675)
chr8 (840-906)||(13624149-13624215)
chr8 (837-906)||(20003728-20003797)
chr8 (837-906)||(41879295-41879364)
chr8 (837-906)||(45475932-45476001)
chr8 (837-905)||(3048435-3048503)
chr8 (661-730)||(21040416-21040485)
chr8 (840-905)||(30883447-30883512)
chr8 (661-730)||(4814352-4814421)
chr8 (661-730)||(28893750-28893819)
chr8 (929-1029)||(23606633-23606733)
chr8 (926-1029)||(42600781-42600884)
chr8 (851-905)||(5860674-5860728)
chr8 (661-730)||(16754386-16754455)
chr8 (661-730)||(28330881-28330950)
chr8 (931-1027)||(15167421-15167517)
chr8 (929-1029)||(45475816-45475916)
chr8 (926-1029)||(10917390-10917493)
chr8 (986-1027)||(15078759-15078800)
chr8 (661-730)||(25682893-25682962)
chr8 (973-1029)||(13534735-13534790)
chr8 (973-1029)||(13624275-13624330)
chr8 (666-766)||(26401306-26401406)
chr8 (973-1029)||(30883328-30883383)
chr8 (673-719)||(40827259-40827305)
chr8 (982-1027)||(5942697-5942742)
chr8 (837-882)||(33963268-33963313)
[»] chr2 (34 HSPs)
chr2 (837-906)||(27506659-27506728)
chr2 (837-1029)||(24410435-24410623)
chr2 (836-906)||(26716244-26716314)
chr2 (837-905)||(4506010-4506078)
chr2 (837-905)||(8906996-8907064)
chr2 (833-904)||(12337361-12337432)
chr2 (836-905)||(3155333-3155402)
chr2 (837-906)||(29939781-29939850)
chr2 (840-904)||(6965122-6965186)
chr2 (841-905)||(40636253-40636317)
chr2 (840-906)||(10762488-10762554)
chr2 (837-904)||(3953121-3953188)
chr2 (929-1027)||(29939866-29939964)
chr2 (837-906)||(8327732-8327801)
chr2 (837-906)||(9046144-9046213)
chr2 (837-905)||(1396617-1396685)
chr2 (929-1029)||(10762569-10762669)
chr2 (608-730)||(2739138-2739260)
chr2 (843-906)||(5952642-5952705)
chr2 (840-906)||(34694089-34694155)
chr2 (840-906)||(34716501-34716567)
chr2 (661-730)||(17935070-17935139)
chr2 (661-730)||(20051887-20051956)
chr2 (661-730)||(22714360-22714429)
chr2 (661-730)||(39685233-39685302)
chr2 (973-1029)||(9046027-9046082)
chr2 (837-904)||(7162900-7162967)
chr2 (974-1029)||(26716126-26716180)
chr2 (666-743)||(31058012-31058089)
chr2 (973-1029)||(6965005-6965060)
chr2 (929-1029)||(12337452-12337552)
chr2 (666-766)||(39486167-39486267)
chr2 (666-745)||(39484809-39484888)
chr2 (837-871)||(3400140-3400174)
[»] chr5 (32 HSPs)
chr5 (837-1029)||(16198709-16198895)
chr5 (837-1029)||(38869279-38869464)
chr5 (837-906)||(16799240-16799309)
chr5 (837-906)||(27079128-27079197)
chr5 (837-906)||(36187795-36187864)
chr5 (836-906)||(7671049-7671119)
chr5 (837-905)||(15480006-15480074)
chr5 (837-1029)||(9364290-9364476)
chr5 (837-906)||(22986473-22986542)
chr5 (838-906)||(28822253-28822321)
chr5 (841-906)||(19523315-19523380)
chr5 (837-906)||(27924198-27924267)
chr5 (837-906)||(31194528-31194597)
chr5 (845-902)||(40389461-40389518)
chr5 (842-906)||(2275006-2275070)
chr5 (837-905)||(16591990-16592058)
chr5 (929-1029)||(30854328-30854428)
chr5 (845-905)||(34756289-34756349)
chr5 (837-906)||(31881348-31881417)
chr5 (929-1029)||(23284063-23284163)
chr5 (929-1029)||(28822343-28822443)
chr5 (840-906)||(30854445-30854511)
chr5 (927-1029)||(40389535-40389637)
chr5 (932-1029)||(16799331-16799428)
chr5 (837-906)||(23283943-23284012)
chr5 (661-730)||(25450743-25450812)
chr5 (929-1029)||(16592075-16592175)
chr5 (929-1029)||(34756367-34756467)
chr5 (851-906)||(7338115-7338170)
chr5 (556-745)||(24558430-24558619)
chr5 (556-745)||(24599462-24599651)
chr5 (984-1025)||(36868932-36868973)
[»] scaffold0070 (1 HSPs)
scaffold0070 (837-906)||(1458-1527)
[»] chr3 (44 HSPs)
chr3 (837-906)||(47467803-47467872)
chr3 (837-906)||(50939152-50939221)
chr3 (835-906)||(48720427-48720498)
chr3 (836-906)||(34290553-34290623)
chr3 (837-906)||(8073257-8073326)
chr3 (841-906)||(37168486-37168551)
chr3 (837-906)||(54407073-54407142)
chr3 (837-899)||(29620364-29620426)
chr3 (837-906)||(21582891-21582960)
chr3 (837-905)||(27078486-27078554)
chr3 (837-905)||(27084283-27084351)
chr3 (837-905)||(38681011-38681079)
chr3 (836-906)||(43207156-43207226)
chr3 (836-905)||(36715941-36716010)
chr3 (841-906)||(44708595-44708660)
chr3 (837-905)||(50258542-50258610)
chr3 (840-906)||(36606083-36606149)
chr3 (837-905)||(53506802-53506869)
chr3 (837-905)||(54619121-54619189)
chr3 (932-1031)||(8073345-8073444)
chr3 (851-906)||(18372601-18372656)
chr3 (843-905)||(48157248-48157310)
chr3 (661-730)||(10095932-10096001)
chr3 (661-730)||(10202818-10202887)
chr3 (661-730)||(10899995-10900064)
chr3 (929-1029)||(9878691-9878791)
chr3 (929-1029)||(43207242-43207341)
chr3 (926-1029)||(34290637-34290740)
chr3 (837-904)||(42098922-42098989)
chr3 (926-1029)||(44708479-44708582)
chr3 (838-904)||(3953816-3953882)
chr3 (661-719)||(10609910-10609968)
chr3 (661-731)||(47880014-47880084)
chr3 (661-730)||(16460450-16460519)
chr3 (661-730)||(54191494-54191563)
chr3 (929-1029)||(54619207-54619307)
chr3 (926-1029)||(53506885-53506988)
chr3 (840-906)||(53149235-53149301)
chr3 (980-1029)||(48157141-48157190)
chr3 (973-1029)||(21582773-21582828)
chr3 (973-1029)||(42098803-42098858)
chr3 (926-1029)||(50939234-50939337)
chr3 (873-906)||(9878642-9878675)
chr3 (926-1019)||(54407159-54407252)
[»] scaffold0039 (1 HSPs)
scaffold0039 (836-1029)||(106537-106724)
[»] scaffold0209 (1 HSPs)
scaffold0209 (661-731)||(268-338)
[»] scaffold0001 (1 HSPs)
scaffold0001 (837-906)||(183175-183244)
[»] scaffold1320 (1 HSPs)
scaffold1320 (986-1027)||(1355-1396)
[»] scaffold1590 (1 HSPs)
scaffold1590 (931-1027)||(264-360)
[»] scaffold0559 (1 HSPs)
scaffold0559 (673-719)||(4835-4881)
[»] scaffold0097 (1 HSPs)
scaffold0097 (926-1027)||(38926-39027)


Alignment Details
Target: chr7 (Bit Score: 490; Significance: 0; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 490; E-Value: 0
Query Start/End: Original strand, 8 - 558
Target Start/End: Complemental strand, 45703397 - 45702846
Alignment:
Q  8 ttcataactttggcgttcatgcatatcaagcaagaaaagattgatggtagggttgtaaaacgtgccttctttaatttggttatattgaacgagcaagaat 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  45703397 ttcataactttggcgttcatgcatatcaagcaagaaaagattgatggtagggttgtaaaacgtgtcttctttaatttggttatattgaacgagcaagaat 45703298  T
Q  108 tacaagttgctgataatggaaaaagagaaggatcaggatttattataagcataaatattatttttgatgagaccaatatgtggatgaagtgcaaggacct 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45703297 tacaagttgctgataatggaaaaagagaaggatcaggatttattataagcataaatattatttttgatgagaccaatatgtggatgaagtgcaaggacct 45703198  T
Q  208 attgaatattcactcagaaacaaagtagaagaaaacatagtttgagttggagccttccactagtgagacaagagacaaagaagagggtgagactcctcca 307  Q
    | |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45703197 actgaatattcactcagaaacaaagtagaagaaaacttagtttgagttggagccttccactagtgagacaagagacaaagaagagggtgagactcctcca 45703098  T
Q  308 tcaa--atactagaggaagacaaacaacaacggattttgaccatcaattggatagagatgaggaatatagggatattgttccaccaataagatatcgctt 405  Q
    ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  45703097 tcaaatatactagaggaagacaaacaacaacggattttgaccatcaattggatagagatgaggaatatagggatattgttccaccaataagatatggctt 45702998  T
Q  406 tgttgttcatattttttatgctctaaatgcagatgaaaggttgaaaaacttagaaacaaaggccttcaaaaaagcatttgagagcaatgagagtctaaaa 505  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  45702997 tgttgtccatattttttatgctctaaatgcggatgaaaggttgaaaaacttagaaacaaaggccttcaagaaagcatttgagagcaatgagagtctgaaa 45702898  T
Q  506 tagtttgaaggccattaacgaggaaattcattcattggagatgaactgacttg 558  Q
    |||||| |||||||| || |||||||||||||||||||||||||||| |||||    
T  45702897 tagttt-aaggccatgaatgaggaaattcattcattggagatgaactaacttg 45702846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 237; E-Value: 1e-130
Query Start/End: Original strand, 556 - 836
Target Start/End: Complemental strand, 45702810 - 45702530
Alignment:
Q  556 ttggatgtaagtagatcttcaagaacaaagaaggtatttagagaattaaagaaccaaagtataaaacaagagttgtggctaagggtttttctcgggttaa 655  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  45702810 ttggatgtaagtggatcttcaagaacaaggaaggtatttagagaattaaagaaccaaagtataaaacaagagttgtggctaagggtttttcccgggttaa 45702711  T
Q  656 gagatttgattacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatgaagattgttaatcagtacaatcttgaaatggaatta 755  Q
    ||||||||||||||||||||||||| ||||| |||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  45702710 gagatttgattacaatgagattttcgcatcgatggtaaaatattattttataagggtacttatgaagattgtaaatcagtacaatcttgaaatggaatta 45702611  T
Q  756 atgaatgtgaaacatggtttgaagaagagagctggaagatggaaactactccttgtccaaacaggataggaagcaagtata 836  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||    
T  45702610 atgaatgtgaaacatggtttgaagaagagagctggaagatggaaactactccttgtcctaacgggataggaagcatgtata 45702530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 836 - 906
Target Start/End: Original strand, 20091196 - 20091266
Alignment:
Q  836 acagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20091196 acagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacg 20091266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 833 - 906
Target Start/End: Complemental strand, 25010615 - 25010542
Alignment:
Q  833 tatacagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||    
T  25010615 tatacagggccgtccctaagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacg 25010542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 837 - 906
Target Start/End: Complemental strand, 29077404 - 29077335
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29077404 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacg 29077335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 837 - 906
Target Start/End: Original strand, 48983756 - 48983825
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  48983756 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggccaatgataaaatcaaaacg 48983825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 23550988 - 23551056
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaac 905  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23550988 cagggtcgtccctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaac 23551056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 836 - 906
Target Start/End: Original strand, 10329326 - 10329396
Alignment:
Q  836 acagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  10329326 acagggccgttcctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacg 10329396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 837 - 906
Target Start/End: Original strand, 12596207 - 12596276
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  12596207 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacg 12596276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 840 - 903
Target Start/End: Original strand, 8171460 - 8171523
Alignment:
Q  840 ggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaa 903  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8171460 ggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaa 8171523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 837 - 904
Target Start/End: Original strand, 18776683 - 18776750
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaa 904  Q
    ||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  18776683 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggtcagtgataaaatcaaaa 18776750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 837 - 906
Target Start/End: Original strand, 24525599 - 24525668
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||    
T  24525599 cagggtcgtccctaagaattcggaggctcggctctgggaatgaaaagaggcctgtgataaaatcaaaacg 24525668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 26254178 - 26254110
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaac 905  Q
    |||||| |||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  26254178 cagggctgtccctgagaattcggaggctcggctttgggaatgaaaagaggtcagtgataaaatcaaaac 26254110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 837 - 906
Target Start/End: Original strand, 47984885 - 47984954
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||||||||||||||||||  |||||||||||| ||||||||||| | |||||||||||||||||||    
T  47984885 cagggccgtccctaagaattcgttggctcggctctgggaatgaaaagatgccagtgataaaatcaaaacg 47984954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 28749895 - 28749827
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaac 905  Q
    ||||||||||||| | |||||||||||||||||||| ||||||||||||  || |||||||||||||||    
T  28749895 cagggccgtccctgaaaattcggaggctcggctctgggaatgaaaagagaccaatgataaaatcaaaac 28749827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 839 - 906
Target Start/End: Complemental strand, 8239869 - 8239802
Alignment:
Q  839 gggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||||||||||||||| |||||||||||||||  |||||||||||| || ||||||||| ||||||    
T  8239869 gggccgtccctaagaatttggaggctcggctctggaaatgaaaagaggccaatgataaaatgaaaacg 8239802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 851 - 906
Target Start/End: Original strand, 40357311 - 40357366
Alignment:
Q  851 agaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||||||||||||||||||  |||||||| |||||||||||||||||||||||    
T  40357311 agaattcggaggctcggctctggaaatgaaaaaaggtcagtgataaaatcaaaacg 40357366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 661 - 719
Target Start/End: Original strand, 25408400 - 25408458
Alignment:
Q  661 ttgattacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatg 719  Q
    ||||||||||||| || || |||||||||||||||||||||| ||||||||||||||||    
T  25408400 ttgattacaatgaaatcttttcatcggtggtaaaacattgttctataagggtacttatg 25408458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 661 - 730
Target Start/End: Complemental strand, 3321983 - 3321914
Alignment:
Q  661 ttgattacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatgaagattgttaa 730  Q
    ||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||||  |||||||||    
T  3321983 ttgattacaatgaaatcttttcaccggtggtaaaacattgttctataagggtacttatggcgattgttaa 3321914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 661 - 730
Target Start/End: Original strand, 7073037 - 7073106
Alignment:
Q  661 ttgattacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatgaagattgttaa 730  Q
    ||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||||  |||||||||    
T  7073037 ttgattacaatgaaatcttttcaccggtggtaaaacattgttctataagggtacttatggcgattgttaa 7073106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 837 - 906
Target Start/End: Complemental strand, 19692279 - 19692210
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||| |||||||||||||||| |||||||||||  ||||||||| |  |||||||||||||||||||    
T  19692279 cagggccctccctaagaattcggaagctcggctctggaaatgaaaagtgtccagtgataaaatcaaaacg 19692210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 933 - 1029
Target Start/End: Complemental strand, 10955579 - 10955483
Alignment:
Q  933 atgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacccc 1029  Q
    |||||||||||||||||||       |||||||| ||||  ||||||||| ||||||||||| | ||||||||||||| |||||||||||||||||||    
T  10955579 atgttctatttatattttttaaaagataaatataaggtgccgtatatatg-cggtacactcagaggtgaaaatgactaccgtatacatgaggaacccc 10955483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 926 - 1029
Target Start/End: Original strand, 20091281 - 20091384
Alignment:
Q  926 aaaagcaatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgagga 1024  Q
    |||| ||||| |||||||||||||||       |||||||| ||||  ||||||||| |||||||| |||| ||||||||||||| ||||||||||||||    
T  20091281 aaaaacaatgatctatttatattttttaaaagataaatataaggtgccgtatatatg-cggtacacccaaaggtgaaaatgactaccgtatacatgagga 20091379  T
Q  1025 acccc 1029  Q
    |||||    
T  20091380 acccc 20091384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 926 - 1029
Target Start/End: Original strand, 24525685 - 24525788
Alignment:
Q  926 aaaagcaatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgagga 1024  Q
    |||| |||||||||||||||||||||       |||||||| ||||  || |||||| |||||||| |||| ||||||||||||| ||||||||||||||    
T  24525685 aaaaacaatgttctatttatattttttaaaagataaatataaggtgccgtgtatatg-cggtacacccaaaagtgaaaatgactaccgtatacatgagga 24525783  T
Q  1025 acccc 1029  Q
    |||||    
T  24525784 acccc 24525788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 661 - 719
Target Start/End: Original strand, 25403643 - 25403701
Alignment:
Q  661 ttgattacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatg 719  Q
    ||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||||    
T  25403643 ttgattacaatgaaatcttttcaccggtggtaaaacattgttctataagggtacttatg 25403701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 931 - 1029
Target Start/End: Original strand, 48983849 - 48983947
Alignment:
Q  931 caatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacccc 1029  Q
    ||||| |||||||||||||||       |||||||| ||||| ||||||||| |||||||| |||| |||||||| |||| |||||||||||||||||||    
T  48983849 caatgatctatttatattttttaaaagataaatataaggtgtcgtatatatg-cggtacacccaaaggtgaaaataactaccgtatacatgaggaacccc 48983947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 980 - 1029
Target Start/End: Complemental strand, 25010481 - 25010432
Alignment:
Q  980 tggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacccc 1029  Q
    ||||||||||| |||| ||||||||||||| |||||||||||||||||||    
T  25010481 tggcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccc 25010432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 837 - 906
Target Start/End: Original strand, 38414793 - 38414862
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||| |||||||||||||||||||||||| |||||  |||||||||||   ||| ||||||||||||||    
T  38414793 cagggtcgtccctaagaattcggaggctcgactctggaaatgaaaagagactagtcataaaatcaaaacg 38414862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 929 - 1029
Target Start/End: Original strand, 18776769 - 18776869
Alignment:
Q  929 agcaatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacc 1027  Q
    |||||||||||||||||||||||       |||||| | ||||  ||||||||| |||||||| || ||||||||||||||| |||||||||||| ||||    
T  18776769 agcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatg-cggtacacccagatgtgaaaatgactaccgtatacatgagaaacc 18776867  T
Q  1028 cc 1029  Q
    ||    
T  18776868 cc 18776869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 926 - 1029
Target Start/End: Original strand, 23551070 - 23551174
Alignment:
Q  926 aaaagcaatgttctatttatatttttnnnnnnn-taaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgagg 1023  Q
    |||||||||| |||||||||||||||        |||||||| ||||| ||||||||| |||||||  |||| ||||||||||||| |||||||||||||    
T  23551070 aaaagcaatgatctatttatatttttttaaaagataaatataaggtgtcgtatatatg-cggtacatccaaaggtgaaaatgactaccgtatacatgagg 23551168  T
Q  1024 aacccc 1029  Q
    ||||||    
T  23551169 aacccc 23551174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 929 - 1029
Target Start/End: Complemental strand, 29077319 - 29077219
Alignment:
Q  929 agcaatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacc 1027  Q
    |||||||||||||||||||||||       |||||| | ||||| ||||||||| ||||||||  | | ||||||||||||| |||||||||||||||||    
T  29077319 agcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatg-cggtacaccaagaggtgaaaatgactaccgtatacatgaggaacc 29077221  T
Q  1028 cc 1029  Q
    ||    
T  29077220 cc 29077219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 929 - 1028
Target Start/End: Complemental strand, 19692193 - 19692094
Alignment:
Q  929 agcaatgttctatttatatttttnnnnnnntaaatatagggtgtg-tatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacc 1027  Q
    |||||||||||||||||||||||       |||||||| ||||   |||||||| ||||||||  ||| |||||||||||| ||||||||||||||||||    
T  19692193 agcaatgttctatttatattttttaaaagataaatataaggtgccatatatatg-cggtacacctaaaggtgaaaatgactttcgtatacatgaggaacc 19692095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 837 - 903
Target Start/End: Complemental strand, 10955671 - 10955605
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaa 903  Q
    |||||| |||| | ||||||||||||||| |||| | ||||||| ||||||||||||| ||||||||    
T  10955671 cagggctgtccatgagaattcggaggctcagctcggggaatgaatagaggtcagtgattaaatcaaa 10955605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 666 - 766
Target Start/End: Complemental strand, 21986050 - 21985950
Alignment:
Q  666 tacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatgaagattgttaatcagtacaatcttgaaatggaattaatgaatgtga 765  Q
    ||||||||||| |||||| ||||||| ||||||||||  |||||| ||||||||   ||||| ||||| | |||||||||  |||||  |||| ||||||    
T  21986050 tacaatgagatcttctcaccggtggtgaaacattgttccataaggatacttatggctattgtgaatcaattcaatcttgagttggaacaaatggatgtga 21985951  T
Q  766 a 766  Q
    |    
T  21985950 a 21985950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 838 - 906
Target Start/End: Original strand, 33162257 - 33162325
Alignment:
Q  838 agggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||| | |||||||||||||||  |||| |||| || ||||||||||||| ||||||||| ||||||    
T  33162257 agggccattcctaagaattcggagattcggttctgggagtgaaaagaggtcaatgataaaattaaaacg 33162325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 926 - 1029
Target Start/End: Original strand, 47984969 - 47985073
Alignment:
Q  926 aaaagcaatgttctatttatatttttnnnnnnntaaa-tatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgagg 1023  Q
    ||||||||||||||||||||||||||        ||| |||| ||||  ||||||||| |||||||| |||| ||||||||||| | |||||||||||||    
T  47984969 aaaagcaatgttctatttatatttttttaaaagaaaaatataaggtgccgtatatatg-cggtacacccaaaggtgaaaatgaccaccgtatacatgagg 47985067  T
Q  1024 aacccc 1029  Q
    ||||||    
T  47985068 aacccc 47985073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 666 - 745
Target Start/End: Original strand, 24272856 - 24272935
Alignment:
Q  666 tacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatgaagattgttaatcagtacaatcttga 745  Q
    ||||||||||| |||||| ||||||| ||||||||||  |||||| ||||||||   ||||| ||||| | |||||||||    
T  24272856 tacaatgagatcttctcaccggtggtgaaacattgttccataaggatacttatggctattgtgaatcaattcaatcttga 24272935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 984 - 1029
Target Start/End: Complemental strand, 8239731 - 8239686
Alignment:
Q  984 ggtacactcaaatgtgaaaatgactatcgtatacatgaggaacccc 1029  Q
    ||||||| ||||||||||||||| || |||||| ||||||||||||    
T  8239731 ggtacacccaaatgtgaaaatgattaccgtatatatgaggaacccc 8239686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 984 - 1029
Target Start/End: Original strand, 38414934 - 38414979
Alignment:
Q  984 ggtacactcaaatgtgaaaatgactatcgtatacatgaggaacccc 1029  Q
    ||||||| |||| |||||||||||||  ||||||||||||||||||    
T  38414934 ggtacacccaaaggtgaaaatgactactgtatacatgaggaacccc 38414979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 3e-32; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 836 - 1029
Target Start/End: Complemental strand, 17354143 - 17353956
Alignment:
Q  836 acagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacgnnnnnnnnnnnnnnnnnnnaaaagcaatg 935  Q
    ||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||                   ||||||||||    
T  17354143 acagggccgtccctaagaattcggaggctcgactcttggaatgaaaagaggtcagtgataaaatcaaaacg------tattttttttaaaaaaagcaatg 17354050  T
Q  936 ttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacccc 1029  Q
    ||||||||||||||||       |||||||| ||||| |||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||    
T  17354049 ttctatttatattttttaaaagataaatataaggtgtcgtatatat-gcggtacacccaaatgtgaaaatgactatcgtatacatgatgaacccc 17353956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 837 - 906
Target Start/End: Original strand, 27788608 - 27788677
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  27788608 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacg 27788677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 837 - 906
Target Start/End: Original strand, 30832443 - 30832512
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||||||||| |||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||    
T  30832443 cagggccgtccctgagaattcgaaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacg 30832512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 13727317 - 13727385
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaac 905  Q
    ||||||||||||| ||||||||||||||||||||||  |||||||||||| ||||||||||||||||||    
T  13727317 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaac 13727385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 21280733 - 21280665
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaac 905  Q
    ||||||||||||| ||||||||||||||||||||||  |||||||||||| ||||||||||||||||||    
T  21280733 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaac 21280665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 837 - 1029
Target Start/End: Original strand, 20711638 - 20711824
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacgnnnnnnnnnnnnnnnnnnnaaaagcaatgt 936  Q
    ||||| ||||||| ||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||                   || ||||||||    
T  20711638 cagggacgtccctgagaattcggaggctcggttctgggaatgaaaagaggtcagtcataaaatcaaaacg------tatttttttttaaaagagcaatgt 20711731  T
Q  937 tctatttatatttttnnnnnnntaaatatagggtg-tgtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacccc 1029  Q
    |||||||||||||||       |||||||| ||||  |||||||| ||||||||| |||| ||||||||||||| |||||||||||||||||||    
T  20711732 tctatttatattttttaaaagataaatataaggtgccgtatatat-gcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccc 20711824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 836 - 906
Target Start/End: Original strand, 24710913 - 24710983
Alignment:
Q  836 acagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||||||||||| ||||||||||||||| |||| | |||||||||||||| ||||||||||||||||||    
T  24710913 acagggccgtccctgagaattcggaggctcagctcagggaatgaaaagaggttagtgataaaatcaaaacg 24710983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 837 - 906
Target Start/End: Original strand, 27314097 - 27314166
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||||||||| | |||||||||||||| ||||| ||||||||||||| |||||||||||||||||||    
T  27314097 cagggccgtccctgaaaattcggaggctcgactctgggaatgaaaagaggccagtgataaaatcaaaacg 27314166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 836 - 906
Target Start/End: Original strand, 235142 - 235212
Alignment:
Q  836 acagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||| || |||||||||||||||||| |||||| |||||||||||||||  |||||||||||||||||||    
T  235142 acaggaccatccctaagaattcggaggttcggctatgagaatgaaaagagaccagtgataaaatcaaaacg 235212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 839 - 904
Target Start/End: Original strand, 1155767 - 1155832
Alignment:
Q  839 gggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaa 904  Q
    ||||||||||||| |||| |||||||||| |||  |||||||||||||||||||||||||||||||    
T  1155767 gggccgtccctaaaaatttggaggctcggttctaggaatgaaaagaggtcagtgataaaatcaaaa 1155832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 843 - 896
Target Start/End: Complemental strand, 19987330 - 19987277
Alignment:
Q  843 cgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataa 896  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  19987330 cgtccctaagaattcggaggatcggctctcagaatgaaaagaggtcagtgataa 19987277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 661 - 730
Target Start/End: Complemental strand, 22348170 - 22348101
Alignment:
Q  661 ttgattacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatgaagattgttaa 730  Q
    ||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||||| |||||||||    
T  22348170 ttgattacaatgaaatcttttcaccggtggtaaaacattgttctataagggtacttatgacgattgttaa 22348101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 21479683 - 21479615
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaac 905  Q
    |||||||||| || |||||| |||||||||||||||  |||||||||||| ||||||||||||||||||    
T  21479683 cagggccgtctctgagaatttggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaac 21479615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 847 - 1029
Target Start/End: Complemental strand, 28075964 - 28075785
Alignment:
Q  847 cctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacgnnnnnnnnnnnnnnnnnnnaaaagcaatgttctatttata 946  Q
    |||||||||| ||||||||||||||| ||||||||||||| |||||| ||||||||||||                   |||||||||||||||||||||    
T  28075964 cctaagaatttggaggctcggctctgggaatgaaaagaggccagtgaaaaaatcaaaacgtattttttttatttta---aaaagcaatgttctatttata 28075868  T
Q  947 tttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacccc 1029  Q
    |||||       |||||||| ||||  ||||||||| || ||||| |||| ||||||||||||| |||||||||||||||||||    
T  28075867 ttttttaaaagataaatataaggtgccgtatatatg-cgatacacccaaaggtgaaaatgactaccgtatacatgaggaacccc 28075785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 838 - 905
Target Start/End: Complemental strand, 33774305 - 33774238
Alignment:
Q  838 agggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaac 905  Q
    |||||| ||| | ||||||||||||||||||||||| |||||||||||| |||| |||||||||||||    
T  33774305 agggccatccttgagaattcggaggctcggctctgaaaatgaaaagaggccagtaataaaatcaaaac 33774238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 661 - 730
Target Start/End: Original strand, 13881725 - 13881794
Alignment:
Q  661 ttgattacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatgaagattgttaa 730  Q
    ||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||||  |||||||||    
T  13881725 ttgattacaatgaaatcttttcaccggtggtaaaacattgttctataagggtacttatggcgattgttaa 13881794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 661 - 730
Target Start/End: Complemental strand, 17692047 - 17691978
Alignment:
Q  661 ttgattacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatgaagattgttaa 730  Q
    ||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||||  |||||||||    
T  17692047 ttgattacaatgaaatcttttcaccggtggtaaaacattgttctataagggtacttatggcgattgttaa 17691978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 661 - 730
Target Start/End: Original strand, 25944655 - 25944724
Alignment:
Q  661 ttgattacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatgaagattgttaa 730  Q
    ||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||||  |||||||||    
T  25944655 ttgattacaatgaaatcttttcaccggtggtaaaacattgttctataagggtacttatggcgattgttaa 25944724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 932 - 1029
Target Start/End: Complemental strand, 33774216 - 33774119
Alignment:
Q  932 aatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacccc 1029  Q
    ||||||||||||||||||||       |||||| | ||||  ||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||    
T  33774216 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatg-cggtacacccaaatgtgaaaatgactaccgtatacatgaggaacccc 33774119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 661 - 730
Target Start/End: Complemental strand, 35203258 - 35203189
Alignment:
Q  661 ttgattacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatgaagattgttaa 730  Q
    ||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||||  |||||||||    
T  35203258 ttgattacaatgaaatcttttcaccggtggtaaaacattgttctataagggtacttatggcgattgttaa 35203189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 929 - 1029
Target Start/End: Original strand, 27788692 - 27788792
Alignment:
Q  929 agcaatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacc 1027  Q
    |||||| ||||||||||||||||       |||||||| ||||  ||||||||| |||||||| |||| ||||||||||||| |||||||||||||||||    
T  27788692 agcaattttctatttatattttttaaaagataaatataaggtgccgtatatatg-cggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 27788790  T
Q  1028 cc 1029  Q
    ||    
T  27788791 cc 27788792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 929 - 1029
Target Start/End: Original strand, 13727403 - 13727503
Alignment:
Q  929 agcaatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacc 1027  Q
    |||||||||||||||||||||||       |||||| | ||||  ||||||||| |||||||| || | ||||||||||||| |||||||||||||||||    
T  13727403 agcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatg-cggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 13727501  T
Q  1028 cc 1029  Q
    ||    
T  13727502 cc 13727503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 929 - 1029
Target Start/End: Complemental strand, 21479596 - 21479496
Alignment:
Q  929 agcaatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacc 1027  Q
    |||||||||||||||||||||||       |||||| | ||||  ||||||||| |||||||| || | ||||||||||||| |||||||||||||||||    
T  21479596 agcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatg-cggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 21479498  T
Q  1028 cc 1029  Q
    ||    
T  21479497 cc 21479496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 984 - 1029
Target Start/End: Original strand, 24711058 - 24711103
Alignment:
Q  984 ggtacactcaaatgtgaaaatgactatcgtatacatgaggaacccc 1029  Q
    |||||||||| | ||||||||||||| |||||||||||||||||||    
T  24711058 ggtacactcagaggtgaaaatgactaccgtatacatgaggaacccc 24711103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 837 - 904
Target Start/End: Original strand, 19737612 - 19737678
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaa 904  Q
    ||||| ||||||| |||||| | ||| |||||||| || ||||||||||| |||||||||||||||||    
T  19737612 cagggtcgtccctgagaatttgaaggttcggctct-aggatgaaaagaggccagtgataaaatcaaaa 19737678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 982 - 1025
Target Start/End: Complemental strand, 27994818 - 27994775
Alignment:
Q  982 gcggtacactcaaatgtgaaaatgactatcgtatacatgaggaa 1025  Q
    |||||||||||||| |||||||| |||| |||||||||||||||    
T  27994818 gcggtacactcaaaggtgaaaatcactaccgtatacatgaggaa 27994775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 837 - 871
Target Start/End: Original strand, 12083030 - 12083064
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctct 871  Q
    |||||||||||||||| ||||||||||||||||||    
T  12083030 cagggccgtccctaagtattcggaggctcggctct 12083064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 666 - 719
Target Start/End: Original strand, 24434270 - 24434323
Alignment:
Q  666 tacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatg 719  Q
    ||||||||||| |||||| ||||||| ||||||||||  |||||| ||||||||    
T  24434270 tacaatgagatattctcaccggtggtgaaacattgttccataaggatacttatg 24434323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 3e-29; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 837 - 1029
Target Start/End: Complemental strand, 34027768 - 34027583
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacgnnnnnnnnnnnnnnnnnnnaaaagcaatgt 936  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||                   |||||||||||    
T  34027768 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacg-------tatttttttaaaaaaagcaatgt 34027676  T
Q  937 tctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacccc 1029  Q
    |||||||||||||||       |||||||| ||||| |||||||| ||||||||| |||| |||||||||||||  ||||||||||||||||||    
T  34027675 tctatttatattttttaaaagataaatataaggtgtcgtatatat-gcggtacacccaaaggtgaaaatgactacggtatacatgaggaacccc 34027583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 837 - 906
Target Start/End: Original strand, 54083160 - 54083229
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54083160 cagggccgtccctaaaaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 54083229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 836 - 906
Target Start/End: Complemental strand, 32915576 - 32915506
Alignment:
Q  836 acagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  32915576 acagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacg 32915506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 837 - 906
Target Start/End: Original strand, 16882313 - 16882382
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||    
T  16882313 cagggccgtccctaagaattcggaggctcggctctaggaatgaaaagaagtcagtgataaaatcaaaacg 16882382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 837 - 906
Target Start/End: Complemental strand, 32128774 - 32128705
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  32128774 cagggccgtccctaagaatttggaggctcggctctgggaatgaaaaaaggtcagtgataaaatcaaaacg 32128705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 837 - 1028
Target Start/End: Original strand, 37777140 - 37777325
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacgnnnnnnnnnnnnnnnnnnnaaaagcaatgt 936  Q
    |||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||                   ||||| |||||    
T  37777140 cagggctgtccctaaaaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtattttttaaaaa------aaaagtaatgt 37777233  T
Q  937 tctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaaccc 1028  Q
    |||||||||||||||       |||||||| ||||  ||||||||| |||||||| |||| ||||||||||||| ||||||||||||||||||    
T  37777234 tctatttatattttttaaaagataaatataaggtgccgtatatatg-cggtacacccaaaggtgaaaatgactaccgtatacatgaggaaccc 37777325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 55255447 - 55255379
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaac 905  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  55255447 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaac 55255379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 843 - 906
Target Start/End: Original strand, 38352189 - 38352252
Alignment:
Q  843 cgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  38352189 cgtccctaagaattcggaggctcggctctgggaatgaaaagagatcagtgataaaatcaaaacg 38352252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 836 - 906
Target Start/End: Complemental strand, 40089715 - 40089645
Alignment:
Q  836 acagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||| |||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||    
T  40089715 acagggtcgtccctaagaattcggaggctcggctcttggaatgaaaagaagtcagtgataaaatcaaaacg 40089645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 836 - 906
Target Start/End: Complemental strand, 54780969 - 54780899
Alignment:
Q  836 acagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||||||||||| |||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||    
T  54780969 acagggccgtccctgagaattcggaggcttggctctgggaatgaaaagaggccagtgataaaatcaaaacg 54780899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 2790659 - 2790727
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaac 905  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||    
T  2790659 cagggccgtctctaagaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaac 2790727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 848 - 1029
Target Start/End: Original strand, 43455460 - 43455634
Alignment:
Q  848 ctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacgnnnnnnnnnnnnnnnnnnnaaaagcaatgttctatttatat 947  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||                   || |||||||||||||||||||    
T  43455460 ctaagaattcggaggctcgactctgggaatgaaaagaggtcagtgataaaatcaaaacg-------tattatttttaaaagagcaatgttctatttatat 43455552  T
Q  948 ttttnnnnnnntaaatatagggtg-tgtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacccc 1029  Q
    ||||       |||||||| ||||  |||||||| ||||||||| |||| ||||||||||||| |||||||||||||||||||    
T  43455553 tttttaaaagataaatataaggtgccgtatatat-gcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccc 43455634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 841 - 906
Target Start/End: Complemental strand, 1105717 - 1105652
Alignment:
Q  841 gccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||| | ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  1105717 gccgtccttgagaattcagaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacg 1105652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 837 - 906
Target Start/End: Complemental strand, 24969786 - 24969717
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||  |||||||||| |||||||    
T  24969786 cagggccgtccctaagaattcggaggctcgactctgggaatgaaaagaggctagtgataaaaacaaaacg 24969717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 836 - 904
Target Start/End: Original strand, 10428115 - 10428183
Alignment:
Q  836 acagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaa 904  Q
    ||||||||||||   |||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  10428115 acagggccgtcctcgagaattcggaggctcggctctgggaatgaaaagaggtcagtgctaaaatcaaaa 10428183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 841 - 904
Target Start/End: Complemental strand, 47129172 - 47129109
Alignment:
Q  841 gccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaa 904  Q
    ||||||||| ||||||||||||||||||||||  |||||||||||| |||||||||||||||||    
T  47129172 gccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaa 47129109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 836 - 906
Target Start/End: Complemental strand, 16845211 - 16845142
Alignment:
Q  836 acagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||||||||||||||||||||||||||||||||||  |||||||| | | |||||||||||||||||||    
T  16845211 acagggccgtccctaagaattcggaggctcggctctggaaatgaaaa-aagccagtgataaaatcaaaacg 16845142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 837 - 906
Target Start/End: Complemental strand, 17679589 - 17679520
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||||||| || ||||||||||||||||| |||| ||||||||||||  |||||||||||||||||||    
T  17679589 cagggccgtctctgagaattcggaggctcggttctgggaatgaaaagagaccagtgataaaatcaaaacg 17679520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 837 - 906
Target Start/End: Complemental strand, 19498691 - 19498622
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||||||| ||||||||||||||||||||||||  ||||||||| ||| || ||||||||||||||||    
T  19498691 cagggccgtcactaagaattcggaggctcggctctaggaatgaaaacaggccaatgataaaatcaaaacg 19498622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 34768492 - 34768560
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaac 905  Q
    ||||| ||||||| ||||||||||||||||||| || |||||||||||||  |||||||||||||||||    
T  34768492 cagggtcgtccctgagaattcggaggctcggctttgggaatgaaaagaggctagtgataaaatcaaaac 34768560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 837 - 900
Target Start/End: Original strand, 5128758 - 5128821
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatc 900  Q
    ||||||||||||| ||||||  |||||||||||||| ||||||||||||| |||||||||||||    
T  5128758 cagggccgtccctgagaatttagaggctcggctctgggaatgaaaagaggccagtgataaaatc 5128821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 851 - 905
Target Start/End: Complemental strand, 35465281 - 35465227
Alignment:
Q  851 agaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaac 905  Q
    ||||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  35465281 agaattcggaggctcgattctgggaatgaaaagaggtcagtgataaaatcaaaac 35465227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 837 - 906
Target Start/End: Complemental strand, 10979092 - 10979023
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||||||| || |||||||||||| |  |||||| |||||||||||||| ||||||||||||||||||    
T  10979092 cagggccgtctctgagaattcggaggtttagctctgggaatgaaaagaggttagtgataaaatcaaaacg 10979023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 837 - 906
Target Start/End: Original strand, 16922245 - 16922314
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||||||||| |||||| ||||||||| || || ||||||||||||  |||||||||||||||||||    
T  16922245 cagggccgtccctgagaatttggaggctcgactttgggaatgaaaagagaccagtgataaaatcaaaacg 16922314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 929 - 1029
Target Start/End: Complemental strand, 10979004 - 10978904
Alignment:
Q  929 agcaatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacc 1027  Q
    |||||||||||||||||||||||       |||||| | ||||| ||||||||| |||||||| || | ||||||||||||| |||||||||||||||||    
T  10979004 agcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatg-cggtacacccagaagtgaaaatgactaccgtatacatgaggaacc 10978906  T
Q  1028 cc 1029  Q
    ||    
T  10978905 cc 10978904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 929 - 1029
Target Start/End: Complemental strand, 32128688 - 32128588
Alignment:
Q  929 agcaatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacc 1027  Q
    |||||||||||||||||||||||       |||||||| ||||| ||||||||| |||||||| |||| ||||||||||||| ||||||||| || ||||    
T  32128688 agcaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatg-cggtacacccaaaggtgaaaatgactaccgtatacataagaaacc 32128590  T
Q  1028 cc 1029  Q
    ||    
T  32128589 cc 32128588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 837 - 897
Target Start/End: Complemental strand, 48209436 - 48209376
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaa 897  Q
    ||||||||||||| |||||||||||||||||||||| || |||||||||  ||||||||||    
T  48209436 cagggccgtccctgagaattcggaggctcggctctgggagtgaaaagagaccagtgataaa 48209376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 929 - 1029
Target Start/End: Complemental strand, 54780881 - 54780781
Alignment:
Q  929 agcaatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacc 1027  Q
    |||||||||||||||||||||||       |||||| | ||||  ||||||||| |||||||| |||| ||||||||||||| |||||||||||||||||    
T  54780881 agcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatg-cggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 54780783  T
Q  1028 cc 1029  Q
    ||    
T  54780782 cc 54780781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 608 - 730
Target Start/End: Original strand, 15315250 - 15315372
Alignment:
Q  608 accaaagtataaaacaagagttgtggctaagggtttttctcgggtt-aagagatttgattacaatgagattttctcatcggtggtaaaacattgttttat 706  Q
    ||||| ||||||  ||||| |||| || ||||||||| ||| |||| ||| |||| || |||||||| || || ||| |||||||||||||||||| |||    
T  15315250 accaaggtataaggcaagacttgtagcaaagggttttactcaggttgaagggatt-gactacaatgaaatcttttcaccggtggtaaaacattgttctat 15315348  T
Q  707 aagggtacttatgaagattgttaa 730  Q
    |||||||||||||  |||||||||    
T  15315349 aagggtacttatggcgattgttaa 15315372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 853 - 904
Target Start/End: Original strand, 23508443 - 23508494
Alignment:
Q  853 aattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaa 904  Q
    ||||||||||||||||| || ||||||||||||| |||||||||||||||||    
T  23508443 aattcggaggctcggctttgggaatgaaaagaggccagtgataaaatcaaaa 23508494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 931 - 1029
Target Start/End: Original strand, 2790746 - 2790844
Alignment:
Q  931 caatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacccc 1029  Q
    |||||||||||||||||||||       |||||||| |||   ||||||||| |||||||| |||| ||||||||||||| |||||||||||||||||||    
T  2790746 caatgttctatttatattttttaaaagataaatataaggtaccgtatatatg-cggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccc 2790844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 661 - 730
Target Start/End: Original strand, 4568329 - 4568398
Alignment:
Q  661 ttgattacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatgaagattgttaa 730  Q
    ||||||||||||| || || ||| ||||| |||||||||||| ||||||||||||||||  |||||||||    
T  4568329 ttgattacaatgaaatcttttcaccggtgataaaacattgttctataagggtacttatggcgattgttaa 4568398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 661 - 730
Target Start/End: Original strand, 16637147 - 16637216
Alignment:
Q  661 ttgattacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatgaagattgttaa 730  Q
    ||||||||||||| || || ||| ||||||||||||||||||  |||||||||||||||  |||||||||    
T  16637147 ttgattacaatgaaatcttttcagcggtggtaaaacattgttcaataagggtacttatggcgattgttaa 16637216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 980 - 1029
Target Start/End: Complemental strand, 24969490 - 24969441
Alignment:
Q  980 tggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacccc 1029  Q
    ||||||||||| |||| ||||||||||||| |||||||||||||||||||    
T  24969490 tggcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccc 24969441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 851 - 904
Target Start/End: Original strand, 38209522 - 38209575
Alignment:
Q  851 agaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaa 904  Q
    |||||| |||||||||||||||  |||||||||||| |||||||||||||||||    
T  38209522 agaatttggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaa 38209575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 853 - 905
Target Start/End: Original strand, 2975358 - 2975410
Alignment:
Q  853 aattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaac 905  Q
    |||||| | |||||||||||| ||||||||||||||| |||||||||||||||    
T  2975358 aattcgaatgctcggctctgaaaatgaaaagaggtcaatgataaaatcaaaac 2975410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 929 - 1029
Target Start/End: Original strand, 34768577 - 34768677
Alignment:
Q  929 agcaatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacc 1027  Q
    |||||||||||||||||||||||       |||||||| ||||  ||||||||| |||||||| || | |||||||||| || |||||||||||||||||    
T  34768577 agcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatg-cggtacacccagaggtgaaaatgattaccgtatacatgaggaacc 34768675  T
Q  1028 cc 1029  Q
    ||    
T  34768676 cc 34768677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 929 - 1029
Target Start/End: Original strand, 38209594 - 38209694
Alignment:
Q  929 agcaatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacc 1027  Q
    |||||||||||||||||||||||       |||||| | ||||  ||||||||| |||||||| || | ||||||||||||| |||||||||||||||||    
T  38209594 agcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatg-cggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 38209692  T
Q  1028 cc 1029  Q
    ||    
T  38209693 cc 38209694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 837 - 892
Target Start/End: Complemental strand, 13460360 - 13460305
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtg 892  Q
    ||||||||||| | |||||||||||||||| ||||| |||| ||||||||||||||    
T  13460360 cagggccgtccttgagaattcggaggctcgactctgggaataaaaagaggtcagtg 13460305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 836 - 906
Target Start/End: Complemental strand, 37514849 - 37514781
Alignment:
Q  836 acagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||||||||||| |||||| |||||||| ||   | ||||||||||||| |||||||||||||||||||    
T  37514849 acagggccgtccctgagaatttggaggctcagcg--gggaatgaaaagaggccagtgataaaatcaaaacg 37514781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 986 - 1027
Target Start/End: Complemental strand, 24396981 - 24396940
Alignment:
Q  986 tacactcaaatgtgaaaatgactatcgtatacatgaggaacc 1027  Q
    |||||||||| |||||||| ||||||||||||||||||||||    
T  24396981 tacactcaaaggtgaaaatcactatcgtatacatgaggaacc 24396940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 980 - 1029
Target Start/End: Original strand, 38352309 - 38352358
Alignment:
Q  980 tggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacccc 1029  Q
    ||||||||||| |||| ||||||||||||| ||| |||||||||||||||    
T  38352309 tggcggtacacccaaaggtgaaaatgactaccgtgtacatgaggaacccc 38352358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 853 - 906
Target Start/End: Complemental strand, 51964884 - 51964831
Alignment:
Q  853 aattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||||| |||||||||| ||||||||||||| |  ||||||||||||||||    
T  51964884 aattcggagactcggctctgggaatgaaaagaggccgatgataaaatcaaaacg 51964831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 666 - 766
Target Start/End: Original strand, 3791089 - 3791189
Alignment:
Q  666 tacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatgaagattgttaatcagtacaatcttgaaatggaattaatgaatgtga 765  Q
    ||||||||||| |||||| ||||||| ||||||||||  |||||| ||||||||   ||||| ||||| | |||||||||  |||||  |||| ||||||    
T  3791089 tacaatgagatcttctcaccggtggtgaaacattgttccataaggatacttatggctattgtgaatcaattcaatcttgagttggaacaaatggatgtga 3791188  T
Q  766 a 766  Q
    |    
T  3791189 a 3791189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 837 - 897
Target Start/End: Original strand, 9578575 - 9578635
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaa 897  Q
    ||||||||||| | |||||||||||||||| ||||| || ||||||||||  |||||||||    
T  9578575 cagggccgtccttgagaattcggaggctcgactctgggagtgaaaagaggcaagtgataaa 9578635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 208
Target Start/End: Original strand, 15314749 - 15314821
Alignment:
Q  136 aggatcaggatttattataagcataaatattatttttgatgagaccaatatgtggatgaagtgcaaggaccta 208  Q
    |||||||  ||||||||||||||   || ||||||||||||||||| | ||| ||||||||||||| ||||||    
T  15314749 aggatcaaaatttattataagcagggatgttatttttgatgagacccacatggggatgaagtgcaaagaccta 15314821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 973 - 1029
Target Start/End: Complemental strand, 40089575 - 40089520
Alignment:
Q  973 gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacccc 1029  Q
    ||||||||| |||||||  |||| ||||||||||||| |||||||||||||||||||    
T  40089575 gtatatatg-cggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccc 40089520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 934 - 1029
Target Start/End: Complemental strand, 13460306 - 13460211
Alignment:
Q  934 tgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacccc 1029  Q
    ||||||||||||||||||       |||||| | ||||| ||||||||| ||||| || || ||||||||||||||| ||||||||| |||||||||    
T  13460306 tgttctatttatattttttaaaagataaatacaaggtgtcgtatatatg-cggtatacccagatgtgaaaatgactaccgtatacataaggaacccc 13460211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 926 - 1029
Target Start/End: Original strand, 54083242 - 54083345
Alignment:
Q  926 aaaagcaatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgagga 1024  Q
    |||| ||||| |||||||||||||||       |||||||| ||||  ||||||||| |||||||| ||||  | |||||||||| ||||||||||||||    
T  54083242 aaaaacaatgatctatttatattttttaaaagataaatataaggtgccgtatatatg-cggtacacccaaagataaaaatgactaccgtatacatgagga 54083340  T
Q  1025 acccc 1029  Q
    |||||    
T  54083341 acccc 54083345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 840 - 906
Target Start/End: Original strand, 35779248 - 35779314
Alignment:
Q  840 ggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||||| | |||||||||||| ||| |||   |||||||||||||  ||||||||||||||||||    
T  35779248 ggccgtccttgagaattcggaggttcgactcgaggaatgaaaagaggctagtgataaaatcaaaacg 35779314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 973 - 1027
Target Start/End: Original strand, 35779373 - 35779426
Alignment:
Q  973 gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacc 1027  Q
    ||||||||| |||||||| |||| |||||||||| || |||||||||||||||||    
T  35779373 gtatatatg-cggtacacccaaaggtgaaaatgattaccgtatacatgaggaacc 35779426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 833 - 871
Target Start/End: Original strand, 45560071 - 45560109
Alignment:
Q  833 tatacagggccgtccctaagaattcggaggctcggctct 871  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  45560071 tatacagggccgtccttaagtattcggaggctcggctct 45560109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 931 - 1025
Target Start/End: Complemental strand, 35465208 - 35465115
Alignment:
Q  931 caatgttctatttatatttttnnnnnnntaaatatagggtgtgtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaa 1025  Q
    ||||||| |||||||||||||       |||||| | |||| ||||||||| ||||||||  ||| |||||||| |||| |||||||||||||||    
T  35465208 caatgttatatttatattttttacaagataaataaaaggtgcgtatatatg-cggtacacctaaaagtgaaaataactaccgtatacatgaggaa 35465115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 3e-29; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 837 - 1029
Target Start/End: Complemental strand, 17169151 - 17168966
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacgnnnnnnnnnnnnnnnnnnnaaaagcaatgt 936  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||                   |||||||||||    
T  17169151 cagggccgtccctaagaattcggaggctcggctctggaaatgaaaagaggtcagtgataaaatcaaaacg-------tatttttttaaaaaaagcaatgt 17169059  T
Q  937 tctatttatatttttnnnnnnntaaatatagggtg-tgtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacccc 1029  Q
    |||||||||||||||       |||||||| |||| ||||||||| ||||||||| |||| ||||||||||||| | |||||||||||||||||    
T  17169058 tctatttatattttttaaaagataaatataaggtgttgtatatat-gcggtacacccaaaggtgaaaatgactaccatatacatgaggaacccc 17168966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 833 - 906
Target Start/End: Complemental strand, 19955916 - 19955843
Alignment:
Q  833 tatacagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19955916 tatacagggctgtccctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacg 19955843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 837 - 906
Target Start/End: Original strand, 40501707 - 40501776
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  40501707 cagggccgtccctaagaattcggaggctcgactctgagaatgaaaagaggtcagtgataaaatcaaaacg 40501776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 837 - 906
Target Start/End: Complemental strand, 6771989 - 6771920
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  6771989 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacg 6771920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 837 - 906
Target Start/End: Original strand, 51607358 - 51607427
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  51607358 caggaccgtccctaaaaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacg 51607427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 836 - 904
Target Start/End: Original strand, 21740851 - 21740919
Alignment:
Q  836 acagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaa 904  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21740851 acagggccgtccttgagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaa 21740919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 27906646 - 27906714
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaac 905  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  27906646 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaac 27906714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 837 - 906
Target Start/End: Complemental strand, 6889805 - 6889736
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||||||| | | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6889805 cagggccgtccttgaaaattcggaggctcggttctgagaatgaaaagaggtcagtgataaaatcaaaacg 6889736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 837 - 906
Target Start/End: Complemental strand, 6891651 - 6891582
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||||||| | | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6891651 cagggccgtccttgaaaattcggaggctcggttctgagaatgaaaagaggtcagtgataaaatcaaaacg 6891582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 837 - 906
Target Start/End: Complemental strand, 14146495 - 14146426
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||||||||| |||||||||||||||||||||  ||||||||||||| |||||||||||||||||||    
T  14146495 cagggccgtccctgagaattcggaggctcggctcttggaatgaaaagaggccagtgataaaatcaaaacg 14146426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 837 - 906
Target Start/End: Original strand, 22865378 - 22865447
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||||||||| ||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||    
T  22865378 cagggccgtccctgagaattcggaggcacggctctgggaatgaaaagaggtcaatgataaaatcaaaacg 22865447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 840 - 904
Target Start/End: Original strand, 13913401 - 13913465
Alignment:
Q  840 ggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaa 904  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||    
T  13913401 ggccgtccctaagaattcggaggcttggctctgagaatgaaaagatgccagtgataaaatcaaaa 13913465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 926 - 1029
Target Start/End: Complemental strand, 27559750 - 27559647
Alignment:
Q  926 aaaagcaatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgagga 1024  Q
    ||||||||||||||||||||||||||       |||||||| ||||| ||||||||| |||||||| |||| ||||||||||||| ||||||||||||||    
T  27559750 aaaagcaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatg-cggtacacccaaaggtgaaaatgactaccgtatacatgagga 27559652  T
Q  1025 acccc 1029  Q
    |||||    
T  27559651 acccc 27559647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 836 - 906
Target Start/End: Complemental strand, 5027747 - 5027677
Alignment:
Q  836 acagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||||||||||| |||||||||||||||| ||| | ||||||||||||| |||||||||||||||||||    
T  5027747 acagggccgtccctgagaattcggaggctcgactcggggaatgaaaagaggccagtgataaaatcaaaacg 5027677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 837 - 897
Target Start/End: Original strand, 9172940 - 9173000
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaa 897  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||    
T  9172940 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccggtgataaa 9173000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 837 - 897
Target Start/End: Original strand, 9180922 - 9180982
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaa 897  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||    
T  9180922 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccggtgataaa 9180982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 44655936 - 44655868
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaac 905  Q
    ||||||||||||| ||||||||||||||||||||||  |||||||||||  ||||||||||||||||||    
T  44655936 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagagaccagtgataaaatcaaaac 44655868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 843 - 906
Target Start/End: Complemental strand, 16140244 - 16140181
Alignment:
Q  843 cgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||| |||||||||||||||||||||| ||||||||||||| | |||||||||||||||||    
T  16140244 cgtccctgagaattcggaggctcggctctgggaatgaaaagaggccggtgataaaatcaaaacg 16140181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 834 - 906
Target Start/End: Complemental strand, 3406617 - 3406545
Alignment:
Q  834 atacagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||||| |||||| |||||| |||||||| |||| | |||||||||||||||||||||||||| ||||||    
T  3406617 atacagggctgtccctgagaatttggaggctcagctcggggaatgaaaagaggtcagtgataaaatgaaaacg 3406545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 834 - 906
Target Start/End: Original strand, 3440203 - 3440275
Alignment:
Q  834 atacagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||||| |||||| |||||| |||||||| |||| | |||||||||||||||||||||||||| ||||||    
T  3440203 atacagggctgtccctgagaatttggaggctcagctcggggaatgaaaagaggtcagtgataaaatgaaaacg 3440275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 854 - 906
Target Start/End: Original strand, 41697072 - 41697124
Alignment:
Q  854 attcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  41697072 attcggaagctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacg 41697124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 840 - 904
Target Start/End: Complemental strand, 50881621 - 50881557
Alignment:
Q  840 ggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaa 904  Q
    |||||||||| ||||||||||||||||||||||  |||||||||||| |||||||||||| ||||    
T  50881621 ggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaattaaaa 50881557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 608 - 730
Target Start/End: Complemental strand, 2396503 - 2396381
Alignment:
Q  608 accaaagtataaaacaagagttgtggctaagggtttttctcgggtt-aagagatttgattacaatgagattttctcatcggtggtaaaacattgttttat 706  Q
    ||||| ||||||  ||||| |||| || ||||||||| ||| |||  ||| ||||| |||||||||| || |||||| |||||||||||||||||| |||    
T  2396503 accaaggtataaggcaagacttgtagcaaagggttttactcaggtggaagggattt-attacaatgaaatcttctcaccggtggtaaaacattgttctat 2396405  T
Q  707 aagggtacttatgaagattgttaa 730  Q
    |||||||||||||  |||||||||    
T  2396404 aagggtacttatggcgattgttaa 2396381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 835 - 906
Target Start/End: Complemental strand, 5316877 - 5316806
Alignment:
Q  835 tacagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||||||||||| |||||| ||||||||| |  |  |||||||||||||||||||||||||||||||||    
T  5316877 tacagggccgtccctgagaatttggaggctcgaccttaggaatgaaaagaggtcagtgataaaatcaaaacg 5316806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 851 - 906
Target Start/End: Complemental strand, 34247208 - 34247153
Alignment:
Q  851 agaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||||||||||||||||||  |||||||| |||||||||||||||||||||||    
T  34247208 agaattcggaggctcggctctggaaatgaaaaaaggtcagtgataaaatcaaaacg 34247153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 661 - 730
Target Start/End: Original strand, 9524714 - 9524783
Alignment:
Q  661 ttgattacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatgaagattgttaa 730  Q
    ||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||||  |||||||||    
T  9524714 ttgattacaatgaaatcttttcaccggtggtaaaacattgttctataagggtacttatggcgattgttaa 9524783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 837 - 906
Target Start/End: Complemental strand, 23185622 - 23185553
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||||| ||| ||||||||||||||||||||   || |||||||||| |||||||||||||||||||    
T  23185622 cagggccgttcctgagaattcggaggctcggctcgaggattgaaaagaggccagtgataaaatcaaaacg 23185553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 926 - 1029
Target Start/End: Original strand, 9173023 - 9173126
Alignment:
Q  926 aaaagcaatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgagga 1024  Q
    |||| |||||||||||||||||||||       |||||||| ||||  ||||||||| |||||||  |||| ||||||||||||| ||||||||||||||    
T  9173023 aaaaacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatg-cggtacatccaaaggtgaaaatgactaccgtatacatgagga 9173121  T
Q  1025 acccc 1029  Q
    |||||    
T  9173122 acccc 9173126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 926 - 1029
Target Start/End: Original strand, 9181005 - 9181108
Alignment:
Q  926 aaaagcaatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgagga 1024  Q
    |||| |||||||||||||||||||||       |||||||| ||||  ||||||||| |||||||  |||| ||||||||||||| ||||||||||||||    
T  9181005 aaaaacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatg-cggtacatccaaaggtgaaaatgactaccgtatacatgagga 9181103  T
Q  1025 acccc 1029  Q
    |||||    
T  9181104 acccc 9181108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 837 - 897
Target Start/End: Original strand, 1366797 - 1366857
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaa 897  Q
    |||||||||| ||| ||||| |||||||| |||||| ||||||||||||| ||||||||||    
T  1366797 cagggccgtctctacgaatttggaggctcagctctgggaatgaaaagaggccagtgataaa 1366857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 929 - 1029
Target Start/End: Original strand, 1366881 - 1366981
Alignment:
Q  929 agcaatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacc 1027  Q
    |||||||||||||||||||||||       |||||||| ||||  ||||||||| |||||||| ||||  |||||||||||| |||||||| ||||||||    
T  1366881 agcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatg-cggtacacccaaagatgaaaatgactaccgtatacacgaggaacc 1366979  T
Q  1028 cc 1029  Q
    ||    
T  1366980 cc 1366981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 4971536 - 4971604
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaac 905  Q
    |||||| |||||| ||||||| ||||||||| || | ||||||||||||  ||||||||||||||||||    
T  4971536 cagggctgtccctgagaattctgaggctcggttcggggaatgaaaagagaccagtgataaaatcaaaac 4971604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 929 - 1029
Target Start/End: Complemental strand, 5316790 - 5316690
Alignment:
Q  929 agcaatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacc 1027  Q
    |||||||||||||||||||||||       |||||| | ||||  ||||||||| |||||||| || | ||||||||||||| |||||||||||||||||    
T  5316790 agcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatg-cggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 5316692  T
Q  1028 cc 1029  Q
    ||    
T  5316691 cc 5316690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 929 - 1029
Target Start/End: Complemental strand, 23185537 - 23185437
Alignment:
Q  929 agcaatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacc 1027  Q
    |||||||||||||||||||||||       |||||| | ||||  ||||||||| |||||||| || | ||||||||||||| |||||||||||||||||    
T  23185537 agcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatg-cggtacacccataggtgaaaatgactaccgtatacatgaggaacc 23185439  T
Q  1028 cc 1029  Q
    ||    
T  23185438 cc 23185437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 929 - 1029
Target Start/End: Complemental strand, 44655851 - 44655751
Alignment:
Q  929 agcaatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacc 1027  Q
    |||||||||||||||||||||||       |||||| | ||||| ||||||||| |||||||| || | || |||||||||| |||||||||||||||||    
T  44655851 agcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatg-cggtacacccagaggtaaaaatgactaccgtatacatgaggaacc 44655753  T
Q  1028 cc 1029  Q
    ||    
T  44655752 cc 44655751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 926 - 1029
Target Start/End: Complemental strand, 19955830 - 19955727
Alignment:
Q  926 aaaagcaatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgagga 1024  Q
    |||||||||| |||||||||||||||       |||||||| |||   ||||||||| |||||||| |||| ||||||||||||| |||||| |||||||    
T  19955830 aaaagcaatgatctatttatattttttaaaagataaatataaggtaccgtatatatg-cggtacacccaaaggtgaaaatgactaccgtatatatgagga 19955732  T
Q  1025 acccc 1029  Q
    |||||    
T  19955731 acccc 19955727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 926 - 1027
Target Start/End: Original strand, 40501790 - 40501891
Alignment:
Q  926 aaaagcaatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgagga 1024  Q
    ||||| |||| |||||||||||||||       |||||||| ||||| ||||||||| |||||||| |||| || |||||||||| ||||||||||| ||    
T  40501790 aaaagtaatgatctatttatattttttaaaagataaatataaggtgtcgtatatatg-cggtacacccaaaggtaaaaatgactaccgtatacatgaaga 40501888  T
Q  1025 acc 1027  Q
    |||    
T  40501889 acc 40501891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 848 - 905
Target Start/End: Complemental strand, 44895832 - 44895775
Alignment:
Q  848 ctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaac 905  Q
    |||| |||||||||| |||| |||| ||||||||||||||| |||| |||||||||||    
T  44895832 ctaaaaattcggaggttcggttctgggaatgaaaagaggtcggtgaaaaaatcaaaac 44895775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 973 - 1026
Target Start/End: Original strand, 51607488 - 51607540
Alignment:
Q  973 gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaac 1026  Q
    ||||||||| |||||||| |||| ||||||||||||| ||||||||||||||||    
T  51607488 gtatatatg-cggtacacccaaacgtgaaaatgactaccgtatacatgaggaac 51607540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 973 - 1029
Target Start/End: Original strand, 4971666 - 4971721
Alignment:
Q  973 gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacccc 1029  Q
    ||||||||| |||||||| || | ||||||||||||| |||||||||||||||||||    
T  4971666 gtatatatg-cggtacacccataagtgaaaatgactaccgtatacatgaggaacccc 4971721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 666 - 766
Target Start/End: Original strand, 47701993 - 47702093
Alignment:
Q  666 tacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatgaagattgttaatcagtacaatcttgaaatggaattaatgaatgtga 765  Q
    ||||||||||| |||||| ||||||| ||||||||||  |||||| ||||||||   ||||| ||||| | |||||||||  |||||  |||| ||||||    
T  47701993 tacaatgagatcttctcaccggtggtgaaacattgttccataaggatacttatggctattgtgaatcaattcaatcttgagttggaacaaatggatgtga 47702092  T
Q  766 a 766  Q
    |    
T  47702093 a 47702093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 984 - 1027
Target Start/End: Original strand, 38547094 - 38547137
Alignment:
Q  984 ggtacactcaaatgtgaaaatgactatcgtatacatgaggaacc 1027  Q
    ||||||| ||||||||||||| |||||| |||||||||||||||    
T  38547094 ggtacacccaaatgtgaaaatcactatcatatacatgaggaacc 38547137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 985 - 1027
Target Start/End: Original strand, 43235829 - 43235871
Alignment:
Q  985 gtacactcaaatgtgaaaatgactatcgtatacatgaggaacc 1027  Q
    |||||| |||| |||||||| ||||||||||||||||||||||    
T  43235829 gtacacccaaaggtgaaaatcactatcgtatacatgaggaacc 43235871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 984 - 1029
Target Start/End: Complemental strand, 44895707 - 44895662
Alignment:
Q  984 ggtacactcaaatgtgaaaatgactatcgtatacatgaggaacccc 1029  Q
    ||||||| |||| |||||||||| || |||||||||||||||||||    
T  44895707 ggtacacccaaaggtgaaaatgattaccgtatacatgaggaacccc 44895662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 1e-28; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 837 - 906
Target Start/End: Complemental strand, 42600967 - 42600898
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  42600967 cagggccgtccctaagaattcggaggctcggctctgaaaatgaaaagaggtcagtgataaaatcaaaacg 42600898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 836 - 906
Target Start/End: Complemental strand, 10917576 - 10917506
Alignment:
Q  836 acagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  10917576 acagggctgtccttaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacg 10917506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 837 - 1029
Target Start/End: Original strand, 23798179 - 23798365
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacgnnnnnnnnnnnnnnnnnnnaaaagcaatgt 936  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||                   || ||||||||    
T  23798179 cagggccgtccctaagaattcggaggctcggctctgggaacgaaaagaggtcaatgataaaatcaaaacg------tatattttttttaaagagcaatgt 23798272  T
Q  937 tctatttatatttttnnnnnnntaaatatagggtg-tgtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacccc 1029  Q
    |||||||||||||||       |||||||| ||||  |||||||| ||||||||| |||| ||||||||||||| |||||||||||||||||||    
T  23798273 tctatttatattttttaaaagataaatataaggtgccgtatatat-gcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacccc 23798365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 837 - 906
Target Start/End: Original strand, 23606548 - 23606617
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||    
T  23606548 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacg 23606617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 837 - 906
Target Start/End: Original strand, 37430076 - 37430145
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  37430076 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacg 37430145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 2952137 - 2952205
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaac 905  Q
    ||||||||||||| ||||||||||||||||||||||  |||||||||||| ||||||||||||||||||    
T  2952137 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaac 2952205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 840 - 906
Target Start/End: Original strand, 13534609 - 13534675
Alignment:
Q  840 ggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||||||| | |||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  13534609 ggccgtccctgaaaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacg 13534675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 840 - 906
Target Start/End: Original strand, 13624149 - 13624215
Alignment:
Q  840 ggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||||||| | |||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  13624149 ggccgtccctgaaaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacg 13624215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 837 - 906
Target Start/End: Original strand, 20003728 - 20003797
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||||||||| |||||| ||||||||||||| | ||||||||||||| |||||||||||||||||||    
T  20003728 cagggccgtccctgagaatttggaggctcggctcggggaatgaaaagaggccagtgataaaatcaaaacg 20003797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 837 - 906
Target Start/End: Complemental strand, 41879364 - 41879295
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||||||||| |||||||| ||||||||||||| |||||||||||||| ||||||||||| ||||||    
T  41879364 cagggccgtccctgagaattcgaaggctcggctctgggaatgaaaagaggttagtgataaaattaaaacg 41879295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 837 - 906
Target Start/End: Complemental strand, 45476001 - 45475932
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||| ||||| |||||||||||||||||||| | ||||||||||||| |||||||||||||||||||    
T  45476001 cagggccatccctgagaattcggaggctcggctcggggaatgaaaagaggccagtgataaaatcaaaacg 45475932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 3048435 - 3048503
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaac 905  Q
    |||||||||| || ||||||||||||||||||||||  |||||||||||| ||||||||||||||||||    
T  3048435 cagggccgtctctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaac 3048503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 661 - 730
Target Start/End: Original strand, 21040416 - 21040485
Alignment:
Q  661 ttgattacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatgaagattgttaa 730  Q
    ||||||||||||| || || ||| |||||||||||||||||| |||||||||||||||| ||||||||||    
T  21040416 ttgattacaatgaaatcttttcaccggtggtaaaacattgttctataagggtacttatggagattgttaa 21040485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 840 - 905
Target Start/End: Complemental strand, 30883512 - 30883447
Alignment:
Q  840 ggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaac 905  Q
    |||||||||| ||||||| ||||||||||||||  |||||||||||| ||||||||||||||||||    
T  30883512 ggccgtccctgagaattcagaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaac 30883447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 661 - 730
Target Start/End: Complemental strand, 4814421 - 4814352
Alignment:
Q  661 ttgattacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatgaagattgttaa 730  Q
    ||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||||  |||||||||    
T  4814421 ttgattacaatgaaatcttttcaccggtggtaaaacattgttctataagggtacttatggcgattgttaa 4814352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 661 - 730
Target Start/End: Original strand, 28893750 - 28893819
Alignment:
Q  661 ttgattacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatgaagattgttaa 730  Q
    ||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||||  |||||||||    
T  28893750 ttgattacaatgaaatcttttcaccggtggtaaaacattgttctataagggtacttatggcgattgttaa 28893819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 929 - 1029
Target Start/End: Original strand, 23606633 - 23606733
Alignment:
Q  929 agcaatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacc 1027  Q
    |||||||||||||||||||||||       |||||||| ||||  ||||||||| |||||||| |||| || |||||||||| |||||||||||||||||    
T  23606633 agcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatg-cggtacacccaaaggtaaaaatgactaccgtatacatgaggaacc 23606731  T
Q  1028 cc 1029  Q
    ||    
T  23606732 cc 23606733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 926 - 1029
Target Start/End: Complemental strand, 42600884 - 42600781
Alignment:
Q  926 aaaagcaatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgagga 1024  Q
    |||||||||| |||||||||||||||       |||||||| ||||  |||||||||  ||||||| |||| ||||||||||||| ||||||||||||||    
T  42600884 aaaagcaatgatctatttatattttttaaaagataaatataaggtgccgtatatatgt-ggtacacccaaaggtgaaaatgactaccgtatacatgagga 42600786  T
Q  1025 acccc 1029  Q
    |||||    
T  42600785 acccc 42600781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 851 - 905
Target Start/End: Original strand, 5860674 - 5860728
Alignment:
Q  851 agaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaac 905  Q
    |||||| |||||||||||||||  ||||||||||||||| |||||||||||||||    
T  5860674 agaatttggaggctcggctctggaaatgaaaagaggtcaatgataaaatcaaaac 5860728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 661 - 730
Target Start/End: Complemental strand, 16754455 - 16754386
Alignment:
Q  661 ttgattacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatgaagattgttaa 730  Q
    ||||||||||||| || || ||| |||| ||||||||||||| ||||||||||||||||  |||||||||    
T  16754455 ttgattacaatgaaatcttttcaccggtagtaaaacattgttctataagggtacttatggcgattgttaa 16754386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 661 - 730
Target Start/End: Original strand, 28330881 - 28330950
Alignment:
Q  661 ttgattacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatgaagattgttaa 730  Q
    ||||||||||||| || || ||| |||| ||||||||||||| ||||||||||||||||  |||||||||    
T  28330881 ttgattacaatgaaatcttttcaccggtagtaaaacattgttctataagggtacttatggcgattgttaa 28330950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 931 - 1027
Target Start/End: Original strand, 15167421 - 15167517
Alignment:
Q  931 caatgttctatttatatttttnnnnnnntaaatatagggtg-tgtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacc 1027  Q
    |||||||||||||| ||||||       ||||||||  ||| ||||||||| ||| ||||| ||||||||||||| ||||||||||||||||||||||    
T  15167421 caatgttctatttaaattttttaaaagataaatataaagtgttgtatatat-gcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 15167517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 929 - 1029
Target Start/End: Complemental strand, 45475916 - 45475816
Alignment:
Q  929 agcaatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacc 1027  Q
    |||||||||||||||||||||||       |||||| | ||||  ||||||||| |||||||| || | ||||||||||||| |||||||||||||||||    
T  45475916 agcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatg-cggtacacccataggtgaaaatgactaccgtatacatgaggaacc 45475818  T
Q  1028 cc 1029  Q
    ||    
T  45475817 cc 45475816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 926 - 1029
Target Start/End: Complemental strand, 10917493 - 10917390
Alignment:
Q  926 aaaagcaatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgagga 1024  Q
    |||| ||||| |||||||||||||||       |||||||| ||||  ||||||||| |||||||| |||| ||||||||||||| | ||||||||||||    
T  10917493 aaaaacaatgatctatttatattttttaaaagataaatataaggtgccgtatatatg-cggtacacccaaaggtgaaaatgactaccttatacatgagga 10917395  T
Q  1025 acccc 1029  Q
    |||||    
T  10917394 acccc 10917390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 986 - 1027
Target Start/End: Complemental strand, 15078800 - 15078759
Alignment:
Q  986 tacactcaaatgtgaaaatgactatcgtatacatgaggaacc 1027  Q
    ||||| ||||||||||||| ||||||||||||||||||||||    
T  15078800 tacacccaaatgtgaaaatcactatcgtatacatgaggaacc 15078759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 661 - 730
Target Start/End: Original strand, 25682893 - 25682962
Alignment:
Q  661 ttgattacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatgaagattgttaa 730  Q
    ||||||||||||| || || ||| |||||||||| ||||||| ||||| ||||||||||  |||||||||    
T  25682893 ttgattacaatgaaatcttttcaccggtggtaaagcattgttctataaaggtacttatggcgattgttaa 25682962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 973 - 1029
Target Start/End: Original strand, 13534735 - 13534790
Alignment:
Q  973 gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacccc 1029  Q
    ||||||||| |||||||| || | ||||||||||||| |||||||||||||||||||    
T  13534735 gtatatatg-cggtacacccagaggtgaaaatgactaccgtatacatgaggaacccc 13534790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 973 - 1029
Target Start/End: Original strand, 13624275 - 13624330
Alignment:
Q  973 gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacccc 1029  Q
    ||||||||| |||||||| || | ||||||||||||| |||||||||||||||||||    
T  13624275 gtatatatg-cggtacacccagaggtgaaaatgactaccgtatacatgaggaacccc 13624330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 666 - 766
Target Start/End: Original strand, 26401306 - 26401406
Alignment:
Q  666 tacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatgaagattgttaatcagtacaatcttgaaatggaattaatgaatgtga 765  Q
    ||||||||||| |||||| ||||||| ||||||||||  |||||| ||||||||   ||||| ||||| | |||||||||  |||||  |||| ||||||    
T  26401306 tacaatgagatattctcaccggtggtgaaacattgttccataaggatacttatggctattgtgaatcaattcaatcttgagttggaacaaatggatgtga 26401405  T
Q  766 a 766  Q
    |    
T  26401406 a 26401406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 973 - 1029
Target Start/End: Complemental strand, 30883383 - 30883328
Alignment:
Q  973 gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacccc 1029  Q
    ||||||||| |||||||| || | ||||||||||||| |||||||||||||||||||    
T  30883383 gtatatatg-cggtacacccagaggtgaaaatgactaccgtatacatgaggaacccc 30883328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 673 - 719
Target Start/End: Original strand, 40827259 - 40827305
Alignment:
Q  673 agattttctcatcggtggtaaaacattgttttataagggtacttatg 719  Q
    ||||||||||| | ||| ||||||||||||| |||||||||||||||    
T  40827259 agattttctcaccagtgttaaaacattgtttaataagggtacttatg 40827305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 982 - 1027
Target Start/End: Complemental strand, 5942742 - 5942697
Alignment:
Q  982 gcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacc 1027  Q
    ||||||||| |||| |||||||| |||| |||||||||||||||||    
T  5942742 gcggtacacccaaaggtgaaaatcactaccgtatacatgaggaacc 5942697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 837 - 882
Target Start/End: Original strand, 33963268 - 33963313
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaa 882  Q
    ||||||||| | | ||||||||||||||||||| ||||||||||||    
T  33963268 cagggccgttcatgagaattcggaggctcggctttgagaatgaaaa 33963313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 1e-28; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 837 - 906
Target Start/End: Original strand, 27506659 - 27506728
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  27506659 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacg 27506728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 837 - 1029
Target Start/End: Complemental strand, 24410623 - 24410435
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacgnnnnnnnnnnnnnnnnnnnaaaagcaatgt 936  Q
    ||||||||||||||||||||||||||||||| | || ||||||||||||| |||||||||||||||||||                   |||| ||||||    
T  24410623 cagggccgtccctaagaattcggaggctcggttttgggaatgaaaagaggccagtgataaaatcaaaacg----tattttttttttttaaaaaacaatgt 24410528  T
Q  937 tctatttatatttttnnnnnnntaaatatagggtg-tgtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacccc 1029  Q
    |||||||||||||||       |||||||| ||||  |||||||| ||||||||| |||| ||||||||||||| |||||||||||||||||||    
T  24410527 tctatttatattttttaaaagataaatataaggtgccgtatatat-gcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccc 24410435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 836 - 906
Target Start/End: Complemental strand, 26716314 - 26716244
Alignment:
Q  836 acagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||||||||||||||||||||  ||||||||| || |||||||||||||||||||||||||||||||||    
T  26716314 acagggccgtccctaagaattcgttggctcggctttgggaatgaaaagaggtcagtgataaaatcaaaacg 26716244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 837 - 905
Target Start/End: Complemental strand, 4506078 - 4506010
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaac 905  Q
    ||||||||||||| ||||||||||||||||||||||  |||||||||||| ||||||||||||||||||    
T  4506078 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaac 4506010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 8906996 - 8907064
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaac 905  Q
    ||||||||| ||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  8906996 cagggccgttcctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaac 8907064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 833 - 904
Target Start/End: Original strand, 12337361 - 12337432
Alignment:
Q  833 tatacagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaa 904  Q
    ||||||||||||||||| |||||||| |||||||||||||  |||||||||||| |||||||||||||||||    
T  12337361 tatacagggccgtccctgagaattcgaaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaa 12337432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 836 - 905
Target Start/End: Complemental strand, 3155402 - 3155333
Alignment:
Q  836 acagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaac 905  Q
    |||||||||||||| ||||||||||||||||||| | | ||||||||||||||||||||||||| |||||    
T  3155402 acagggccgtccctgagaattcggaggctcggctttaaaaatgaaaagaggtcagtgataaaattaaaac 3155333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 837 - 906
Target Start/End: Original strand, 29939781 - 29939850
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||| |||||||| |||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||    
T  29939781 caggaccgtccctgagaattcgaaggctcggctctgggaataaaaagaggtcagtgataaaatcaaaacg 29939850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 840 - 904
Target Start/End: Complemental strand, 6965186 - 6965122
Alignment:
Q  840 ggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaa 904  Q
    |||||||||| ||||||||||||||||||||||  |||||||||||| |||||||||||||||||    
T  6965186 ggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaa 6965122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 841 - 905
Target Start/End: Complemental strand, 40636317 - 40636253
Alignment:
Q  841 gccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaac 905  Q
    ||||||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||    
T  40636317 gccgtccctgagaattcggaggctcagctctgggaatgaaaagaggccagtgataaaatcaaaac 40636253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 840 - 906
Target Start/End: Original strand, 10762488 - 10762554
Alignment:
Q  840 ggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||||||||||||| |||||||| |||||| ||||||||||||| |||||||||||| ||||||    
T  10762488 ggccgtccctaagaatttggaggctcagctctgggaatgaaaagaggccagtgataaaattaaaacg 10762554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 837 - 904
Target Start/End: Complemental strand, 3953188 - 3953121
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaa 904  Q
    ||||| ||||||| |||||| |||||||||||| ||  ||||||||||||||||||||||||||||||    
T  3953188 cagggtcgtccctgagaatttggaggctcggctttggaaatgaaaagaggtcagtgataaaatcaaaa 3953121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 929 - 1027
Target Start/End: Original strand, 29939866 - 29939964
Alignment:
Q  929 agcaatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacc 1027  Q
    |||||||||||||||||||||||       |||||| | ||||| ||||||||| |||||||| |||| ||||||||||||| |||||||||||||||||    
T  29939866 agcaatgttctatttatattttttacaagataaatacaaggtgtcgtatatatg-cggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 29939964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 837 - 906
Target Start/End: Complemental strand, 8327801 - 8327732
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||| |||||||||| ||||||||||||| | ||||  ||||||||||| ||||||||||||||||||||    
T  8327801 caggaccgtccctaaaaattcggaggctcagttctggaaatgaaaagagatcagtgataaaatcaaaacg 8327732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 837 - 906
Target Start/End: Complemental strand, 9046213 - 9046144
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||||||||| |||||||||  ||||| |||||| |||| |||||||| |||||||||||||||||||    
T  9046213 cagggccgtcccaaagaattcgttggctcagctctgggaattaaaagaggccagtgataaaatcaaaacg 9046144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 1396617 - 1396685
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaac 905  Q
    ||||||| ||| | |||||||||||||||| |||||  |||||||||||| ||||||||||||||||||    
T  1396617 cagggccttccttgagaattcggaggctcgactctggaaatgaaaagaggccagtgataaaatcaaaac 1396685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 929 - 1029
Target Start/End: Original strand, 10762569 - 10762669
Alignment:
Q  929 agcaatgttctatttatatttttnnnnnnntaaatatagggtgtg-tatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacc 1027  Q
    |||||||||||||||||||||||       |||||||| |||| | ||||||||  ||||||| |||| ||||||||||||| |||||||||||||||||    
T  10762569 agcaatgttctatttatattttttaaaagataaatataaggtgcggtatatatgt-ggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 10762667  T
Q  1028 cc 1029  Q
    ||    
T  10762668 cc 10762669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 608 - 730
Target Start/End: Original strand, 2739138 - 2739260
Alignment:
Q  608 accaaagtataaaacaagagttgtggctaagggtttttctcgggtt-aagagatttgattacaatgagattttctcatcggtggtaaaacattgttttat 706  Q
    ||||| ||||||  ||||| |||| |||||||||||| ||| |||  ||| |||| ||||||||||| || || ||| || ||||||||||||||| |||    
T  2739138 accaaggtataaggcaagacttgtagctaagggttttactcaggtggaagggatt-gattacaatgaaatcttttcaccgctggtaaaacattgttctat 2739236  T
Q  707 aagggtacttatgaagattgttaa 730  Q
    |||||||||||||  |||||||||    
T  2739237 aagggtacttatggcgattgttaa 2739260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 843 - 906
Target Start/End: Original strand, 5952642 - 5952705
Alignment:
Q  843 cgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||| |||||||||||| ||||||||  ||||||||||||| || ||||||||||||||||    
T  5952642 cgtccctgagaattcggaggttcggctctcggaatgaaaagaggccaatgataaaatcaaaacg 5952705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 840 - 906
Target Start/End: Complemental strand, 34694155 - 34694089
Alignment:
Q  840 ggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||||||| |||||||||||| |||| ||||  |||||||||||| | |||||||||||||||||    
T  34694155 ggccgtccctgagaattcggaggttcggatctggaaatgaaaagaggcccgtgataaaatcaaaacg 34694089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 840 - 906
Target Start/End: Complemental strand, 34716567 - 34716501
Alignment:
Q  840 ggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||||||| |||||||||||| |||| ||||  |||||||||||| | |||||||||||||||||    
T  34716567 ggccgtccctgagaattcggaggttcggatctggaaatgaaaagaggcccgtgataaaatcaaaacg 34716501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 661 - 730
Target Start/End: Original strand, 17935070 - 17935139
Alignment:
Q  661 ttgattacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatgaagattgttaa 730  Q
    |||| |||||||| || || ||| |||||||||||||||||| ||||||||||||||||  |||||||||    
T  17935070 ttgactacaatgaaatcttttcaccggtggtaaaacattgttctataagggtacttatggcgattgttaa 17935139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 661 - 730
Target Start/End: Complemental strand, 20051956 - 20051887
Alignment:
Q  661 ttgattacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatgaagattgttaa 730  Q
    ||||||| ||||| || || ||| |||||||||||||||||| ||||||||||||||||  |||||||||    
T  20051956 ttgattataatgaaatcttttcaccggtggtaaaacattgttctataagggtacttatggcgattgttaa 20051887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 661 - 730
Target Start/End: Complemental strand, 22714429 - 22714360
Alignment:
Q  661 ttgattacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatgaagattgttaa 730  Q
    ||||||||||||| || || ||| |||| ||||||||||||| ||||||||||||||||  |||||||||    
T  22714429 ttgattacaatgaaatcttttcaccggtagtaaaacattgttctataagggtacttatggcgattgttaa 22714360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 661 - 730
Target Start/End: Original strand, 39685233 - 39685302
Alignment:
Q  661 ttgattacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatgaagattgttaa 730  Q
    ||||||||||||| || || ||| |||| ||||||||||||| ||||||||||||||||  |||||||||    
T  39685233 ttgattacaatgaaatcttttcaccggtagtaaaacattgttctataagggtacttatggcgattgttaa 39685302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 973 - 1029
Target Start/End: Complemental strand, 9046082 - 9046027
Alignment:
Q  973 gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacccc 1029  Q
    ||||||||| |||||||| |||| ||||||||||||| |||||||||||||||||||    
T  9046082 gtatatatg-cggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccc 9046027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 837 - 904
Target Start/End: Complemental strand, 7162967 - 7162900
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaa 904  Q
    ||||||||||||| ||| |||| |||||| |||| | ||||||||||||| |||||||||||| ||||    
T  7162967 cagggccgtccctgagatttcgaaggctcagctcggggaatgaaaagaggccagtgataaaattaaaa 7162900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 974 - 1029
Target Start/End: Complemental strand, 26716180 - 26716126
Alignment:
Q  974 tatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacccc 1029  Q
    |||||||| |||||||| |||| ||||||||||||| |||||||||||||||||||    
T  26716180 tatatatg-cggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccc 26716126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 666 - 743
Target Start/End: Complemental strand, 31058089 - 31058012
Alignment:
Q  666 tacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatgaagattgttaatcagtacaatctt 743  Q
    |||||| |||| |||||||||||||| ||||||||||  |||||| |||||||||  ||||| ||||| | |||||||    
T  31058089 tacaatcagatcttctcatcggtggtgaaacattgttccataaggatacttatgaccattgtgaatcaattcaatctt 31058012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 973 - 1029
Target Start/End: Complemental strand, 6965060 - 6965005
Alignment:
Q  973 gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacccc 1029  Q
    ||||||||| |||||||| || | ||||||||||||| |||||||||||||||||||    
T  6965060 gtatatatg-cggtacacccagaggtgaaaatgactaccgtatacatgaggaacccc 6965005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 929 - 1029
Target Start/End: Original strand, 12337452 - 12337552
Alignment:
Q  929 agcaatgttctatttatatttttnnnnnnntaaatatagggtgtg-tatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacc 1027  Q
    |||||||||||||||||||||||       |||||| | |||||  ||||||||  ||||||| || | ||||||||||||| |||||||||||||||||    
T  12337452 agcaatgttctatttatattttttaaaagataaatacaaggtgtcatatatatgt-ggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 12337550  T
Q  1028 cc 1029  Q
    ||    
T  12337551 cc 12337552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 666 - 766
Target Start/End: Original strand, 39486167 - 39486267
Alignment:
Q  666 tacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatgaagattgttaatcagtacaatcttgaaatggaattaatgaatgtga 765  Q
    ||||||||||| |||||| ||||||| ||||||||||  |||||| ||||||||   ||||| ||||| | |||||||||  |||||  |||| ||||||    
T  39486167 tacaatgagatcttctcaccggtggtgaaacattgttccataaggatacttatggctattgtgaatcaattcaatcttgagttggaagaaatggatgtga 39486266  T
Q  766 a 766  Q
    |    
T  39486267 a 39486267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 666 - 745
Target Start/End: Complemental strand, 39484888 - 39484809
Alignment:
Q  666 tacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatgaagattgttaatcagtacaatcttga 745  Q
    ||||||||||| |||||| ||||||| ||||||||||  |||||| ||||||||   ||||| ||||| | |||||||||    
T  39484888 tacaatgagatattctcaccggtggtgaaacattgttccataaggatacttatggctattgtgaatcaattcaatcttga 39484809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 837 - 871
Target Start/End: Complemental strand, 3400174 - 3400140
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctct 871  Q
    |||||||||||||||| ||||||||||||||||||    
T  3400174 cagggccgtccctaagtattcggaggctcggctct 3400140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 8e-27; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 837 - 1029
Target Start/End: Original strand, 16198709 - 16198895
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacgnnnnnnnnnnnnnnnnnnnaaaagcaatgt 936  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||                   |||||||||||    
T  16198709 cagggccttccctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacg------tattttttttttaaaaagcaatgt 16198802  T
Q  937 tctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacccc 1029  Q
    |||||||||||||||       |||||||| ||||| |||||||| ||| ||||| |||| ||||||||||||| |||||||||||||||||||    
T  16198803 tctatttatattttttaaaagataaatataaggtgtcgtatatat-gcgatacacccaaaggtgaaaatgactaccgtatacatgaggaacccc 16198895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 837 - 1029
Target Start/End: Original strand, 38869279 - 38869464
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacgnnnnnnnnnnnnnnnnnnnaaaagcaatgt 936  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||                   || ||||||||    
T  38869279 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggtcagttataaaatcaaaacg-------tattttttttaaaagagcaatgt 38869371  T
Q  937 tctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacccc 1029  Q
    |||||||||||||||       |||||||| ||||| |||||||| ||||||||| |||| ||||||||||||| |||||||||||| ||||||    
T  38869372 tctatttatattttttaaaagataaatataaggtgtcgtatatat-gcggtacacccaaaggtgaaaatgactaccgtatacatgagaaacccc 38869464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 837 - 906
Target Start/End: Original strand, 16799240 - 16799309
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  16799240 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagatgtcagtgataaaatcaaaacg 16799309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 837 - 906
Target Start/End: Complemental strand, 27079197 - 27079128
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  27079197 cagggccgtccctgagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacg 27079128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 837 - 906
Target Start/End: Original strand, 36187795 - 36187864
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  36187795 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacg 36187864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 836 - 906
Target Start/End: Complemental strand, 7671119 - 7671049
Alignment:
Q  836 acagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  7671119 acagggccgtccttaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacg 7671049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 15480006 - 15480074
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaac 905  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  15480006 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaac 15480074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 837 - 1029
Target Start/End: Complemental strand, 9364476 - 9364290
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacgnnnnnnnnnnnnnnnnnnnaaaagcaatgt 936  Q
    |||||||  |||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||                   |||||||||||    
T  9364476 cagggccacccctaagaattcggaggctcagctctgggaatgaaaagaggccagtgataaaatcaaaacg------tatttttttttttaaaagcaatgt 9364383  T
Q  937 tctatttatatttttnnnnnnntaaatatagggtg-tgtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacccc 1029  Q
    |||||||||||||||       |||||||| ||||  |||||||| ||||||||| |||| ||||||||||||| |||||||||||||||||||    
T  9364382 tctatttatattttttaaaagataaatataaggtgccgtatatat-gcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccc 9364290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 837 - 906
Target Start/End: Original strand, 22986473 - 22986542
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||||||| | ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  22986473 cagggccgtccgtgagaattcggaggctcagctctgagaatgaaaagaggccagtgataaaatcaaaacg 22986542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 838 - 906
Target Start/End: Original strand, 28822253 - 28822321
Alignment:
Q  838 agggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||||||||||||||||||||| |||||| || |||||||||||||| ||||||||||||||||||    
T  28822253 agggccgtccctaagaattcggaggttcggctttgggaatgaaaagaggttagtgataaaatcaaaacg 28822321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 841 - 906
Target Start/End: Complemental strand, 19523380 - 19523315
Alignment:
Q  841 gccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||  |||||||||||||||||||    
T  19523380 gccgtccctgagaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacg 19523315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 837 - 906
Target Start/End: Complemental strand, 27924267 - 27924198
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||||||  |||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||    
T  27924267 cagggccgtttctaagaattcgggggctcgactctgagaatgaaaagaggccagtgataaaatcaaaacg 27924198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 837 - 906
Target Start/End: Original strand, 31194528 - 31194597
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||||||||| | |||||||||||||||||||| ||||||||||||  |||||||||||||||||||    
T  31194528 cagggccgtccctgaaaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacg 31194597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 845 - 902
Target Start/End: Original strand, 40389461 - 40389518
Alignment:
Q  845 tccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaa 902  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  40389461 tccctaagaattcggaggctcggctctgggaatgaaaagatgtcagtgataaaatcaa 40389518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 842 - 906
Target Start/End: Complemental strand, 2275070 - 2275006
Alignment:
Q  842 ccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||||| ||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||    
T  2275070 ccgtccctgagaattcggaggctcggttctgggaatgaaaagaggccagtgataaaatcaaaacg 2275006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 16591990 - 16592058
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaac 905  Q
    ||||||||||| | |||||| ||||||||||||||||||||||||||||| || |||||||||||||||    
T  16591990 cagggccgtccttgagaatttggaggctcggctctgagaatgaaaagaggccaatgataaaatcaaaac 16592058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 929 - 1029
Target Start/End: Complemental strand, 30854428 - 30854328
Alignment:
Q  929 agcaatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacc 1027  Q
    |||||||||||||||||||||||       |||||| | ||||  ||||||||| ||||||||||| | |||||||||||||||||||||||||||||||    
T  30854428 agcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatg-cggtacactcagaggtgaaaatgactatcgtatacatgaggaacc 30854330  T
Q  1028 cc 1029  Q
    ||    
T  30854329 cc 30854328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 845 - 905
Target Start/End: Original strand, 34756289 - 34756349
Alignment:
Q  845 tccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaac 905  Q
    ||||| ||||||||||||||||||||||  |||||||||||| ||||||||||||||||||    
T  34756289 tccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaac 34756349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 837 - 906
Target Start/End: Original strand, 31881348 - 31881417
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||||||||| | ||||  |||||||||||||| |||||||||| ||||||| ||||||||||||||    
T  31881348 cagggccgtccctgaaaatttagaggctcggctctgggaatgaaaagtggtcagtaataaaatcaaaacg 31881417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 929 - 1029
Target Start/End: Original strand, 23284063 - 23284163
Alignment:
Q  929 agcaatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacc 1027  Q
    |||||||||||||||||||||||       |||||| | ||||| ||||||||| |||||||| ||||  |||||||||||| |||||||||||||||||    
T  23284063 agcaatgttctatttatattttttaaagactaaatacaaggtgtcgtatatatg-cggtacacccaaagatgaaaatgactaccgtatacatgaggaacc 23284161  T
Q  1028 cc 1029  Q
    ||    
T  23284162 cc 23284163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 929 - 1029
Target Start/End: Original strand, 28822343 - 28822443
Alignment:
Q  929 agcaatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacc 1027  Q
    |||||||||||||||||||||||       |||||||| ||||  ||||||||| |||||||| |||| ||||||||||||| ||||||||||| |||||    
T  28822343 agcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatg-cggtacacccaaaggtgaaaatgactaccgtatacatgatgaacc 28822441  T
Q  1028 cc 1029  Q
    ||    
T  28822442 cc 28822443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 840 - 906
Target Start/End: Complemental strand, 30854511 - 30854445
Alignment:
Q  840 ggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||||||| | |||| ||||||||||||||| ||||||||| ||||||| |||||||| ||||||    
T  30854511 ggccgtccctgataatttggaggctcggctctgggaatgaaaaaaggtcagcgataaaattaaaacg 30854445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 927 - 1029
Target Start/End: Original strand, 40389535 - 40389637
Alignment:
Q  927 aaagcaatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaa 1025  Q
    |||||||||||||||||||||||||       |||||||| ||||| |||||||| ||||||||  |||| ||||||||||||| |||||  ||||||||    
T  40389535 aaagcaatgttctatttatattttttaaaagataaatataaggtgtcgtatatat-gcggtacatccaaaggtgaaaatgactaccgtatttatgaggaa 40389633  T
Q  1026 cccc 1029  Q
    ||||    
T  40389634 cccc 40389637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 932 - 1029
Target Start/End: Original strand, 16799331 - 16799428
Alignment:
Q  932 aatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacccc 1029  Q
    ||||||||||||||||||||       |||||||| ||||  ||||||||| |||||||| |||| |||||||||| || |||||||||||||||||||    
T  16799331 aatgttctatttatattttttaaaaaataaatataaggtgccgtatatatg-cggtacacccaaaggtgaaaatgattaccgtatacatgaggaacccc 16799428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 837 - 906
Target Start/End: Original strand, 23283943 - 23284012
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||||||||| ||||||| ||||||| | | |  ||||||||||||| |||||||||||||||||||    
T  23283943 cagggccgtccctgagaattcagaggctcagttttaggaatgaaaagaggccagtgataaaatcaaaacg 23284012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 661 - 730
Target Start/End: Original strand, 25450743 - 25450812
Alignment:
Q  661 ttgattacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatgaagattgttaa 730  Q
    |||||||||| || || || ||| |||||||||||||||||| ||||||||||||||||  |||||||||    
T  25450743 ttgattacaacgaaatcttttcaccggtggtaaaacattgttctataagggtacttatggcgattgttaa 25450812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 929 - 1029
Target Start/End: Original strand, 16592075 - 16592175
Alignment:
Q  929 agcaatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacc 1027  Q
    ||||||||||||||||||||||        |||||| ||||||| ||||||||| |||||||| || | ||||||||||||| |||||| ||||||||||    
T  16592075 agcaatgttctatttatattttctaaaagataaatacagggtgtcgtatatatg-cggtacacccagaggtgaaaatgactaccgtatatatgaggaacc 16592173  T
Q  1028 cc 1029  Q
    ||    
T  16592174 cc 16592175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 929 - 1029
Target Start/End: Original strand, 34756367 - 34756467
Alignment:
Q  929 agcaatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacc 1027  Q
    |||||||||||||||||||||||       |||||| | ||||  ||||||||| |||||||| || | ||||||||||||| |||||||||||||||||    
T  34756367 agcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatg-cggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 34756465  T
Q  1028 cc 1029  Q
    ||    
T  34756466 cc 34756467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 851 - 906
Target Start/End: Complemental strand, 7338170 - 7338115
Alignment:
Q  851 agaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||| ||||||||||||||  ||||||||||||||||  |||||||||||||||    
T  7338170 agaatttggaggctcggctctaggaatgaaaagaggtcaaggataaaatcaaaacg 7338115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 556 - 745
Target Start/End: Original strand, 24558430 - 24558619
Alignment:
Q  556 ttggatgtaagtagatcttcaagaacaaagaaggtatttagagaattaaagaaccaaagtataaaacaagagttgtggctaagggtttttctcgggttaa 655  Q
    ||||||| |||| |||||||||||| || |||||||||  | || || |||  || | ||| ||| ||||| ||||||| ||||||||  |||  ||  |    
T  24558430 ttggatgcaagtggatcttcaagaaaaaggaaggtattccgggagttgaaggtcctaggtacaaagcaagacttgtggccaagggtttcactcaagtgga 24558529  T
Q  656 gagatttgattacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatgaagattgttaatcagtacaatcttga 745  Q
    | |  |||| ||||||||||| |||||| ||||||| ||||||||||  |||||| ||||||||   ||||| ||||| | |||||||||    
T  24558530 ggggattgactacaatgagatcttctcaccggtggtgaaacattgttccataaggatacttatggctattgtgaatcaattcaatcttga 24558619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 556 - 745
Target Start/End: Original strand, 24599462 - 24599651
Alignment:
Q  556 ttggatgtaagtagatcttcaagaacaaagaaggtatttagagaattaaagaaccaaagtataaaacaagagttgtggctaagggtttttctcgggttaa 655  Q
    ||||||| |||| |||||||||||| || |||||||||  | || || |||  || | ||| ||| ||||| ||||||| ||||||||  |||  ||  |    
T  24599462 ttggatgcaagtggatcttcaagaaaaaggaaggtattccgggagttgaaggtcctaggtacaaagcaagacttgtggccaagggtttcactcaagtgga 24599561  T
Q  656 gagatttgattacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatgaagattgttaatcagtacaatcttga 745  Q
    | |  |||| ||||||||||| |||||| ||||||| ||||||||||  |||||| ||||||||   ||||| ||||| | |||||||||    
T  24599562 ggggattgactacaatgagatcttctcaccggtggtgaaacattgttccataaggatacttatggctattgtgaatcaattcaatcttga 24599651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 984 - 1025
Target Start/End: Original strand, 36868932 - 36868973
Alignment:
Q  984 ggtacactcaaatgtgaaaatgactatcgtatacatgaggaa 1025  Q
    ||||||| ||||||||||||| |||| |||||||||||||||    
T  36868932 ggtacacccaaatgtgaaaatcactaccgtatacatgaggaa 36868973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 62; Significance: 3e-26; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 837 - 906
Target Start/End: Complemental strand, 1527 - 1458
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1527 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacg 1458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 3e-26; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 837 - 906
Target Start/End: Complemental strand, 47467872 - 47467803
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  47467872 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacg 47467803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 837 - 906
Target Start/End: Original strand, 50939152 - 50939221
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  50939152 cagggccgtccctaagaattcgggggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacg 50939221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 835 - 906
Target Start/End: Original strand, 48720427 - 48720498
Alignment:
Q  835 tacagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  48720427 tacagggccgtccctaagaattgggaggctcggctctgggaatgaaaagaggtaagtgataaaatcaaaacg 48720498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 836 - 906
Target Start/End: Original strand, 34290553 - 34290623
Alignment:
Q  836 acagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  34290553 acagggccgtccttaagaattcggaggctcggctctgggaatgaaaagaagtcagtgataaaatcaaaacg 34290623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 837 - 906
Target Start/End: Original strand, 8073257 - 8073326
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  8073257 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggtcagtgataaaatcaaaacg 8073326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 841 - 906
Target Start/End: Complemental strand, 37168551 - 37168486
Alignment:
Q  841 gccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  37168551 gccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacg 37168486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 837 - 906
Target Start/End: Original strand, 54407073 - 54407142
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||    
T  54407073 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccggtgataaaatcaaaacg 54407142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 837 - 899
Target Start/End: Original strand, 29620364 - 29620426
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaat 899  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  29620364 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaat 29620426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 837 - 906
Target Start/End: Complemental strand, 21582960 - 21582891
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||||||||| ||||||||||||||||||| || ||||||||||||| |||||||||||||||||||    
T  21582960 cagggccgtccctgagaattcggaggctcggctttgggaatgaaaagaggccagtgataaaatcaaaacg 21582891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 27078486 - 27078554
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaac 905  Q
    ||||||||||||| |||||||||||||| |||||||  |||||||||||||||||||||||||||||||    
T  27078486 cagggccgtccctgagaattcggaggcttggctctggaaatgaaaagaggtcagtgataaaatcaaaac 27078554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 27084283 - 27084351
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaac 905  Q
    ||||||||||||| |||||||||||||| |||||||  |||||||||||||||||||||||||||||||    
T  27084283 cagggccgtccctgagaattcggaggcttggctctggaaatgaaaagaggtcagtgataaaatcaaaac 27084351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 38681011 - 38681079
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaac 905  Q
    ||||||||||||| ||||||||||||||||||||||  |||||||||||| ||||||||||||||||||    
T  38681011 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaac 38681079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 836 - 906
Target Start/End: Original strand, 43207156 - 43207226
Alignment:
Q  836 acagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||| | ||||||    
T  43207156 acagggccgtccctaagaatttggaggctcggctctgggaatgaaaagaggccagtgataaattaaaaacg 43207226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 836 - 905
Target Start/End: Original strand, 36715941 - 36716010
Alignment:
Q  836 acagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaac 905  Q
    |||||||||||||| ||||||||||||||||||||||  |||||||||||| |||||||||||| |||||    
T  36715941 acagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaataaaaac 36716010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 841 - 906
Target Start/End: Complemental strand, 44708660 - 44708595
Alignment:
Q  841 gccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||||||||||||||||||||||  ||||| ||||||||||||| |||||||||||||||||||    
T  44708660 gccgtccctaagaattcggaggctcaactctgggaatgaaaagaggccagtgataaaatcaaaacg 44708595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 50258542 - 50258610
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaac 905  Q
    ||||||||| ||| |||||||||||||||||||||| ||| |||||||| |||||||||||||||||||    
T  50258542 cagggccgttcctgagaattcggaggctcggctctgggaacgaaaagagatcagtgataaaatcaaaac 50258610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 840 - 906
Target Start/End: Complemental strand, 36606149 - 36606083
Alignment:
Q  840 ggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||||||| | |||||||||| |||||||||  ||||||||||||||||||||||||||||||||    
T  36606149 ggccgtccctgaaaattcggaggttcggctctggaaatgaaaagaggtcagtgataaaatcaaaacg 36606083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 53506802 - 53506869
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaac 905  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||| ||||| ||||||||||||||||||    
T  53506802 cagggccgtcc-taagaattcgaaggctcggctctgggaatgaagagaggccagtgataaaatcaaaac 53506869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 837 - 905
Target Start/End: Original strand, 54619121 - 54619189
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaac 905  Q
    ||||||||||||| ||||||||||||||||||||||  |||||||||| | || |||||||||||||||    
T  54619121 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaagccaatgataaaatcaaaac 54619189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 932 - 1031
Target Start/End: Original strand, 8073345 - 8073444
Alignment:
Q  932 aatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacccca 1030  Q
    ||||||||||||||||||||       |||||| | ||||| ||||||||| |||||||| |||| ||||||||||||| ||||||||||||||||||||    
T  8073345 aatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatg-cggtacacccaaaagtgaaaatgactaccgtatacatgaggaacccca 8073443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 851 - 906
Target Start/End: Complemental strand, 18372656 - 18372601
Alignment:
Q  851 agaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||||||||||||| | ||| |||||||||||||||||||||||||||||||||    
T  18372656 agaattcggaggctcgacactgggaatgaaaagaggtcagtgataaaatcaaaacg 18372601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 843 - 905
Target Start/End: Complemental strand, 48157310 - 48157248
Alignment:
Q  843 cgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaac 905  Q
    ||||||||||||||||||||||||| || | |||| |||||||| ||||||||||||||||||    
T  48157310 cgtccctaagaattcggaggctcggttccgggaataaaaagaggccagtgataaaatcaaaac 48157248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 661 - 730
Target Start/End: Complemental strand, 10096001 - 10095932
Alignment:
Q  661 ttgattacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatgaagattgttaa 730  Q
    ||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||||  |||||||||    
T  10096001 ttgattacaatgaaatcttttcaccggtggtaaaacattgttctataagggtacttatggcgattgttaa 10095932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 661 - 730
Target Start/End: Complemental strand, 10202887 - 10202818
Alignment:
Q  661 ttgattacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatgaagattgttaa 730  Q
    ||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||||  |||||||||    
T  10202887 ttgattacaatgaaatcttttcaccggtggtaaaacattgttctataagggtacttatggcgattgttaa 10202818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 661 - 730
Target Start/End: Original strand, 10899995 - 10900064
Alignment:
Q  661 ttgattacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatgaagattgttaa 730  Q
    ||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||||  |||||||||    
T  10899995 ttgattacaatgaaatcttttcaccggtggtaaaacattgttctataagggtacttatggcgattgttaa 10900064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 929 - 1029
Target Start/End: Original strand, 9878691 - 9878791
Alignment:
Q  929 agcaatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacc 1027  Q
    |||||| ||||||||||||||||       |||||||| ||||  ||||||||| |||||||| |||| ||||||||||||||||||||||| |||||||    
T  9878691 agcaatattctatttatattttttaaaagataaatataaggtgcagtatatatg-cggtacacccaaaggtgaaaatgactatcgtatacataaggaacc 9878789  T
Q  1028 cc 1029  Q
    ||    
T  9878790 cc 9878791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 929 - 1029
Target Start/End: Original strand, 43207242 - 43207341
Alignment:
Q  929 agcaatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacc 1027  Q
    |||||||||||||||||||||||       |||||||| ||||  ||||||||| ||||||| ||||| ||||||||||||| |||||||||||||||||    
T  43207242 agcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatg-cggtaca-tcaaaggtgaaaatgactaccgtatacatgaggaacc 43207339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 926 - 1029
Target Start/End: Original strand, 34290637 - 34290740
Alignment:
Q  926 aaaagcaatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgagga 1024  Q
    |||| |||||||||||||||||||||       |||||||| ||||  ||||||||| |||||||| |||| ||||||||||||| |||||| |||||||    
T  34290637 aaaaacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatg-cggtacacccaaaggtgaaaatgactaccgtatatatgagga 34290735  T
Q  1025 acccc 1029  Q
    |||||    
T  34290736 acccc 34290740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 837 - 904
Target Start/End: Complemental strand, 42098989 - 42098922
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaa 904  Q
    ||||||||||||| |||||||| |||||| |||| |  |||||||||||| |||||||||||||||||    
T  42098989 cagggccgtccctgagaattcgaaggctcagctcgggaaatgaaaagaggccagtgataaaatcaaaa 42098922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 926 - 1029
Target Start/End: Complemental strand, 44708582 - 44708479
Alignment:
Q  926 aaaagcaatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgagga 1024  Q
    ||||| ||||||||||||||||||||       |||||||| ||||  ||||||||  |||||||| |||| ||||||||||||| ||||||||||||||    
T  44708582 aaaagaaatgttctatttatattttttaaaagataaatataaggtgccgtatatatc-cggtacacccaaaggtgaaaatgactaccgtatacatgagga 44708484  T
Q  1025 acccc 1029  Q
    |||||    
T  44708483 acccc 44708479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 838 - 904
Target Start/End: Original strand, 3953816 - 3953882
Alignment:
Q  838 agggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaa 904  Q
    |||||||||||| |||||||||||| || ||||||  |||||||||||| |||||||||||| ||||    
T  3953816 agggccgtccctgagaattcggaggttccgctctggaaatgaaaagaggccagtgataaaattaaaa 3953882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 661 - 719
Target Start/End: Complemental strand, 10609968 - 10609910
Alignment:
Q  661 ttgattacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatg 719  Q
    ||||||||||||| || || ||| |||||||||||||||||| ||||||||||||||||    
T  10609968 ttgattacaatgaaatcttttcaccggtggtaaaacattgttctataagggtacttatg 10609910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 661 - 731
Target Start/End: Complemental strand, 47880084 - 47880014
Alignment:
Q  661 ttgattacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatgaagattgttaat 731  Q
    ||||||||||||| || || ||| || ||||||||||||||| ||||||||||||||||  ||||||||||    
T  47880084 ttgattacaatgaaatcttttcaccgatggtaaaacattgttctataagggtacttatggcgattgttaat 47880014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 661 - 730
Target Start/End: Original strand, 16460450 - 16460519
Alignment:
Q  661 ttgattacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatgaagattgttaa 730  Q
    ||||||||||||| || || ||| |||| ||||||||||||| ||||||||||||||||  |||||||||    
T  16460450 ttgattacaatgaaatcttttcaccggtagtaaaacattgttctataagggtacttatggcgattgttaa 16460519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 661 - 730
Target Start/End: Original strand, 54191494 - 54191563
Alignment:
Q  661 ttgattacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatgaagattgttaa 730  Q
    ||||||||||||| || || ||| ||||||| |||||||||| ||||||||||||||||  |||||||||    
T  54191494 ttgattacaatgaaatcttttcaccggtggtgaaacattgttctataagggtacttatggcgattgttaa 54191563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 929 - 1029
Target Start/End: Original strand, 54619207 - 54619307
Alignment:
Q  929 agcaatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacc 1027  Q
    |||||||||||||||||||||||       |||||| | ||||  ||||||||| |||||||| || | ||||||||||||| |||||||||||||||||    
T  54619207 agcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatg-cggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 54619305  T
Q  1028 cc 1029  Q
    ||    
T  54619306 cc 54619307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 926 - 1029
Target Start/End: Original strand, 53506885 - 53506988
Alignment:
Q  926 aaaagcaatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgagga 1024  Q
    |||| |||||||||||||||||||||       |||||||| |||   ||||||||| |||||||| |||| ||||||||||||| |||||||||||| |    
T  53506885 aaaaacaatgttctatttatattttttaaaagataaatataaggtaccgtatatatg-cggtacacccaaaggtgaaaatgactaccgtatacatgagaa 53506983  T
Q  1025 acccc 1029  Q
    |||||    
T  53506984 acccc 53506988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 840 - 906
Target Start/End: Original strand, 53149235 - 53149301
Alignment:
Q  840 ggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||| || ||||||||||||||| | || | ||||||||||||  |||||||||||||||||||    
T  53149235 ggccgtctctgagaattcggaggctcagttcggggaatgaaaagagaccagtgataaaatcaaaacg 53149301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 980 - 1029
Target Start/End: Complemental strand, 48157190 - 48157141
Alignment:
Q  980 tggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacccc 1029  Q
    ||||||||||| |||| |||||||||||||  ||||||||||||||||||    
T  48157190 tggcggtacacccaaaggtgaaaatgactactgtatacatgaggaacccc 48157141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 973 - 1029
Target Start/End: Complemental strand, 21582828 - 21582773
Alignment:
Q  973 gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacccc 1029  Q
    ||||||||| |||||||| || | ||||||||||||| |||||||||||||||||||    
T  21582828 gtatatatg-cggtacacccagaggtgaaaatgactaccgtatacatgaggaacccc 21582773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 973 - 1029
Target Start/End: Complemental strand, 42098858 - 42098803
Alignment:
Q  973 gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacccc 1029  Q
    ||||||||| ||||| ||||| | ||||||||||||| |||||||||||||||||||    
T  42098858 gtatatatg-cggtatactcagaggtgaaaatgactaccgtatacatgaggaacccc 42098803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 926 - 1029
Target Start/End: Original strand, 50939234 - 50939337
Alignment:
Q  926 aaaagcaatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgagga 1024  Q
    |||||||||| |||||||||||||||       |||||||| ||||  ||||||||   ||||||| |||| || |||||||||| ||||||||||||||    
T  50939234 aaaagcaatgatctatttatattttttaaaagataaatataaggtgccgtatatatat-ggtacacccaaaggtaaaaatgactaccgtatacatgagga 50939332  T
Q  1025 acccc 1029  Q
    |||||    
T  50939333 acccc 50939337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 873 - 906
Target Start/End: Original strand, 9878642 - 9878675
Alignment:
Q  873 agaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    |||||||||||||||||||||||||||| |||||    
T  9878642 agaatgaaaagaggtcagtgataaaatctaaacg 9878675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 926 - 1019
Target Start/End: Original strand, 54407159 - 54407252
Alignment:
Q  926 aaaagcaatgttctatttatatttttnnnnnnntaaatatagggtg-tgtatatatggcggtacactcaaatgtgaaaatgactatcgtatacat 1019  Q
    |||| |||||||||||||||||||||       |||||||| ||||  |||||||| ||||||||  |||| ||||||||||||| |||||||||    
T  54407159 aaaaacaatgttctatttatattttttaaaagataaatataaggtgccgtatatat-gcggtacatccaaaggtgaaaatgactaccgtatacat 54407252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 60; Significance: 5e-25; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 836 - 1029
Target Start/End: Complemental strand, 106724 - 106537
Alignment:
Q  836 acagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacgnnnnnnnnnnnnnnnnnnnaaaagcaatg 935  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||                   || | |||||    
T  106724 acagggccgtccctaagaatttggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacg------tatttttttttaaaagaacaatg 106631  T
Q  936 ttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacccc 1029  Q
    ||||||||||||||||       |||||||| ||||| |||||||| ||||||||| |||| ||||||||||||| |||||||||||||||||||    
T  106630 ttctatttatattttttaaaagataaatataaggtgtcgtatatat-gcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccc 106537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 47; Significance: 3e-17; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 661 - 731
Target Start/End: Complemental strand, 338 - 268
Alignment:
Q  661 ttgattacaatgagattttctcatcggtggtaaaacattgttttataagggtacttatgaagattgttaat 731  Q
    ||||||||||||| ||||| ||| |||||||||||||||||| ||||||||||||||||  ||||||||||    
T  338 ttgattacaatgaaattttttcaccggtggtaaaacattgttctataagggtacttatggcgattgttaat 268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 46; Significance: 1e-16; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 837 - 906
Target Start/End: Complemental strand, 183244 - 183175
Alignment:
Q  837 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacg 906  Q
    ||||||||||||| | ||||| |||||||||||||| ||||||||||||| |||||||||||| ||||||    
T  183244 cagggccgtccctgaaaattcagaggctcggctctgggaatgaaaagaggccagtgataaaattaaaacg 183175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1320 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 986 - 1027
Target Start/End: Complemental strand, 1396 - 1355
Alignment:
Q  986 tacactcaaatgtgaaaatgactatcgtatacatgaggaacc 1027  Q
    ||||| ||||||||||||| ||||||||||||||||||||||    
T  1396 tacacccaaatgtgaaaatcactatcgtatacatgaggaacc 1355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1590 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 931 - 1027
Target Start/End: Original strand, 264 - 360
Alignment:
Q  931 caatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgaggaacc 1027  Q
    |||||||||||||| ||||||       |||||| | ||||| ||||||||| |||||||| ||||||||||||| |||| ||||||||||| |||||    
T  264 caatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatg-cggtacacccaaatgtgaaaatcactaccgtatacatgatgaacc 360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0559 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 673 - 719
Target Start/End: Original strand, 4835 - 4881
Alignment:
Q  673 agattttctcatcggtggtaaaacattgttttataagggtacttatg 719  Q
    ||||||||||| | ||| ||||||||||||| |||||||||||||||    
T  4835 agattttctcaccagtgttaaaacattgtttaataagggtacttatg 4881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 926 - 1027
Target Start/End: Complemental strand, 39027 - 38926
Alignment:
Q  926 aaaagcaatgttctatttatatttttnnnnnnntaaatatagggtgt-gtatatatggcggtacactcaaatgtgaaaatgactatcgtatacatgagga 1024  Q
    |||| |||||||||||||| ||||||       |||||| | ||||| ||||||||| || ||||| ||||||||||||| |||| |||||| |||||||    
T  39027 aaaaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatg-cgatacacacaaatgtgaaaatcactaccgtatatatgagga 38929  T
Q  1025 acc 1027  Q
    |||    
T  38928 acc 38926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University